View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1629_low_14 (Length: 277)

Name: NF1629_low_14
Description: NF1629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1629_low_14
NF1629_low_14
[»] chr1 (51 HSPs)
chr1 (75-264)||(5903382-5903572)
chr1 (1-73)||(50005164-50005236)
chr1 (9-82)||(26501086-26501159)
chr1 (5-77)||(15034657-15034729)
chr1 (5-77)||(23536065-23536137)
chr1 (1-73)||(40264115-40264187)
chr1 (5-75)||(15034748-15034818)
chr1 (5-75)||(30190225-30190295)
chr1 (5-77)||(4038073-4038145)
chr1 (1-73)||(38277500-38277571)
chr1 (12-79)||(29446746-29446813)
chr1 (1-75)||(6470685-6470759)
chr1 (5-75)||(24273223-24273293)
chr1 (5-71)||(27804269-27804335)
chr1 (5-75)||(34756427-34756497)
chr1 (5-83)||(45565386-45565464)
chr1 (1-74)||(32573007-32573080)
chr1 (1-73)||(34756512-34756584)
chr1 (8-79)||(27935577-27935648)
chr1 (9-76)||(32287940-32288007)
chr1 (21-79)||(8224764-8224822)
chr1 (5-79)||(43622981-43623055)
chr1 (5-75)||(47165215-47165285)
chr1 (18-77)||(27804367-27804426)
chr1 (9-72)||(37036956-37037019)
chr1 (11-78)||(44410406-44410473)
chr1 (5-75)||(4038164-4038234)
chr1 (5-75)||(44410311-44410381)
chr1 (12-73)||(28745799-28745860)
chr1 (5-78)||(38277412-38277485)
chr1 (75-134)||(5907252-5907311)
chr1 (1-52)||(37214842-37214893)
chr1 (17-79)||(28632600-28632662)
chr1 (5-75)||(32647301-32647371)
chr1 (8-77)||(31166308-31166377)
chr1 (5-78)||(49659214-49659286)
chr1 (5-77)||(50005077-50005149)
chr1 (40-79)||(41823180-41823219)
chr1 (1-75)||(25889158-25889231)
chr1 (5-63)||(31195468-31195526)
chr1 (30-72)||(51847855-51847897)
chr1 (5-70)||(28745885-28745950)
chr1 (5-66)||(44570687-44570748)
chr1 (35-78)||(5474414-5474457)
chr1 (40-79)||(15245456-15245495)
chr1 (20-75)||(32652206-32652261)
chr1 (40-79)||(45565500-45565539)
chr1 (40-75)||(48953587-48953622)
chr1 (21-75)||(946376-946429)
chr1 (6-75)||(49216342-49216412)
chr1 (21-66)||(37448420-37448465)
[»] chr7 (45 HSPs)
chr7 (1-75)||(29065904-29065978)
chr7 (5-78)||(5644674-5644747)
chr7 (5-77)||(29065817-29065889)
chr7 (4-75)||(5644765-5644836)
chr7 (9-75)||(6498758-6498824)
chr7 (5-78)||(2057392-2057465)
chr7 (5-78)||(31632719-31632792)
chr7 (5-77)||(40110735-40110807)
chr7 (18-78)||(43955514-43955574)
chr7 (18-77)||(30524253-30524312)
chr7 (5-75)||(26162126-26162196)
chr7 (6-83)||(34398938-34399016)
chr7 (5-79)||(40110827-40110901)
chr7 (5-74)||(9784920-9784989)
chr7 (5-78)||(35776944-35777017)
chr7 (1-77)||(21635883-21635959)
chr7 (5-73)||(43955603-43955671)
chr7 (5-75)||(23548600-23548670)
chr7 (5-75)||(28539157-28539227)
chr7 (18-78)||(14603264-14603324)
chr7 (5-77)||(29639204-29639276)
chr7 (5-77)||(39342631-39342703)
chr7 (5-75)||(34388354-34388424)
chr7 (18-75)||(2057497-2057554)
chr7 (18-75)||(35455804-35455861)
chr7 (9-77)||(25189219-25189287)
chr7 (12-75)||(46482041-46482104)
chr7 (5-75)||(18789235-18789305)
chr7 (5-71)||(23455236-23455302)
chr7 (28-77)||(29195707-29195756)
chr7 (5-78)||(44915192-44915265)
chr7 (8-79)||(40854061-40854133)
chr7 (5-55)||(22391576-22391626)
chr7 (8-69)||(21635977-21636038)
chr7 (46-83)||(30080813-30080850)
chr7 (1-73)||(46069476-46069545)
chr7 (8-77)||(49052784-49052852)
chr7 (5-49)||(43791116-43791160)
chr7 (5-44)||(46069422-46069461)
chr7 (5-71)||(49052874-49052937)
chr7 (21-71)||(30629061-30629111)
chr7 (12-78)||(46481943-46482009)
chr7 (40-77)||(31913234-31913271)
chr7 (5-78)||(34388262-34388335)
chr7 (18-66)||(22351874-22351922)
[»] chr3 (45 HSPs)
chr3 (5-79)||(44692911-44692985)
chr3 (5-82)||(27251983-27252060)
chr3 (5-80)||(44436253-44436328)
chr3 (5-75)||(46672805-46672875)
chr3 (18-79)||(49457339-49457400)
chr3 (5-77)||(9129433-9129505)
chr3 (5-77)||(9137540-9137612)
chr3 (1-75)||(46429481-46429555)
chr3 (5-78)||(34088568-34088641)
chr3 (5-82)||(47767425-47767502)
chr3 (5-84)||(21307534-21307613)
chr3 (5-75)||(28092214-28092284)
chr3 (5-75)||(36397991-36398061)
chr3 (21-79)||(42005971-42006029)
chr3 (1-75)||(47284311-47284385)
chr3 (18-75)||(44692822-44692879)
chr3 (5-76)||(5415782-5415853)
chr3 (1-56)||(31070491-31070546)
chr3 (5-67)||(19475824-19475886)
chr3 (5-67)||(31070415-31070476)
chr3 (21-79)||(35279920-35279978)
chr3 (5-75)||(37054394-37054464)
chr3 (5-75)||(48947605-48947675)
chr3 (5-78)||(53129845-53129918)
chr3 (19-78)||(671635-671694)
chr3 (8-75)||(39110394-39110461)
chr3 (19-78)||(46001361-46001420)
chr3 (5-75)||(5415872-5415942)
chr3 (19-77)||(7302344-7302402)
chr3 (1-79)||(42130688-42130766)
chr3 (6-72)||(52527039-52527105)
chr3 (1-73)||(39215923-39215995)
chr3 (18-77)||(9129342-9129401)
chr3 (18-77)||(9137449-9137508)
chr3 (18-69)||(44288474-44288525)
chr3 (5-75)||(53470431-53470501)
chr3 (6-75)||(31189400-31189469)
chr3 (40-77)||(54761583-54761620)
chr3 (5-57)||(30766571-30766623)
chr3 (21-56)||(7976567-7976602)
chr3 (40-75)||(26547049-26547084)
chr3 (5-75)||(37321550-37321620)
chr3 (40-77)||(332081-332118)
chr3 (40-77)||(9007474-9007511)
chr3 (5-42)||(44436347-44436384)
[»] chr6 (19 HSPs)
chr6 (1-77)||(9763097-9763173)
chr6 (9-85)||(34244987-34245063)
chr6 (9-75)||(29889441-29889507)
chr6 (5-78)||(28918162-28918235)
chr6 (5-73)||(6919710-6919778)
chr6 (8-75)||(9285647-9285714)
chr6 (18-79)||(6919809-6919870)
chr6 (5-75)||(1368477-1368547)
chr6 (18-79)||(8574767-8574828)
chr6 (5-73)||(9763014-9763082)
chr6 (5-75)||(13487275-13487345)
chr6 (5-71)||(15299514-15299579)
chr6 (18-75)||(776080-776137)
chr6 (18-75)||(8574695-8574752)
chr6 (5-78)||(776169-776242)
chr6 (5-62)||(15299412-15299469)
chr6 (5-71)||(15832470-15832536)
chr6 (35-75)||(33733432-33733472)
chr6 (46-78)||(1195348-1195380)
[»] chr4 (45 HSPs)
chr4 (5-77)||(41498579-41498651)
chr4 (5-75)||(49111401-49111471)
chr4 (1-73)||(10127976-10128048)
chr4 (1-78)||(15660180-15660257)
chr4 (7-75)||(4896648-4896716)
chr4 (5-84)||(1112596-1112675)
chr4 (5-67)||(1539649-1539711)
chr4 (9-79)||(7352905-7352975)
chr4 (21-75)||(14982280-14982334)
chr4 (1-79)||(26250905-26250983)
chr4 (5-75)||(31473849-31473919)
chr4 (5-78)||(36456015-36456088)
chr4 (18-74)||(4441338-4441394)
chr4 (5-73)||(7352814-7352882)
chr4 (8-75)||(857331-857398)
chr4 (5-72)||(10633035-10633102)
chr4 (8-75)||(15660275-15660342)
chr4 (6-73)||(31742778-31742845)
chr4 (26-76)||(31742874-31742924)
chr4 (5-75)||(36455907-36455977)
chr4 (5-78)||(4896721-4896794)
chr4 (5-70)||(28845876-28845941)
chr4 (5-90)||(52493911-52493994)
chr4 (1-73)||(42844628-42844700)
chr4 (8-75)||(10128066-10128133)
chr4 (8-75)||(28845963-28846030)
chr4 (5-75)||(2125857-2125927)
chr4 (5-75)||(11040968-11041037)
chr4 (18-80)||(11348339-11348401)
chr4 (21-75)||(16516171-16516225)
chr4 (5-77)||(42844541-42844613)
chr4 (5-75)||(35470122-35470192)
chr4 (5-75)||(55266864-55266934)
chr4 (26-75)||(467912-467960)
chr4 (18-75)||(1107154-1107211)
chr4 (28-73)||(42542979-42543024)
chr4 (5-75)||(1112711-1112781)
chr4 (9-75)||(5715744-5715810)
chr4 (8-79)||(1107047-1107119)
chr4 (9-73)||(19461743-19461807)
chr4 (5-77)||(42776635-42776707)
chr4 (1-33)||(46724209-46724241)
chr4 (40-83)||(21012596-21012639)
chr4 (6-42)||(21012499-21012535)
chr4 (5-77)||(41139473-41139543)
[»] chr2 (37 HSPs)
chr2 (5-75)||(41461604-41461674)
chr2 (5-77)||(14365698-14365770)
chr2 (5-75)||(11716408-11716478)
chr2 (18-75)||(14365801-14365858)
chr2 (8-77)||(17180295-17180364)
chr2 (5-77)||(27033488-27033560)
chr2 (5-76)||(14537198-14537269)
chr2 (5-78)||(10480116-10480189)
chr2 (1-78)||(41461512-41461589)
chr2 (18-78)||(11684596-11684656)
chr2 (5-75)||(784882-784952)
chr2 (5-78)||(33189260-33189333)
chr2 (12-77)||(39630223-39630288)
chr2 (5-77)||(769034-769106)
chr2 (18-78)||(3092279-3092339)
chr2 (5-77)||(11141303-11141375)
chr2 (5-73)||(11532256-11532324)
chr2 (5-73)||(11793897-11793965)
chr2 (8-78)||(784790-784860)
chr2 (5-75)||(1583812-1583882)
chr2 (18-67)||(11716501-11716550)
chr2 (5-78)||(17905651-17905724)
chr2 (5-73)||(44256196-44256263)
chr2 (9-72)||(28740599-28740662)
chr2 (5-75)||(13017779-13017849)
chr2 (5-67)||(30698289-30698351)
chr2 (5-75)||(35047682-35047752)
chr2 (21-77)||(7228031-7228087)
chr2 (18-77)||(14954264-14954323)
chr2 (18-80)||(10244172-10244234)
chr2 (21-75)||(45094490-45094544)
chr2 (40-77)||(11684696-11684733)
chr2 (5-75)||(8735844-8735914)
chr2 (5-39)||(11595355-11595389)
chr2 (5-78)||(11606710-11606783)
chr2 (5-49)||(7167670-7167714)
chr2 (1-33)||(27033575-27033607)
[»] chr8 (46 HSPs)
chr8 (8-79)||(40046800-40046871)
chr8 (18-75)||(33902667-33902724)
chr8 (1-73)||(13404829-13404901)
chr8 (9-75)||(515549-515615)
chr8 (5-75)||(3853616-3853686)
chr8 (5-75)||(3858074-3858144)
chr8 (8-78)||(17110866-17110936)
chr8 (5-75)||(17110958-17111028)
chr8 (9-79)||(36103097-36103167)
chr8 (1-75)||(37268092-37268166)
chr8 (9-75)||(44889354-44889420)
chr8 (18-75)||(28324688-28324745)
chr8 (5-78)||(33986001-33986074)
chr8 (8-77)||(42711372-42711441)
chr8 (1-73)||(3853701-3853773)
chr8 (1-73)||(3858159-3858231)
chr8 (1-57)||(40046875-40046931)
chr8 (18-69)||(8689138-8689189)
chr8 (5-79)||(33377310-33377384)
chr8 (5-81)||(14233-14308)
chr8 (17-77)||(14991690-14991750)
chr8 (5-77)||(23011732-23011804)
chr8 (10-77)||(1088295-1088362)
chr8 (5-72)||(35979017-35979084)
chr8 (5-75)||(24044960-24045030)
chr8 (5-75)||(29257364-29257434)
chr8 (18-75)||(14800062-14800119)
chr8 (5-73)||(29482820-29482888)
chr8 (18-73)||(4156269-4156324)
chr8 (12-71)||(30435250-30435309)
chr8 (12-75)||(31807409-31807471)
chr8 (5-71)||(44346691-44346757)
chr8 (8-57)||(13404919-13404968)
chr8 (6-57)||(8049272-8049323)
chr8 (30-77)||(27322687-27322734)
chr8 (27-78)||(32626069-32626120)
chr8 (5-75)||(9982637-9982706)
chr8 (40-78)||(30444963-30445001)
chr8 (18-79)||(33902769-33902829)
chr8 (40-77)||(42739947-42739984)
chr8 (1-33)||(42740016-42740048)
chr8 (40-75)||(7202934-7202969)
chr8 (40-79)||(14799975-14800014)
chr8 (40-77)||(7202863-7202900)
chr8 (5-77)||(11744732-11744804)
chr8 (55-83)||(16024377-16024405)
[»] chr5 (54 HSPs)
chr5 (12-79)||(40643913-40643980)
chr5 (6-84)||(32470873-32470951)
chr5 (5-73)||(2721560-2721628)
chr5 (5-73)||(19533907-19533975)
chr5 (1-73)||(28828432-28828504)
chr5 (5-88)||(9764427-9764510)
chr5 (18-77)||(15374062-15374121)
chr5 (5-75)||(15373960-15374030)
chr5 (5-75)||(37722894-37722964)
chr5 (5-78)||(25935290-25935363)
chr5 (5-78)||(40090414-40090487)
chr5 (18-77)||(2316376-2316435)
chr5 (5-84)||(9764329-9764408)
chr5 (8-75)||(15804322-15804389)
chr5 (18-77)||(23092064-23092123)
chr5 (12-78)||(6634012-6634078)
chr5 (5-75)||(22303870-22303940)
chr5 (5-75)||(22766952-22767022)
chr5 (5-75)||(26281269-26281339)
chr5 (5-79)||(41762215-41762289)
chr5 (5-78)||(927299-927372)
chr5 (5-74)||(3563278-3563347)
chr5 (9-78)||(10314646-10314715)
chr5 (5-74)||(20523222-20523291)
chr5 (20-73)||(28828369-28828422)
chr5 (18-77)||(32250111-32250169)
chr5 (18-73)||(32389974-32390029)
chr5 (8-79)||(40809337-40809408)
chr5 (5-75)||(2316468-2316537)
chr5 (5-75)||(20523133-20523203)
chr5 (18-80)||(33245385-33245447)
chr5 (30-79)||(5658772-5658821)
