View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16306_high_5 (Length: 345)

Name: NF16306_high_5
Description: NF16306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16306_high_5
NF16306_high_5
[»] chr7 (49 HSPs)
chr7 (6-293)||(16219408-16219703)
chr7 (1-293)||(47831942-47832242)
chr7 (1-293)||(16056462-16056762)
chr7 (1-302)||(67869-68180)
chr7 (4-293)||(810819-811117)
chr7 (1-259)||(16324174-16324440)
chr7 (1-291)||(22073052-22073350)
chr7 (6-302)||(9389387-9389692)
chr7 (1-302)||(44014300-44014608)
chr7 (1-302)||(18005771-18006075)
chr7 (1-107)||(12255478-12255584)
chr7 (122-291)||(15754704-15754874)
chr7 (6-106)||(2279810-2279910)
chr7 (136-293)||(12901459-12901620)
chr7 (127-231)||(15113140-15113243)
chr7 (126-231)||(15116677-15116781)
chr7 (1-107)||(12756404-12756509)
chr7 (126-291)||(11995850-11996014)
chr7 (126-291)||(28505121-28505285)
chr7 (122-291)||(34200920-34201088)
chr7 (7-107)||(21064855-21064955)
chr7 (1-107)||(15143724-15143830)
chr7 (1-107)||(44116833-44116938)
chr7 (1-49)||(38227866-38227914)
chr7 (1-71)||(1867673-1867743)
chr7 (1-99)||(3564051-3564149)
chr7 (1-71)||(12901769-12901839)
chr7 (1-71)||(14045188-14045258)
chr7 (1-71)||(14355218-14355288)
chr7 (1-50)||(16385945-16385994)
chr7 (1-46)||(28504988-28505033)
chr7 (1-49)||(9509575-9509623)
chr7 (126-162)||(9751370-9751406)
chr7 (1-49)||(15754574-15754622)
chr7 (126-162)||(39267466-39267502)
chr7 (1-48)||(17061647-17061694)
chr7 (261-291)||(16495536-16495566)
chr7 (1-50)||(40443762-40443811)
chr7 (304-337)||(48273392-48273425)
chr7 (304-340)||(67745-67781)
chr7 (126-162)||(2529873-2529909)
chr7 (1-49)||(12699218-12699266)
chr7 (7-71)||(14036638-14036702)
chr7 (261-293)||(14044883-14044915)
chr7 (7-71)||(14346668-14346732)
chr7 (261-293)||(14354913-14354945)
chr7 (304-340)||(18430709-18430745)
chr7 (1-49)||(39267333-39267381)
chr7 (304-340)||(47831807-47831843)
[»] scaffold0243 (2 HSPs)
scaffold0243 (1-293)||(5809-6109)
scaffold0243 (304-340)||(6208-6244)
[»] chr5 (35 HSPs)
chr5 (1-293)||(21329182-21329483)
chr5 (1-293)||(26011721-26012021)
chr5 (11-251)||(21741240-21741489)
chr5 (126-293)||(21501974-21502142)
chr5 (1-293)||(21565677-21565978)
chr5 (1-291)||(22959220-22959519)
chr5 (1-107)||(22144378-22144484)
chr5 (11-162)||(5888872-5889032)
chr5 (1-231)||(19669094-19669334)
chr5 (126-293)||(20026760-20026926)
chr5 (135-291)||(19660666-19660822)
chr5 (1-70)||(21498704-21498773)
chr5 (152-293)||(22178064-22178205)
chr5 (1-49)||(21985834-21985882)
chr5 (126-162)||(22120013-22120049)
chr5 (1-48)||(36154515-36154562)
chr5 (1-107)||(1096795-1096901)
chr5 (1-110)||(23390183-23390293)
chr5 (1-49)||(9078338-9078386)
chr5 (1-49)||(24493954-24494002)
chr5 (1-49)||(24529607-24529655)
chr5 (126-162)||(24767157-24767193)
chr5 (1-48)||(11580932-11580979)
chr5 (261-291)||(36314685-36314715)
chr5 (1-50)||(8286540-8286589)
chr5 (1-70)||(20026550-20026619)
chr5 (1-50)||(21292668-21292717)
chr5 (261-302)||(21741487-21741528)
chr5 (1-49)||(13025696-13025744)
chr5 (1-49)||(13095880-13095928)
chr5 (1-49)||(19660524-19660572)
chr5 (304-340)||(21329582-21329618)
chr5 (79-107)||(21501919-21501947)
chr5 (304-340)||(21502241-21502277)
chr5 (1-49)||(22119880-22119928)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-293)||(13074-13374)
scaffold0138 (136-293)||(18066-18223)
[»] scaffold0530 (2 HSPs)
scaffold0530 (1-293)||(715-1020)
scaffold0530 (304-340)||(1119-1155)
[»] chr3 (49 HSPs)
chr3 (1-293)||(14234622-14234924)
chr3 (1-293)||(15471059-15471358)
chr3 (11-302)||(1465106-1465406)
chr3 (1-293)||(16097463-16097764)
chr3 (4-223)||(32307872-32308099)
chr3 (1-231)||(12933997-12934236)
chr3 (1-231)||(49667770-49668009)
chr3 (1-107)||(324563-324669)
chr3 (1-293)||(49389331-49389616)
chr3 (128-293)||(16103914-16104079)
chr3 (128-231)||(1644505-1644608)
chr3 (1-107)||(2050888-2050992)
chr3 (1-106)||(52523414-52523519)
chr3 (1-231)||(9513104-9513344)
chr3 (1-231)||(9521079-9521319)
chr3 (126-218)||(13210148-13210240)
chr3 (136-293)||(37250996-37251153)
chr3 (1-107)||(53070386-53070491)
chr3 (136-293)||(22110180-22110337)
chr3 (126-193)||(12171925-12171992)
chr3 (136-239)||(43927322-43927425)
chr3 (1-107)||(17247973-17248079)
chr3 (1-107)||(1644370-1644475)
chr3 (1-47)||(16104168-16104214)
chr3 (1-107)||(40213408-40213514)
chr3 (6-107)||(42386739-42386840)
chr3 (122-162)||(12340017-12340057)
chr3 (1-49)||(14572974-14573022)
chr3 (126-162)||(14665870-14665906)
chr3 (126-162)||(14735383-14735419)
chr3 (1-71)||(37250799-37250869)
chr3 (6-71)||(605983-606048)
chr3 (1-50)||(20698134-20698183)
chr3 (126-162)||(4588608-4588644)
chr3 (1-49)||(11424450-11424498)
chr3 (1-49)||(14179708-14179756)
chr3 (126-162)||(14669025-14669061)
chr3 (1-49)||(17488243-17488291)
chr3 (1-49)||(17499725-17499773)
chr3 (1-49)||(18438920-18438968)
chr3 (1-49)||(26687273-26687321)
chr3 (261-291)||(12174216-12174246)
chr3 (261-291)||(13210284-13210314)
chr3 (1-70)||(23275106-23275175)
chr3 (1-49)||(12340138-12340186)
chr3 (7-71)||(12378360-12378424)
chr3 (1-49)||(13442660-13442708)
chr3 (1-69)||(21837866-21837934)
chr3 (1-49)||(25476072-25476120)
[»] chr8 (42 HSPs)
chr8 (1-302)||(6520493-6520802)
chr8 (1-302)||(38854938-38855247)
chr8 (44-292)||(21285733-21285989)
chr8 (1-286)||(21673845-21674139)
chr8 (1-302)||(23760527-23760840)
chr8 (1-223)||(26355385-26355616)
chr8 (8-107)||(39834160-39834259)
chr8 (1-105)||(19801114-19801218)
chr8 (126-291)||(5866097-5866261)
chr8 (135-291)||(17141050-17141206)
chr8 (153-293)||(983248-983391)
chr8 (126-291)||(21491129-21491293)
chr8 (136-293)||(17266821-17266978)
chr8 (152-293)||(20498698-20498839)
chr8 (136-293)||(22364797-22364954)
chr8 (1-107)||(41598512-41598618)
chr8 (126-291)||(21249519-21249682)
chr8 (136-293)||(37116484-37116641)
chr8 (136-293)||(24353156-24353316)
chr8 (1-46)||(5865964-5866009)
chr8 (1-46)||(17141302-17141347)
chr8 (126-291)||(21255357-21255520)
chr8 (1-50)||(45130718-45130767)
chr8 (1-49)||(6759643-6759691)
chr8 (1-49)||(18878924-18878972)
chr8 (1-49)||(21255605-21255653)
chr8 (1-45)||(21491382-21491426)
chr8 (1-71)||(20499024-20499094)
chr8 (1-107)||(22875393-22875499)
chr8 (1-71)||(24353464-24353534)
chr8 (1-46)||(16092028-16092073)
chr8 (5-50)||(25362842-25362887)
chr8 (1-50)||(31971629-31971678)
chr8 (304-340)||(6520368-6520404)
chr8 (1-49)||(7373135-7373183)
chr8 (7-71)||(17439122-17439186)
chr8 (1-49)||(18818097-18818145)
chr8 (1-49)||(20536594-20536642)
chr8 (1-49)||(21249767-21249815)
chr8 (1-45)||(22627125-22627169)
chr8 (1-49)||(23406767-23406815)
chr8 (304-340)||(38855336-38855372)
[»] chr1 (48 HSPs)
chr1 (1-293)||(22921554-22921856)
chr1 (6-293)||(20636983-20637279)
chr1 (11-302)||(35981383-35981683)
chr1 (1-293)||(33681142-33681443)
chr1 (1-293)||(52927668-52927968)
chr1 (116-286)||(49261481-49261651)
chr1 (1-222)||(20248481-20248711)
chr1 (1-215)||(22237841-22238063)
chr1 (11-107)||(28194145-28194241)
chr1 (126-293)||(21861389-21861555)
chr1 (126-231)||(12271744-12271848)
chr1 (126-293)||(21896078-21896241)
chr1 (136-293)||(16368115-16368272)
chr1 (1-231)||(21754232-21754469)
chr1 (136-293)||(50686748-50686905)
chr1 (126-231)||(20918798-20918902)
chr1 (1-68)||(43697727-43697794)
chr1 (1-107)||(433335-433441)
chr1 (1-49)||(50209900-50209948)
chr1 (1-71)||(26065358-26065428)
chr1 (1-107)||(34510108-34510214)
chr1 (1-71)||(50687032-50687102)
chr1 (1-46)||(20918990-20919035)
chr1 (1-50)||(22355872-22355921)
chr1 (1-50)||(22357558-22357607)
chr1 (6-70)||(21861186-21861250)
chr1 (1-49)||(22532655-22532703)
chr1 (6-57)||(21895924-21895975)
chr1 (1-68)||(50613727-50613794)
chr1 (1-68)||(50621555-50621622)
chr1 (261-291)||(14295508-14295538)
chr1 (1-71)||(16367897-16367967)
chr1 (261-291)||(20918738-20918768)
chr1 (1-71)||(35260742-35260812)
chr1 (1-71)||(41049655-41049725)
chr1 (261-291)||(51130698-51130728)
chr1 (1-70)||(16093503-16093572)
chr1 (1-50)||(20846917-20846966)
chr1 (1-50)||(21027054-21027103)
chr1 (264-293)||(22237762-22237791)
chr1 (1-50)||(27250427-27250476)
chr1 (1-50)||(38801089-38801138)
chr1 (136-293)||(41049864-41050021)
chr1 (136-293)||(50613945-50614101)
chr1 (136-293)||(50621773-50621929)
chr1 (304-340)||(13212991-13213027)
chr1 (1-49)||(20135573-20135621)
chr1 (122-162)||(28194265-28194305)
[»] chr6 (35 HSPs)
chr6 (8-293)||(23019541-23019834)
chr6 (1-231)||(19652390-19652629)
chr6 (1-286)||(22080424-22080719)
chr6 (122-291)||(1561437-1561607)
chr6 (1-258)||(27332971-27333236)
chr6 (1-258)||(27393711-27393976)
chr6 (136-293)||(19668507-19668664)
chr6 (12-106)||(25644651-25644745)
chr6 (126-291)||(28496294-28496458)
chr6 (126-291)||(29808705-29808869)
chr6 (152-239)||(9098370-9098457)
chr6 (1-107)||(25956308-25956414)
chr6 (3-107)||(4185512-4185616)
chr6 (3-107)||(4667902-4668006)
chr6 (1-107)||(18457043-18457148)
chr6 (136-234)||(35008344-35008442)
chr6 (3-107)||(4189284-4189388)
chr6 (3-107)||(4674749-4674853)
chr6 (152-215)||(20109354-20109417)
chr6 (1-107)||(29808570-29808677)
chr6 (1-46)||(19303228-19303273)
chr6 (1-50)||(20360658-20360707)
chr6 (1-50)||(20637981-20638030)
chr6 (1-49)||(1561689-1561737)
chr6 (1-49)||(18409514-18409562)
chr6 (1-49)||(22779914-22779962)
chr6 (1-49)||(28496160-28496208)
chr6 (136-234)||(23076926-23077024)
chr6 (1-70)||(19023814-19023883)
chr6 (4-49)||(25629045-25629090)
chr6 (261-293)||(9098467-9098499)
chr6 (304-340)||(17287881-17287917)
chr6 (304-340)||(25714417-25714453)
chr6 (304-340)||(27333303-27333339)
chr6 (304-340)||(27394043-27394079)
[»] chr4 (45 HSPs)
chr4 (1-302)||(39705975-39706284)
chr4 (11-302)||(15099474-15099774)
chr4 (1-302)||(15190441-15190751)
chr4 (1-293)||(8846507-8846809)
chr4 (136-293)||(12288038-12288195)
chr4 (128-231)||(12774194-12774297)
chr4 (1-107)||(15464616-15464722)
chr4 (1-107)||(43198275-43198381)
chr4 (1-107)||(52242880-52242986)
chr4 (1-107)||(13844867-13844973)
chr4 (136-293)||(53081979-53082137)
chr4 (126-291)||(16596782-16596946)
chr4 (136-293)||(46640285-46640441)
chr4 (1-107)||(12774327-12774432)
chr4 (126-168)||(22634033-22634075)
chr4 (152-293)||(13695-13836)
chr4 (1-49)||(16597031-16597079)
chr4 (126-162)||(24029006-24029042)
chr4 (126-161)||(3332151-3332186)
chr4 (135-202)||(15552039-15552106)
chr4 (4-107)||(44928613-44928716)
chr4 (1-71)||(12287820-12287890)
chr4 (128-162)||(20157112-20157146)
chr4 (1-71)||(53081784-53081854)
chr4 (1-50)||(3097017-3097066)
chr4 (1-50)||(7089251-7089300)
chr4 (1-50)||(12903131-12903180)
chr4 (1-70)||(15868322-15868391)
chr4 (1-49)||(15091283-15091331)
chr4 (1-49)||(22636820-22636868)
chr4 (1-107)||(21814990-21815095)
chr4 (1-107)||(21815319-21815424)
chr4 (1-107)||(21818412-21818517)
chr4 (261-291)||(15551951-15551981)
chr4 (1-107)||(16377209-16377315)
chr4 (126-160)||(32851642-32851676)
chr4 (1-50)||(14053000-14053049)
chr4 (1-49)||(16239679-16239728)
chr4 (126-162)||(13812629-13812665)
chr4 (1-45)||(14039039-14039083)
chr4 (1-49)||(15552199-15552247)
chr4 (304-340)||(16270320-16270356)
chr4 (1-49)||(20156977-20157025)
chr4 (1-49)||(22633900-22633948)
chr4 (304-340)||(39706373-39706409)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-293)||(10662-10962)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-302)||(2331-2641)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-293)||(8150-8450)
scaffold0556 (1-291)||(6946-7245)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-293)||(32670-32970)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-302)||(6660-6971)
scaffold0621 (126-231)||(8666-8770)
[»] scaffold0333 (4 HSPs)
scaffold0333 (1-293)||(6746-7047)
scaffold0333 (1-293)||(14126-14427)
scaffold0333 (304-340)||(6611-6647)
scaffold0333 (304-340)||(13991-14027)
[»] scaffold0476 (1 HSPs)
scaffold0476 (126-293)||(12901-13068)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-302)||(19389-19700)
[»] scaffold0023 (4 HSPs)
scaffold0023 (5-302)||(39863-40170)
scaffold0023 (126-293)||(100508-100676)
scaffold0023 (1-107)||(101723-101828)
scaffold0023 (131-202)||(101619-101690)
[»] chr2 (25 HSPs)
chr2 (1-285)||(28406119-28406413)
chr2 (1-302)||(25175975-25176276)
chr2 (131-293)||(7556-7718)
chr2 (153-293)||(18786748-18786888)
chr2 (128-231)||(22134038-22134141)
chr2 (136-293)||(23791410-23791567)
chr2 (9-107)||(23708314-23708411)
chr2 (136-293)||(23207413-23207570)
chr2 (126-231)||(22459381-22459485)
chr2 (136-293)||(25109024-25109181)
chr2 (1-45)||(22133904-22133948)
chr2 (1-49)||(23660408-23660456)
chr2 (1-50)||(20309479-20309528)
chr2 (1-46)||(23071650-23071695)
chr2 (1-50)||(23654097-23654146)
chr2 (1-49)||(22337501-22337549)
chr2 (1-49)||(22730920-22730968)
chr2 (1-49)||(27753961-27754009)
chr2 (8-71)||(22412753-22412816)
chr2 (261-291)||(23071906-23071936)
chr2 (1-107)||(23076769-23076874)
chr2 (1-71)||(23207718-23207788)
chr2 (1-50)||(23286235-23286284)
chr2 (1-49)||(298502-298550)
chr2 (304-340)||(22731319-22731355)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-239)||(15517-15764)
scaffold0020 (304-340)||(15862-15898)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-293)||(130040-130341)
scaffold0010 (1-71)||(60325-60395)
[»] scaffold1257 (1 HSPs)
scaffold1257 (126-302)||(2037-2214)
[»] scaffold0218 (3 HSPs)
scaffold0218 (116-293)||(7886-8059)
scaffold0218 (126-231)||(29100-29204)
scaffold0218 (1-45)||(28967-29011)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-231)||(132848-133087)
scaffold0028 (126-302)||(62320-62496)
[»] scaffold0008 (1 HSPs)
scaffold0008 (116-302)||(14506-14693)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-162)||(3196-3366)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-231)||(28496-28735)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-293)||(45476-45778)
[»] scaffold0021 (5 HSPs)
scaffold0021 (136-293)||(136196-136354)
scaffold0021 (136-293)||(144904-145062)
scaffold0021 (1-83)||(62913-62995)
scaffold0021 (1-71)||(135978-136048)
scaffold0021 (1-71)||(144686-144756)
[»] scaffold0278 (2 HSPs)
scaffold0278 (126-302)||(5768-5944)
scaffold0278 (3-64)||(5964-6025)
[»] scaffold0040 (2 HSPs)
scaffold0040 (136-293)||(103467-103624)
scaffold0040 (1-71)||(103270-103340)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-231)||(160880-161119)
[»] scaffold1984 (2 HSPs)
scaffold1984 (1-223)||(334-564)
scaffold1984 (265-293)||(264-292)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-234)||(2490-2731)
[»] scaffold0555 (1 HSPs)
scaffold0555 (57-293)||(10283-10527)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-293)||(7744-8044)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-231)||(32288-32517)
[»] scaffold1765 (1 HSPs)
scaffold1765 (126-293)||(1217-1383)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-107)||(43471-43577)
scaffold0116 (1-107)||(47391-47497)
[»] scaffold1351 (1 HSPs)
scaffold1351 (136-293)||(141-298)
[»] scaffold0413 (1 HSPs)
scaffold0413 (136-287)||(12709-12860)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-76)||(227851-227926)
[»] scaffold1137 (2 HSPs)
scaffold1137 (126-211)||(2122-2207)
scaffold1137 (1-43)||(1988-2030)
[»] scaffold0420 (1 HSPs)
scaffold0420 (136-293)||(6111-6268)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-102)||(12329-12429)
[»] scaffold0261 (3 HSPs)
scaffold0261 (126-291)||(15795-15959)
scaffold0261 (1-46)||(16047-16092)
scaffold0261 (126-159)||(18163-18196)
[»] scaffold0037 (3 HSPs)
scaffold0037 (142-293)||(22509-22656)
scaffold0037 (126-162)||(80152-80188)
scaffold0037 (1-49)||(80019-80067)
[»] scaffold0022 (4 HSPs)
scaffold0022 (136-293)||(78457-78614)
scaffold0022 (1-71)||(80702-80772)
scaffold0022 (1-71)||(128581-128651)
scaffold0022 (174-293)||(128837-128955)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-107)||(32646-32752)
scaffold0120 (1-107)||(46253-46359)
scaffold0120 (1-49)||(16473-16521)
[»] scaffold0475 (1 HSPs)
scaffold0475 (3-107)||(9404-9508)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-107)||(12257-12362)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-107)||(20113-20218)
[»] scaffold0175 (2 HSPs)
scaffold0175 (122-231)||(34317-34425)
scaffold0175 (1-46)||(34509-34554)
[»] scaffold0080 (1 HSPs)
scaffold0080 (136-291)||(19713-19868)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-107)||(1764-1870)
[»] scaffold0357 (2 HSPs)
scaffold0357 (1-71)||(13571-13641)
scaffold0357 (7-71)||(3134-3198)
[»] scaffold0161 (2 HSPs)
scaffold0161 (126-231)||(2265-2369)
scaffold0161 (1-46)||(2132-2177)
[»] scaffold0075 (3 HSPs)
scaffold0075 (152-293)||(53393-53534)
scaffold0075 (126-162)||(8114-8150)
scaffold0075 (1-49)||(7981-8029)
[»] scaffold0046 (2 HSPs)
scaffold0046 (126-223)||(11494-11591)
scaffold0046 (261-291)||(2131-2161)
[»] scaffold0347 (2 HSPs)
scaffold0347 (126-162)||(293-329)
scaffold0347 (1-49)||(414-462)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-49)||(39145-39193)
scaffold0145 (304-340)||(32942-32978)
[»] scaffold0139 (2 HSPs)
scaffold0139 (139-239)||(38507-38607)
scaffold0139 (1-57)||(38751-38807)
[»] scaffold0076 (1 HSPs)
scaffold0076 (6-62)||(24212-24268)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-49)||(16902-16950)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-49)||(40242-40290)
scaffold0026 (1-49)||(39618-39666)
scaffold0026 (1-46)||(59190-59235)
scaffold0026 (1-49)||(26611-26659)
[»] scaffold1403 (1 HSPs)
scaffold1403 (136-239)||(739-841)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-107)||(232-338)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-107)||(4835-4942)
scaffold0228 (1-107)||(12417-12524)
scaffold0228 (1-107)||(22369-22476)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-47)||(5808-5854)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-47)||(649-695)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-47)||(28924-28970)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-71)||(25546-25616)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-107)||(25752-25858)
scaffold0122 (1-49)||(33181-33229)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-51)||(15163-15213)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-110)||(2175-2285)
scaffold0016 (126-162)||(207339-207375)
[»] scaffold0737 (1 HSPs)
scaffold0737 (136-289)||(1626-1779)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-50)||(4829-4878)
[»] scaffold0601 (1 HSPs)
scaffold0601 (1-70)||(7095-7164)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-50)||(750-799)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-50)||(10124-10173)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-50)||(5222-5271)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-50)||(3855-3904)
scaffold0292 (1-45)||(732-776)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-50)||(11211-11260)
[»] scaffold0192 (1 HSPs)
scaffold0192 (126-159)||(10178-10211)
[»] scaffold0006 (2 HSPs)
scaffold0006 (137-234)||(97201-97297)
scaffold0006 (137-234)||(106479-106575)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-49)||(2772-2820)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-49)||(20789-20837)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-49)||(18645-18693)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-49)||(16286-16334)
[»] scaffold0166 (1 HSPs)
scaffold0166 (126-162)||(9654-9690)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-49)||(8219-8267)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-49)||(20498-20546)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-49)||(52298-52346)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-69)||(268094-268162)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-48)||(17695-17742)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-48)||(17167-17214)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-43)||(6515-6557)
[»] scaffold0184 (1 HSPs)
scaffold0184 (261-291)||(1026-1056)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-71)||(27329-27399)
[»] scaffold0098 (1 HSPs)
scaffold0098 (126-160)||(26855-26889)
[»] scaffold1439 (1 HSPs)
scaffold1439 (304-337)||(106-139)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-42)||(700-741)
[»] scaffold0484 (1 HSPs)
scaffold0484 (5-50)||(1288-1333)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-50)||(13869-13918)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-50)||(310-359)
scaffold0358 (1-50)||(5086-5135)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-50)||(13585-13634)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-50)||(47360-47409)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-49)||(12496-12544)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-49)||(23989-24037)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 6 - 293
Target Start/End: Original strand, 16219408 - 16219703
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagagg 105  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||||||| |||||||||||    
T  16219408 taataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatgaatttttgggagttacacgtgaactcgccatggcgagtagagg 16219507  T
Q  106 ctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaac 196  Q
    |  ||          ||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  16219508 ccctcgcctcgcgagttgtctagttacagaatgccttgtt-aggttaaatgcgatctttgtcgcacaagttgatgttagttgatcttggaggttagaaac 16219606  T
Q  197 taagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||||| |||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  16219607 taagttgtttatcttgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgttatataattgtatatacattacatgaat 16219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 47832242 - 47831942
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||  | ||||  || |||||||||||| ||||||    
T  47832242 atgtctaataatgattaggaaagattggagattaagattgaatctggaatagtttaagaacgaattttgag-agttacacatgaactcgccatggcgagt 47832144  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           || ||||| ||| ||||| |||||||||||||||| ||||||||||| || | ||||||  ||||||||||||||||||    
T  47832143 agaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaatgtgatctttgtcggacgagttgatgtgagttgatcttggaggtta 47832044  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||| || |||||||||||||||||||||||||| ||||    
T  47832043 gaaactaagttatttatcttgttgttgttgtttcagtaagcctgaattgtataatctaatgttgtcgctaatgttatataattgtatatacattatatga 47831944  T
Q  292 at 293  Q
    ||    
T  47831943 at 47831942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 16056762 - 16056462
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| |||||||| | ||  ||||||||||||||||||||||    
T  16056762 atgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattacacctgaactcgccatagcgagt 16056663  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          ||  ||||| ||| ||||||||||| |||||||||||||||||||| |||| | ||||||  |||||||||| ||||| |    
T  16056662 agaggctctcgcctcgcgagttacccagttacagaatgccttgtt-aggttaaatgcgatctttgtagcacgagttgatgtgagttgatcttagaggtaa 16056564  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||| |||| ||||||| |||||||| |||  ||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  16056563 gaaactaagttgtttatcttgatgttgttgtttcggtaagcctgaatgatataatctaatgttgttgttaatgttatataattgtatatacattacatga 16056464  T
Q  292 at 293  Q
    ||    
T  16056463 at 16056462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 68180 - 67869
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || || ||| ||||  |  |||||||||||| ||||||    
T  68180 atgtctaataatgattaggaaagattggagattgagattgaacctggaataatttaagaacaaacttgtgggagttacagatgaactcgccatggcgagt 68081  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           |  ||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||  |||||||||| |||||||    
T  68080 agaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaatgcgatccttgtcgcacaagttgatgtgagttgatcttagaggtta 67981  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||  ||| ||||||| ||||||  |||||||||||||||||||||||||| |||    
