View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1629_low_15 (Length: 249)

Name: NF1629_low_15
Description: NF1629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1629_low_15
NF1629_low_15
[»] chr6 (20 HSPs)
chr6 (1-110)||(34883527-34883636)
chr6 (131-238)||(31110759-31110864)
chr6 (136-238)||(17598554-17598656)
chr6 (158-238)||(11427640-11427720)
chr6 (135-238)||(31976247-31976350)
chr6 (127-238)||(23128125-23128236)
chr6 (133-238)||(30341358-30341463)
chr6 (126-238)||(15832567-15832679)
chr6 (134-238)||(15990040-15990144)
chr6 (158-238)||(32869700-32869780)
chr6 (136-238)||(4231548-4231650)
chr6 (136-238)||(15508022-15508124)
chr6 (136-238)||(29857827-29857929)
chr6 (133-238)||(6209463-6209568)
chr6 (141-238)||(22880656-22880753)
chr6 (136-204)||(31109432-31109500)
chr6 (132-238)||(12732478-12732584)
chr6 (135-201)||(22422053-22422119)
chr6 (141-238)||(28536486-28536581)
chr6 (136-238)||(31953028-31953130)
[»] chr3 (32 HSPs)
chr3 (130-238)||(11347920-11348028)
chr3 (136-238)||(26141530-26141632)
chr3 (136-238)||(47531865-47531967)
chr3 (134-238)||(27714889-27714993)
chr3 (134-238)||(41189762-41189866)
chr3 (132-238)||(49607410-49607516)
chr3 (135-238)||(17470404-17470507)
chr3 (136-238)||(51419358-51419460)
chr3 (136-238)||(53982011-53982113)
chr3 (158-238)||(26754717-26754797)
chr3 (134-238)||(54868893-54868997)
chr3 (135-238)||(8956761-8956864)
chr3 (159-238)||(31456712-31456791)
chr3 (136-238)||(33644200-33644302)
chr3 (140-238)||(52629304-52629402)
chr3 (134-238)||(11907369-11907473)
chr3 (190-238)||(25407145-25407193)
chr3 (135-238)||(24699952-24700055)
chr3 (135-238)||(35536625-35536728)
chr3 (134-204)||(11095385-11095455)
chr3 (136-238)||(14623837-14623939)
chr3 (136-238)||(20764913-20765015)
chr3 (141-238)||(13898053-13898150)
chr3 (158-238)||(8076415-8076495)
chr3 (166-238)||(9563029-9563101)
chr3 (134-238)||(33118849-33118953)
chr3 (134-210)||(35093583-35093659)
chr3 (158-238)||(36331327-36331407)
chr3 (158-238)||(48587089-48587169)
chr3 (133-204)||(36707456-36707527)
chr3 (148-194)||(32605956-32606002)
chr3 (136-238)||(45058551-45058652)
[»] chr2 (32 HSPs)
chr2 (131-238)||(42257188-42257295)
chr2 (136-238)||(40613900-40614002)
chr2 (134-238)||(9058478-9058582)
chr2 (130-238)||(38273140-38273248)
chr2 (135-238)||(5574486-5574589)
chr2 (135-238)||(33436210-33436313)
chr2 (132-238)||(45097733-45097839)
chr2 (141-238)||(19930818-19930915)
chr2 (134-238)||(10249380-10249484)
chr2 (131-238)||(33436098-33436205)
chr2 (136-238)||(13438343-13438445)
chr2 (136-238)||(17473020-17473122)
chr2 (136-238)||(27864704-27864806)
chr2 (136-238)||(28381653-28381755)
chr2 (141-238)||(28863460-28863557)
chr2 (135-236)||(32505648-32505749)
chr2 (136-236)||(4060685-4060785)
chr2 (135-234)||(2533123-2533221)
chr2 (136-238)||(38732354-38732456)
chr2 (136-238)||(40701478-40701580)
chr2 (141-238)||(41575142-41575240)
chr2 (158-238)||(2997485-2997565)
chr2 (135-238)||(7465733-7465836)
chr2 (131-238)||(20700810-20700917)
chr2 (135-238)||(36168835-36168938)
chr2 (185-238)||(13365402-13365455)
chr2 (134-238)||(30915461-30915565)
chr2 (133-204)||(38882846-38882916)
chr2 (136-234)||(43490121-43490219)
chr2 (136-201)||(17820039-17820104)
chr2 (186-238)||(3034981-3035033)
chr2 (186-238)||(3154193-3154245)
[»] chr5 (24 HSPs)
chr5 (135-238)||(6679697-6679800)
chr5 (136-238)||(28177775-28177877)
chr5 (135-238)||(2740273-2740376)
chr5 (132-238)||(13811648-13811754)
chr5 (136-238)||(26720516-26720618)
chr5 (136-238)||(26990265-26990367)
chr5 (136-238)||(35943890-35943992)
chr5 (136-236)||(14831814-14831914)
chr5 (134-238)||(15409608-15409712)
chr5 (135-238)||(2252166-2252269)
chr5 (132-238)||(18520882-18520988)
chr5 (136-238)||(35785199-35785301)
chr5 (136-238)||(40145407-40145509)
chr5 (133-238)||(3921263-3921368)
chr5 (132-236)||(31008984-31009088)
chr5 (159-234)||(42414304-42414379)
chr5 (136-238)||(33149636-33149738)
chr5 (136-236)||(20073516-20073616)
chr5 (134-238)||(36732940-36733044)
chr5 (159-238)||(39557515-39557594)
chr5 (148-238)||(33825322-33825412)
chr5 (134-238)||(39688895-39688999)
chr5 (135-204)||(41470448-41470517)
chr5 (158-210)||(16327923-16327975)
[»] chr1 (28 HSPs)
chr1 (133-238)||(32813244-32813349)
chr1 (136-238)||(27564733-27564835)
chr1 (135-236)||(51898683-51898784)
chr1 (135-238)||(37926436-37926539)
chr1 (132-238)||(8346386-8346492)
chr1 (134-238)||(49811525-49811629)
chr1 (132-238)||(5958998-5959104)
chr1 (141-238)||(44548374-44548471)
chr1 (131-235)||(37649193-37649297)
chr1 (134-234)||(38632323-38632423)
chr1 (133-236)||(2581912-2582015)
chr1 (132-238)||(38595150-38595256)
chr1 (136-238)||(41608491-41608593)
chr1 (136-234)||(48716284-48716382)
chr1 (130-238)||(26440728-26440836)
chr1 (136-238)||(43132-43234)
chr1 (136-238)||(9474874-9474976)
chr1 (136-238)||(47452318-47452420)
chr1 (136-238)||(50590998-50591100)
chr1 (141-234)||(26274437-26274530)
chr1 (137-234)||(44453980-44454077)
chr1 (158-238)||(3000341-3000421)
chr1 (158-238)||(50630480-50630560)
chr1 (163-238)||(41758832-41758907)
chr1 (158-236)||(11152378-11152456)
chr1 (185-236)||(3302533-3302584)
chr1 (179-236)||(48489343-48489400)
chr1 (133-205)||(23597122-23597194)
[»] chr7 (33 HSPs)
chr7 (136-238)||(19329842-19329944)
chr7 (141-238)||(3784000-3784097)
chr7 (137-238)||(35522877-35522978)
chr7 (132-236)||(7727902-7728006)
chr7 (134-238)||(19436185-19436289)
chr7 (135-238)||(3434561-3434664)
chr7 (158-238)||(3694389-3694469)
chr7 (135-238)||(22343360-22343463)
chr7 (135-238)||(36361911-36362014)
chr7 (132-238)||(35468853-35468959)
chr7 (133-238)||(40957704-40957809)
chr7 (134-238)||(7389387-7389491)
chr7 (134-238)||(38044195-38044299)
chr7 (159-238)||(8238236-8238315)
chr7 (135-238)||(36362025-36362128)
chr7 (127-238)||(41915732-41915843)
chr7 (136-238)||(21234401-21234503)
chr7 (136-238)||(32564424-32564526)
chr7 (136-238)||(35137533-35137635)
chr7 (136-230)||(46374808-46374902)
chr7 (141-238)||(32951491-32951588)
chr7 (134-238)||(8080381-8080485)
chr7 (134-238)||(36208171-36208275)
chr7 (135-238)||(26296643-26296746)
chr7 (127-238)||(38837208-38837319)
chr7 (131-238)||(40846111-40846218)
chr7 (135-238)||(46033799-46033902)
chr7 (136-238)||(4999512-4999614)
chr7 (136-238)||(38267040-38267142)
chr7 (132-205)||(18207176-18207249)
chr7 (166-238)||(16374822-16374894)
chr7 (132-212)||(45223038-45223118)
chr7 (136-238)||(41423682-41423784)
[»] chr8 (27 HSPs)
chr8 (135-236)||(37038478-37038579)
chr8 (135-238)||(32032724-32032826)
chr8 (132-238)||(5957826-5957932)
chr8 (136-238)||(43414579-43414681)
chr8 (158-238)||(40423941-40424021)
chr8 (136-238)||(15048180-15048281)
chr8 (136-238)||(15197333-15197435)