chr5 (5-78)||(16515107-16515180)
chr5 (5-78)||(32390061-32390134)
chr5 (18-79)||(34982212-34982272)
chr5 (21-73)||(15804399-15804451)
chr5 (5-73)||(37145501-37145569)
chr5 (18-73)||(20320661-20320716)
chr5 (5-71)||(9894322-9894388)
chr5 (20-79)||(13243453-13243514)
chr5 (5-71)||(16515009-16515074)
chr5 (18-75)||(35379344-35379400)
chr5 (40-77)||(15270871-15270908)
chr5 (18-75)||(23091963-23092019)
chr5 (5-73)||(14834826-14834894)
chr5 (19-75)||(40809444-40809500)
chr5 (40-79)||(2550324-2550363)
chr5 (26-73)||(13243514-13243561)
chr5 (40-75)||(34982313-34982348)
chr5 (11-74)||(37090282-37090345)
chr5 (11-69)||(8255033-8255091)
chr5 (40-78)||(22305109-22305147)
chr5 (8-49)||(32470974-32471015)
chr5 (46-75)||(34105089-34105118)
[»] scaffold0009 (2 HSPs)
scaffold0009 (5-75)||(41997-42067)
scaffold0009 (18-77)||(42080-42139)
[»] scaffold1562 (2 HSPs)
scaffold1562 (5-73)||(494-562)
scaffold1562 (18-83)||(397-462)
[»] scaffold1158 (2 HSPs)
scaffold1158 (5-73)||(2031-2099)
scaffold1158 (18-83)||(2131-2196)
[»] scaffold0169 (1 HSPs)
scaffold0169 (5-79)||(4071-4145)
[»] scaffold0048 (1 HSPs)
scaffold0048 (5-73)||(82945-83013)
[»] scaffold0301 (1 HSPs)
scaffold0301 (18-73)||(7153-7208)
[»] scaffold0129 (2 HSPs)
scaffold0129 (5-79)||(19194-19267)
scaffold0129 (5-73)||(19788-19855)
[»] scaffold0400 (1 HSPs)
scaffold0400 (5-74)||(4501-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (5-74)||(5145-5214)
[»] scaffold0027 (1 HSPs)
scaffold0027 (9-74)||(10887-10952)
[»] scaffold0318 (1 HSPs)
scaffold0318 (12-75)||(2867-2930)
[»] scaffold0044 (2 HSPs)
scaffold0044 (5-71)||(56363-56429)
scaffold0044 (5-44)||(56305-56344)


Alignment Details
Target: chr1 (Bit Score: 163; Significance: 4e-87; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 75 - 264
Target Start/End: Original strand, 5903382 - 5903572
Alignment:
Q  75 ttaggcttttcaaaatcacaagtcacatttcgaaagatccttagattattcaagttcaatcgcatccttctcaatcaaatgcaat-cagatggcgctact 173  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  5903382 ttaggcttttcaaaatcacaagtcacatttcgaaagatcctaagattattcaagttcaatcgcatcctcctcgatcaaatgcaattcagatggcgctact 5903481  T
Q  174 agatgcaatccgaaattggcagctagtggtggcatctttagtgagagactccatggcttctttcttggagttgtttcactaatcacattga 264  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5903482 agatgcaatccgaaattggcagctagtggtggcatctttagcgagagactccatggcttctttcatggagttgtttcactaatcacattga 5903572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50005164 - 50005236
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  50005164 aatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 26501086 - 26501159
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggctt 82  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  26501086 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttatgctt 26501159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 15034729 - 15034657
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15034729 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 23536137 - 23536065
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  23536137 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40264115 - 40264187
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||    
T  40264115 aatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15034748 - 15034818
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  15034748 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 30190225 - 30190295
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  30190225 cacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 4038145 - 4038073
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  4038145 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38277500 - 38277571
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||    
T  38277500 aatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcc-ccatccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 29446813 - 29446746
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||    
T  29446813 aaatagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttagg 29446746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6470685 - 6470759
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||  | ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  6470685 aatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 24273223 - 24273293
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  24273223 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 27804335 - 27804269
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  27804335 cacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 34756497 - 34756427
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||    
T  34756497 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctct 34756427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 45565464 - 45565386
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggcttt 83  Q
    ||||| |||||| ||||||||||||||||||||||||||  |||||||||||| |||||||||||||| || |||||||    
T  45565464 caccttaaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacaccctaaggcttt 45565386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32573007 - 32573080
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    |||||||||||||| ||||||||||||||||||||||||||| | |||||| ||||| |||||||| |||||||    
T  32573007 aatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34756512 - 34756584
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||||| ||| | |||||||||||||||    
T  34756512 aatccacctcaaaataattgaattccctcaaaacattatattacctcaaaatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 27935577 - 27935648
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||| || ||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  27935577 ctcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttagg 27935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 32287940 - 32288007
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctt 76  Q
    ||||| || ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  32287940 tcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 8224822 - 8224764
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  8224822 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagg 8224764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 43622981 - 43623055
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||| || || ||||  |||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  43622981 cacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttagg 43623055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 47165215 - 47165285
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  47165215 caccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 27804367 - 27804426
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||    
T  27804367 ttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 37036956 - 37037019
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacac 72  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||  |||||||||||||    
T  37036956 tcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 44410406 - 44410473
Alignment:
Q  11 aaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||||||||||||||||||||| ||||||| | |||||| ||||| | ||||||||||||||||||    
T  44410406 aaaataattgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttag 44410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 4038164 - 4038234
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || |||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||    
T  4038164 caccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 44410381 - 44410311
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||| |||||||| || ||||||||||||||| |||||||||||  ||||||||| |||||||    
T  44410381 cacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 28745860 - 28745799
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| |||||    
T  28745860 aaataattgaattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 38277485 - 38277412
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||| ||||||||||||||||| |||||| ||||   |||||||||||||||||||    
T  38277485 cacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 5907252 - 5907311
Alignment:
Q  75 ttaggcttttcaaaatcacaagtcacatttcgaaagatccttagattattcaagttcaat 134  Q
    |||||||||||| |||||||||||||||||  |||| ||||| |||||||||||||||||    
T  5907252 ttaggcttttcagaatcacaagtcacattttaaaagctccttggattattcaagttcaat 5907311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37214893 - 37214842
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaac 52  Q
    ||||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  37214893 aatccacctcaaaataattgaattctctcaaaacattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 28632600 - 28632662
Alignment:
Q  17 attgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||| |||||||||||||||||| || |||||||||  |||||||||||||| |||||    
T  28632600 attgaattctctcaaaacattacattccctccaaacattccctcatccaaacacactattagg 28632662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 32647371 - 32647301
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || ||||||| |||||||||| |||||| ||||||||||||||||| |||||| |||||||    
T  32647371 caccccaaagtatttgaatttcctcaaaacaatacatttcttcaaaacattcctccgtccaaatacactct 32647301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 31166377 - 31166308
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| ||| ||||| |||||||||||||||   ||||||||||||  ||||||||||||||||||    
T  31166377 ctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 49659286 - 49659214
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || || |||||||||  ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  49659286 cacctcaaagtatttaaattccctcgtaacattacattccctcaatacattcc-ccatccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 50005149 - 50005077
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||||  | |||||||| |||||||||||||||||  |||||| |||||  ||||||||||||||||||    
T  50005149 cacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactctta 50005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 41823180 - 41823219
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  41823180 attccttcaaaacattcccccatccaaacacactcttagg 41823219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25889231 - 25889158
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||||||| ||||||||||| ||| | |||||| |||||  ||||| || |||||||    
T  25889231 aatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcccaatacactct 25889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 31195526 - 31195468
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatc 63  Q
    |||||||||||| || |||| ||||| ||||||||||||| |||||| |||||||||||    
T  31195526 cacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcctccatc 31195468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 51847897 - 51847855
Alignment:
Q  30 aaaacattacattccttcaaaacattcctccatccaaacacac 72  Q