T  67980 gaaactaagttgtttatcttgctgttgttgtttcagtgagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatatacattatatg 67881  T
Q  291 aatcatgatgat 302  Q
    ||| ||| ||||    
T  67880 aattatgttgat 67869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 4 - 293
Target Start/End: Original strand, 810819 - 811117
Alignment:
Q  4 tctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtaga 103  Q
    |||||||||||||||||||||||||||| | |||||||||||||||    || ||||||||||||||  |  || ||||||||||||||| |||||||||    
T  810819 tctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatgaatttttgtgaactgtacctgaactcgccatggcgagtaga 810918  T
Q  104 ggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaa 194  Q
    |||| ||          |  |   || ||| ||||||||||||| ||||||||||||||||||||| ||| ||||||  |||||| |||||| |||||||    
T  810919 ggctctcgcctcgcgagtacttatgttacaaaatgccttgtttaagttaaatgcgatctttgtcgcgcaagttgatgtgagttgaccttggaagttagaa 811018  T
Q  195 actaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  811019 actaagttatttatcttgctgttgtagtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacattacatgaat 811117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 16324440 - 16324174
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  ||||  |   ||||||||||| ||||||    
T  16324440 atgtctaataatgattaggaaagattggagtttgagattgaacctggaatagtttaagaacgaatttttgagagttagattggaactcgccatggcgagt 16324341  T
Q  101 agaggctatc---tt------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||   ||      || ||||| ||| ||||||||||| |||||||||| |||| ||||||||  | ||||||  |||||||||| |||||||    
T  16324340 agaggccctcgccttgcgaactgcccagttacagaatgccttgtt-aggttaaatgtgatccttgtcgcatgagttgatgtgagttgatcttagaggtta 16324242  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgc 259  Q
    ||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  16324241 gaaactaagttgttgatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgc 16324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 22073350 - 22073052
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||||||||||||| |||||||  ||| ||||||||||||| |||||||||||||||| |||||||| ||||  ||||||||||||||| ||||||    
T  22073350 atgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagt 22073251  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||  ||||| ||| ||||| ||||| ||||||||||||||| ||||||||| | ||||||  ||||||||||  |||| |    
T  22073250 agaggccctcgcctcgcgagttacccagttacagaatgctttgtt-aggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttacaggtaa 22073152  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    | ||||||||| ||| ||||| |||| |||||||||||||||| |||| ||||||||||| ||||||  ||||||||||||||| |||||||||||||||    
T  22073151 ggaactaagttgtttgtcttgatgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgttatataattgcatatacattacatga 22073052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 6 - 302
Target Start/End: Original strand, 9389387 - 9389692
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagagg 105  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||  ||||  | ||||||||||||| |||||||||||    
T  9389387 taatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaacgaatttatgtgagttacagctgaactcgccatggcgagtagagg 9389486  T
Q  106 ctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaac 196  Q
    || ||           |   |||| ||| |||||||||||||||||||| |||||||||||| ||| | ||||||  |||||||||||||||||||||||    
T  9389487 ctctcgcctcgcgagctaagcagttacagaatgccttgtttaggttaaaagcgatctttgtcacacgagttgatgtgagttgatcttggaggttagaaac 9389586  T
Q  197 taagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcat 296  Q
    ||||||||  | |||| |||| |  || ||||||||||  |||||||| |||||||||| ||  |||||||||||||||||||||||||  |||||| ||    
T  9389587 taagttatcgaccttgatgttgtcattccagtaagcctggattgtatattctaatattgatgataatgttatataattgtatatacattgtatgaattat 9389686  T
Q  297 gatgat 302  Q
    | ||||    
T  9389687 gttgat 9389692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 44014608 - 44014300
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||| |||||||||||||| |||||| ||||||||||||||| | ||||    
T  44014608 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgttagttgcacctgaactcgccatggtgagt 44014509  T
Q  101 agaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           |  || || ||| ||||||||||||||||||||||||||| ||||||||| | ||||||  ||||||||   |||||||    
T  44014508 agaggctctcgcctcgcgagctaaccggttacagaatgccttgtttaggttaaatgcgatcattgtcgcacgaattgatgtgagttgatc--agaggtta 44014411  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
     ||||||||||  ||||||||||||| |||||||||||||||| ||||  ||| ||||||| |||||   |||| ||||||| ||||||||||||| |||    
T  44014410 aaaactaagtt-gttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgtttttaatggtatataactgtatatacattatatg 44014312  T
Q  291 aatcatgatgat 302  Q
    ||| ||| ||||    
T  44014311 aattatgttgat 44014300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 18006075 - 18005771
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||| ||||||||      |||||||||||||  ||||||||||||| ||| || ||| ||||  ||||||||||||||| |||| |    
T  18006075 atgtctaataatgattatgaaagatt------tgagattgaacctaaaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgact 18005982  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||| | ||| ||| ||||||||||||||| ||| ||||||||||||||||||| |||||   |||||||||| |||||||    
T  18005981 agaggccctcgcctcgcgaattgactagttacaaaatgccttgtttaggataa-tgcgatctttgtcgcacaagttgatatgagttgatcttagaggtta 18005883  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
    ||||||||||| |||||||||||||| |||||||||||||||| | ||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||    
T  18005882 gaaactaagttgtttatcttgctgttgttgtttcagtaagcctgatttaatatgatctaatgttgttgttaatggtatataattgtatatacattatatg 18005783  T
Q  291 aatcatgatgat 302  Q
    ||| ||| ||||    
T  18005782 aattatgttgat 18005771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12255478 - 12255584
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  12255478 atgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaatttttgggagttacacctgaactcgccatagcgagt 12255577  T
Q  101 agaggct 107  Q
    |||||||    
T  12255578 agaggct 12255584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 291
Target Start/End: Original strand, 15754704 - 15754874
Alignment:
Q  122 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 221  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||||||||| |     
T  15754704 acataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaata 15754803  T
Q  222 tttcagtaagcctaaattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    || ||||||| || |    ||| ||| |||| ||| |   |||||||||||||||||||||||||||||||    
T  15754804 ttccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatga 15754874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 2279810 - 2279910
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagagg 105  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||  |||  |||||||||||||||||||||||||||    
T  2279810 taataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatggatttttgggtgttacacctgaactcgccatagcgagtagagg 2279909  T
Q  106 c 106  Q
    |    
T  2279910 c 2279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 12901620 - 12901459
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggt---ta-gaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||| ||  ||||||| || | ||||||  ||||||||||||||||   || ||||||||||| ||||||||| |||| |||||||||||||    
T  12901620 ttaggttaaatgtgacatttgtcgtacgagttgatgtgagttgatcttggaggtacgtaggaaactaagttgtttatcttgttgttgttgtttcagtaag 12901521  T
Q  232 cctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    | | |||| ||| || |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  12901520 cttgaattatatgatttaatgttgttgttaatgttatatagttgtatatacattacatgaat 12901459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 15113243 - 15113140
Alignment:
Q  127 atgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttca 226  Q
    |||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||    
T  15113243 atgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttca 15113145  T
Q  227 gtaag 231  Q
    |||||    
T  15113144 gtaag 15113140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 15116781 - 15116677
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| | |||||||||||||    
T  15116781 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctactgttattgtttc 15116683  T
Q  226 agtaag 231  Q
    ||||||    
T  15116682 agtaag 15116677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12756404 - 12756509
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||||||||||||| || ||| |||||||||||||||| || |||||||||||| ||||||| || || |||||||||| |||| |||||    
T  12756404 atgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-tttaagaatgaactttttggaagctg-acctgaactcaccatggcgag 12756501  T
Q  100 tagaggct 107  Q
    ||||||||    
T  12756502 tagaggct 12756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 291
Target Start/End: Original strand, 11995850 - 11996014
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||||||||||||||||||||  | | ||||||  |||| ||||| ||||||||||||||| || |||| |||||||||| |||  |    
T  11995850 aatgcctt-tttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatcttagaggttagaaactaatttgtttaccttgctgttaatgtccc 11995948  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  11995949 agtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 11996014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 291
Target Start/End: Original strand, 28505121 - 28505285
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||| ||| | |||| |    
T  28505121 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgttgtcaatgttcc 28505219  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  28505220 agtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 28505285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 291
Target Start/End: Complemental strand, 34201088 - 34200920
Alignment:
Q  122 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 221  Q
    |||||||||||| ||||||||||||||||||  ||||   | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| ||    
T  34201088 acataatgcctt-tttaggttaaatgcgatccctgtcattcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatg 34200990  T
Q  222 tttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |  ||||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  34200989 tcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 34200920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 21064855 - 21064955
Alignment:
Q  7 aataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggc 106  Q
    |||||||||||||||| |||  ||| ||||||||||| ||||||||| | |||||| |||||||   |||  |||| |||||||||| ||||||||||||    
T  21064855 aataatgattaggaaatattttagaatgagattgaacttggaatagtgtcagaatggatttttgagtgttttaccttaactcgccatggcgagtagaggc 21064954  T
Q  107 t 107  Q
    |    
T  21064955 t 21064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15143724 - 15143830
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||||   ||| |||||||| |||||  | |   ||||| ||||||||| |||||     
T  15143724 atgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaacttttgtgattctgacctgtactcgccatggcgagc 15143823  T
Q  101 agaggct 107  Q
    |||||||    
T  15143824 agaggct 15143830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44116938 - 44116833
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| || ||| |||||||||||| |||| || || ||||||||  ||||| | |   ||||||||||||||| |||||     
T  44116938 atgtctaataatgattaggaaagaatgtagaatgagattgaacccggaa-agatttagaatgaaactttgggaatctgacctgaactcgccatggcgagc 44116840  T
Q  101 agaggct 107  Q
    |||||||    
T  44116839 agaggct 44116833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38227914 - 38227866
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  38227914 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 38227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1867673 - 1867743
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  1867673 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 1867743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3564051 - 3564149
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||   ||  |||||||| |||||| | |   |||||||||||||| ||||||    
T  3564051 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggaaatctgacctgaactcgccacagcgag 3564149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12901839 - 12901769
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  12901839 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12901769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14045258 - 14045188
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  14045258 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 14045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14355288 - 14355218
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  14355288 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 14355218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16385945 - 16385994
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  16385945 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 16385994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28504988 - 28505033
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  28504988 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 28505033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9509623 - 9509575
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  9509623 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 9509575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 9751370 - 9751406
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9751370 aatgccttgtttagtttaaatgcgatctttgtcgcac 9751406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15754574 - 15754622
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    ||||||||||||||||||||||||  | ||| |||||||||||||||||    
T  15754574 atgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 15754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 39267466 - 39267502
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||| ||||||||||||||    
T  39267466 aatgccttgtttaggttaaatgtgatctttgtcgcac 39267502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17061647 - 17061694
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga 48  Q
    |||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  17061647 atgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 17061694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 16495566 - 16495536
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  16495566 aatgttatataattgtatatacattacatga 16495536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40443811 - 40443762
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| |  ||  ||||||||||||||||||    
T  40443811 atgtctaataatgattaggaaagaatttaggatgagattgaacctggaat 40443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 48273425 - 48273392
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatga 337  Q
    ||||||||||||||||| ||||||||||||||||    
T  48273425 tgcataagtcggtctaagttgattaagatgatga 48273392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 67781 - 67745
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  67781 tgcatgagtcggtctaagttgattaagatgatgatgt 67745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 2529873 - 2529909
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||||||||  |||||||||||||||||||||||||||    
T  2529873 aatgccttaattaggttaaatgcgatctttgtcgcac 2529909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12699266 - 12699218
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  ||| |||||||||||||    
T  12699266 atgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 12699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 14036702 - 14036638
Alignment:
Q  7 aataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    ||||||||||||| ||| ||  ||||||||||||||||| | | ||||||| |||| ||||||||    
T  14036702 aataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 14036638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 14044915 - 14044883
Alignment:
Q  261 aatgttatataattgtatatacattacatgaat 293  Q
    ||||||||||| |||||||||||||||||||||    
T  14044915 aatgttatatagttgtatatacattacatgaat 14044883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 14346732 - 14346668
Alignment:
Q  7 aataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    ||||||||||||| ||| ||  ||||||||||||||||| | | ||||||| |||| ||||||||    
T  14346732 aataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 14346668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 14354945 - 14354913
Alignment:
Q  261 aatgttatataattgtatatacattacatgaat 293  Q
    ||||||||||| |||||||||||||||||||||    
T  14354945 aatgttatatagttgtatatacattacatgaat 14354913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 18430745 - 18430709
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  18430745 tgcatgagtcggtctaagttgattaagatgatgatgt 18430709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39267333 - 39267381
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  39267333 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 39267381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 47831843 - 47831807
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  47831843 tgcatgagtcggtctaagttgattaagatgatgatgt 47831807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 162; Significance: 2e-86; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5809 - 6109
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||||||||||||||||| |||| |||||||||||||||| | ||||||||||| ||| |||||  | | ||| ||||||||||||| ||||||||    
T  5809 atgtataataatgattaggaaaaattgtagattgagattgaaccagtaatagtttaaggatggattttgtg-atttgcacctgaactcgccttagcgagt 5907  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  5908 agaggccctcgcctcgcgaattacccagttacataatgccttgtttaggttaaatgcgatctttgtcgcgcaagttgatgttagttgatcttggaggtta 6007  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  6008 aaaactaagttatttatcttgctgttattgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacattacatga 6107  T
Q  292 at 293  Q
    ||    
T  6108 at 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 6208 - 6244
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6208 tgcatgagtcggtctaagttgattaagatgatgatgt 6244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 21329182 - 21329483
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||| | |||||||| |||||||  ||||||||||||||||||||||| |||| |||||||||||||| ||||| || |||||||||||||||||||    
T  21329182 atgtctagttatgattagaaaagattctagattgagattgaacctggaataatttaggaatgaatttttgggagttgcacttgaactcgccatagcgagt 21329281  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          ||  | ||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||| |    
T  21329282 agaggctctcgcctcgcgaattacctagttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaa 21329381  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  21329382 gaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacattacatga 21329481  T
Q  292 at 293  Q
    ||    
T  21329482 at 21329483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 26011721 - 26012021
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||| ||||||||  | |||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||||||| ||||||    
T  26011721 atgtgtaataatgattaagaaagattctaaattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagt 26011820  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||||| ||| ||| ||||| ||||| |||||||||| |||||||||| ||| | ||||||  ||||||||||||||||||    
T  26011821 agaggccttcgcctcgcgagttgtctagttacagaatgctttgtt-aggttaaatgtgatctttgtcacacgagttgatgtgagttgatcttggaggtta 26011919  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||| | || |||||||||||||||| || | |||||||| || ||||||   ||||||||||||||||||||||||||||||    
T  26011920 gaaactaagttgtttatcttgttattgttgtttcagtaagcctgaactatataatctgatgttgttgttgatgttatataattgtatatacattacatga 26012019  T
Q  292 at 293  Q
    ||    
T  26012020 at 26012021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 21741240 - 21741489
Alignment:
Q  11 atgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc 110  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||| |||||| ||  ||||| ||||||||||||||| ||||||||||||| ||    
T  21741240 atgaataggaaagattatagattgagattgaacctggaatagtttaagaacgaatttatgtgagttgcacctgaactcgccatggcgagtagaggctctc 21741339  T
Q  111 t--ttgt-------ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagt 201  Q
       | ||       ||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  21741340 gcctcgtgagctaaccagttacataatgtcttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttggaggttagaaactaagt 21741439  T
Q  202 tatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 251  Q
    || ||| |||| |||| |  || ||||||||||  |||||||| ||||||    
T  21741440 taattaccttgatgttgtcattccagtaagcctggattgtatattctaat 21741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 293
Target Start/End: Original strand, 21501974 - 21502142
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttag-aaactaagttatttatcttgctgttattgttt 224  Q
    |||||||||||  ||||||||||||| |||||||||| | |||||| |||||||||||||| ||||| |||||||||| |||||||||||||| ||||||    
T  21501974 aatgccttgttg-ggttaaatgcgatatttgtcgcacgagttgatgttagttgatcttggaagttagaaaactaagttgtttatcttgctgttgttgttt 21502072  T
Q  225 cagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||||||||| ||||  ||| ||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  21502073 cagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatatacattacatgaat 21502142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 21565978 - 21565677
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||| |||||||||||| |  | ||| ||||||||||||||| |||||     
T  21565978 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttcgtgaattgtacctgaactcgccatggcgagc 21565879  T
Q  101 agaggctat--ctttgt-------ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| |  | | ||       | ||| ||| |||| |||||||| || |||||||||||||||||||| | ||||||  |||||||||| |||||||    
T  21565878 agaggctctcgcctcgtgagctaactagttacagaatgacttgtttatgtaaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtta 21565779  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||| |||| |||||  |||||| || |    ||| |  | || |||||   |||||||||||||||||||||||||||||||    
T  21565778 gaaactaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatga 21565679  T
Q  292 at 293  Q
    ||    
T  21565678 at 21565677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 22959220 - 22959519
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||| ||||||||||||||  |  |||||||||||||||||| |||||    
T  22959220 atgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttt-agaatgaatttttgtgaactgaacctgaactcgccatggcgag 22959318  T
Q  100 tagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
    |||||||| ||           |  | ||| ||| ||||||||||||||||||||||||||  |||| |||||| ||||||  |||||||||| ||||||    
T  22959319 tagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaatgcgattcttgttgcacaagttgatgtgagttgatcttagaggtt 22959418  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacat 289  Q
    | |||| ||||| ||||||||| |||| ||||| ||||||| || |    ||| |||| ||| ||| |   |||||||||||||||||||||||||||||    
T  22959419 aaaaaccaagttgtttatcttgttgtttttgttccagtaagactgatgcatatgaatc-aatgttggttaaaatgttatataattgtatatacattacat 22959517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22144484 - 22144378
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||||||| ||||  ||||||||||||||||||||||    
T  22144484 atgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagttacacctgaactcgccatagcgagt 22144385  T
Q  101 agaggct 107  Q
    |||||||    