chr8 (138-238)||(10621085-10621185)
chr8 (136-238)||(504119-504221)
chr8 (136-238)||(1179938-1180040)
chr8 (132-238)||(16056399-16056505)
chr8 (132-238)||(16383373-16383479)
chr8 (158-238)||(14547944-14548024)
chr8 (134-238)||(15258927-15259031)
chr8 (134-238)||(24307791-24307895)
chr8 (136-238)||(12831047-12831149)
chr8 (136-238)||(23122595-23122697)
chr8 (136-238)||(34012294-34012396)
chr8 (134-238)||(4854861-4854965)
chr8 (134-238)||(34307214-34307318)
chr8 (134-238)||(42221513-42221617)
chr8 (136-238)||(30479472-30479574)
chr8 (133-238)||(10284629-10284734)
chr8 (158-238)||(8841430-8841510)
chr8 (135-191)||(25838196-25838252)
chr8 (132-199)||(24307625-24307692)
chr8 (185-238)||(9122234-9122287)
[»] scaffold0321 (1 HSPs)
scaffold0321 (127-238)||(10107-10218)
[»] chr4 (25 HSPs)
chr4 (136-238)||(41236347-41236449)
chr4 (132-238)||(50052426-50052532)
chr4 (136-236)||(50526171-50526271)
chr4 (134-238)||(55475189-55475293)
chr4 (127-238)||(19670714-19670825)
chr4 (135-238)||(47986207-47986310)
chr4 (168-238)||(56300163-56300233)
chr4 (134-234)||(29547961-29548061)
chr4 (134-238)||(32766956-32767060)
chr4 (136-238)||(6034044-6034146)
chr4 (132-238)||(42044365-42044471)
chr4 (133-238)||(29239883-29239988)
chr4 (134-238)||(48183047-48183151)
chr4 (136-238)||(40574779-40574881)
chr4 (135-238)||(44536744-44536846)
chr4 (135-238)||(50813890-50813993)
chr4 (132-238)||(480445-480551)
chr4 (136-238)||(11511460-11511562)
chr4 (136-238)||(31910192-31910294)
chr4 (158-238)||(17983741-17983821)
chr4 (159-238)||(29977908-29977987)
chr4 (136-238)||(3481654-3481756)
chr4 (136-238)||(8343161-8343263)
chr4 (185-238)||(41823931-41823984)
chr4 (136-234)||(54473535-54473633)
[»] scaffold1268 (1 HSPs)
scaffold1268 (136-238)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (136-238)||(927-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (136-238)||(4029-4131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (161-238)||(152523-152600)
[»] scaffold0316 (1 HSPs)
scaffold0316 (159-238)||(17077-17156)


Alignment Details
Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34883527 - 34883636
Alignment:
Q  1 ccctcacttttcctaatcattaatagagtaacacaaatagcatccgttttaacgtattctttctaaaatttactttttcattagataaaatatatatggg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  34883527 ccctcacttttcctaatcattaatagagtaacacaaatagcatccattttaacgtattctttctcaaatttactttttcattagataaaacatatatggg 34883626  T
Q  101 tcttaccact 110  Q
    ||||||||||    
T  34883627 tcttaccact 34883636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 31110864 - 31110759
Alignment:
Q  131 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 230  Q
    |||||||||||||||| ||||||||  ||||||||||||||| | ||||||| |||||  |||||||||||||| | || ||||| ||||||||||||||    
T  31110864 taaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T
Q  231 ctttctct 238  Q
    ||||||||    
T  31110766 ctttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 17598554 - 17598656
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  236 tct 238  Q
    |||    
T  17598654 tct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 11427640 - 11427720
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  11427640 ttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||||||||  ||||||||||||| | | ||| |||  ||||||||||||||||||||| ||| ||| | || |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  235 ctct 238  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 23128236 - 23128125
Alignment:
Q  127 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 226  Q
    ||||||||||| | |||||| |||||||  |||| |||  |||||||| |||||||  ||||||||||||||||||||  |||  |||||||  ||||||    
T  23128236 tttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaag 23128137  T
Q  227 cacactttctct 238  Q
    ||||||||||||    
T  23128136 cacactttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 30341463 - 30341358
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  233 ttctct 238  Q
    ||||||    
T  30341363 ttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 238
Target Start/End: Original strand, 15832567 - 15832679
Alignment:
Q  126 atttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaa 225  Q
    ||||| |||||||| |||||| |||||||  |||||||| ||||| ||| |||||||  ||||||||||| ||||||||  |||  ||||||||||||||    
T  15832567 attttcaaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T
Q  226 gcacactttctct 238  Q
      ||| |||||||    
T  15832667 atacattttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  234 tctct 238  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 32869700 - 32869780
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  32869700 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 4231548 - 4231650
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||  ||| ||||  ||||||||||||||| |  ||| ||  |||||||||||||||||||||  |||||||| || ||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  236 tct 238  Q
    |||    
T  4231648 tct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  236 tct 238  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  236 tct 238  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    ||||||| |||||| |||||||   |||||||||||||||   ||||||| ||||||||||||||| |||||  |||  |||| || |||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  233 ttctct 238  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 22880753 - 22880656
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||| ||||||||||  |||  |||| || |||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 204  Q
    |||| ||||| ||||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 12732478 - 12732584
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| ||||||||| ||| ||||||||| |    ||||||  |||||||||||||||||||||   || |||||||  || |||||||     
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  232 tttctct 238  Q
    |||||||    
T  12732578 tttctct 12732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 201  Q
    ||||| |||||| ||||||||  ||||||||||||| |||| |||||| ||| |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 28536581 - 28536486
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||||  | |||| |||| ||  ||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  236 tct 238  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 11348028 - 11347920
Alignment:
Q  130 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 229  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||||| |||||||||||||||||||||  || ||||| |||||| ||||||    
T  11348028 ttaaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcac 11347929  T
Q  230 actttctct 238  Q
    |||||||||    