    ||||||||||||| | |||||||||||||||||||||||||||    
T  51847897 aaaacattacattacctcaaaacattcctccatccaaacacac 51847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 28745885 - 28745950
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacac 70  Q
    |||||||||||| |||||||||||||||| |||||||||| | |||| ||||   |||||||||||    
T  28745885 cacctcaaaatagttgaattccctcaaaatattacattcccttaaaatattctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 44570748 - 44570687
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaa 66  Q
    ||||||||  || ||||||||| ||||||||||||||||| |||||||||||  ||||||||    
T  44570748 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 5474457 - 5474414
Alignment:
Q  35 attacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactcttag 5474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 15245495 - 15245456
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactcttagg 15245456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 32652261 - 32652206
Alignment:
Q  20 gaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| |||||||||| |||||| | |||||||||| ||||||||||| |||||||    
T  32652261 gaatttcctcaaaacaatacatttcctcaaaacatttctccatccaaatacactct 32652206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 45565500 - 45565539
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  45565500 attccctcaaaacattcttccatccaaacacactcttagg 45565539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 48953622 - 48953587
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||| |||||||||||||||||    
T  48953622 attccttcaaaacattcccccatccaaacacactct 48953587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 946429 - 946376
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||| |||||||| ||||| |||| || ||||||||||||||||    
T  946429 aattccctcaaaacaatacattccctcaaagcatttct-catccaaacacactct 946376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 49216342 - 49216412
Alignment:
Q  6 acctcaaaataattgaattccctcaaaaca-ttacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||| || |||||||||||| ||||| |||| ||| ||||||||||| |  ||||||||||||||||    
T  49216342 acctcaaagtatttgaattccctcgaaacatttacgttctttcaaaacatttccacatccaaacacactct 49216412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 37448420 - 37448465
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaa 66  Q
    |||||||||||||||||||||||  ||||||||||||  |||||||    
T  37448420 aattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29065904 - 29065978
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  29065904 aatccacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 5644747 - 5644674
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  5644747 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 29065889 - 29065817
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  29065889 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 5644765 - 5644836
Alignment:
Q  4 ccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||    
T  5644765 ccacctcaaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 6498758 - 6498824
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6498758 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 2057465 - 2057392
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  2057465 cacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 31632792 - 31632719
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31632792 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactcttag 31632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 40110807 - 40110735
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  40110807 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 43955574 - 43955514
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  43955574 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 30524312 - 30524253
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  30524312 ttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactctta 30524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 26162126 - 26162196
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  26162126 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 34398938 - 34399016
Alignment:
Q  6 acctcaaaataattgaattc-cctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggcttt 83  Q
    |||||||| || |||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaaggcttt 34399016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40110827 - 40110901
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||| || ||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||    
T  40110827 cacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttagg 40110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 9784920 - 9784989
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    |||| |||| || |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  9784920 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 35776944 - 35777017
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||    
T  35776944 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21635959 - 21635883
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||  |||||||| ||||||||||    
T  21635959 aatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactctta 21635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 43955603 - 43955671
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  43955603 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 23548600 - 23548670
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  23548600 caccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 28539157 - 28539227
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  28539157 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 14603264 - 14603324
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  14603264 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 29639204 - 29639276
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||||||| ||||||| ||||| ||||||||||||| | |||||||||| ||||||| |||||||||||    
T  29639204 cacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 39342631 - 39342703
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  39342631 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 34388354 - 34388424
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || |||||||||||||||| |||||||||| ||||||||||||  ||| ||||||||||||    
T  34388354 cacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 2057497 - 2057554
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||    
T  2057497 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 35455861 - 35455804
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||    
T  35455861 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 25189219 - 25189287
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| || |||||||||||||||||||| |||| | ||||||||||||  ||||||||||||||||||    
T  25189219 tcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactctta 25189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 46482041 - 46482104
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| |||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  46482041 aaatagttgaattttctcaaaacattacattccttcaacacatttctccattcaaacacactct 46482104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 18789235 - 18789305
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||||||| ||||||| ||||  |||||| |||||||||||||||||||||||    
T  18789235 caccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 23455236 - 23455302
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    |||| |||| || |||||||||||||||||| |||||||| ||||||||||||  ||||||||||||    
T  23455236 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 29195756 - 29195707
Alignment:
Q  28 tcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 44915265 - 44915192
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||| |||||||||||| |||| |||||| ||||   |||||||||||||||||||    
T  44915265 cacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactcttag 44915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 40854061 - 40854133
Alignment:
Q  8 ctcaaaataattgaattccc-tcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||| || |||||||||| |||||| |||||||||| ||| |||||| | |||||||||||||||||||||    
T  40854061 ctcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactcttagg 40854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 22391576 - 22391626
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacatt 55  Q
    |||||||||||| || ||||| |||||||||||||||||| ||||||||||    
T  22391576 cacctcaaaatatttaaattctctcaaaacattacattccctcaaaacatt 22391626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 21635977 - 21636038
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaaca 69  Q
    |||||| || || |||||| ||||||||||||||||| |||||||||| | |||||||||||    
T  21635977 ctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 30080813 - 30080850
Alignment:
Q  46 tcaaaacattcctccatccaaacacactcttaggcttt 83  Q
    |||||||||||| |||||||||||||||||||||||||    
T  30080813 tcaaaacattcccccatccaaacacactcttaggcttt 30080850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 46069476 - 46069545
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||| ||||||||||||||||||||||  ||||||||||| | || ||| ||||| |||||||||||||||    
T  46069476 aatccatctcaaaataattgaattccctc--aacattacattacctc-aaatattcccccatccaaacacact 46069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 49052852 - 49052784
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||| || |||||||| |||||||||||||||||| ||||||||||    ||||||||||||||||||    
T  49052852 ctcaaagtagttgaattcactcaaaacattacattcc-tcaaaacattttctcatccaaacacactctta 49052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 43791160 - 43791116
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaa 49  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||    
T  43791160 cacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 46069461 - 46069422
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattcc 44  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  46069461 cacctcaaagtagttgaattccctcaaaacattacattcc 46069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 49052874 - 49052937
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    ||||| ||| || ||||||||||||||||||||||||||||   ||||||||| |||||||||||||    
T  49052874 caccttaaagtagttgaattccctcaaaacattacattcct--caaacattcc-ccatccaaacaca 49052937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 30629111 - 30629061
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    ||||| || |||||| |||||||| |||||||||||| |||||||||||||    
T  30629111 aattctcttaaaacaatacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 46482009 - 46481943
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||| || |||| |||||||||||||||||| ||| ||| |||   ||||||||||||||||||||    
T  46482009 aaatagttaaatttcctcaaaacattacattctttcgaaatattttcccatccaaacacactcttag 46481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 31913271 - 31913234