T  22144384 agaggct 22144378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 5888872 - 5889032
Alignment:
Q  11 atgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc 110  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||  ||||| ||||||||||||||| ||||||||||||| ||    
T  5888872 atgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggctctc 5888971  T
Q  111 tt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
               |  ||| | ||| |||||||||||||||||||||||||||||||||||||    
T  5888972 gcctcgcgagctacccatttacagaatgccttgtttaggttaaatgcgatctttgtcgcac 5889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 19669334 - 19669094
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||    || ||||||||||||| || | ||| ||||||||||||||| ||| |    
T  19669334 atgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtgaattgtacctgaactcgccatggcgtg 19669235  T
Q  100 tagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
    |||||||| ||           |  | ||| ||| ||||||||||||||| |||||| |||  ||||||||||| ||||||  |||||||||| ||||||    
T  19669234 tagaggctctcgcctcaccagctaactagttacagaatgccttgtttaggataaatgtgattcttgtcgcacaagttgatgtgagttgatcttagaggtt 19669135  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||  ||||||||| |||| ||||| |||||||    
T  19669134 agaaactaagtcgtttatcttgttgttgttgttccagtaag 19669094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 293
Target Start/End: Original strand, 20026760 - 20026926
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| || ||||||| || | ||||||||| | | ||||  |||||||||| ||||| |||||||||||| ||||||||| |||  |||||||    
T  20026760 aatgccttgtt-agcttaaatgtgaccgttgtcgcacgagtcgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgtagttgtttc 20026858  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||||||| |||| |||  | |||| ||||||  |||| |||||| |||||||||||||||||||||    
T  20026859 agtaagcctgaattatatgttttaatgttgttgataatgctatatagttgtatatacattacatgaat 20026926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 19660666 - 19660822
Alignment:
Q  135 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    |||||||| ||||| ||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| ||||||| ||    
T  19660666 tttaggttgaatgcaatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagact 19660765  T
Q  235 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
     |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  19660766 gatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 19660822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21498704 - 21498773
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||| ||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  21498704 atgtataataattattaggagagattgtagattgagattgaacctggaatagttgaagaataaatttttg 21498773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 293
Target Start/End: Original strand, 22178064 - 22178205
Alignment:
Q  152 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 251  Q
    ||||||| ||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||| |||||||||||| |||||||| ||| ||   ||    
T  22178064 ctttgtcacacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaaacctaaattatatgattggat 22178163  T
Q  252 attgttgcgaatgttatataattgtatatacattacatgaat 293  Q
     |||||   ||||| |||||| ||||||| ||||||||||||    
T  22178164 gttgttaataatgtgatataaatgtatatgcattacatgaat 22178205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21985834 - 21985882
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  21985834 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 21985882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 22120013 - 22120049
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  22120013 aatgccttgtttaggttaaatgcgatctttgtcgcac 22120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36154515 - 36154562
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga 48  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||    
T  36154515 atgtctaataatgattaggaaagaatgtagagtgagattgaacctgga 36154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1096901 - 1096795
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| || ||  |||||||||| ||||||   ||  |||||||| |||||| | |   ||||||||||||||  ||||||    
T  1096901 atgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaacttttggaaatctgacctgaactcgccacggcgagt 1096802  T
Q  101 agaggct 107  Q
    |||||||    
T  1096801 agaggct 1096795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23390183 - 23390293
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatg-aatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||   ||  |||||| || || ||| | |   ||||||||||||||| |||||    
T  23390183 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgag 23390282  T
Q  100 tagaggctatc 110  Q
    |||||||||||    
T  23390283 tagaggctatc 23390293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9078386 - 9078338
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||| | || ||| |||||||||||||||||    
T  9078386 atgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaa 9078338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24494002 - 24493954
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  24494002 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 24493954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24529655 - 24529607
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  24529655 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 24529607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 24767157 - 24767193
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||| ||||||||||||||    
T  24767157 aatgccttgtttaggttaaatgtgatctttgtcgcac 24767193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11580932 - 11580979
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga 48  Q
    |||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  11580932 atgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 11580979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 36314715 - 36314685
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  36314715 aatgttatataattgtatatacattacatga 36314685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8286540 - 8286589
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    ||||||||||||||||| |||||| || ||  ||||||||||||||||||    
T  8286540 atgtctaataatgattaagaaagaatgtaggatgagattgaacctggaat 8286589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20026550 - 20026619
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||| |||| |||||||    
T  20026550 atgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttg 20026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21292668 - 21292717
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||| ||||||||||| || ||  ||||||||||||||||||    
T  21292668 atgtctaataataattaggaaagaatgtaggatgagattgaacctggaat 21292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 21741487 - 21741528
Alignment:
Q  261 aatgttatataattgtatatacattacatgaatcatgatgat 302  Q
    |||||||||||||||||||||||||| |||||| ||| ||||    
T  21741487 aatgttatataattgtatatacattatatgaattatgttgat 21741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13025744 - 13025696
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  13025744 atgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 13025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13095928 - 13095880
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  13095928 atgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 13095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19660524 - 19660572
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| ||  || ||||||| |||||||||    
T  19660524 atgtctaataatgattaggaaagaatgtggaatgagattaaacctggaa 19660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 21329582 - 21329618
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  21329582 tgcatgagtcggtctaagttgattaagatgatgatgt 21329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 21501919 - 21501947
Alignment:
Q  79 acctgaactcgccatagcgagtagaggct 107  Q
    |||||||||||||||||||||||||||||    
T  21501919 acctgaactcgccatagcgagtagaggct 21501947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 21502241 - 21502277
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  21502241 tgcatgagtcggtctaagttgattaagatgatgatgt 21502277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22119880 - 22119928
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  22119880 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 13374 - 13074
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||    
T  13374 atgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagt 13275  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           |  ||||| ||| ||||||||||| |||||||||| |||||||||| ||| | ||||||  |||||||| ||||| |||    
T  13274 agaggccctcgcctcgcgagctaaccagttacagaatgccttgtt-aggttaaatgtgatctttgtcacacgagttgatgtgagttgatcatggagatta 13176  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  13175 gaaactaagttatttatcttgctgttgttgtttcagtaagcctgaattggataatctaatgttgttgctaatgttatataattgtatatacattacacga 13076  T
Q  292 at 293  Q
    ||    
T  13075 at 13074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 18066 - 18223
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  || ||||| ||| ||| ||||||||||||  ||||||  ||||| ||||||||||||||||     
T  18066 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatctcactgttgttgtttcagtaagcctg 18165  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| |||  | | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  18166 aattatatgttttgatgttgttattaatgtgatataaatgtatatgcattacatgaat 18223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 715 - 1020
Alignment:
Q  1 atgtctaataatgattaggaaagattg------gagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccata 94  Q
    |||| ||||||||||||||||||||||      ||||||||||||||||||| ||||||||||| ||| |||||  | ||||| ||||||||||||| ||    
T  715 atgtataataatgattaggaaagattgtagattgagattgagattgaacctgtaatagtttaaggatggattttgtg-agttgcacctgaactcgcctta 813  T
Q  95 gcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttgg 185  Q
    ||||||||||||  ||          ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  814 gcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtttaggttaaatgcgatctttgtcgcgcaagttgatgttagttgatcttgg 913  T
Q  186 aggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacatt 285  Q
    | ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  914 aagttagaaactaagttatttatcttgttgttgttgtttcagtaagcctgaattgta-aatctaatgttgttgctaatgttatataattgtatatacatt 1012  T
Q  286 acatgaat 293  Q
    ||||||||    
T  1013 acatgaat 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 1119 - 1155
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  1119 tgcatgagtcggtctaagttgattaagatgatgatgt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 14234924 - 14234622
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||| ||||||||||||||||  |||||||||||||||| | ||||||| |||||||||||||||| ||||| ||||||||||||||| ||||||    
T  14234924 atgtataatgatgattaggaaagattatagattgagattgaacccgaaatagtt-aagaatgaatttttgggagttgcacctgaactcgccatggcgagt 14234826  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           |  ||||| ||| |||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||||    
T  14234825 agaggccctcgcctcgcaagctaaccagttacagaatgccttgtttaggttaaatgtgatctttgtcgaacaagttgatgttagttgatcttggaggtta 14234726  T
Q  192 gaaactaagttatttatcttgctgttattgt--ttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacat 289  Q
    ||||||||||||||||||||| |||| ||||  |||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14234725 gaaactaagttatttatcttgttgttgttgttgttcagtaagcctgaattgtttaatctaatgttgttgctaatgttatataattgtatatacattacat 14234626  T
Q  290 gaat 293  Q
    ||||    
T  14234625 gaat 14234622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 15471358 - 15471059
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||  | ||||  ||||||||||||||| ||||||    
T  15471358 atgtataatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaattttgag-agttacacctgaactcgccatggcgagt 15471260  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           || ||||| ||| ||||| ||||||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||    
T  15471259 agaggccctcgcctcgtgaactgcccagttacagaatgctttgtttaggttaaatgcgatctttgtcgcacgagttgatgttagatgatcttggaggtta 15471160  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||||| |||| ||| ||||||  ||||||  |||||||||||||||||||||||||||||||    
T  15471159 gaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattatatgatctaa-gttgttgttaatgttatataattgtatatacattacatga 15471061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 11 - 302
Target Start/End: Original strand, 1465106 - 1465406
Alignment:
Q  11 atgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc 110  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||| ||  ||||| ||||||||| ||||| ||||||||||||| ||    
T  1465106 atgattatgaaagattgtagattgagattgaacctggaataatttaagaacgaatttgtgtgagttgcacctgaacttgccatggcgagtagaggctctc 1465205  T
Q  111 tt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagt 201  Q
               |  ||||| ||| |||||||||||||||||||| |  ||||||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  1465206 gcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagtaatctttgtcgcacgagttgatgtgagttgatcttggaggttagaaactaagt 1465305  T
Q  202 tatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatga 301  Q
    |||||| |||| || | |  || ||||||||||  ||||| || |||||| ||| ||  ||||||||| ||||||||||||||||||||||| ||| |||    
T  1465306 tatttaccttgatgctgtcattccagtaagcctggattgtttattctaatgttgatgataatgttatacaattgtatatacattacatgaattatgttga 1465405  T
Q  302 t 302  Q
    |    
T  1465406 t 1465406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 16097764 - 16097463
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| ||   ||| ||||||||||||||  | ||| ||||||||||||||| | ||||    
T  16097764 atgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatgaatttttgtgaattggacctgaactcgccatggtgagt 16097665  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           |  | ||| ||| |||| |||||||| ||||||||||||||||||||||| | ||||||  |||||||||| ||| |||    
T  16097664 agaggctctcgcctcgcgagctaactagttacaaaatgtcttgtttatgttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagagatta 16097565  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| |||||||||||||| ||||| ||||||| || |    ||| |  | || |||||   |||||||||||||||||||||||||||||||    
T  16097564 gaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatga 16097465  T
Q  292 at 293  Q
    ||    
T  16097464 at 16097463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 32308099 - 32307872
Alignment:
Q  4 tctaataatgattaggaaagattggagattgagattgaacct-ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtag 102  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| | |||| ||||||||||| || | | ||||||||||||||||| ||||| ||    
T  32308099 tctaataatgattaggaaagattggagaatgagattgaacctaggaagacttta-gaatgaattttgggaact-gaacctgaactcgccatggcgagcag 32308002  T
Q  103 aggctatct------------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
    ||||| ||             ||||   || ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||||    
T  32308001 aggctctcgcctcgcgagtacttgt---gttacataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtt 32307905  T
Q  191 agaaactaagttatttatcttgctgttattgtt 223  Q
    |||||||||||| ||||||||||||| ||||||    
T  32307904 agaaactaagttgtttatcttgctgtcattgtt 32307872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 12933997 - 12934236
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||   ||| |||||||| |||||  |  |||||||||||||||||| |||||     
T  12933997 atgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaattttgtgaactgaacctgaactcgccatggcgagc 12934096  T
Q  101 agaggctatct------------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggagg 188  Q
    |||| || ||             ||||   || ||| | | ||||||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||    
T  12934097 agagactctcgcctcgcgagtacttgt---gttacagacttccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagagg 12934193  T
Q  189 ttagaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||||| ||||||||||||| |||||| |||||||    
T  12934194 ttagaaactaagttgtttatcttgctgtcattgttccagtaag 12934236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 49667770 - 49668009
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||   ||| |||||||| | |||  |  |||||||||||||||||| |||||     
T  49667770 atgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaatattgtgaactgaacctgaactcgccatggcgagc 49667869  T
Q  101 agaggctatct------------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggagg 188  Q
    ||||||| ||             ||||   || ||| | ||||||||||||||||||| ||||||||||||||| | ||||||  |||||||||| ||||    
T  49667870 agaggctctcgcctcgcgagtacttgt---gttacagactgccttgtttaggttaaatacgatctttgtcgcacgagttgatgtgagttgatcttagagg 49667966  T
Q  189 ttagaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||||| ||||||||||||| |||||| |||||||    
T  49667967 ttagaaactaagttgtttatcttgctgtcattgttccagtaag 49668009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 324669 - 324563
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||| ||| |||||||||||   ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  324669 atgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagt 324570  T
Q  101 agaggct 107  Q
    |||||||    
T  324569 agaggct 324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 49389331 - 49389616
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | | |||| |||||||||||  | | | ||||||||||||||||| |||||    
T  49389331 atgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttta-gaatgaattttgtgaact-gaacctgaactcgccatggcgag 49389428  T
Q  100 tagaggctatctttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaa 199  Q
     |||||      || ||   || || | | ||||||||||||||||||||||| ||||||||| | ||||||   ||||||||| |||||||||||||||    
T  49389429 cagagg------ttctcgcctcgcagactaccttgtttaggttaaatgcgatccttgtcgcacgagttgatgtgtgttgatcttagaggttagaaactaa 49389522  T
Q  200 gttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||| ||||||||| |||| ||||| ||||||| || |    ||| |  | || |||||   |||||||||||||||||||||||||| ||||||    
T  49389523 gttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattaaatgaat 49389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 128 - 293
Target Start/End: Complemental strand, 16104079 - 16103914
Alignment:
Q  128 tgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcag 227  Q
    |||||||||||||||||||||| |||||||||||| | ||||||  |||| ||||| |||||||||||||||||| |||||||||||||| ||||| |||    
T  16104079 tgccttgtttaggttaaatgcgctctttgtcgcacgagttgatgtgagttaatcttagaggttagaaactaagttgtttatcttgctgttgttgttccag 16103980  T
Q  228 taagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||||    ||| |  | || |||||   |||||||||||||| ||||||||||| ||||||    
T  16103979 taagactaatccatatgaattgatgttgtttataatgttatataattttatatacattaaatgaat 16103914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 1644505 - 1644608
Alignment:
Q  128 tgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcag 227  Q
    ||||||||||| ||||||||||||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||||||||| |||    
T  1644505 tgccttgtttaagttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttattgttccag 1644604  T
Q  228 taag 231  Q
    ||||    
T  1644605 taag 1644608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2050888 - 2050992
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  |||||||||||||||| |||||||| ||||  |||||||||| |||||||||||    
T  2050888 atgtgtaataatgattaggaaagattctagattgagattgaacc--gaatagtttaagaatggatttttgggagttacacctgaactctccatagcgagt 2050985  T
Q  101 agaggct 107  Q
    |||||||    
T  2050986 agaggct 2050992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52523414 - 52523519
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||||||| |||||||||||||  || |||| ||||||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||||||||    
T  52523414 atgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatggatttttgggagttacacctgaactcgccatagcgagt 52523513  T
Q  101 agaggc 106  Q
    ||||||    
T  52523514 agaggc 52523519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 9513344 - 9513104
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||   ||| |||||||| |||| || |  | ||||||||||| |||| |||||    
T  9513344 atgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaactaaacctgaactcaccatggcgag 9513245  T
Q  100 tagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
     ||||||| ||         ||  |   || ||| ||||||||| ||| ||||||||||||||||||||||||| || |||  |||| ||||| ||||||    
T  9513244 cagaggctctcgcctcgagattacttgtgttacagaatgccttgcttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatcttagaggtt 9513145  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||| |||| |||| |||||||||| |||||||    
T  9513144 agaaactaagttgtttaccttgttgttattgttccagtaag 9513104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 9521319 - 9521079
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||   ||| |||||||| |||| || |  | ||||||||||| |||| |||||    
T  9521319 atgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaactaaacctgaactcaccatggcgag 9521220  T
Q  100 tagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
     ||||||| ||         ||  |   || ||| ||||||||| ||| ||||||||||||||||||||||||| || |||  |||| ||||| ||||||    
T  9521219 cagaggctctcgcctcgagattacttgtgttacagaatgccttgcttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatcttagaggtt 9521120  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||| |||| |||| |||||||||| |||||||    
T  9521119 agaaactaagttgtttaccttgttgttattgttccagtaag 9521079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 13210148 - 13210240
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgtta 218  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||| |||||    
T  13210148 aatgccttgtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgttgtta 13210240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 37250996 - 37251153
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||| | || ||||||||||| | ||||||  |||||||||||| ||| |||||||||||| |||||||| ||||| ||||| ||||||| ||     
T  37250996 ttaggttaaaagtgacctttgtcgcacgagttgatgtgagttgatcttgggggtaagaaactaagttgtttatcttactgttgttgttccagtaagtctg 37251095  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  37251096 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 37251153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 53070386 - 53070491
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||||||||||||| || ||| |||||||||||||||| ||  ||||||||||| ||||||| || || ||||||||||||||| |||||    
T  53070386 atgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-attaagaatgaactttttggaagctg-acctgaactcgccatggcgag 53070483  T
Q  100 tagaggct 107  Q
    ||||||||    
T  53070484 tagaggct 53070491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 22110180 - 22110337
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    ||||||| |||| || ||||||||||| | ||||||  |||||||| ||  ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  22110180 ttaggtttaatgtgacctttgtcgcacgaattgatgtgagttgatcatgagggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 22110279  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||||||| || | |  |||||   ||||| |||||| ||||||  ||||||||||||    
T  22110280 aattgtatgatttgaagttgttaataatgtgatataaatgtatacgcattacatgaat 22110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 12171925 - 12171992
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttaga 193  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||  |||||||||| |||||||||    
T  12171925 aatgccttgtttaggttaaatgcgattcttgtcgcacaagttgatgtgagttgatcttagaggttaga 12171992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 43927425 - 43927322