T  11347928 actttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| ||  |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  236 tct 238  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  |||| |||||||||| ||||| |||| ||||||| |||||||||||||  |||||| | || ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  236 tct 238  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||  ||||||||| |||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  234 tctct 238  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||  |||| |||||| |||||||||  || ||||| || ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  234 tctct 238  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 49607410 - 49607516
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||||||  |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  232 tttctct 238  Q
    |||||||    
T  49607510 tttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| |||||||  |||||||||||||||| ||||| |||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  235 ctct 238  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  |||| || ||||||||| ||| |||  |||||||||||||||||||||  || || || || ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  236 tct 238  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  236 tct 238  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 26754717 - 26754797
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| | || ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  26754717 ttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  234 tctct 238  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| ||||||||  ||| ||||||||||||| |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  235 ctct 238  Q
    ||||    
T  8956861 ctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 31456712 - 31456791
Alignment:
Q  159 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||| ||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  31456712 taggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   || |||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  236 tct 238  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 52629304 - 52629402
Alignment:
Q  140 tatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| |||||||   ||||||| |||||||    |  ||| |||||||||||||||||| ||| ||||||||| || ||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  234 tctct 238  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 25407193 - 25407145
Alignment:
Q  190 aaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  25407193 aaaaatctgacacgtgatcatatggatcccacacaaacacactttctct 25407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||| ||||||  ||  |||| |||| |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  235 ctct 238  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| ||||||||  ||| ||||||||||| | |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  235 ctct 238  Q
    ||||    
T  35536725 ctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 11095455 - 11095385
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 204  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  236 tct 238  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||| | ||||||||  |||||||| ||||||   ||| |||  |||||||||||||||||||||  || ||||| || | ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  236 tct 238  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 13898150 - 13898053
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  |||| |||||||||||||||| |||| |||| |   ||||||||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 8076415 - 8076495
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8076415 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 9563029 - 9563101
Alignment:
Q  166 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||| | |||||||| || | |||||||||||||||  |||  |||||||||||||| ||||||||||||    
T  9563029 caatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||| ||||||||  |||  |||||||  || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  234 tctct 238  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 35093583 - 35093659
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 210  Q
    |||||||| |||| |||||||  |||||||| ||||||| | |||||||| ||| ||||||||||||| ||| ||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcat 35093659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||||| || |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 48587169 - 48587089
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  ||||||| ||||||| |||||||||||    
T  48587169 ttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 36707527 - 36707456
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 204  Q
    ||||||| |||||| ||||| |   ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 32606002 - 32605956
Alignment:
Q  148 atagacatttttaggtggcaatacatcttttgacattcacacaaaaa 194  Q
    ||||||| | ||||||||||||||||  |||||||||||||||||||    
T  32606002 atagacaatcttaggtggcaatacattctttgacattcacacaaaaa 32605956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 45058652 - 45058551
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| |||   ||||||||||||||| | || ||||  |||| |||||||||||| |||| |||||||| || ||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  236 tct 238  Q
    |||    
T  45058553 tct 45058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 42257188 - 42257295
Alignment:
Q  131 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 230  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||  || ||||| || |||||||||||    
T  42257188 taaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T
Q  231 ctttctct 238  Q
    ||||||||    
T  42257288 ctttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  |||||||||||||||||||||  || ||||| || ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  236 tct 238  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  234 tctct 238  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 38273248 - 38273140
Alignment:
Q  130 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 229  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| | ||| |||  ||||||||||||||||||||   || ||||| || |||| |||||    
T  38273248 ttaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcac 38273149  T
Q  230 actttctct 238  Q
    |||||||||    
T  38273148 actttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  235 ctct 238  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||||||||||| ||| ||||   ||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  235 ctct 238  Q
    ||||    
T  33436310 ctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 45097839 - 45097733