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactctta 31913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 34388335 - 34388262
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||| ||| || |||||||| |||| |||||||| || | |||||| ||| | ||||||||||||||||||||    
T  34388335 caccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaa 66  Q
    |||||||| |||||||||||||||| |  ||||||||||| ||||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 44692911 - 44692985
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44692911 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 44692985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 27251983 - 27252060
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggctt 82  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  27251983 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttaggctt 27252060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 44436328 - 44436253
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggc 80  Q
    ||||| |||||| ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  44436328 caccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactcttaggc 44436253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 46672805 - 46672875
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  46672805 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 49457400 - 49457339
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  49457400 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 49457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 9129433 - 9129505
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  9129433 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 9137540 - 9137612
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  9137540 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 46429481 - 46429555
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||||||| ||||||||||||||| | |||||| |||||  ||||||||||||||||    
T  46429481 aatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 34088641 - 34088568
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||| |||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  34088641 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 47767502 - 47767425
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggctt 82  Q
    ||||||||  || ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  47767502 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactctaaggctt 47767425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 21307534 - 21307613
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggctttt 84  Q
    ||||||||| || |||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | ||||| ||||    
T  21307534 cacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacacattattaggttttt 21307613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 28092284 - 28092214
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| |||||||||||||||||||||| ||||| | |||||||||||| ||||||||||| |||||    
T  28092284 cacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 36397991 - 36398061
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  36397991 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 42005971 - 42006029
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  42005971 aattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 42006029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 47284311 - 47284385
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| ||||||||||||||||||||||||||||||||||||| | |||||| ||||   ||||||||||||||||    
T  47284311 aatcaacctcaaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 44692879 - 44692822
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  44692879 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 5415853 - 5415782
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctt 76  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||    
T  5415853 caccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31070491 - 31070546
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattc 56  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  31070491 aatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 19475886 - 19475824
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaa 67  Q
    ||||||||| || ||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  19475886 cacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 31070476 - 31070415
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaa 67  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  31070476 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc-ccatccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 35279920 - 35279978
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacacattcttagg 35279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 37054464 - 37054394
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||  || ||||||||| ||||||||||||||||| | |||||||||| |||||||||||||||||    
T  37054464 cacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 48947675 - 48947605
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || |||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  48947675 caccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 53129845 - 53129918
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||| |||| || ||||||||||| ||||||||||||||| || |||||||||  |||||||||||||||||||    
T  53129845 caccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 671635 - 671694
Alignment:
Q  19 tgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||||||||||| |||||||| |||||||||||| | ||||||| ||||||||||    
T  671635 tgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactcttag 671694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 39110461 - 39110394
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| || |||||||||| |||||||||||||||  |||||||||| || ||||||||||||||||    
T  39110461 ctcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 46001420 - 46001361
Alignment:
Q  19 tgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||||| |||||||||||| | |||||| ||||| ||||||||||||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttag 46001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 5415872 - 5415942
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||| |||||||||||| |||| |||||| ||||| |||||||||||||||||    
T  5415872 caccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 7302402 - 7302344
Alignment:
Q  19 tgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||| ||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  7302402 tgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42130766 - 42130688
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||| | || ||||||||||||||||||||||||||||  | |||||| ||||| ||| ||||||||||| |||||    
T  42130766 aatccacttaaagataattgaattccctcaaaacattacatcacctcaaaatattcccccacccaaacacactattagg 42130688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 52527105 - 52527039
Alignment:
Q  6 acctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacac 72  Q
    |||||||| || |||||||||  || |||||||||| ||||||||||||||| ||||||||||||||    
T  52527105 acctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacacac 52527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39215923 - 39215995
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||||||||||  |||||||||||| ||| | |||||| ||||   ||||||||||||||    
T  39215923 aatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattctctcatccaaacacact 39215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 9129401 - 9129342
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| ||||||||||||||||| |||||| | ||  |||||||||||||||||||    
T  9129401 ttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 9137508 - 9137449
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| ||||||||||||||||| |||||| | ||  |||||||||||||||||||    
T  9137508 ttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 44288474 - 44288525
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaaca 69  Q
    ||||||||| ||||||||||| ||| | ||||||||||||||||||||||||    
T  44288474 ttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 53470431 - 53470501
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || |||||||||||||||||| || ||||| |||||||||| |  ||||||||||||||||    
T  53470431 caccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 31189400 - 31189469
Alignment:
Q  6 acctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||| || |||||||| |||||||||||||||| | |||||||||||   ||| ||||||||||||    
T  31189400 acctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 54761583 - 54761620
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  54761583 attccctcaaaacattcctccatccaaacacactctta 54761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30766623 - 30766571
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcc 57  Q
    ||||||||  || ||||||||| ||||||||||||||||| ||||||||||||    
T  30766623 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 7976602 - 7976567
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattc 56  Q
    |||||| |||||||||||||||||||||||||||||    
T  7976602 aattccttcaaaacattacattccttcaaaacattc 7976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 26547084 - 26547049
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||| |||||||||||||||||||||||    
T  26547084 attccttcaaaatattcctccatccaaacacactct 26547049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 37321620 - 37321550
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||| |||||||||||||| || | |||||| ||||| ||||||||| |||||||    
T  37321620 caccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 332081 - 332118
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  332081 attccctcaaaacattcttccatccaaacacactctta 332118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 9007474 - 9007511
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  9007474 attcgttcaaaacattcccccatccaaacacactctta 9007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 44436347 - 44436384
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacatt 42  Q
    ||||||||| || |||||||||||||||||||||||||    
T  44436347 cacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9763097 - 9763173
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  9763097 aatccacctcacaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 34244987 - 34245063
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggcttttc 85  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  34244987 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagggttttc 34245063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 29889441 - 29889507
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29889441 tcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 28918235 - 28918162
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28918235 cacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 6919778 - 6919710
