View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16303_high_2 (Length: 269)
Name: NF16303_high_2
Description: NF16303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16303_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 36651818 - 36652056
Alignment:
| Q |
13 |
aatatctgtcaatgtctgctataaaagaaacaacaatacatgtttccatgacatatcatttgtaccaaatcataaacatgcctgaaagagtagttatttt |
112 |
Q |
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| T |
36651818 |
aatatctgtcaatgtctgctataaaagaaacaacaatacatgtttccatgacatatcatttgtactaaatcataaacatgcctgaaagagtagttatttt |
36651917 |
T |
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| Q |
113 |
agttgatatgnnnnnnnccaaccaaaccaaagttgttaataacgcccgacatatttgtcattcaaaaaccacacgtttcctttttatttaataactattg |
212 |
Q |
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| T |
36651918 |
agttgatataaaaaaaaccaaccaaaccaaagttgttaataacgcccgacatatttgtcattcaaaaaccacacatttcctttttatttaataactattg |
36652017 |
T |
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| Q |
213 |
agaatcaaaaggaactcacccattcagttagtcattctc |
251 |
Q |
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| T |
36652018 |
aggatcaaaaggaactcactcattcagttagtcattctc |
36652056 |
T |
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