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||  ||||||  || |||||||||||||| |||  |||||||| || ||||||| ||||    
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  232 tttctct 238  Q
    |||||||    
T  45097739 tttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 19930915 - 19930818
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||| ||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  234 tctct 238  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 33436205 - 33436098
Alignment:
Q  131 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 230  Q
    ||||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||    
T  33436205 taaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T
Q  231 ctttctct 238  Q
    ||||||||    
T  33436105 ctttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||| ||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  236 tct 238  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| ||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  236 tct 238  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||| ||||||||||| | |||||||| |||||||||||||||||||| ||||  |||| || ||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  236 tct 238  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| |||| ||||  ||||||||||||||||||||  ||| |||||  | ||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  236 tct 238  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 28863460 - 28863557
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  235 ct 236  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||| ||||||| |||||||||| ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  236 t 236  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 2533123 - 2533221
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||  ||||||||||||||||||||   || || || || |||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| |||   ||| ||| |||||||||  ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  236 tct 238  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  236 tct 238  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 41575142 - 41575240
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatgga-tcctgcacaagcacactttctct 238  Q
    |||||| ||||||||  |||| ||| |||||| | |||||||||||||||||||| ||||| ||| |||| ||||  ||| ||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 2997565 - 2997485
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  235 ctct 238  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 20700810 - 20700917
Alignment:
Q  131 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 230  Q
    ||||||||| |||||| ||||||||  ||| ||||||||||| | ||||||    |||||||||||||||||||  |||  |||| || ||| |||||||    
T  20700810 taaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T
Q  231 ctttctct 238  Q
    ||||||||    
T  20700910 ctttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||||||||  |||| || ||||||||| ||| ||   ||||||||||| |||||||||  || ||||| || ||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  235 ctct 238  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 13365402 - 13365455
Alignment:
Q  185 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||||| |||| |||||||| || ||||||| |||||||||||    
T  13365402 cacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   ||||||||||||||| | ||||||   |||| |||||||||||||||  |||  |||| || | ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  234 tctct 238  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 38882916 - 38882846
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 204  Q
    ||||||| |||||| |||||||   ||||||||||||| | | |||||||| ||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 43490121 - 43490219
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||||||||| ||| |||   ||||||| ||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 17820104 - 17820039
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 201  Q
    ||||||||||| |||||||  | |||||||||||||| |  ||||||  |||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 3035033 - 3034981
Alignment:
Q  186 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||||||||| ||| ||||||||| || ||||||| | |||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctct 3034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 3154193 - 3154245
Alignment:
Q  186 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||||||||||||| ||| |||||||| || ||| |||| |||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctct 3154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  235 ctct 238  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  236 tct 238  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  235 ctct 238  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 13811648 - 13811754
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| | |||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  232 tttctct 238  Q
    |||||||    
T  13811748 tttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  236 tct 238  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  236 tct 238  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  | |  |||||||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  236 tct 238  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| ||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  236 t 236  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 15409712 - 15409608
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||||||||  ||||||| ||||||||  |||||||  ||||||||||||||||||||   || ||||| || |||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  234 tctct 238  Q
    |||||    
T  15409612 tctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  235 ctct 238  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 18520988 - 18520882
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||| | |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 18520889  T
Q  232 tttctct 238  Q
    |||||||    
T  18520888 tttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  ||||||| |||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  236 tct 238  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| | ||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  236 tct 238  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 3921368 - 3921263
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  233 ttctct 238  Q
    ||||||    
T  3921268 ttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 31008984 - 31009088
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||  ||  |||  ||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  232 tttct 236  Q
    |||||    
T  31009084 tttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 42414379 - 42414304