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  6919778 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 9285714 - 9285647
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  9285714 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 6919809 - 6919870
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  6919809 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttagg 6919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 1368547 - 1368477
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||| | ||||||||||| |||| |||||||||  ||||||||||||||||||||||||||||||    
T  1368547 cacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 8574767 - 8574828
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||||||||||||||||||    
T  8574767 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttagg 8574828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 9763082 - 9763014
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||| | || ||||||||||||    
T  9763082 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 13487345 - 13487275
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||| |||| |||||||| |||||||||||| ||||| |||||||||||    
T  13487345 cacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 15299514 - 15299579
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    ||||||||| || ||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  15299514 cacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattcc-ccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 776137 - 776080
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  776137 ttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 8574752 - 8574695
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||||||||||||||    
T  8574752 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 776169 - 776242
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||| ||| || ||||||| ||||||||||||||||||| ||||||||||   | ||||||||||||||||||    
T  776169 caccttaaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactcttag 776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 15299469 - 15299412
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccat 62  Q
    ||||||||| || |||||||| |||||||||||||||||  |||||||||||||||||    
T  15299469 cacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcctccat 15299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 15832536 - 15832470
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    |||| |||| || ||||||||||| |||||||||||||||||| ||||||| |  ||||||||||||    
T  15832536 caccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacaca 15832470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  35 attacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 1195380 - 1195348
Alignment:
Q  46 tcaaaacattcctccatccaaacacactcttag 78  Q
    |||||||||||| ||||||||||||||||||||    
T  1195380 tcaaaacattcccccatccaaacacactcttag 1195348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 41498579 - 41498651
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  41498579 cacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 49111401 - 49111471
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  49111401 cacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10128048 - 10127976
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||||||    
T  10128048 aatccacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15660257 - 15660180
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||| ||||||||||||||||||||||||||||||||||| | |||||| ||||| | ||||||||||||||||||    
T  15660257 aatccatctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 4896716 - 4896648
Alignment:
Q  7 cctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||    
T  4896716 cctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 1112675 - 1112596
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggctttt 84  Q
    ||||||||| || |||||||||||| |||||||||||| | |||||||||||| ||||||||||||||||||||| ||||    
T  1112675 cacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttaggatttt 1112596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 1539711 - 1539649
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaa 67  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1539711 cacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 7352905 - 7352975
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  7352905 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttagg 7352975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 14982334 - 14982280
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14982334 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26250983 - 26250905
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||| |||||  |||||||||||||| |||||    
T  26250983 aatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacactattagg 26250905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 31473919 - 31473849
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  31473919 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 36456015 - 36456088
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||| ||| || ||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  36456015 caccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4441394 - 4441338
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  4441394 ttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 7352882 - 7352814
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||| |||||| ||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||    
T  7352882 caccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 857331 - 857398
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  857331 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 10633102 - 10633035
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacac 72  Q
    ||||||||| || ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  10633102 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 15660275 - 15660342
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  15660275 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 31742845 - 31742778
Alignment:
Q  6 acctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||||||||||||||||||||| | | | |||| |||||||||||||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 31742874 - 31742924
Alignment:
Q  26 cctcaaaacattacattccttcaaaacattcctccatccaaacacactctt 76  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 36455977 - 36455907
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  36455977 caccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 4896721 - 4896794
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||| ||| | ||||||||||||||| ||||    
T  4896721 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 28845941 - 28845876
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacac 70  Q
    ||||| ||| || |||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  28845941 caccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 52493994 - 52493911
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggcttttcaaaat 90  Q
    ||||| |||||| || |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |||||| |||||    
T  52493994 cacctaaaaatattttaattccctcaaa-cattacattacttcaaaacattcc-ccatccaaacacactcttatgctttttaaaat 52493911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42844628 - 42844700
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||| ||||||||||||| |||||||||||||||||||| | |||||| ||| | |||||||||||||||    
T  42844628 aatccacttcaaaataattgatttccctcaaaacattacattacctcaaaatatttccccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 10128066 - 10128133
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| || ||||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||    
T  10128066 ctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 28845963 - 28846030
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| || ||||||||||||||||||||| ||||| |||||||||| | |||||||||||||||||    
T  28845963 ctcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 2125927 - 2125857
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || |||||||||||||||||| |||||||| |||||| ||||| |||||||||||||||||    
T  2125927 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 11041037 - 11040968
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || |||||||| |||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  11041037 cacctcaaagtagttgaattctctcaaaacattacattccctcaaaatattcc-ccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 11348339 - 11348401
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggc 80  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||||| ||||    
T  11348339 ttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactctaaggc 11348401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 16516225 - 16516171
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  16516225 aattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 42844613 - 42844541
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||| |||||| |||||||||| |||||||||||| ||||| | |||||||||||    
T  42844613 cacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 35470192 - 35470122
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || |||||||||||||||||| |||||||| |||||||||| | ||||| |||||||||||    
T  35470192 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 55266864 - 55266934
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || |||||||||||||||| |||| ||| | ||||||||||| ||||||||||||||||||    
T  55266864 caccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactct 55266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 467912 - 467960
Alignment:
Q  26 cctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  467912 cctcaaaacattacattccatcaaaacatt-ctccatccaaacacactct 467960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 1107154 - 1107211
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||||| ||||| |||||| ||||| ||||||||| |||||||    
T  1107154 ttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 42542979 - 42543024
Alignment:
Q  28 tcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 1112711 - 1112781
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || |||||||||||| ||||||||||||   ||||||||| || ||||||||||| |||||    
T  1112711 cacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 5715810 - 5715744
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| || ||||||| |||||||||||||||||   ||||||||||||  ||||||||||||||||    
T  5715810 tcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 1107119 - 1107047
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacatt-ccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||| || ||||||||| ||||||||||||||| |||| |||| ||| |  ||||||||||||||||||||    
T  1107119 ctcaaagtagttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactcttagg 1107047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 19461743 - 19461807