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    ||||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  43927425 ttaggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 43927326  T
Q  236 aatt 239  Q
    ||||    
T  43927325 aatt 43927322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17247973 - 17248079
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||   ||| ||||||||  ||||| | |   ||||||||||||||| |||||     
T  17247973 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagc 17248072  T
Q  101 agaggct 107  Q
    |||||||    
T  17248073 agaggct 17248079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1644370 - 1644475
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg-gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||| ||| | ||| |||||||| |||||  |  |||||||||||||||||| |||||    
T  1644370 atgtctgataatgattaggaaagattagagaatgagattgaacctgagaagacttt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgag 1644467  T
Q  100 tagaggct 107  Q
     |||||||    
T  1644468 cagaggct 1644475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16104214 - 16104168
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg 47  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  16104214 atgtctaataatgattaggaaagattggagaatgaggttgaacctgg 16104168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40213408 - 40213514
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||   ||  |||||||| |||||| | |  |||||||||||||||  |||||     
T  40213408 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaatctaacctgaactcgccacggcgagc 40213507  T
Q  101 agaggct 107  Q
    |||||||    
T  40213508 agaggct 40213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 42386840 - 42386739
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaat-ttttggtagttgaacctgaactcgccatagcgagtagag 104  Q
    |||||||||||||| |||| |  ||| || ||||||||||| ||||||| |||||||||  |||||| ||||  ||||||||||||||| ||||||||||    
T  42386840 taataatgattaggcaagactttagactgtgattgaacctgaaatagtt-aagaatgaaacttttgggagttatacctgaactcgccatggcgagtagag 42386742  T
Q  105 gct 107  Q
    |||    
T  42386741 gct 42386739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 12340057 - 12340017
Alignment:
Q  122 acataatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  12340057 acataatgccttgtttaggttaaatgtgatctttgtcgcac 12340017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14573022 - 14572974
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  14573022 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 14572974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 14665906 - 14665870
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  14665906 aatgccttgtttaggttaaatgcgatctttgtcgcac 14665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 14735419 - 14735383
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  14735419 aatgccttgtttaggttaaatgcgatctttgtcgcac 14735383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37250799 - 37250869
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  37250799 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 37250869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 605983 - 606048
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||||||||||||| ||  ||  ||||||||||||||||||||| ||||||| |||| ||||||||    
T  605983 taataatgattaggcaattttctagattgagattgaacctggaaaagtttaaaaatggatttttgg 606048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20698134 - 20698183
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20698134 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 4588608 - 4588644
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4588608 aatgccttgtttaggttaaatgcgagctttgtcgcac 4588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11424450 - 11424498
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||| | || ||| |||||||||||||||||    
T  11424450 atgtctaataatgattaggaaataatgtagaatgagattgaacctggaa 11424498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14179756 - 14179708
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  14179756 atgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 14179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 14669061 - 14669025
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||||||||||||||||||||| |||||||||||||||    
T  14669061 aatgccttgtttaggttaaattcgatctttgtcgcac 14669025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17488291 - 17488243
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  17488291 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17499773 - 17499725
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  17499773 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18438968 - 18438920
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || | | |||||||||||||||||    
T  18438968 atgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaa 18438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26687321 - 26687273
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  26687321 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 26687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Original strand, 12174216 - 12174246
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  12174216 aatgttatataattgtatatacattacatga 12174246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Original strand, 13210284 - 13210314
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  13210284 aatgttatataattgtatatacattacatga 13210314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23275175 - 23275106
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||| |||| |||||||    
T  23275175 atgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttg 23275106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12340186 - 12340138
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  12340186 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 12340138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 12378424 - 12378360
Alignment:
Q  7 aataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    ||||||||||||| | | ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  12378424 aataatgattaggcatgtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12378360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13442708 - 13442660
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||| | || ||  |||||||||||||||||    
T  13442708 atgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 13442660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21837934 - 21837866
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaattttt 69  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||| |||| ||||||    
T  21837934 atgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggattttt 21837866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25476072 - 25476120
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    ||||||||||||||||| |||||| || ||| |||||| ||||||||||    
T  25476072 atgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaa 25476120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 4e-75; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 6520802 - 6520493
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||||  ||||  ||||||| ||||||| ||||||    
T  6520802 atgtctaataataattaggaaagattggagattaagactgaacctgaaatagtttaagaatggatttttgagagttagacctgaattcgccatggcgagt 6520703  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           || ||| | ||| ||||| ||||| |||||||||||||||||||| |||  | ||||||  ||||||||||||||||||    
T  6520702 agaggccctcgcctcgcaaactgcccaattacagaatgctttgtt-aggttaaatgcgatctttgttgcatgagttgatgtgagttgatcttggaggtta 6520604  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  6520603 gaaactaagttatttatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacattacatga 6520504  T
Q  292 atcatgatgat 302  Q
    || ||| ||||    
T  6520503 attatgttgat 6520493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 38854938 - 38855247
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||  | ||||  ||||||||||||||| ||||||    
T  38854938 atgtctaataatgattaggaaagattggagattaagatttaacctggaatagtttaagaacgaattttgag-agttacacctgaactcgccatggcgagt 38855036  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||| ||||| ||| ||||||||| ||||||||||  ||||||||||||||| | ||||||  | |||||||||||  |||    
T  38855037 agaggccctcgcctcgcgaattgcccagttacagaatgccttgcttaggttaaacacgatctttgtcgcacgagttgatgtgaattgatcttggacatta 38855136  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    | ||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  38855137 ggaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacattatatga 38855236  T
Q  292 atcatgatgat 302  Q
    || ||| ||||    
T  38855237 attatgttgat 38855247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 44 - 292
Target Start/End: Complemental strand, 21285989 - 21285733
Alignment:
Q  44 ctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttg 134  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||| || ||||||||||||  ||          ||| ||||| ||| ||||| |||    
T  21285989 ctggaatagtttaagaatgaatttttgggagttacacctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaatgctttg 21285890  T
Q  135 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    || |||||||||||||||||| |||||| | ||||||  |||||||||| ||||| |||||||||||  ||||||||| |||| ||||||||||||||||    
T  21285889 tt-aggttaaatgcgatctttatcgcacgagttgatgtgagttgatcttagaggtaagaaactaagtgctttatcttgttgttgttgtttcagtaagcct 21285791  T
Q  235 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaa 292  Q
     |||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  21285790 gaattatataatctaatattgttgttaatgatatataattgtatatacattacatgaa 21285733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 21674139 - 21673845
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||| ||||||||| ||||  ||||| ||||||||||||||| ||||||    
T  21674139 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatatttgtgagttgcacctgaactcgccatggcgagt 21674040  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||| |  || ||| ||||||||||||||| ||||||||||||||||||||||| || |||  ||||||| || |||||||    
T  21674039 agaggccctcgcctcgcgaattgacttgttacagaatgccttgtttaggataaatgcgatctttgtcgcacaagttaatgtgagttgatattagaggtta 21673940  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacatta 286  Q
     ||||||||||  |||||||| |||| |||||||||||||| | ||||  ||| ||||||| ||||||  |||| |||||||||||||||||||||    
T  21673939 aaaactaagtt-gttatcttgttgttgttgtttcagtaagcttgaattaatatgatctaatgttgttgttaatggtatataattgtatatacatta 21673845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 23760527 - 23760840
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| || ||| ||||  ||||||||| ||||  ||||||    
T  23760527 atgtctaataatgattaggaaatattggatattgagattgaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccaaggcgagt 23760626  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||| | ||| ||| ||||||||||| ||| ||||||||||||||||||||||| ||||||  |||||||||| |||||||    
T  23760627 agaggccctcgcctcgcgaattgactagttacaaaatgccttgtt-aggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggtta 23760725  T
Q  192 gaaactaagttattta---tcttgctgttattgtttcagtaagcctaaat-tgtataatctaatattgttgcgaatgttatataattgtatatacattac 287  Q
     |||||||||| ||||   | ||| |||| |||||||||||||||| |||   ||| ||||||| ||||||  |||| |||||||||||||||||||||     
T  23760726 aaaactaagttgtttaccttgttgttgttgttgtttcagtaagcctgaataaatatgatctaatgttgttgttaatggtatataattgtatatacattat 23760825  T
Q  288 atgaatcatgatgat 302  Q
    |||||| ||| ||||    
T  23760826 atgaattatgttgat 23760840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26355385 - 26355616
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||    || ||||||||||||||  | ||| ||||||||| ||||| ||||||    
T  26355385 atgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaatttttgtgaattgtacctgaacttgccatggcgagt 26355484  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           |  | ||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||||| |||||||    
T  26355485 agaggctctcgcctcacgagctaactagttacagaatgccttgtttatgttaaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggtta 26355584  T
Q  192 gaaactaagttatttatcttgctgttattgtt 223  Q
    ||||||||||| ||||||||  ||||||||||    
T  26355585 gaaactaagttgtttatctttttgttattgtt 26355616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 39834259 - 39834160
Alignment:
Q  8 ataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 107  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||||||||| |||||||||||||    
T  39834259 ataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggct 39834160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19801114 - 19801218
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| | |||| | |||||||||||||||||||||||||| ||| || ||| ||||  ||||||||||||||| ||||||    
T  19801114 atgtctaataatgattaggaaagactagagaataagattgaacctggaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgagt 19801213  T
Q  101 agagg 105  Q
    |||||    
T  19801214 agagg 19801218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 126 - 291
Target Start/End: Original strand, 5866097 - 5866261
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  5866097 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 5866195  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  5866196 agtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 5866261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 291
Target Start/End: Complemental strand, 17141206 - 17141050
Alignment:
Q  135 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    |||||||| |||||||||||||||   | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| ||||||| ||    
T  17141206 tttaggttgaatgcgatctttgtcattcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagact 17141107  T
Q  235 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
     |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  17141106 gatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 17141050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 293
Target Start/End: Original strand, 983248 - 983391
Alignment:
Q  153 tttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatc---ttgctgttattgtttcagtaagcctaaattgtataatcta 249  Q
    |||||||||| | |||||   ||||||||||||||||  ||||||||||| ||||||   ||| |||| ||||||||||||| || |||| ||| ||  |    
T  983248 tttgtcgcacgagttgatatgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgttgtttcagtaagtctgaattatatgattga 983347  T
Q  250 atattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    || ||||||  |||||||||||  ||||||||||||||||||||    
T  983348 atgttgttgataatgttatatagctgtatatacattacatgaat 983391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 291
Target Start/End: Complemental strand, 21491293 - 21491129
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||| |||||||||||||| |  | | || |||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  21491293 aatgcctt-tttaggttgaatgcgatctttgtagttcgagttaatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 21491195  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  21491194 agtaagactgatgcctatgaattaatgttgcttataatgttatataattgtatatacattacatga 21491129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 17266821 - 17266978
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || |||| |||||| | ||||||  ||||||||  || ||| ||||||||||||  ||||||| ||||| |||||||||| |||||     
T  17266821 ttaggttaaatgtgacctttatcgcacgagttgatgtgagttgatcacgggggtaagaaactaagttgcttatcttactgttgttgtttcagtgagcctg 17266920  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||| ||||    
T  17266921 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacaagaat 17266978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 293
Target Start/End: Complemental strand, 20498839 - 20498698
Alignment:
Q  152 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 251  Q
    ||||||| ||| | ||||||  |||||||||||||||| |||||||||||| ||||||||| ||||  |||||| ||||| || |  | ||| || | ||    
T  20498839 ctttgtcacacgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgatgttgatgtttcggtaagactgatgtatatgatttgat 20498740  T
Q  252 attgttgcgaatgttatataattgtatatacattacatgaat 293  Q
     |||||   ||||| ||||||||||||||||||||| |||||    
T  20498739 gttgtttataatgtgatataattgtatatacattacttgaat 20498698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 22364954 - 22364797
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  ||||||||  || | | | ||||||||||  ||||||| ||||| ||||||||||||||||     
T  22364954 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcagggggataataaactaagttgcttatcttactgttgttgtttcagtaagcctg 22364855  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   || || |||||| ||||||| ||||||||||||    
T  22364854 aattatatgatttgatgttgttaataaagtgatataaatgtatatgcattacatgaat 22364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41598618 - 41598512
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||| |||||| || ||| |||||||||||||||||   ||| ||||||||  ||||| | |   ||||||||||||||| |||||     
T  41598618 atgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagc 41598519  T
Q  101 agaggct 107  Q
    |||||||    
T  41598518 agaggct 41598512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 291
Target Start/End: Complemental strand, 21249682 - 21249519
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||||||||||||||||||||  ||| ||||||  |||| ||||| |||||||| |||||||||  ||| | |||||||| ||| ||    
T  21249682 aatgcctt-tttaggttaaatgcgatctttgtcgttcaagttgatgtgagtttatcttagaggttaggaactaagtt-gttaccctgctgttaatgtctc 21249585  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    | |||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  21249584 actaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 21249519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 37116641 - 37116484
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    ||||| |||||| || |||||||| || | ||||||  || ||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  37116641 ttaggataaatgtgacctttgtcgtacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 37116542  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    | ||  || || | || |||||   ||||| ||||| |||||||| ||||||||||||    
T  37116541 atttagatgatttgatgttgttaataatgtgatatatttgtatatgcattacatgaat 37116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 24353316 - 24353156
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatct---tgctgttattgtttcagtaagc 232  Q
    ||||| |||||| || ||||||||||| | ||||||  |||||||| ||| | | ||||||||||||  ||||||   || |||| ||||||||||||||    
T  24353316 ttaggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatggggataagaaactaagttgcttatcttactgttgttgttgtttcagtaagc 24353217  T
Q  233 ctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    || |||| ||| || | || |||||   ||| | |||||| ||||||| ||||||||||||    
T  24353216 ctgaattatatgatttgatgttgttaataatatgatataaatgtatatgcattacatgaat 24353156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5865964 - 5866009
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  5865964 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 5866009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17141347 - 17141302
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  17141347 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 17141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 291
Target Start/End: Complemental strand, 21255520 - 21255357
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||||||||||||||||||||  | | ||||||  |||| ||||| |||||||| |||||||||  ||| | |||||||| ||| ||    
T  21255520 aatgcctt-tttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatcttagaggttaggaactaagtt-gttaccctgctgttaatgtctc 21255423  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    | |||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  21255422 actaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 21255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45130718 - 45130767
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  45130718 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 45130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6759691 - 6759643
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  6759691 atgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 6759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18878924 - 18878972
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  18878924 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18878972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21255653 - 21255605
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  21255653 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 21255605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21491426 - 21491382
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacct 45  Q
    |||||||||||||||||||||||| || ||| |||||||||||||    
T  21491426 atgtctaataatgattaggaaagaatgtagaatgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20499094 - 20499024
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||  | ||||||| |||| ||||||||    
T  20499094 atgtataataatgattaggtaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 20499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22875499 - 22875393
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||| |||  ||| ||||||||||||   ||| ||||||||  ||||| | |   |||||||||||||||  ||||     
T  22875499 atgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatgacgagc 22875400  T
Q  101 agaggct 107  Q
    |||||||    
T  22875399 agaggct 22875393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24353534 - 24353464
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||  |||| ||||||||    
T  24353534 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttataaatggatttttgg 24353464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16092028 - 16092073
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||| ||||||    
T  16092028 atgtctaataatgattaggaaagaatgtagaatgagattaaacctg 16092073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 25362842 - 25362887
Alignment:
Q  5 ctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||| || ||  ||||||||||||||||||    
T  25362842 ctaataatgattaggaaagaatgtaggatgagattgaacctggaat 25362887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31971678 - 31971629
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||  || ||  ||||||||||||||||||    
T  31971678 atgtctaataatgattaggaaaggatgtaggatgagattgaacctggaat 31971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 6520404 - 6520368
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6520404 tgcatgagtcggtctaagttgattaagatgatgatgt 6520368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7373183 - 7373135
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  ||| |||||||||||||    
T  7373183 atgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 7373135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 17439122 - 17439186
Alignment:
Q  7 aataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    ||||||||||||| ||| ||  |||||| |||||||||||| | ||||||| |||| ||||||||    
T  17439122 aataatgattaggcaagtttttagattgggattgaacctgggaaagtttaaaaatggatttttgg 17439186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18818097 - 18818145
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||| | || ||  |||||||||||||||||    
T  18818097 atgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 18818145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20536642 - 20536594
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||| ||||||||||||||||| || ||  |||||||||||||||||    
T  20536642 atgtctgataatgattaggaaagaatgtaggatgagattgaacctggaa 20536594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21249815 - 21249767
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  ||||| |||||||||||    