Alignment:
Q  159 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  236 tct 238  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||||  |||| || ||||||| | ||||||| ||||| ||||||||  ||||||| ||  |||| |||||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  236 t 236  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   |||||| |||||||| | |||||||  |||||||||||||||||| |  |||  |||| || ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  234 tctct 238  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 39557594 - 39557515
Alignment:
Q  159 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||| |||||| || || |||| ||||||||||||||||||||||||| ||||| ||   |||| ||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctct 39557515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 33825412 - 33825322
Alignment:
Q  148 atagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||| |||||||||||||||    ||||||  |||| |||||||||||||||| |||| || | | | ||||||||||||||||||    
T  33825412 atagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| |||   ||| |||||||||||||  ||||||  ||||||||||||||| | ||| ||||||| | || ||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  234 tctct 238  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 41470517 - 41470448
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 204  Q
    ||||| || ||| |||||||  |||||||||||||||||| ||| | ||||| | |||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgt 41470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 16327923 - 16327975
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 210  Q
    |||||||||||||||||  ||||||  |||| |||||||||||||||| ||||    
T  16327923 ttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcat 16327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    |||||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| || |||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  233 ttctct 238  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  236 tct 238  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  235 ct 236  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||||| || |||||||||||||||||||||| |||  |||| ||||||||||||||||  || |||||||| | ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  235 ctct 238  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 8346492 - 8346386
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| |||| ||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| |||||||||||||||    
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  232 tttctct 238  Q
    |||||||    
T  8346392 tttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||||||||  ||||||| ||||||| | |||||||| ||||||||||||||||||||   ||||| ||  | ||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  234 tctct 238  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 5959104 - 5958998
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    ||||||||||||||| ||| |||   ||| ||||||||||| || ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||    
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  232 tttctct 238  Q
    |||||||    
T  5959004 tttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 44548471 - 44548374
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| |||||||| |||||||||||||||| | ||||| |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 37649193 - 37649297
Alignment:
Q  131 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 230  Q
    |||| |||| |||||| |||||||| ||||||||||||||||   |||||||  ||||||||||||||||||||| |||  || || | |||||||||||    
T  37649193 taaatgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T
Q  231 ctttc 235  Q
    |||||    
T  37649293 ctttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 38632423 - 38632323
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   ||||||||||||||| ||||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  234 t 234  Q
    |    
T  38632323 t 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  233 ttct 236  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 38595150 - 38595256
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| ||| |||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  232 tttctct 238  Q
    |||||||    
T  38595250 tttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || | ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  236 tct 238  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 26440728 - 26440836
Alignment:
Q  130 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 229  Q
    ||||| |||||| |||| ||||||||  |||| || ||||||| | ||| |||  |||||||||||||||||||||  || |||||||| ||| ||||||    
T  26440728 ttaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T
Q  230 actttctct 238  Q
    |||||||||    
T  26440828 actttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||| | ||||| | ||||||||| |||||||  ||||||||||||||||||||  |||  ||||  | ||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  236 tct 238  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  236 tct 238  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||| ||||||  |||  ||||||| ||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  236 tct 238  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  236 tct 238  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 26274437 - 26274530
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||| |||||||   ||| ||||||||||||| |||||||| |||| ||||||||||||| |  |||  ||||||||||||||| |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacacttt 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 44453980 - 44454077
Alignment:
Q  137 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||| |||||||  |||| |||||||||||||| |||| |  ||||||||||||||||| ||| | |  |||||||  ||||||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 3000341 - 3000421
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  3000341 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 50630480 - 50630560
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||||| ||||  |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  50630480 ttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 41758832 - 41758907
Alignment:
Q  163 tggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||| | |||||||  ||||||||||||||||||||  ||| ||||| || |||||| ||||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 11152456 - 11152378
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 236  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||  |||| | || || |||||||||| ||||||    
T  11152456 ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 3302584 - 3302533
Alignment:
Q  185 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 236  Q
    |||||||||||||||||||| |||||||||| ||   |||||||||||||||    
T  3302584 cacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  179 gacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 236  Q
    ||||| ||||||||||||||||| ||| |||  ||||||| ||||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 23597194 - 23597122
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 205  Q
    ||||||| |||||| ||||||||  |||||||||||||||   ||||| |  |||| ||||||||||||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  236 tct 238  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 3784000 - 3784097
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 35522877 - 35522978
Alignment:
Q  137 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 236  Q
    |||||||||| ||||||||  ||| ||||||||||| | ||| |||  |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  237 ct 238  Q
    ||    
T  35522977 ct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 7727902 - 7728006
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    ||||||||||||||| ||| |||   |||||||| |||||| || |||||||||||| |||||||||||| ||| ||||||||| || ||||||| ||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacac 7728001  T
Q  232 tttct 236  Q
    |||||    
T  7728002 tttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| ||||||||  ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  ||||||| ||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  234 tctct 238  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  |||||||||| |||||||||  |||  ||||||| |||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  235 ctct 238  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 3694389 - 3694469
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||| ||||||| ||||| |||  ||||||||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  3694389 ttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||| |||||||| || ||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  235 ctct 238  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  235 ctct 238  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 35468959 - 35468853
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| ||||||||  |||| |||||||||||| |||||||  |||| |||||||| | | |||| ||| |||| ||||||||| |||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacac 35468860  T
Q  232 tttctct 238  Q
    |||||||    
T  35468859 tttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    ||||||| |||||| ||||||| | |||||||||||||||   ||||| |  ||||||||||||||||||||  |||  ||||||| | |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  233 ttctct 238  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   |||||||||||||||   |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  234 tctct 238  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||| ||||||||||||||||| ||   |||||||| || ||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  234 tctct 238  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 8238236 - 8238315
Alignment:
Q  159 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||||||| | |||||||  ||||||||||||||||| ||  ||||||||| || ||||||| |||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| |||||||   |||||||| |||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  235 ctct 238  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 41915732 - 41915843
Alignment:
Q  127 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 226  Q
    ||||||| |||||||||||| ||| |||   ||||||||||||||| |  ||||||   |||||||||||||||| |||  |||||||| || |||||||    
T  41915732 tttttaatagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T
Q  227 cacactttctct 238  Q
     |||||||||||    
T  41915832 tacactttctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||| ||||||| | ||||||| |||||||||||| ||||||||   || ||| | || ||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  236 tct 238  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||  ||||||||||||||||| |||   ||||||| || ||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  236 tct 238  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 35137533 - 35137635
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| ||||||||||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  236 tct 238  Q
    |||    
T  35137633 tct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 230
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 230  Q
    ||||||||||| ||||||||  ||||||||||| ||| | ||| |||  |||||||||||||||||||||  || ||||| || |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 32951588 - 32951491
Alignment:
Q  141 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||| ||||||| | |||| || ||||||||| ||| |||| ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  |||| || ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  234 tctct 238  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| |||||||   |||||||| |||||||   ||||||  |||||||||| |||||| ||| |||  |||| |||||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  234 tctct 238  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||||||||  ||||||| ||||| | | ||| |||| |||| |||||||||| |||||  |||||||| || |||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  235 ctct 238  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 38837208 - 38837319
Alignment:
Q  127 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 226  Q
    |||| |||||||| |||||| |||||||   ||||||||||||||| | ||  |||   |||||||||||||||||||  |||  |||| || |||||||    
T  38837208 ttttcaaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaag 38837307  T
Q  227 cacactttctct 238  Q
    ||||||||||||    
T  38837308 cacactttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 40846218 - 40846111
Alignment:
Q  131 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 230  Q
    |||| ||||||||||| ||| ||||  ||||||||||||||| |  ||||||| ||||||||||||| ||| ||  | ||||||| || ||||||  |||    
T  40846218 taaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaataca 40846119  T
Q  231 ctttctct 238  Q
    ||||||||    
T  40846118 ctttctct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||||| ||| ||||||||||||||| | ||| |||  |||| |||||||||||||||| ||| ||| |  | ||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  235 ctct 238  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   |||| |||||||||| |||||||||  ||||||||||||||| ||||  |||  |||| || |||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  236 tct 238  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||| ||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  236 tct 238  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 18207176 - 18207249