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||| || |||||||| |||||||||||||||| |||||||| ||| | ||||||||| |||||    
T  19461743 tcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 42776707 - 42776635
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||| || |||||||  |||||||||||||||  | | ||||||||| ||||||||||||||||||||    
T  42776707 cacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacacactctta 42776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46724209 - 46724241
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  46724209 aatccacctcaaaataattgaattccctcaaaa 46724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 21012596 - 21012639
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttaggcttt 83  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||    
T  21012596 attccctcaaaacattcgtccatccaaacacactcttaagcttt 21012639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 21012499 - 21012535
Alignment:
Q  6 acctcaaaataattgaattccctcaaaacattacatt 42  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  21012499 acctcaaaatatttgaattccctcataacattacatt 21012535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 41139543 - 41139473
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||| || ||||||| ||||||||||||||||| | ||||| | |||| |||||||||||||||||||    
T  41139543 cacctaaaagtatttgaatttcctcaaaacattacattacctcaaagc-ttcc-ccatccaaacacactctta 41139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 41461604 - 41461674
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  41461604 cacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 14365770 - 14365698
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  14365770 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 11716478 - 11716408
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11716478 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14365801 - 14365858
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14365801 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 17180364 - 17180295
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  17180364 ctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 27033560 - 27033488
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  27033560 cacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 14537269 - 14537198
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctt 76  Q
    ||||||||| || ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  14537269 cacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 10480189 - 10480116
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||||||  ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  10480189 cacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41461589 - 41461512
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||| ||| | ||||||||||||||| ||||    
T  41461589 aatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 11684656 - 11684596
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacattcttag 11684596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 784882 - 784952
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  784882 caccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 33189260 - 33189333
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  33189260 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 33189333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 39630288 - 39630223
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| |||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||||||    
T  39630288 aaatatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 769106 - 769034
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  769106 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 3092339 - 3092279
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  3092339 ttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactcttag 3092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 11141375 - 11141303
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  11141375 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 11141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 11532256 - 11532324
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||||||||||||||||| || ||| ||||| |||||||||||||||    
T  11532256 cacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 11793965 - 11793897
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||||    
T  11793965 cacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 784860 - 784790
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||| || || |||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  784860 ctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactcttag 784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 1583812 - 1583882
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||    
T  1583812 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaa 67  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 17905724 - 17905651
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||||||||| ||||||||| | ||||||||||||||  ||||||||||||  ||||| |||||||||||||    
T  17905724 cacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactcttag 17905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 44256196 - 44256263
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||| ||||||||||||||||||||||| | || ||| ||||| |||||||||||||||    
T  44256196 cacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 28740662 - 28740599
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacac 72  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||| | |||| |||||||||    
T  28740662 tcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 13017849 - 13017779
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||| |||| |||||||||| |||||||||| |  ||||||||||||||||    
T  13017849 cacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 30698351 - 30698289
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaa 67  Q
    ||||||||  || ||||||||| ||||||||||||||||| |||||||||||| |||||||||    
T  30698351 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 35047682 - 35047752
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || ||||||||||| |||||| |||||| | |||||||||||| |||||||||||||||||    
T  35047682 caccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 7228031 - 7228087
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||| ||||||||||||||||  |||||||||| | |||||||||||||||||||    
T  7228031 aattccttcaaaacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 14954323 - 14954264
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||| || |||| |||||||||  |||||||||||||| |||||||||||||||||    
T  14954323 ttgaattctcttaaaagattacattcactcaaaacattcctctatccaaacacactctta 14954264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 10244234 - 10244172
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggc 80  Q
    |||||||||||||||||||||| |||| ||| || ||||  ||||||||||||||||| ||||    
T  10244234 ttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactctaaggc 10244172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 45094490 - 45094544
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||| ||||| ||||||||||||  ||| ||||||||||||    
T  45094490 aattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 11684696 - 11684733
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11684696 attccctcaaaacattcctccatccaaacacactctta 11684733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 8735914 - 8735844
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||  ||||||| ||||| |||||||||    |||||||||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactct 8735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 11595389 - 11595355
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattac 39  Q
    |||||||||||| ||||||||||||||||||||||    
T  11595389 cacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11606783 - 11606710
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||| ||||| | |||| |||||||||||||||||||||||  ||||| |||| | ||||||    
T  11606783 cacctcaaagtatttgtattccttgaaaatattacattccttcaaaacattccctcatcctaacaaattcttag 11606710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 7167670 - 7167714
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaa 49  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||||    
T  7167670 cacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27033575 - 27033607
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaa 33  Q
    |||||||||||||| ||||||||||||||||||    
T  27033575 aatccacctcaaaagaattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 40046871 - 40046800
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40046871 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactcttagg 40046800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 33902724 - 33902667
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33902724 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13404901 - 13404829
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| ||| | |||||||||||||||    
T  13404901 aatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 515549 - 515615
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  515549 tcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 3853686 - 3853616
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  3853686 cacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 3858144 - 3858074
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  3858144 cacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 17110936 - 17110866
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  17110936 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 17110958 - 17111028
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  17110958 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 36103167 - 36103097
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| || ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36103167 tcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37268092 - 37268166
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| | |||||||||||||||    
T  37268092 aatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 44889420 - 44889354
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  44889420 tcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 28324688 - 28324745
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28324688 ttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 33986074 - 33986001
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || |||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  33986074 cacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 42711372 - 42711441
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  42711372 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3853701 - 3853773
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||| ||| | |||||||||||||||    