T  21249815 atgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 21249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22627169 - 22627125
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacct 45  Q
    |||||||||||||||||||||||| || ||  |||||||||||||    
T  22627169 atgtctaataatgattaggaaagaatgtaggatgagattgaacct 22627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23406815 - 23406767
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  23406815 atgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 23406767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 38855336 - 38855372
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  38855336 tgcatgagtcggtctaagttgattaagatgatgatgt 38855372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 4e-75; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 22921554 - 22921856
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||  || |||||||||||| ||||||    
T  22921554 atgtctaataatgattaggaaagattggagattgagattgaaccaggaatagtttaagaacgaatttttgagagttagacttgaactcgccatggcgagt 22921653  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           || | ||| ||| |||||||||||| |||||||||||||||||||||||| | ||||||  |||||||||| |||||||    
T  22921654 agaggctctcgcctcgcgaactgcctagttacagaatgccttgtttgggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtta 22921753  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| ||||||| ||||||  |||||||||||||||||||||||||| |||    
T  22921754 gaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatatacattatatg 22921853  T
Q  291 aat 293  Q
    |||    
T  22921854 aat 22921856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 6 - 293
Target Start/End: Complemental strand, 20637279 - 20636983
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagagg 105  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||| |||||||||||    
T  20637279 taatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaatttttgtgagttgcacctgaactcgccatggcgagtagagg 20637180  T
Q  106 ctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaac 196  Q
    || ||           |   |||| ||| |||| ||||||||||||||| |||||||||||||||  | ||||||  |||||||||||||||||||||||    
T  20637179 ctctcgcctcgcgagctaatcagttacagaatgtcttgtttaggttaaaagcgatctttgtcgcatgagttgatgtgagttgatcttggaggttagaaac 20637080  T
Q  197 taagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||||||||| |||| |||| |  || |||||||||| ||||||||  | |||| ||| ||  |||||||||||||||||||||||||| ||||||    
T  20637079 taagttatttaccttgatgttgtcattccagtaagcctgaattgtattttttaatgttgatgataatgttatataattgtatatacattatatgaat 20636983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 302
Target Start/End: Original strand, 35981383 - 35981683
Alignment:
Q  11 atgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc 110  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| ||  ||||| ||||||||||||||| | ||||||||||| ||    
T  35981383 atgattaggaaagattgtagattgagattgaacctgggatagtttaagaacgaatttatgtgagttgcacctgaactcgccatggtgagtagaggctctc 35981482  T
Q  111 tt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagt 201  Q
               |  | ||| ||| |||||||||||||||||||| |||||||||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  35981483 gcctcgcgagctaactagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgaattgatgtgagttgatcttggaggttagaaactaagt 35981582  T
Q  202 tatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatga 301  Q
    ||||||||||| |||| |  || ||||||||||  |||||||| |||||| ||| ||  ||||||||||||||| |||||||||| |||||| ||| |||    
T  35981583 tatttatcttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataatgttatataattgcatatacattatatgaattatgttga 35981682  T
Q  302 t 302  Q
    |    
T  35981683 t 35981683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 33681443 - 33681142
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||| ||||||||||||||  ||||| ||||||||||||||| |||||     
T  33681443 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtgagttgcacctgaactcgccatggcgagc 33681344  T
Q  101 agaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          ||  ||||| ||| | ||||||| ||| ||||||||||||||||||| ||| | ||||||  |||||||||| |||||||    
T  33681343 agaggctctcgcctcgcgaattacccagttacagagtgccttgcttatgttaaatgcgatctttgtcacacgagttgatgtgagttgatcttagaggtta 33681244  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||| |||| |||||  |||||| || |    ||| |  | || |||||   |||||||||||||||||||||||||||||||    
T  33681243 gaaactaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatga 33681144  T
Q  292 at 293  Q
    ||    
T  33681143 at 33681142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 52927668 - 52927968
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||   |||  ||||||||||||   ||||  ||||||||||||||| ||||||    
T  52927668 atgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatgaattttttaaagttagacctgaactcgccatggcgagt 52927767  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| | ||||||  |||||||||| |||||||    
T  52927768 agaggccctcgcctcgcgaattgaccagttacagaatgccttgtt-aggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtta 52927866  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||||| || ||||| ||||||| || |    ||| |  | || |||||   |||||||||||||||||||||||||||||||    
T  52927867 gaaactaagttgtttatcttgctattgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatga 52927966  T
Q  292 at 293  Q
    ||    
T  52927967 at 52927968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 116 - 286
Target Start/End: Complemental strand, 49261651 - 49261481
Alignment:
Q  116 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 215  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||| |||| ||    
T  49261651 ccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatg 49261552  T
Q  216 ttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacatta 286  Q
    || |  || |||||||||  ||||||||| |||||| ||| ||  ||||||||||||||||||||||||||    
T  49261551 ttgtccttccagtaagccggaattgtatattctaatgttgatgataatgttatataattgtatatacatta 49261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 20248711 - 20248481
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| | | ||| ||||||||||||||  |  |||||||||||||||||| |||||    
T  20248711 atgtctaataatgattaggaaagatcggagaatgagattgaacctggagagacttt-agaatgaatttttgtgaactgaacctgaactcgccatggcgag 20248613  T
Q  100 tagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
    |||||||||||           |  | ||| ||| |||||||| |||||||||||||||||  ||||||||||| ||||||  | |||||||| ||||||    
T  20248612 tagaggctatcgcctcgcgagctaactagttacagaatgccttatttaggttaaatgcgattcttgtcgcacaagttgatgtaaattgatcttagaggtt 20248513  T
Q  191 agaaactaagttatttatcttgctgttattgt 222  Q
    |||||||||||||||||||||| |||| ||||    
T  20248512 agaaactaagttatttatcttgatgttgttgt 20248481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 22238063 - 22237841
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||||||   |||  |||||||||||  | ||||| || |||||||||||| ||||||    
T  22238063 atgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattttggaatgaattttgtg-agttgcacttgaactcgccatggcgagt 22237965  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||          ||| | ||| ||| |||||||||||||||||||||||||||||| |||||| | ||||||  |||||||||| |||||||    
T  22237964 agaggccctcgcctcgcgaattgactagttacagaatgccttgtttaggttaaatgcgatctttttcgcacgagttgatgtgagttgatcttagaggtta 22237865  T
Q  192 gaaactaagttatttatcttgctg 215  Q
    ||||||||||| ||||||||||||    
T  22237864 gaaactaagttgtttatcttgctg 22237841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 28194145 - 28194241
Alignment:
Q  11 atgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 107  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||  ||||| ||||||||||||||| || ||||||||||    
T  28194145 atgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcaagtagaggct 28194241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 126 - 293
Target Start/End: Original strand, 21861389 - 21861555
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| |||||||||| ||  |||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||| || |||||||    
T  21861389 aatgccttgtt-aggttaaatgtgacatttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctattgttgtttc 21861487  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||||||| |||  ||| || | || |||||   ||||| ||||||||||||||||||||| |||||    
T  21861488 agtaagcctgaatattatgatatgatgttgtttataatgtgatataattgtatatacattacttgaat 21861555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 12271848 - 12271744
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| |||||||||||||||    
T  12271848 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttc 12271750  T
Q  226 agtaag 231  Q
    ||||||    
T  12271749 agtaag 12271744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 293
Target Start/End: Original strand, 21896078 - 21896241
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| || || |||||||||||| |||||||   |||| |||||||    
T  21896078 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagatgtaagaaactaagttgtttatct---tgttgttgtttc 21896173  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||||||| |||  ||| || | || |||||   ||||| |||||||||||||||||||||||||||    
T  21896174 agtaagcctgaatattatgatttgatgttgtttataatgtgatataattgtatatacattacatgaat 21896241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 16368115 - 16368272
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| | | ||| ||||| |||||| |||||||| ||||| ||||||||||||||||     
T  16368115 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcataggggtaagaaattaagttgtttatcttactgttgttgtttcagtaagcctg 16368214  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  16368215 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 16368272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 21754469 - 21754232
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacct-ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||| | ||| |||||||| |||||  |  |||||||||||||||||| |||||    
T  21754469 atgtctaataatgattaggaaagattggagaaagagattgaacctgggaagacttt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgag 21754372  T
Q  100 tagaggctatc-tttgtccag--------tcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
     ||||||| ||   |  | ||        | ||| | ||||||| |||||||||||| |||| ||||||||| | ||||||  |||||||||  ||||||    
T  21754371 cagaggctctcgcctcgcgagtacttgttttacagactgccttg-ttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatctcagaggtt 21754273  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||| ||||||||||||| |||||| |||||||    
T  21754272 agaaactaagttgtttatcttgctgtcattgttccagtaag 21754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 50686905 - 50686748
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    ||||| |||||| || ||||||||||| | |||| |  |||||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  50686905 ttaggataaatgtgacctttgtcgcacgagttgacgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 50686806  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| |||  || |||||   ||||| |||||| ||||||| ||||||||||||    
T  50686805 aattatatgatccgatgttgttaataatgtgatataaatgtatatgcattacatgaat 50686748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 20918902 - 20918798
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||  |||| |||| ||||| |||| |    
T  20918902 aatgcctt-tttaggttgaatgcgatctttgtcgttcgacttgatgtgagttgatcttagaggttagaaactaagtcgtttaccttgttgttaatgttcc 20918804  T
Q  226 agtaag 231  Q
    ||||||    
T  20918803 agtaag 20918798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43697794 - 43697727
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttt 68  Q
    ||||||| | |||||||| |||||||  ||||||||||| |||||||||||||||||||||| |||||    
T  43697794 atgtctatttatgattagaaaagattctagattgagatttaacctggaatagtttaagaatggatttt 43697727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 433441 - 433335
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||| |||||||||||||||| || ||| |||||||||||||||||   ||| ||||||||  ||||| | |   ||||||||||||||| |||||     
T  433441 atgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagc 433342  T
Q  101 agaggct 107  Q
    |||||||    
T  433341 agaggct 433335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50209900 - 50209948
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  50209900 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 50209948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26065428 - 26065358
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  26065428 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 26065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34510214 - 34510108
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||   ||  |||||||| |||||| | |   ||||||||||||||  |||||     
T  34510214 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggaaatctgacctgaactcgccacggcgagc 34510115  T
Q  101 agaggct 107  Q
    |||||||    
T  34510114 agaggct 34510108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 50687102 - 50687032
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  50687102 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 50687032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20919035 - 20918990
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  20919035 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 20918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22355872 - 22355921
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  22355872 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22355921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22357558 - 22357607
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  22357558 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22357607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 21861186 - 21861250
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| |||||||    
T  21861186 taataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttg 21861250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22532703 - 22532655
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22532703 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 21895924 - 21895975
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaa 57  Q
    |||||||||||||||||| ||  ||||||||||||||||||| | |||||||    
T  21895924 taataatgattaggaaagtttttagattgagattgaacctgggaaagtttaa 21895975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50613727 - 50613794
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttt 68  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||| ||||||||||    
T  50613727 atgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50613794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50621555 - 50621622
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttt 68  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||| ||||||||||    
T  50621555 atgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50621622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Original strand, 14295508 - 14295538
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  14295508 aatgttatataattgtatatacattacatga 14295538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16367897 - 16367967
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||| ||||||||||| |||||||  ||| ||||||||    
T  16367897 atgtataataatgattaggcaagtttttagattgagaatgaacctggaaaagtttaaagatggatttttgg 16367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 20918768 - 20918738
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  20918768 aatgttatataattgtatatacattacatga 20918738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35260742 - 35260812
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||  | ||||||| |||| ||||||||    
T  35260742 atgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 35260812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41049655 - 41049725
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||| ||||| ||| ||  ||||||||||||||||||| | ||||| | |||||||||||||    
T  41049655 atgtataataatggttaggcaagtttttagattgagattgaacctgggaaagtttgaaaatgaatttttgg 41049725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 51130728 - 51130698
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  51130728 aatgttatataattgtatatacattacatga 51130698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16093503 - 16093572
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||| ||||||||||| || ||| ||  ||||||||||||||||||||| |||| || |||| |||||||    
T  16093503 atgtataataatgatttggcaagtttttagattgagattgaacctggaaaagttaaaaaatggatttttg 16093572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20846917 - 20846966
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    ||||||||||||||||||| |||| || ||  ||||||||||||||||||    
T  20846917 atgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 20846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21027103 - 21027054
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    ||||||||||||||||||| |||| || ||  ||||||||||||||||||    
T  21027103 atgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 21027054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 293
Target Start/End: Complemental strand, 22237791 - 22237762
Alignment:
Q  264 gttatataattgtatatacattacatgaat 293  Q
    ||||||||||||||||||||||||||||||    
T  22237791 gttatataattgtatatacattacatgaat 22237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27250427 - 27250476
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  || |||||||||||||||    
T  27250427 atgtctaataatgattaggaaagaatgtaggatgggattgaacctggaat 27250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38801089 - 38801138
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  || |||||||||||||||    
T  38801089 atgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaat 38801138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 41049864 - 41050021
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||| ||| || ||||||||||  | ||||||  |||||||| | | ||| || ||||| |||  ||||||| ||||| ||||||||||||||||     
T  41049864 ttaggttatatgtgacctttgtcgcatgagttgatgtgagttgatcataggggtaaggaactaggtttcttatcttactgttgttgtttcagtaagcctg 41049963  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | |  |||||   ||||| ||||| |||||||| |||||| |||||    
T  41049964 aattatatgatttgacgttgttaataatgtgatatatttgtatatgcattacttgaat 41050021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 50613945 - 50614101
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  | ||||||  || ||| |||||||||||| ||| |||| | ||| ||  ||||||||||||     
T  50613945 ttaggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcaggg-ggtaagaaactaagttgtttgtcttaccgttgttacttcagtaagcctg 50614043  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || ||| |   ||||| |||||| ||||||| ||||||||||||    
T  50614044 aattatatgatttgatgttgatattaatgtgatataaatgtatatgcattacatgaat 50614101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 50621773 - 50621929
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  | ||||||  || ||| |||||||||||| ||| |||| | ||| ||  ||||||||||||     
T  50621773 ttaggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcaggg-ggtaagaaactaagttgtttgtcttaccgttgttacttcagtaagcctg 50621871  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || ||| |   ||||| |||||| ||||||| ||||||||||||    
T  50621872 aattatatgatttgatgttgatattaatgtgatataaatgtatatgcattacatgaat 50621929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 13212991 - 13213027
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  13212991 tgcatgagtcggtctaagttgattaagatgatgatgt 13213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20135621 - 20135573
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  20135621 atgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 20135573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 28194265 - 28194305
Alignment:
Q  122 acataatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||| |||| ||||||||||||| ||||||||||||||||||    
T  28194265 acaaaatgtcttgtttaggttacatgcgatctttgtcgcac 28194305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 8 - 293
Target Start/End: Complemental strand, 23019834 - 23019541
Alignment:
Q  8 ataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 107  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||     
T  23019834 ataatgattaggaaagattttagattgagattgaacctggaatattttaagaatgaatttttgggagttacacctgaactcgccatggcgagtagaggcc 23019735  T
Q  108 at---ct------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaacta 198  Q
     |   ||      ||||||| | ||| ||||| ||| |||||||||||||||||||||||| || | ||||||  |||||||||||||||||||||||||    
T  23019734 cttgcctcgcgagttgtccaattacaaaatgc-ttggttaggttaaatgcgatctttgtcgaacgagttgatgtgagttgatcttggaggttagaaacta 23019636  T
Q  199 agttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| |||||||||||||| |||||||||||||||| || | ||||||||||| | ||||  |||||||||||||||||||||||||||||||||    
T  23019635 agttgtttatcttgctgttgttgtttcagtaagcctgaactatataatctaatgtcgttgttaatgttatataattgtatatacattacatgaat 23019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 19652629 - 19652390
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||    || ||||||||||||||  | ||| ||||||||||||||| ||||||    
T  19652629 atgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaattgtacctgaactcgccatggcgagt 19652530  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           |  | ||| ||| ||| ||||||||||| ||||||||||||||||||||| | ||||||  |||||||||| |||||||    
T  19652529 agaggctctcgcctcgcgggctaactagttacaaaataccttgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtta 19652430  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  19652429 gaaactaagttgtttatcttgctgttattgttccagtaag 19652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 22080424 - 22080719
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||| ||| || ||| ||||  ||||||||||||||| ||||||    
T  22080424 atgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacgaacttatgggagttatacctgaactcgccatggcgagt 22080523  T
Q  101 agaggctatc------------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggagg 188  Q
    ||||||| ||            | ||||   | ||| ||  |||||||||||   ||||||||| ||||||||| | ||||||  |||||||||| ||||    
T  22080524 agaggctctcgcctcgcgagcttgtgtc---tgacagaacaccttgtttaggaataatgcgatccttgtcgcacgagttgatgtgagttgatcttagagg 22080620  T
Q  189 ttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattg-tataatctaatattgttgcgaatgttatataattgtatatacatta 286  Q
    ||||||||||||||  |||||||||| || |||||||||||||||||||||| ||| | |||||  |||||  |||||||||||| |||||||||||||    
T  22080621 ttagaaactaagttgcttatcttgctcttgttgtttcagtaagcctaaattgatatgacctaatgatgttgttaatgttatataaatgtatatacatta 22080719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 291
Target Start/End: Complemental strand, 1561607 - 1561437
Alignment:
Q  122 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 221  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||||||||| |     
T  1561607 acataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaata 1561508  T
Q  222 tttcagtaagcctaaattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    || ||||||| || |    ||| ||| |||| ||| |   |||||||||||||||||||||||||||||||    
T  1561507 ttccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatga 1561437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 27332971 - 27333236
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||| ||||||||||||||||  ||| |||| ||||||||||||   ||| |||||||| |||||  ||||| ||||||||||||||| ||||||    
T  27332971 atgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaagttttgtgagttgcacctgaactcgccatggcgagt 27333070  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           || ||| | ||| ||||| ||||| |||||||||| |||| ||||||||| | ||||||  |||||||||| |||||||    
T  27333071 agaggctctcgcctcgcgaactgcccaattacagaatgctttgtt-aggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggtta 27333169  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttg 258  Q
