View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16291_low_13 (Length: 248)
Name: NF16291_low_13
Description: NF16291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16291_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3088533 - 3088299
Alignment:
| Q |
1 |
aggttgagctttcttaataaagagaaaaagtcattcaaagccagctttaattttaatattatttcagcatgttcttcgtttctttggatttgnnnnnnnn |
100 |
Q |
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|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3088533 |
aggttgagcttttttaataaacagaaaaagtcattcaaagccagctttaattttaatattatttcagcatgttcttcgtttctttggatttttattttta |
3088434 |
T |
|
| Q |
101 |
nnnnnnn------accttaaccattttaaaattgtattttttctataaaagcataggcttagatcccttgtttttcaagcaaatatatagcaacttaagt |
194 |
Q |
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|||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
3088433 |
tttttatttttttaccttaactattttaaaattgtattttttctataaaagcaaaggctttgatcccttgtttttcaagcaaatatatagcaacttaagt |
3088334 |
T |
|
| Q |
195 |
ttcatcaaagatgagttactttgttgataaaaagc |
229 |
Q |
| |
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||||||||||||||||||||||||||||||||||| |
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| T |
3088333 |
ttcatcaaagatgagttactttgttgataaaaagc |
3088299 |
T |
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