T  3853701 aatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3858159 - 3858231
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||| ||| | |||||||||||||||    
T  3858159 aatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40046875 - 40046931
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcc 57  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  40046875 aatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacattcc 40046931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 8689189 - 8689138
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaaca 69  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8689189 ttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 33377310 - 33377384
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||| |||| || |||||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||    
T  33377310 caccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttagg 33377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 14308 - 14233
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggct 81  Q
    |||| |||| || ||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  14308 caccccaaagtatttgaattcccttaaaacattacattccctccaaacattcc-ccatccaaacacactcttaggct 14233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 14991750 - 14991690
Alignment:
Q  17 attgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  14991750 attgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 23011804 - 23011732
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||| || ||||||||||||| ||||||||||||| |||||||||||  || ||||||||||||||||    
T  23011804 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 1088295 - 1088362
Alignment:
Q  10 caaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||| ||||||| |||||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  1088295 caaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 35979017 - 35979084
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacac 72  Q
    ||||||||| || ||||||||||||  || |||||||||| |||||||||||||||||||||||||||    
T  35979017 cacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 24045030 - 24044960
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||  || ||||||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  24045030 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 29257364 - 29257434
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||    
T  29257364 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14800062 - 14800119
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||    
T  14800062 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 29482820 - 29482888
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||| |||| || |||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||    
T  29482820 caccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 4156269 - 4156324
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||    
T  4156269 ttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 30435309 - 30435250
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    ||||| || ||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  30435309 aaatagttaaattccctccaaacattacattccctcaaaacatttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 31807471 - 31807409
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||    
T  31807471 aaatagttgaattccctcaaaacattacattcc-tcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 44346691 - 44346757
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||    
T  44346691 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 13404919 - 13404968
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcc 57  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  13404919 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 13404968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 8049323 - 8049272
Alignment:
Q  6 acctcaaaataattgaattccctcaaaacattacattccttcaaaacattcc 57  Q
    |||||||| || ||||||||||||||||||||| ||||| ||||||||||||    
T  8049323 acctcaaagtatttgaattccctcaaaacattatattccctcaaaacattcc 8049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 27322687 - 27322734
Alignment:
Q  30 aaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 32626069 - 32626120
Alignment:
Q  27 ctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||||||||||||||| |||||| ||||| |||||||| |||||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 9982706 - 9982637
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||| || ||||| |||||||||||||||| | | |||||||| |||||||||||||| ||||    
T  9982706 cacctcaaaatatttaaattctctcaaaacattacattaccttaaaacatt-ctccatccaaacacgctct 9982637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 30444963 - 30445001
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  30444963 attccctcaaaacattcctccatccaaacacactcttag 30445001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 33902769 - 33902829
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||||||||||||  ||||||| ||||| |||||| |||||| ||||||||||||||    
T  33902769 ttgaattccctcaaaacaaaacattccctcaaa-cattcccccatcccaacacactcttagg 33902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 42739984 - 42739947
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  42739984 attccctcaaaacattcctccatccaaacacactctta 42739947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42740016 - 42740048
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  42740016 aatccacctcaaaataattgaattccctcaaaa 42740048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 75
Target Start/End: Original strand, 7202934 - 7202969
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||||||||||||||||||||||||||||||    
T  7202934 attccctcaaaacattcctccatccaaacacactct 7202969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 14800014 - 14799975
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactcttagg 14799975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 7202900 - 7202863
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  7202900 attccctcaaaacattcatccatccaaacacactctta 7202863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 11744732 - 11744804
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||| || ||||||||| ||| ||||||||||||| || ||| ||||   ||||||||||||||||||    
T  11744732 caccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactctta 11744804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 83
Target Start/End: Original strand, 16024377 - 16024405
Alignment:
Q  55 tcctccatccaaacacactcttaggcttt 83  Q
    |||||||||||||||||||||||||||||    
T  16024377 tcctccatccaaacacactcttaggcttt 16024405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 40643913 - 40643980
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  40643913 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 40643980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 32470951 - 32470873
Alignment:
Q  6 acctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggctttt 84  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  32470951 accttaaaatagttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacactcttaggctttt 32470873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 2721560 - 2721628
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  2721560 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 19533907 - 19533975
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  19533907 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28828432 - 28828504
Alignment:
Q  1 aatccacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| ||| | |||||||||||||||    
T  28828432 aatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 9764427 - 9764510
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggcttttcaaa 88  Q
    ||||||||| || ||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||| || ||| |||||    
T  9764427 cacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactctaagtcttctcaaa 9764510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 15374062 - 15374121
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  15374062 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 15374030 - 15373960
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  15374030 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 37722894 - 37722964
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  37722894 cacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 25935290 - 25935363
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  25935290 cacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttag 25935363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 40090414 - 40090487
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  40090414 cacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 2316435 - 2316376
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  2316435 ttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 9764408 - 9764329
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggctttt 84  Q
    ||||| ||| || |||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||| |||||    
T  9764408 caccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactcttagtctttt 9764329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 15804389 - 15804322
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||| || |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  15804389 ctcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 23092064 - 23092123
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  23092064 ttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 6634078 - 6634012
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||||||||||||||||||||||||| | |||||| || || ||||||||||||||||||||    
T  6634078 aaataattgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 22303870 - 22303940
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||  || ||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  22303870 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 22767022 - 22766952
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  22767022 caccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 26281269 - 26281339
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||| || ||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  26281269 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 41762215 - 41762289
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||| |||| || ||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  41762215 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagg 41762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 927372 - 927299
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||| |||| || |||||||||||||||||| |||||||| |||||||||| | ||||||||||||||||||||    
T  927372 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 3563347 - 3563278
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  3563347 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 10314715 - 10314646