    |||||||| || ||||||||| ||||  ||||||||||||||| |||||||||||| ||| ||||||    
T  27333170 gaaactaaattgtttatcttgatgttgctgtttcagtaagcctgaattgtataatccaatgttgttg 27333236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 27393711 - 27393976
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||| ||||||||||||||||  ||| |||| ||||||||||||   ||| |||||||| |||||  ||||| ||||||||||||||| ||||||    
T  27393711 atgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaagttttgtgagttgcacctgaactcgccatggcgagt 27393810  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           || ||| | ||| ||||| ||||| |||||||||| |||| ||||||||| | ||||||  |||||||||| |||||||    
T  27393811 agaggctctcgcctcgcgaactgcccaattacagaatgctttgtt-aggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggtta 27393909  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttg 258  Q
    |||||||| || ||||||||| ||||  ||||||||||||||| |||||||||||| ||| ||||||    
T  27393910 gaaactaaattgtttatcttgatgttgctgtttcagtaagcctgaattgtataatccaatgttgttg 27393976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 19668664 - 19668507
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| ||     
T  19668664 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgctgttgttgtttcagtaagtctg 19668565  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |  | ||| || || | ||||||  ||||||||||| |||||||||||||||||||||    
T  19668564 atgtatatgatgtagtgttgttgataatgttatatagttgtatatacattacatgaat 19668507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 25644745 - 25644651
Alignment:
Q  12 tgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggc 106  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||||||||    
T  25644745 tgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggatttttgggagttacacccgaactcgccatagcgagtagaggc 25644651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 126 - 291
Target Start/End: Original strand, 28496294 - 28496458
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||| |||||||||| |||| |    
T  28496294 aatgccttgtttaggttaa-tgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttcc 28496392  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  28496393 agtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatga 28496458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 126 - 291
Target Start/End: Original strand, 29808705 - 29808869
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||| |||||||||| |||| |    
T  29808705 aatgccttgtttaggttaa-tgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttcc 29808803  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  29808804 agtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatga 29808869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 9098370 - 9098457
Alignment:
Q  152 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt 239  Q
    ||||||||||| | ||||||  |||||||||| ||||| ||||||||| || |||||||||| |||||||||||||||||||| ||||    
T  9098370 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaatttgtttatcttgcagttattgtttcagtaagcctgaatt 9098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25956308 - 25956414
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||| | |||| | |||||||  ||||||||||| |||||||||||||||||||||| |||||| | ||||  ||||| | ||||||| ||||||    
T  25956308 atgtctaattacgattggaaaagattctagattgagatttaacctggaatagtttaagaatggattttttggagttacacctgtattcgccatggcgagt 25956407  T
Q  101 agaggct 107  Q
    |||||||    
T  25956408 agaggct 25956414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 4185512 - 4185616
Alignment:
Q  3 gtctaataatgattaggaaagattggagattgagattgaacctggaat-agtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagta 101  Q
    ||||||||| ||||| |||||| || ||| |||||||||||||||||  |||||| |||||||||||||  |  |||||||||||||||||| |||||||    
T  4185512 gtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagttta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagta 4185610  T
Q  102 gaggct 107  Q
    ||||||    
T  4185611 gaggct 4185616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 4667902 - 4668006
Alignment:
Q  3 gtctaataatgattaggaaagattggagattgagattgaacctggaat-agtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagta 101  Q
    ||||||||| |||||||||||| || ||| |||||||| ||||||||  |||||| |||||||||||||  |  |||||||||||||||||| |||||||    
T  4667902 gtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagta 4668000  T
Q  102 gaggct 107  Q
    ||||||    
T  4668001 gaggct 4668006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18457148 - 18457043
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||||||||||||| || ||| |||||||||||||||| ||  ||||||||||| ||||||| || || ||||||||| ||||| |||||    
T  18457148 atgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-attaagaatgaactttttggaagctg-acctgaactagccatggcgag 18457051  T
Q  100 tagaggct 107  Q
    ||||||||    
T  18457050 tagaggct 18457043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 35008442 - 35008344
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    ||||| |||||| || |||||| |||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||||||||||||||||||||    
T  35008442 ttaggataaatgtgacctttgttgcacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttattgtttcagtaagcct 35008344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 4189388 - 4189284
Alignment:
Q  3 gtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagta 101  Q
    ||||||||| |||||||||||| || ||| |||||||| |||||| || ||||| ||||||||||||||  |  ||||||| |||||| ||| |||||||    
T  4189388 gtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttt-agaatgaatttttgtgaactgaacctaaactcgtcatggcgagta 4189290  T
Q  102 gaggct 107  Q
    ||||||    
T  4189289 gaggct 4189284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 4674749 - 4674853
Alignment:
Q  3 gtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagta 101  Q
    ||||||||| |||||||||||| || ||| |||||||| |||||| || ||||| ||||||||||||||  |  ||||||| |||||| ||| |||||||    
T  4674749 gtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttt-agaatgaatttttgtgaactgaaccttaactcgtcatggcgagta 4674847  T
Q  102 gaggct 107  Q
    ||||||    
T  4674848 gaggct 4674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 20109417 - 20109354
Alignment:
Q  152 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 215  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||||    
T  20109417 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctg 20109354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29808570 - 29808677
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||| ||||| || ||| ||||||||||||||| || | ||| ||||||||  ||||| | |   ||||||||||||||| |||||    
T  29808570 atgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgag 29808669  T
Q  100 tagaggct 107  Q
     |||||||    
T  29808670 cagaggct 29808677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19303228 - 19303273
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  19303228 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 19303273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20360658 - 20360707
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20360658 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20637981 - 20638030
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20637981 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20638030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1561737 - 1561689
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    ||||||||||||||||||||||||  | ||| |||||||||||||||||    
T  1561737 atgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 1561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18409514 - 18409562
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    ||||||| |||||||||||||||| || ||| |||||||||||||||||    
T  18409514 atgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 18409562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22779914 - 22779962
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22779914 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22779962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28496160 - 28496208
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  28496160 atgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 28496208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 23077024 - 23076926
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    ||||| |||||| || |||||| |||  | ||||||  |||||||| ||| ||| ||||||||| ||  ||||||| ||||| ||||||||||||||||    
T  23077024 ttaggataaatgtgacctttgttgcatgagttgatgtgagttgatcatgggggtaagaaactaatttgcttatcttactgttgttgtttcagtaagcct 23076926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19023883 - 19023814
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||  | ||||||| |||| |||||||    
T  19023883 atgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttg 19023814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 25629045 - 25629090
Alignment:
Q  4 tctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||| |||||||||||||| |||| ||| |||||||||||||||||    
T  25629045 tctattaatgattaggaaatattgtagaatgagattgaacctggaa 25629090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 9098467 - 9098499
Alignment:
Q  261 aatgttatataattgtatatacattacatgaat 293  Q
    |||||||||||||| ||||||||||||||||||    
T  9098467 aatgttatataattatatatacattacatgaat 9098499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 17287881 - 17287917
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  17287881 tgcatgagtcggtctaagttgattaagatgatgatgt 17287917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 25714453 - 25714417
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  25714453 tgcatgagtcggtctaagttgattaagatgatgatgt 25714417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 27333303 - 27333339
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  27333303 tgcatgagtcggtctaagttgattaagatgatgatgt 27333339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 27394043 - 27394079
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  27394043 tgcatgagtcggtctaagttgattaagatgatgatgt 27394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 39705975 - 39706284
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||  | ||||  ||||||||||||||| ||||||    
T  39705975 atgtctaataatgattaggaaagattgaagattaagattgaacctggaatagtttaagaacgaattttgag-agttacacctgaactcgccatggcgagt 39706073  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           || ||||| ||| ||||| ||||||||||||||||||||||||||||||| | ||||||  |||||||||||||| |||    
T  39706074 agaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttggagatta 39706173  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    | || |||||| |||||||||||||| |||||| ||||||||| |||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  39706174 ggaattaagttgtttatcttgctgttgttgttttagtaagcctgaattatatgatctaatgttgttgctaatgttatataattgtatatacattacatga 39706273  T
Q  292 atcatgatgat 302  Q
    || ||| ||||    
T  39706274 attatgttgat 39706284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 15099774 - 15099474
Alignment:
Q  11 atgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| ||    
T  15099774 atgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggctctc 15099675  T
Q  111 tt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagt 201  Q
               |  ||||| ||| |||| ||||||||||||||| |||||||||||||||  | ||||||  ||||||||||||||||||||||||||||    
T  15099674 gcctcgcgagctaaccagttacagaatgtcttgtttaggttaaaagcgatctttgtcgcatgagttgatgtgagttgatcttggaggttagaaactaagt 15099575  T
Q  202 tatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatga 301  Q
    |||||| |||| |||| |  || ||||||||||  |||||||| |||||| ||| ||  |||||||||||||||||||||||||| |||||| ||| |||    
T  15099574 tatttaccttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataatgttatataattgtatatacattatatgaattatgttga 15099475  T
Q  302 t 302  Q
    |    
T  15099474 t 15099474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 15190751 - 15190441
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||| |||||||| |||| ||  ||||||||||| |||||||||||||||||||||| ||||||||  |||  | ||| ||||||||| ||||||    
T  15190751 atgtctaattatgattagaaaaggttctagattgagatttaacctggaatagtttaagaatggatttttgggcgttacatctgtactcgccatggcgagt 15190652  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           |  ||||| ||| |||||||||||||||||||| |||||||||||||||| | ||||||  |||||||||||| |||||    
T  15190651 agaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttgggggtta 15190552  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||| |||| |||| |  || ||||||||||  |||||||| |||||| ||| ||  |||||||||||||||||||||||||| ||||    
T  15190551 gaaactaagttatttaccttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataatgttatataattgtatatacattatatga 15190452  T
Q  292 atcatgatgat 302  Q
    || ||| ||||    
T  15190451 attatgttgat 15190441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 8846809 - 8846507
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||| ||||||||||||| || ||||| |||| |||||||||| |||||    
T  8846809 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgagttgcaccttaactcgccatggcgag 8846710  T
Q  100 tagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
    |||||||| ||           |  | ||| ||| |||| |||||||| ||||||||||||||||||||||| | ||||||  |||||| ||| ||| ||    
T  8846709 tagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttatgttaaatgcgatctttgtcgcacgagttgatgtgagttgaacttagagatt 8846610  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
    |||||||||||| |||||||||  ||| ||||| ||||||| || |    ||| |  | || |||||   ||||||||||||||||||||||||||||||    
T  8846609 agaaactaagttgtttatcttgtagttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatg 8846510  T
Q  291 aat 293  Q
    |||    
T  8846509 aat 8846507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 12288038 - 12288195
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    ||||||| |||| ||  ||||||||| || ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  12288038 ttaggtttaatgtgacttttgtcgcataagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 12288137  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  12288138 aattatatgatttaatgttgttggtaatgttatatagttgtatatacattacatgaat 12288195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 12774297 - 12774194
Alignment:
Q  128 tgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcag 227  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||    
T  12774297 tgccttgtttaggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccag 12774198  T
Q  228 taag 231  Q
    ||||    
T  12774197 taag 12774194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15464616 - 15464722
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||  |||  |||||||||| |||||||||||    
T  15464616 atgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggatttttgggtgttacacctgaactcaccatagcgagt 15464715  T
Q  101 agaggct 107  Q
    |||||||    
T  15464716 agaggct 15464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43198275 - 43198381
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||  |||||||| ||||  |||||||||| |||||||||||    
T  43198275 atgtgtaataatgattaggaaagattttagattgagattgaacatggaatagtttaagaattgatttttgggagttacacctgaactcaccatagcgagt 43198374  T
Q  101 agaggct 107  Q
    |||||||    
T  43198375 agaggct 43198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 52242880 - 52242986
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||| ||||||||||  ||| |||||||||||||||||||||||||||||| ||| |||| ||||  ||||||||||||||||||||||    
T  52242880 atgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagttacacctgaactcgccatagcgagt 52242979  T
Q  101 agaggct 107  Q
    |||||||    
T  52242980 agaggct 52242986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13844973 - 13844867
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||| |||||||| |||||||  ||||  ||||| |||||||||||||||||||||| |||||||| ||||  ||||| ||| ||||| ||||||    
T  13844973 atgtctaattatgattagaaaagattctagatcaagatttaacctggaatagtttaagaatggatttttgggagttacacctgtacttgccatggcgagt 13844874  T
Q  101 agaggct 107  Q
    |||||||    
T  13844873 agaggct 13844867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 53081979 - 53082137
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta-gaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    |||||||||||| ||  |||||||||| | ||||||  |||||||||||| || || |||||||||||  ||||||| ||||| ||||||||||||||||    
T  53081979 ttaggttaaatgtgacatttgtcgcacgagttgatgtgagttgatcttggggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcct 53082078  T
Q  235 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
     |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  53082079 gaattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 53082137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 291
Target Start/End: Complemental strand, 16596946 - 16596782
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||| |||| |||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| ||||      
T  16596946 aatgcctt-tttaggttgaatgtgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttca 16596848  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || |    |||||  |||| ||| |   |||||||||||||||||||||||||||||||    
T  16596847 agtaagactgatgcttataaattaatgttgcttataatgttatataattgtatatacattacatga 16596782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 46640285 - 46640441
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| |||||||||||||||||| |||     
T  46640285 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttatcttactgttattgtttcagtaaacctg 46640383  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||    |||| |||||| ||||||| ||||||||||||    
T  46640384 aattatatgatttgatgttgttaatgatgtgatataaatgtatatgcattacatgaat 46640441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12774432 - 12774327
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| | |  || |||||||| |||||  |  |||||||||||||||||| |||||    
T  12774432 atgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgtt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgag 12774335  T
Q  100 tagaggct 107  Q
     |||||||    
T  12774334 cagaggct 12774327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 22634033 - 22634075
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttg 168  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  22634033 aatgccttgtttaggttaaatgcgatctttgtcgcacgatttg 22634075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 293
Target Start/End: Original strand, 13695 - 13836
Alignment:
Q  152 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 251  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||  ||||  |||| ||||||| || |  | ||| || | ||    
T  13695 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgat 13794  T
Q  252 attgttgcgaatgttatataattgtatatacattacatgaat 293  Q
     |||||   ||||| ||||||||||||||||||||| |||||    
T  13795 gttgtttataatgtgatataattgtatatacattacttgaat 13836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16597079 - 16597031
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  16597079 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 24029042 - 24029006
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  24029042 aatgccttgtttaggttaaatgcgatctttgtcgcac 24029006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 3332186 - 3332151
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgca 161  Q
    ||||||||||||||||||||||||||||||||||||    
T  3332186 aatgccttgtttaggttaaatgcgatctttgtcgca 3332151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 15552106 - 15552039
Alignment:
Q  135 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 202  Q
    ||||||| |||||||||||||||||  | | ||||||  |||||||||| ||||||||||||||||||    
T  15552106 tttaggtaaaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagtt 15552039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 44928613 - 44928716
Alignment:
Q  4 tctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtaga 103  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||   ||| ||||||||  ||||| | |   ||| ||||||||||| ||||| |||    
T  44928613 tctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctgaccagaactcgccatggcgagcaga 44928712  T
Q  104 ggct 107  Q
    ||||    
T  44928713 ggct 44928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12287820 - 12287890
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  12287820 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12287890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 20157112 - 20157146
Alignment:
Q  128 tgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||||||||||||    
T  20157112 tgccttgtttaggttaaatgcgatctttgtcgcac 20157146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53081784 - 53081854
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||| | ||| ||  ||||||||||||||||||||| ||||||| |||| ||||||||    
T  53081784 atgtataataatgattaagcaagtttttagattgagattgaacctggaaaagtttaaaaatggatttttgg 53081854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3097066 - 3097017
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  3097066 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 3097017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7089300 - 7089251
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  7089300 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 7089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12903180 - 12903131
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  12903180 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 12903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15868322 - 15868391
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||| | ||||||| |||  |||||||    
T  15868322 atgtataataatgattaggaaagtttttagattgagattgaacctgggaaagtttaaaaatagatttttg 15868391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15091331 - 15091283
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||| |||||||||||||||||    
T  15091331 atgtctaatattgattaggaaagaatgtagaatgagattgaacctggaa 15091283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22636868 - 22636820
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22636868 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21814990 - 21815095
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||||||||||||| |  ||| ||| | |||||||||| || || ||||||||| ||||||| || ||| | |||||||||||| |||||    
T  21814990 atgtttaataatgattaggaaagaatttagaatgataatgaacctggattaatt-aagaatgaactttttggaagctga-cttgaactcgccatggcgag 21815087  T
Q  100 tagaggct 107  Q
    ||||||||    
T  21815088 tagaggct 21815095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21815319 - 21815424
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||||||||||| | |  ||| ||| | |||||||||| || || ||||||||| ||||||| || ||| |||||||||||||| |||||    
T  21815319 atgtttaataatgattaggaaataatttagaatgataatgaacctggattaatt-aagaatgaactttttggaagctga-cctgaactcgccatggcgag 21815416  T
Q  100 tagaggct 107  Q
    ||||||||    
T  21815417 tagaggct 21815424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21818412 - 21818517
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||||||||||||| |  ||| ||| | |||||||||| || || ||||||||| ||||||| || ||| | |||||||||||| |||||    
T  21818412 atgtttaataatgattaggaaagaatttagaatgataatgaacctggattaatt-aagaatgaactttttggaagctga-cttgaactcgccatggcgag 21818509  T
Q  100 tagaggct 107  Q
    ||||||||    
T  21818510 tagaggct 21818517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 15551981 - 15551951
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  15551981 aatgttatataattgtatatacattacatga 15551951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 16377209 - 16377315