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 205  Q
    ||||||||||||||| |||||||   ||||||||||||||| || ||||||  || |||||||||| |||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtg 18207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 16374894 - 16374822
Alignment:
Q  166 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||  ||||||| ||||||||||||||||||||| |||  ||||||   ||||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 45223038 - 45223118
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatat 212  Q
    |||||||| |||||| ||| ||||  ||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||||    
T  45223038 aaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatat 45223118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 41423682 - 41423784
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  |||| ||| |||||| || |||||| | |||||||||||||||| ||| |||  | ||||| | ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  236 tct 238  Q
    |||    
T  41423782 tct 41423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  235 ct 236  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||| |||   ||||||||||||||||| || ||||| ||||||||||||||||| |||  ||||||||||||||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  235 ctct 238  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 5957826 - 5957932
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||| ||| |||||| ||||||||| ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||| |||||    
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacac 5957925  T
Q  232 tttctct 238  Q
    |||||||    
T  5957926 tttctct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 43414681 - 43414579
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  |||| |||||| ||| | |||||||  ||||||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  236 tct 238  Q
    |||    
T  43414581 tct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 40424021 - 40423941
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  40424021 ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||   || ||||| || ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  236 tct 238  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  236 tct 238  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 10621185 - 10621085
Alignment:
Q  138 gttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctc 237  Q
    ||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||||   || || ||||| ||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  238 t 238  Q
    |    
T  10621085 t 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 504221 - 504119
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  236 tct 238  Q
    |||    
T  504121 tct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  236 tct 238  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 16056505 - 16056399
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    ||||||||||||||| ||| ||||  ||| ||| |||||||||  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16056406  T
Q  232 tttctct 238  Q
    |||||||    
T  16056405 tttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 16383373 - 16383479
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    ||||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  232 tttctct 238  Q
    |||||||    
T  16383473 tttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 14547944 - 14548024
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  14547944 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||||| | | |||| ||||||||||||  | ||||| |||| |||||||||||| ||| |||  |||| |||||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  234 tctct 238  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| |||   |||||||||||||||||  ||||||  ||||||||||||||| | |||  |||||||| || ||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  234 tctct 238  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  236 tct 238  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||| ||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  236 tct 238  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  236 tct 238  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| ||||||||  ||||||||||||||| | ||| |||   ||| |||||||||| | |||  || ||||| |||||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  234 tctct 238  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||| | || ||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  234 tctct 238  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| ||| ||||  ||||||| ||||||||   | ||||  |||||||||||||||||||| |||||||||| ||   ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  234 tctct 238  Q
    |||||    
T  42221613 tctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 30479574 - 30479472
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| |||   ||||||||||||||| | |||||||| |||| |||||||||||| |||   ||||||| |  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  236 tct 238  Q
    |||    
T  30479474 tct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    |||||||||||||| |||||||   ||| ||| |||||||   |||||||  ||||||||||| ||||||||  |||  |||| || |||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  233 ttctct 238  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 8841510 - 8841430
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 25838196 - 25838252
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaa 191  Q
    |||||||||||||||||| ||  |||||||||||||||  ||||||||| |||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 24307625 - 24307692
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctga 199  Q
    ||||||||||||||| ||| |||   |||||||||||||||||  ||||||  |||||||||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 9122234 - 9122287
Alignment:
Q  185 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||||| ||  |||  ||||||| |||||||||||||||||||    
T  9122234 cacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 10218 - 10107
Alignment:
Q  127 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 226  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||  |||  |||| |  | |||||    
T  10218 ttttaaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaag 10119  T
Q  227 cacactttctct 238  Q
    ||||||||||||    
T  10118 cacactttctct 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  236 tct 238  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 50052532 - 50052426
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  232 tttctct 238  Q
    |||||||    
