View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1629_low_24 (Length: 213)
Name: NF1629_low_24
Description: NF1629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1629_low_24 |
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Alignment Details
Target: chr5 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 33498910 - 33499051
Alignment:
| Q |
15 |
aattaattcattgattacatctttaaattggctaaatataggaaatgcaaattttattttccgtgagcttcaataatttttatacatctttttccgaaat |
114 |
Q |
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| T |
33498910 |
aattgattcattgattacatctttaaattggctaaatataggaaatgcaaattttattttccgtgagcttcaataa-ttttatacatctatttccgaaat |
33499008 |
T |
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| Q |
115 |
gataaataagcatactctataggaaaagattacttgtatagta |
157 |
Q |
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| T |
33499009 |
gataaataatcatactctataggaaaagattacttgtctagta |
33499051 |
T |
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