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||| | || ||  ||||||||||||||||||  |   |||||||| |||||| | |   ||||||||||||||  |||||     
T  16377209 atgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatgaacttttgggaatctgacctgaactcgccacggcgagc 16377308  T
Q  101 agaggct 107  Q
    |||||||    
T  16377309 agaggct 16377315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 32851676 - 32851642
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgc 160  Q
    ||||||| |||||||||||||||||||||||||||    
T  32851676 aatgcctggtttaggttaaatgcgatctttgtcgc 32851642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14053000 - 14053049
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||| ||||||    
T  14053000 atgtctaataatgattaggaaagaatgtaggatgagattgaacttggaat 14053049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16239679 - 16239728
Alignment:
Q  1 atgtctaataatgattaggaaag-attggagattgagattgaacctggaa 49  Q
    ||||||||||||||||||||||| | || ||| |||||||||||||||||    
T  16239679 atgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaa 16239728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 13812629 - 13812665
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  13812629 aatgctttgtttaggttaaatgtgatctttgtcgcac 13812665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14039083 - 14039039
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacct 45  Q
    |||||||||||||||| ||||||| || ||| |||||||||||||    
T  14039083 atgtctaataatgatttggaaagaatgtagaatgagattgaacct 14039039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15552247 - 15552199
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||| ||||||||    
T  15552247 atgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 15552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 16270320 - 16270356
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  16270320 tgcatgagtcggtctaacttgatgaagatgatgatgt 16270356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20156977 - 20157025
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  20156977 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 20157025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22633900 - 22633948
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  22633900 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22633948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 39706373 - 39706409
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  39706373 tgcatgagtcggtctaagttgattaagatgatgatgt 39706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 10962 - 10662
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||    
T  10962 atgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatgaatttttgtgagttacacctgaactcgccatagcgagt 10863  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          ||  | |||  || ||||||||||| |||||||||||||||| |||||||| | ||||||  |||||||||| ||||| |    
T  10862 agaggctctcgcctcgcgagttacctagttccaaaatgccttgtt-aggttaaatgcgatctctgtcgcacgagttgatgtgagttgatcttagaggtaa 10764  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  10763 gaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgtcatataattgtatatacattacatga 10664  T
Q  292 at 293  Q
    ||    
T  10663 at 10662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 2331 - 2641
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | | || ||| ||||  ||||||||||||||| ||||||    
T  2331 atgtctaataatgattaggaaagattggagattgagattgaacctggattagtt-aagaacgtacttgtgggagttatacctgaactcgccatggcgagt 2429  T
Q  101 agaggctat---ct------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    |||||| ||   ||      ||| | ||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||| |||||||    
T  2430 agaggccattgcctcgcgaattgactagttacagaatgccttgtttaggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggtta 2529  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
    |||| |||||| |||||||||||| | |||||||||||||||| ||||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||    
T  2530 gaaattaagttgtttatcttgctgatgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatatacattatatg 2629  T
Q  291 aatcatgatgat 302  Q
    ||| ||| ||||    
T  2630 aattatgttgat 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 8450 - 8150
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||||||| ||||||    
T  8450 atgtgtaataatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagt 8351  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
     |||||  ||          ||||||||| ||||||||| ||||| ||||  |||| |||||||||| ||| | ||||||  |||||||||| ||||| |    
T  8350 ggaggccctcgcctcgcgagttgtccagttacataatgctttgtt-aggtataatgtgatctttgtctcacgagttgatgtgagttgatcttagaggtaa 8252  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    | ||||||||| |||||| ||||||| |||||||||||||||| |||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  8251 ggaactaagttgtttatcctgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgttatataattgtatatacattacatga 8152  T
Q  292 at 293  Q
    ||    
T  8151 at 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 7245 - 6946
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||| ||||||||||||||  |  |||||||||||||||||| ||||||    
T  7245 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtgaactgaacctgaactcgccatggcgagt 7146  T
Q  101 agaggctatct--ttgt-------ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||   |||        | ||| ||| ||||||||||||||||||||||||||  ||||||||||| ||||||  |||||||||| |||||||    
T  7145 agaggctctcgccttgcgagctaactagttacagaatgccttgtttaggttaaatgcgattcttgtcgcacaagttgatgtgagttgatcttagaggtta 7046  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| |||||||||||||| ||||| ||||||| || |    ||| |  |||| |||||   |||||||||||||||||||||||||||||||    
T  7045 gaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattaatgttgtttataatgttatataattgtatatacattacatga 6946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 32970 - 32670
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||| |||||||| ||||  ||||||||||||||| ||||||    
T  32970 atgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatggatttttgggagttacacctgaactcgccatggcgagt 32871  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           |  ||||| ||| |||||||||||  |||||||||||||||||||||||| | ||||||  |||||||||| ||||| |    
T  32870 agaggccctcgcctcgcgagctacccagttacagaatgccttgttg-ggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaa 32772  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||| || |||  ||||||||||| |||||||||||||||||||    
T  32771 gaaactaagttgtttatcttgttgttattgtttcagtaagcctgaattatataatctaatgtttttgttaatgttatatagttgtatatacattacatga 32672  T
Q  292 at 293  Q
    ||    
T  32671 at 32670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 121; Significance: 6e-62; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 6971 - 6660
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttt-tggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  || ||| ||||  ||||||||||||||| |||||    
T  6971 atgtctaataataattaggaaagattggagattgagattgaacctggaatagtttaagaacgaaacttgtgggagttatacctgaactcgccatggcgag 6872  T
Q  100 tagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
    | |||||  ||          ||| | ||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  6871 tggaggccctcccctcgcgaattgactagttacaaaatgccttgtttaggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggtt 6772  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacat 289  Q
    | ||||||||||  ||||||||||||| |||||||||||||||| ||||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| ||    
T  6771 aaaaactaagtt-gttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatatacattatat 6673  T
Q  290 gaatcatgatgat 302  Q
    |||| ||| ||||    
T  6672 gaattatgttgat 6660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 8770 - 8666
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  | |||||||| ||||| |||||||||||| |||||||||||| | ||||| |    
T  8770 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcttagaggtaagaaactaagttgtttatcttgctgatgttgttcc 8672  T
Q  226 agtaag 231  Q
    ||||||    
T  8671 agtaag 8666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 118; Significance: 4e-60; HSPs: 4)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 7047 - 6746
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||||| | ||  ||||||||||||||| ||||||    
T  7047 atgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagt 6948  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           |  ||||| | | ||||| ||||||||||||||||||||||||||||||| | ||||||  |||||| ||||||| |||    
T  6947 agaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgaacttggagatta 6848  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||| ||||||| |||||||||||||| |||||| ||||||| | |||| ||| ||||||| ||||||  |||||||||||||||||||||||||||||||    
T  6847 gaatctaagttgtttatcttgctgttgttgttttagtaagcttgaattatatgatctaatgttgttgttaatgttatataattgtatatacattacatga 6748  T
Q  292 at 293  Q
    ||    
T  6747 at 6746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 14427 - 14126
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||||| | ||  ||||||||||||||| ||||||    
T  14427 atgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagt 14328  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           |  ||||| | | ||||| ||||||||||||||||||||||||||||||| | ||||||  |||||| ||||||| |||    
T  14327 agaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgaacttggagatta 14228  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||| ||||||| |||||||||||||| |||||| ||||||| | |||| ||| ||||||| ||||||  |||||||||||||||||||||||||||||||    
T  14227 gaatctaagttgtttatcttgctgttgttgttttagtaagcttgaattatatgatctaatgttgttgttaatgttatataattgtatatacattacatga 14128  T
Q  292 at 293  Q
    ||    
T  14127 at 14126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 6647 - 6611
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6647 tgcatgagtcggtctaagttgattaagatgatgatgt 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 14027 - 13991
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  14027 tgcatgagtcggtctaagttgattaagatgatgatgt 13991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 126 - 293
Target Start/End: Complemental strand, 13068 - 12901
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||  |||||||||| |||||||||||||||||  |||||||||||||| ||||| |    
T  13068 aatgccttgtttaggttaaatgcaatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagtggtttatcttgctgttgttgttcc 12969  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||||||| |||| ||| ||||||| |||||   |||||||||||||||||||||||||||||||||    
T  12968 agtaagcctgaattatatgatctaatgttgttattaatgttatataattgtatatacattacatgaat 12901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 19700 - 19389
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||   ||| |||||||||||||    |||| ||||||||||||||| |||||     
T  19700 atgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatgaatttttatgtgttgcacctgaactcgccatggcgagc 19601  T
Q  101 agaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          |   ||||| ||| |||| |||| ||| ||||||||||||| ||||||||||| ||||||  |||||||||| |||||||    
T  19600 agaggctctcgcctcgcgaatgacccagttacagaatgtcttgcttatgttaaatgcgatccttgtcgcacaagttgatgtgagttgatcttagaggtta 19501  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
    ||||||||||| ||||||||| |||| |||||||||||| ||| | ||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||    
T  19500 gaaactaagttgtttatcttgatgttgttgtttcagtaaccctgatttaatatgatctaatgttgttgttaatggtatataattgtatatacattatatg 19401  T
Q  291 aatcatgatgat 302  Q
    ||| ||| ||||    
T  19400 aattatgttgat 19389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 302
Target Start/End: Original strand, 39863 - 40170
Alignment:
Q  5 ctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagag 104  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||| ||| || ||| ||||  ||||||||| ||||| || |||||||    
T  39863 ctaataatggttaggaaagattggagattgacattcaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccatggcaagtagag 39962  T
Q  105 gctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaa 195  Q
    ||| ||           |  | ||| ||| |||||||| ||||||||||||||||||||||| |||| | ||||||  |||||||||| |||||||||||    
T  39963 gctctcgcctcgcgagctaactagttacaaaatgccttatttaggttaaatgcgatctttgttgcacgagttgatgtgagttgatcttagaggttagaaa 40062  T
Q  196 ctaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatc 294  Q
    ||||||| |||| |||| |||| |||||||||||||||| ||||  ||| |||| || ||||||  |||| ||||||||||||||||||||| ||||||     
T  40063 ctaagttgtttaccttgatgttgttgtttcagtaagcctgaattaatatgatcttatgttgttgttaatggtatataattgtatatacattatatgaatt 40162  T
Q  295 atgatgat 302  Q
    ||| ||||    
T  40163 atgttgat 40170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 126 - 293
Target Start/End: Complemental strand, 100676 - 100508
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||||| || ||||||||||||||||||||||| | ||||||  | ||| |||| |||||||||||||||||| ||||||||| |||| |||||||    
T  100676 aatgccttgtctaagttaaatgcgatctttgtcgcacgagttgatgtgacttgctcttagaggttagaaactaagttgtttatcttgttgttgttgtttc 100577  T
Q  226 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||||||||||||  ||| ||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  100576 agtaagcctaaattaatatgatctaatgttgttgttaatgttatataattgtatatacattatatgaat 100508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 101828 - 101723
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||| ||||||||||||  | | ||| ||||||||||||||| |||||    
T  101828 atgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttt-agaatgaattttgtgaacttg-acctgaactcgccatggcgag 101731  T
Q  100 tagaggct 107  Q
     |||||||    
T  101730 cagaggct 101723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 101690 - 101619
Alignment:
Q  131 cttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 202  Q
    ||||||||||||||||| |||| ||||||||| | ||||||  |||||||||| ||||||||||||||||||    
T  101690 cttgtttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagtt 101619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 8e-49; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 28406413 - 28406119
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| ||   ||| ||||| || |||||  |  |||||||||||||||||| ||||||    
T  28406413 atgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaactgaacctgaactcgccatggcgagt 28406314  T
Q  101 agaggctatctttgtcca---------gtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||      ||         || ||||||||||||||||||||||||||||||| ||||||||| | ||||||  |||||||||| |||||||    
T  28406313 agaggctctcgcctcgcaagtacttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggtta 28406214  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacatt 285  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||| ||  ||| ||||| | ||||||  |||| ||||||||||||||||||||    
T  28406213 gaaactaagttgtttatcttgctgttgttgttttagtaagcctaatttaatatgatctattgttgttgttaatggtatataattgtatatacatt 28406119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 25176276 - 25175975
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||  ||||  ||||||||||||||| ||||||    
T  25176276 atgtctaattatgattaggaaaggttggagattgagattgaacctggaatagtttaagaacagatttttgagagttagacctgaactcgccatggcgagt 25176177  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           ||  |||| ||| ||||||||||||||          ||||||||||||| | ||||||  |||||||||| |||||||    
T  25176176 agaggccctcgcctcgcgaactgcgcagttacagaatgccttgtttag----------atctttgtcgcacgaattgatgtaagttgatcttagaggtta 25176087  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatg 290  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| ||||||| ||||||  |||||||||||||| ||||||| ||| |||    
T  25176086 gaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattatatatacgttatatg 25175987  T
Q  291 aatcatgatgat 302  Q
    ||| ||| ||||    
T  25175986 aattatgttgat 25175975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 293
Target Start/End: Original strand, 7556 - 7718
Alignment:
Q  131 cttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaa 230  Q
    |||| ||||||| |||| || ||||||||||| | ||||||  ||||||||||||||||  ||||||||||| |||||| || |||| ||||||||||||    
T  7556 cttggttaggtttaatgtgacctttgtcgcacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgtttcagtaa 7655  T
Q  231 gcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| |||| ||| || |||| ||||||  ||||| ||||||||||||||||||||| |||||    
T  7656 gcctgaattatatgatttaatgttgttgttaatgtgatataattgtatatacattacttgaat 7718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 293
Target Start/End: Original strand, 18786748 - 18786888
Alignment:
Q  153 tttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaata 252  Q
    |||||||||| | ||||||  ||||||||||||||||  ||||||||||| |||||| ||||||| ||||||||||||||||||||| ||| ||  |||     
T  18786748 tttgtcgcacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgctgttgttgtttcagtaagcctaaattatatgattgaatg 18786847  T
Q  253 ttgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    || |||  ||||||||||| |||||||||||||||||||||    
T  18786848 ttattgataatgttatatagttgtatatacattacatgaat 18786888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 22134038 - 22134141
Alignment:
Q  128 tgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcag 227  Q
    ||||||||||||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| ||| || |||    
T  22134038 tgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcatttttccag 22134137  T
Q  228 taag 231  Q
    ||||    
T  22134138 taag 22134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 23791567 - 23791410
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||| |||| ||||||||||| ||||||||| |||| ||||||||||||||||     
T  23791567 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttgggggttggaaactaagttgtttatcttgttgttgttgtttcagtaagcctg 23791468  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  23791467 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 23791410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 23708314 - 23708411
Alignment:
Q  9 taatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 107  Q
    ||||||||||||||| | | |||||||||||||| | ||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||    
T  23708314 taatgattaggaaagttcgtagattgagattgaatc-ggaatagtttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggct 23708411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 23207570 - 23207413
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||| ||| ||||||||||||  ||||||| ||||| |||||  |||||||||     
T  23207570 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttcaagtaagcctg 23207471  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  23207470 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 23207413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 22459381 - 22459485
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| |||||||||| || |||||||  || | ||||||  |||||| ||| ||||| |||||||||||| ||||||||||||||||||||||    
T  22459381 aatgccttgtt-aggttaaatgtgacctttgtcctacgagttgatgtgagttgaccttagaggtaagaaactaagttgtttatcttgctgttattgtttc 22459479  T
Q  226 agtaag 231  Q
    ||||||    
T  22459480 agtaag 22459485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 25109181 - 25109024
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| ||| | | ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  25109181 ttaggttaaatgtgacctttgtcgcacgagttgatgtaagttgatcatggggataagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 25109082  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||| | |||||| ||||||| ||||||||||||    
T  25109081 aattatatgatttgatgttgttaataatatgatataaatgtatatgcattacatgaat 25109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22133904 - 22133948
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacct 45  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  22133904 atgtctaataatgattaggaaagattggagaatgagattgaacct 22133948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23660456 - 23660408
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  23660456 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 23660408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20309528 - 20309479
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  20309528 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23071650 - 23071695
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  23071650 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 23071695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23654097 - 23654146
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  23654097 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 23654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22337549 - 22337501
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22337549 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22730920 - 22730968
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  22730920 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27754009 - 27753961
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  27754009 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 27753961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 22412753 - 22412816
Alignment:
Q  8 ataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  22412753 ataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 22412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Original strand, 23071906 - 23071936
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  23071906 aatgttatataattgtatatacattacatga 23071936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23076874 - 23076769
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||| ||||||||||| || ||  |||||||| |||||||| || || ||||||||  ||||| | |   ||||||||||||||  ||||||    
T  23076874 atgtctaataataattaggaaagaatgtaggatgagattggacctggaa-agatttagaatgaaactttggaattctgacctgaactcgccacggcgagt 23076776  T
Q  101 agaggct 107  Q
    |||||||    
T  23076775 agaggct 23076769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23207788 - 23207718
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||| | | ||||||| |||| ||||||||    
T  23207788 atgtataataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 23207718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23286284 - 23286235
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||| ||||||    
T  23286284 atgtctaataatgattaggaaagaatgtaggatgagattgaacatggaat 23286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 298502 - 298550
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| |  ||  |||||||||||||||||    
T  298502 atgtctaataatgattaggaaagaatataggatgagattgaacctggaa 298550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 22731319 - 22731355
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  22731319 tgcatgagtcggtctaacttgatgaagatgatgatgt 22731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 15517 - 15764
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| | | ||  || |||||||||||| ||||||    
T  15517 atgtataatgatgattaggaaagattatagattgagattgaacctggaatagtttaagaatggatttttcggaattacacatgaactcgccatggcgagt 15616  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||  ||           |  ||||| ||| ||||||||||||| |||||||| |||||||||||||| | ||||||  |||||||||||||| |||    
T  15617 agaggccctcgcctcgcgagctaaccagttacagaatgccttgtttatgttaaatgtgatctttgtcgcacgagttgatgtgagttgatcttggagatta 15716  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt 239  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  15717 gaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaatt 15764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 15862 - 15898
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  15862 tgcatgagtcggtctaagttgattaagatgatgatgt 15898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 130341 - 130040
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||| | |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||| | ||  |||| |||||||||| |||||     