T  50052432 tttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||| |||  ||||| | |||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  236 t 236  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| ||||  ||||||||||||||| | |||||||  ||||||||||||||||| |||  |||||||| |||||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  234 tctct 238  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 19670825 - 19670714
Alignment:
Q  127 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 226  Q
    |||| ||||||||||||||| ||| |||   ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || |||||||    
T  19670825 ttttgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T
Q  227 cacactttctct 238  Q
     |||||||||||    
T  19670725 tacactttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||| |||   |||||||||||||||||  ||||||| ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  235 ctct 238  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 56300233 - 56300163
Alignment:
Q  168 atacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctct 56300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 29548061 - 29547961
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| ||||  |||||||||||||||||  ||||||  ||||||||||||||||| |||  ||||||||||| ||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  234 t 234  Q
    |    
T  29547961 t 29547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  ||||||  || |||||||||||||| |||  |||||||| |||||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  234 tctct 238  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||| ||  |||  ||||||| ||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  236 tct 238  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 42044471 - 42044365
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| |||||||   ||||||||||||||||| ||  |||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  232 tttctct 238  Q
    |||||||    
T  42044371 tttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  133 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 232  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||| ||||||  |||  |||| ||  ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  233 ttctct 238  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  134 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 233  Q
    |||||| |||||| |||||||   ||| ||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  234 tctct 238  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 40574779 - 40574881
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacg-tgatcatatggatcctgcacaagcacacttt 234  Q
    ||||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||| || | | |||||||| | |||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgct-acatggatcccgaacaagcacacttt 40574877  T
Q  235 ctct 238  Q
    ||||    
T  40574878 ctct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||| ||| ||||||||||||||||| | || ||||| ||||||||||||||||| ||| |||||| || ||  || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  235 ctct 238  Q
    ||||    
T  44536747 ctct 44536744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  135 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||||||||||| ||| ||| | |||||||| |||||| |  ||||||  ||||||||||||||||| ||| ||||||| | || ||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  235 ctct 238  Q
    ||||    
T  50813893 ctct 50813890  T

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Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 480551 - 480445
Alignment:
Q  132 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 231  Q
    |||||||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  232 tttctct 238  Q
    |||||||    
T  480451 tttctct 480445  T

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Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  |||| || ||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  236 tct 238  Q
    |||    
T  11511462 tct 11511460  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||||||||  ||||||| |||||||   |||||||  |||||||||||||||||| |   || ||||| || ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  236 tct 238  Q
    |||    
T  31910292 tct 31910294  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 17983821 - 17983741
Alignment:
Q  158 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

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Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 29977908 - 29977987
Alignment:
Q  159 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||||||| |  || |||  ||||||||||||||||||||  ||||||||| ||  ||||||||||||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctct 29977987  T

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Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||  ||||||||||||||||   |||||||  |||||||||||||||||| |  |||  |||| ||  |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  236 tct 238  Q
    |||    
T  3481754 tct 3481756  T

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Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 8343263 - 8343161
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    ||||||||||| ||| ||||  ||||||||||||||||| |||||||   ||| |||||||||||| |||  |||||||| || ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  236 tct 238  Q
    |||    
T  8343163 tct 8343161  T

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Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 41823931 - 41823984
Alignment:
Q  185 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||||||||||||||||||  ||| ||||| || |||||||||||||||||||    
T  41823931 cacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 234  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

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Target: scaffold1268 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  236 tct 238  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  236 tct 238  Q
    |||    
T  929 tct 927  T

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Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  136 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 235  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  236 tct 238  Q
    |||    
T  4129 tct 4131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 152523 - 152600
Alignment:
Q  161 ggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    |||||||||||| |  ||||||  ||||||||||||||||| ||| |||||||||||| ||||||  |||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 17077 - 17156
Alignment:
Q  159 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 238  Q
    ||||| ||||||||||  | ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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