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||||| ||||||||    
T  10314715 tcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaacatactcttag 10314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 20523222 - 20523291
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    ||||| ||| || ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  20523222 caccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  20 gaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 32250111 - 32250169
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  32250111 ttgaattccctcaaaacattactttccctcaaaacattcc-ccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 32390029 - 32389974
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  32390029 ttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 40809408 - 40809337
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||| || ||||||||||||||||||||| ||||  |||||||||| | |||||||||||||||||||||    
T  40809408 ctcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttagg 40809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 2316468 - 2316537
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || |||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  2316468 cacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatt-ttccatccaaacacactct 2316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 20523203 - 20523133
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||| || |||||||||| |||||||||||  |||||||||||||||||    
T  20523203 cacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 33245385 - 33245447
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggc 80  Q
    |||||||  |||||||||||||||||| |||||||||||| |||||||||||||||| |||||    
T  33245385 ttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcataggc 33245447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 5658821 - 5658772
Alignment:
Q  30 aaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactcttagg 5658772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16515107 - 16515180
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    |||||||||  | ||||||||||||||||||||||||||| | |||||||||   |||||||||||||||||||    
T  16515107 cacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 32390061 - 32390134
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||| ||||    ||||||||||||||||||    
T  32390061 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 34982272 - 34982212
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||||||||||||| ||||||| |||||||||||| | |||||||||||||||||||    
T  34982272 ttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactcttagg 34982212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  21 aattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37145501 - 37145569
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || |||||||| |||| ||||||||||||| |||||||||||| |||||||||| ||||    
T  37145501 cacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 20320661 - 20320716
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||| |||| |||||||||||||||||||||| | ||||||||||||||    
T  20320661 ttgaattcccttaaaatattacattccttcaaaacattcattcatccaaacacact 20320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 9894322 - 9894388
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    ||||||||| || |||||||||||   ||||||||||||| |||||||||||| |||||||||||||    
T  9894322 cacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 13243514 - 13243453
Alignment:
Q  20 gaattccctcaaaacattacattccttcaaaacattcctccatc--caaacacactcttagg 79  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||  ||||||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagg 13243453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 16515074 - 16515009
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    |||||||||  | ||||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  16515074 cacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacatt-ctccatccaaacaca 16515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 35379400 - 35379344
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    |||||||||||||||||||||||||   |||||||||||| |||||||||||||||||    
T  35379400 ttgaattccctcaaaacattacattatctcaaaacattcc-ccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 15270871 - 15270908
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactctta 77  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  15270871 attccctcaaaacattcctccatccaaacacactctta 15270908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 23092019 - 23091963
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| ||||||||||||||||| |||||| ||||| ||||| |||||||||||    
T  23092019 ttgaattccttcaaaacattacattccctcaaaatattcc-ccatcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 14834894 - 14834826
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||| ||||||| ||||||||||||||| || ||||||||  |||| ||||||||||    
T  14834894 cacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacacact 14834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 40809444 - 40809500
Alignment:
Q  19 tgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||| |||||||||||||||||  |||||||||| | ||||| |||||||||||    
T  40809444 tgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactct 40809500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 2550363 - 2550324
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  2550363 attccctcaaaacattcccccatccaaacacactcttagg 2550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 13243514 - 13243561
Alignment:
Q  26 cctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||||||||| | |||||| ||||| |||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 75
Target Start/End: Original strand, 34982313 - 34982348
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34982313 attccctcaaaacattcctccatccaaacacactct 34982348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 37090345 - 37090282
Alignment:
Q  11 aaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    |||||| ||||||| |||||||||||  |||| | ||||||||||| || ||||||||||||||    
T  37090345 aaaatatttgaatttcctcaaaacatcgcattacctcaaaacattcttctatccaaacacactc 37090282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 8255091 - 8255033
Alignment:
Q  11 aaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaaca 69  Q
    |||||| ||||||||||||||||||||||||| | | |||  |||||||||| ||||||    
T  8255091 aaaatatttgaattccctcaaaacattacattaccttaaagtattcctccattcaaaca 8255033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 22305147 - 22305109
Alignment:
Q  40 attccttcaaaacattcctccatccaaacacactcttag 78  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttag 22305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 32470974 - 32471015
Alignment:
Q  8 ctcaaaataattgaattccctcaaaacattacattccttcaa 49  Q
    |||||| || ||||||||||||||||||||||||||| ||||    
T  32470974 ctcaaagtagttgaattccctcaaaacattacattccctcaa 32471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 34105118 - 34105089
Alignment:
Q  46 tcaaaacattcctccatccaaacacactct 75  Q
    ||||||||||||||||||||||||||||||    
T  34105118 tcaaaacattcctccatccaaacacactct 34105089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 42067 - 41997
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  42067 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 42080 - 42139
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactctta 77  Q
    |||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 494 - 562
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  494 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 462 - 397
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggcttt 83  Q
    |||||||||||||||||||||  |||| |||||| ||||| |||||||||||||||||||| ||||    
T  462 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagacttt 397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 2099 - 2031
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  2099 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 2131 - 2196
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttaggcttt 83  Q
    |||||||||||||||||||||  |||| |||||| ||||| |||||||||||||||||||| ||||    
T  2131 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagacttt 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 4145 - 4071
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    ||||||||| || ||||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||    
T  4145 cacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttagg 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 83013 - 82945
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||| ||| || ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  83013 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 7208 - 7153
Alignment:
Q  18 ttgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  7208 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 19267 - 19194
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactcttagg 79  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||| | ||| ||||||||||||||| |||||    
T  19267 cacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacacttttagg 19194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 19788 - 19855
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacact 73  Q
    ||||||||| || |||||||  || ||||||||||||||| |||||||| ||| |||||||||||||||    
T  19788 cacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacacact 19855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 4501 - 4570
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    |||| ||||||| ||||||| ||||||||||||| ||||| ||||||||||||  |||||||||||||||    
T  4501 caccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 5145 - 5214
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    |||| ||||||| ||||||| ||||||||||||| ||||| ||||||||||||  |||||||||||||||    
T  5145 caccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 10952 - 10887
Alignment:
Q  9 tcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactc 74  Q
    ||||| || ||||||||||||||||||||||||||| | ||||||||| ||||| |||||||||||    
T  10952 tcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 2930 - 2867
Alignment:
Q  12 aaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacacactct 75  Q
    ||||| ||||||||||||||||||||||||||  || ||||||||| ||||| |||||||||||    
T  2930 aaatatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 56363 - 56429
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattccttcaaaacattcctccatccaaacaca 71  Q
    ||||| ||| || |||||||||||||||||||||| |||| |||||| |||||  ||||||||||||    
T  56363 caccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 56344 - 56305
Alignment:
Q  5 cacctcaaaataattgaattccctcaaaacattacattcc 44  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  56344 cacctcaaagtagttgaattccctcaaaacattacattcc 56305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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