T  130341 atgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggaattacacctaaactcgccatggcgagc 130242  T
Q  101 agaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||           |  | ||| ||| ||||||||||||||| ||||||||||||||||||||| | ||||||  |||||||||| |||||||    
T  130241 agaggctctcgcctcgcgagctaactagttacaaaatgccttgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtta 130142  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| |||||||||||||| ||||| ||||||| || |    ||| |  | || |||||   |||||||||||||||||||||||||||||||    
T  130141 gaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttacaatgttatataattgtatatacattacatga 130042  T
Q  292 at 293  Q
    ||    
T  130041 at 130040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 60325 - 60395
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||| |||| ||||||||    
T  60325 atgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttgg 60395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 302
Target Start/End: Original strand, 2037 - 2214
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  2037 aatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaaataagttgtttatcttgctgttgttgtttc 2136  T
Q  226 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 302  Q
    ||||||||| | ||  ||| ||| ||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  2137 agtaagcctgatttaatatgatccaatgttgttgttaatggtatataattgtatatacattatatgaattatgctgat 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 116 - 293
Target Start/End: Original strand, 7886 - 8059
Alignment:
Q  116 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 215  Q
    ||||| ||| ||||||||||| ||| ||||||||||||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||||    
T  7886 ccagttacaaaatgccttgtt-agggtaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctg 7984  T
Q  216 ttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
       |||||||||||||||| |||| ||| || |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  7985 ---ttgtttcagtaagcctgaattatatgatttaatgttgttgataatgttatatagttgtatatacattacatgaat 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 29100 - 29204
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  29100 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 29198  T
Q  226 agtaag 231  Q
    ||||||    
T  29199 agtaag 29204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28967 - 29011
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacct 45  Q
    |||||||||||||||||||||||| || ||| |||||||||||||    
T  28967 atgtctaataatgattaggaaagaatgtagaatgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 133087 - 132848
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    || |||||||| |||||  |  |||||||||||||||||| |||||     
T  133087 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcgagc 132988  T
Q  101 agaggctatct------------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggagg 188  Q
    ||||||| ||             |||||   | |||||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||||| ||||    
T  132987 agaggctctcgcctcgcgagtacttgtc---ttacataatgccttgtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatcttagagg 132891  T
Q  189 ttagaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||    
T  132890 ttagaaactaagttgtttatcttactgttgttgttccagtaag 132848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 126 - 302
Target Start/End: Complemental strand, 62496 - 62320
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||||| ||||| ||||||| ||||||| | ||| ||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  62496 aatgccttgtttatgttaa-tgcgatccttgtcgcccgattcgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttc 62398  T
Q  226 agtaagcctaaattg-tataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 302  Q
    ||||||||| ||||| ||| | |||||  |||||  |||||||||||||||||||||||||| |||||| ||| ||||    
T  62397 agtaagcctgaattgttatgaactaatgatgttgttaatgttatataattgtatatacattatatgaattatgttgat 62320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 116 - 302
Target Start/End: Original strand, 14506 - 14693
Alignment:
Q  116 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 215  Q
    ||||| ||| ||||||||||||||| ||||||||||||| ||||||||| ||||||  |||||||||| |||||||||||||||||| | ||||||||||    
T  14506 ccagttacagaatgccttgtttaggataaatgcgatcttggtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtatatcttgctg 14605  T
Q  216 ttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 302  Q
    || |||||||||||||||| | ||  ||| ||||||| || |||  |||| |||||||| |||||||||||| |||||| ||| ||||    
T  14606 ttgttgtttcagtaagcctgatttaatatgatctaatgtttttgttaatggtatataatagtatatacattatatgaattatgttgat 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3366 - 3196
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||  ||||||||||||||| ||||||    
T  3366 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgagt 3267  T
Q  101 agaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||||||  ||          ||| | ||| ||| |||||||||||||||||||||||||||||||||||||    
T  3266 agaggccctcgcctcgtgaattgactagttacagaatgccttgtttaggttaaatgcgatctttgtcgcac 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28496 - 28735
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg-gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  ||| | |||| ||||||| |||||  |  |||||||||||||||||| |||||    
T  28496 atgtctaataatgattaggaaagattggagaatgagattgaacctacgaagacttta-gaatgaaattttgtgaactgaacctgaactcgccatggcgag 28594  T
Q  100 tagaggctatct------------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggag 187  Q
     ||||||| ||             ||||   || ||| ||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||| |||    
T  28595 cagaggctctcgcctcgcgagtacttgt---gttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagag 28691  T
Q  188 gttagaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||    
T  28692 gttagaaactaagttgtttatcttgctgtcattgttccagtaag 28735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 45476 - 45778
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcga 98  Q
    |||||||||||||||||||||||||||| || ||||||||||||||| || | |||| |||||||||||| || | ||| ||||||||||||||| ||||    
T  45476 atgtctaataatgattaggaaagattggggaatgagattgaacctggtaagacttta-gaatgaattttttgtgaattgtacctgaactcgccatggcga 45574  T
Q  99 gtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggt 189  Q
    ||||||||| ||           |  | ||| ||| |||| |||||||||| ||||||||||||||||||||| | ||||||  |||||||||| |||||    
T  45575 gtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggt 45674  T
Q  190 tagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacat 289  Q
    ||||||||||||| ||||| ||||||| |||||| ||||||| || |    ||| |  | || |||||   |||||||||||||||||||||||| ||||    
T  45675 tagaaactaagttgtttatattgctgtaattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacatcacat 45774  T
Q  290 gaat 293  Q
    ||||    
T  45775 gaat 45778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 75; Significance: 2e-34; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 136196 - 136354
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  136196 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 136295  T
Q  236 aattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| | | |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  136296 aattatatgattttaatgttgttgttaatgttatatagttgtatatacattacatgaat 136354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 144904 - 145062
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  144904 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 145003  T
Q  236 aattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| | | |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  145004 aattatatgattttaatgttgttgttaatgttatatagttgtatatacattacatgaat 145062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 62995 - 62913
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctg 83  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||| ||||||||||||||  ||||| |||||    
T  62995 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaatgaatttttgtgagttgcacctg 62913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 135978 - 136048
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||||||||||||    
T  135978 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgg 136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 144686 - 144756
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||||||||||||    
T  144686 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgg 144756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 126 - 302
Target Start/End: Complemental strand, 5944 - 5768
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||| |||||| |||  ||||||||||| ||||||  |||||||||| ||||||| |||||||||| ||||||||| |||| |||||||    
T  5944 aatgccttatttaggctaaatgtgattcttgtcgcacaagttgatgtgagttgatcttagaggttaaaaactaagtt-tttatcttgttgttgttgtttc 5846  T
Q  226 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 302  Q
    ||||||||| ||||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  5845 agtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatatacattatatgaattatgttgat 5768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 6025 - 5964
Alignment:
Q  3 gtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa 64  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6025 gtctaataatgattaggaaagattggagattgagattgaacttggaatagtttaagaatgaa 5964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 103467 - 103624
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||||||||     
T  103467 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttctttatcttcctgttgttgtttcagtaagcctg 103566  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || |||| ||||||  |||||||| || |||||||||||||||||||||    
T  103567 aattatatgatttaatgttgttgttaatgttatgtagttgtatatacattacatgaat 103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 103270 - 103340
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||||||||||||    
T  103270 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgg 103340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 161119 - 160880
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||| ||||||||||||||  |  |||||||||| ||||||| |||||    
T  161119 atgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttt-agaatgaatttttgtgaactgaacctgaagtcgccatggcgag 161021  T
Q  100 tagaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtt 190  Q
    |||||||| ||           |  | ||| ||| |||| |||| ||||| |||||| |||||||||||||| | ||||||  |||||||||| ||||||    
T  161020 tagaggctctcacctcacgaggtaactagttacagaatgtcttggttaggataaatgtgatctttgtcgcacgagttgatgtgagttgatcttagaggtt 160921  T
Q  191 agaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    |||||||||||| ||||||||| |||| ||||||| |||||    
T  160920 agaaactaagttgtttatcttgttgttgttgtttcggtaag 160880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 564 - 334
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||   ||| ||||||||||||||  ||||| ||||||||||||||| |||||     
T  564 atgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatgaatttttgtgagttgcacctgaactcgccatggcgagc 465  T
Q  101 agaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          |   ||||| ||| |||| |||| ||| |||||||||||||||||||| || | ||||||  |||||||||| |||||||    
T  464 agaggctctcgcctcgcgagtgacccagttacagaatgtcttgcttatgttaaatgcgatctttgtcgtacgagttgatgtgagttgatcttagaggtta 365  T
Q  192 gaaactaagttatttatcttgctgttattgtt 223  Q
    |||||| ||||  ||||||||||||| |||||    
T  364 gaaactgagtt-gttatcttgctgttgttgtt 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 293
Target Start/End: Complemental strand, 292 - 264
Alignment:
Q  265 ttatataattgtatatacattacatgaat 293  Q
    |||||||||||||||||||||||||||||    
T  292 ttatataattgtatatacattacatgaat 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 2490 - 2731
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| ||   ||| |||||||| |||  | | | ||||||||||||||||| ||||||    
T  2490 atgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgtgaact-gaacctgaactcgccatggcgagt 2588  T
Q  101 agaggctatct------------ttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggagg 188  Q
    ||||||| ||             ||||   || ||| |||||||||||||||  ||||| |||| ||||||||| | ||||||  |||||||||| ||||    
T  2589 agaggctctcgcctcgcgagtacttgt---gttacagaatgccttgtttaggaaaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagagg 2685  T
Q  189 ttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  2686 ttagaaactaagttgtttatcttgctgttgttgtttcagtaagcct 2731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 293
Target Start/End: Original strand, 10283 - 10527
Alignment:
Q  57 agaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatg 147  Q
    ||||||||||||||  ||||  |||||||||||||| |||||||||||||| ||          |||||| || ||||| ||||||||| ||||||||||    
T  10283 agaatgaatttttgtgagttacacctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttgtt-aggttaaatg 10381  T
Q  148 cgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatc 247  Q
    |||||||||| |||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| ||||| ||||||| || |    ||| |      
T  10382 cgatctttgttgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaat 10481  T
Q  248 taatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    | || |||||   |||||||||||||||||||||||||||||||||    
T  10482 tgatgttgtttataatgttatataattgtatatacattacatgaat 10527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 7744 - 8044
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| ||||||||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  7744 atgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatgaatttttgggggttacacctgaactcgccatagcgagt 7843  T
Q  101 agaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          ||  |  ||  || |||||||||  |||||||||||||||||||||||||  | ||||||  |||||||||| |||||      
T  7844 agaggctctcgcctcgcgagttaccttgttccagaatgccttg-ctaggttaaatgcgatctttgtcgcaagaattgatgtgagttgatcttagaggtat 7942  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    ||||||||||| |||||||||||| | ||||| |||| || || |  | ||| || | || |||||   ||||| |||||||| |||||||||||| |||    
T  7943 gaaactaagttgtttatcttgctgatgttgttccagtgagactgatgtatatgatttgatgttgtttataatgtgatataattttatatacattacttga 8042  T
Q  292 at 293  Q
    ||    
T  8043 at 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 32517 - 32288
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    || |||||||| |||||  |  |||||||||||||||||| |||||     
T  32517 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcgagc 32418  T
Q  101 agaggctatc---------tttgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta 191  Q
    ||||||| ||          |  |   || ||||||||||||||||||||||||||||||||||||||||          |||||||||||| |||||||    
T  32417 agaggctctcacctcgcgagtacttgtgttacataatgccttgtttaggttaaatgcgatctttgtcgca----------ctagttgatcttagaggtta 32328  T
Q  192 gaaactaagttatttatcttgctgttattgtttcagtaag 231  Q
    ||||||||||| |||||||| ||||| ||||| |||||||    
T  32327 gaaactaagttgtttatcttactgttgttgttccagtaag 32288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 126 - 293
Target Start/End: Complemental strand, 1383 - 1217
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    ||||||||||| ||||||||||||||||||||| ||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||| ||||| |    
T  1383 aatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatcttagaggtaagaaactaagttttttatcttgttgttgttgttcc 1285  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||||| || |  | ||| || | || ||||||  ||||||||||| ||||||||||||| |||||||    
T  1284 agtaagactgatgtatatgatttgatgttgttgttaatgttatatagttgtatatacattccatgaat 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43471 - 43577
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||| ||||  ||||| |||||||||  |||||    
T  43471 atgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgtactcgccatgacgagt 43570  T
Q  101 agaggct 107  Q
    |||||||    
T  43571 agaggct 43577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47391 - 47497
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||| ||||  ||||| ||| |||||  |||||    
T  47391 atgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgtactagccatgacgagt 47490  T
Q  101 agaggct 107  Q
    |||||||    
T  47491 agaggct 47497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 298 - 141
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||||| ||||||  |||||||| ||| ||| ||||||||||||   |||||| ||||| |||||||||||||||||    
T  298 ttaggttaaatgtgacctttgtcgcacaagttgatgtgagttgatcatgggggtaagaaactaagttgcatatcttactgttgttgtttcagtaagccta 199  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    ||||  || || | || |||||   |||||||||||| ||||||| ||||||||||||    
T  198 aattaaatgatttgatgttgttaataatgttatataaatgtatatgcattacatgaat 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 287
Target Start/End: Complemental strand, 12860 - 12709
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | | ||||  |||||||||| ||||| | |||||||||| |||||||||||||| ||||||||||||| |||    
T  12860 ttaggttaaatgtgacctttgtcgcacgagtggatgtgagttgatcttagaggtaataaactaagttgtttatcttgctgttgttgtttcagtaagtcta 12761  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattac 287  Q
    |  ||||| || | || |||||   ||||| |||||||||||||||||||||    
T  12760 atgtgtattatttgatgttgtttataatgtgatataattgtatatacattac 12709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 227926 - 227851
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagtt 76  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  227926 atgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagtt 227851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 2122 - 2207
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatctt 211  Q
    ||||||||||||||||||||||||||| ||||||||| | | ||||  |||| ||||| |||||||||||||||||| ||||||||    
T  2122 aatgccttgtttaggttaaatgcgatccttgtcgcacgagtggatgtgagttaatcttagaggttagaaactaagttgtttatctt 2207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1988 - 2030
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaac 43  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  1988 atgtctaataatgattaggaaagattggagaatgagattgaac 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 6111 - 6268
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  || ||||| ||| ||| ||||||||||||  ||||||  ||||| ||||||||||||||||     
T  6111 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatctcactgttgttgtttcagtaagcctg 6210  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  6211 aattatatgatttgatgttgttattaatgtgatataaatgtatatgcattacatgaat 6268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12429 - 12329
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| |||||| | ||||  | ||||| | ||||||||||||    
T  12429 atgtataataatgattaggaaagattttagattgagattgaacctggaatag-ttaagaatggattttttggagttacaactgaatttgccatagcgagt 12331  T
Q  101 ag 102  Q
    ||    
T  12330 ag 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 291
Target Start/End: Complemental strand, 15959 - 15795
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||  ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| || | |    
T  15959 aatgcctt-tttaggtggaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgatcc 15861  T
Q  226 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||||| || | |  ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  15860 agtaagactgattcttatgaaataatgttgcttataatgttatataattgtatatacattacatga 15795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16092 - 16047
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  16092 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 18163 - 18196
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcg 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  18163 aatgccttgtttaggttaaatgcaatctttgtcg 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 293
Target Start/End: Original strand, 22509 - 22656
Alignment:
Q  142 taaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgt 241  Q
    ||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||| ||||| ||||  |||| ||||||| || |  ||     
T  22509 taaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttgtcttgatgttgctgttccagtaagactga--tgc 22606  T
Q  242 ataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||   | || |||||   |||||||||||||||||||||||||||||||||    
T  22607 ata--ttgatgttgtttataatgttatataattgtatatacattacatgaat 22656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 80152 - 80188
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||||||||||||||||||||||||||||| |||||||    
T  80152 aatgccttgtttaggttaaatgcgatcttcgtcgcac 80188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 80019 - 80067
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  80019 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 80067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 293
Target Start/End: Complemental strand, 78614 - 78457
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||  | ||||||  |||||||| ||| ||| || |||||||||  ||||||| ||||| ||||||||||||||||     
T  78614 ttaggttaaatgtgacctttgtcgcatgagttgatgtgagttgatcatgggggtaagcaactaagttgcttatcttactgttgttgtttcagtaagcctg 78515  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 293  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  78514 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 78457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 80772 - 80702
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||||    
T  80772 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 80702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 128581 - 128651
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| |  |||||||||||||||||||||| ||||||  |||| ||||||||    
T  128581 atgtataataatgattaggcaagttatgagattgagattgaacctggaaaagtttataaatggatttttgg 128651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 128837 - 128955
Alignment:
Q  174 agttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataat 273  Q
    |||||||| ||| ||| ||||||||||||  ||||||| ||||| |||||||||||||||| | ||  || || | || |||||   ||||| ||||| |    
T  128837 agttgatcatgg-ggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctgatttagatgatttgatgttgttaataatgtgatatatt 128935  T
Q  274 tgtatatacattacatgaat 293  Q
    ||||||| ||||||||||||    
T  128936 tgtatatccattacatgaat 128955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 47; Significance: 9e-18; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 32646 - 32752
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||| || |||||| |||||||||||||| ||   ||| ||||||||||||||  ||||| |||  ||||||||| ||||||     
T  32646 atgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgagg 32745  T
Q  101 agaggct 107  Q
    |||||||    
T  32746 agaggct 32752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 46359 - 46253
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    ||||||||||||||||||||| || |||||| |||||||||||||| ||   ||| ||||||||||||||  ||||| |||  ||||||||| ||||||     
T  46359 atgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgagg 46260  T
Q  101 agaggct 107  Q
    |||||||    
T  46259 agaggct 46253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16521 - 16473
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||   ||||||||||||||||    
T  16521 atgtctaataatgattaggaaagaatgtaggacgagattgaacctggaa 16473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 9508 - 9404
Alignment:
Q  3 gtctaataatgattaggaaagattggagattgagattgaacctggaat-agtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagta 101  Q
    ||||||||| |||||||||||| || ||| |||||||| ||||||||  |||||| |||||||||||||  |  |||||||||||||||||| |||||||    
T  9508 gtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagta 9410  T
Q  102 gaggct 107  Q
    ||||||    
T  9409 gaggct 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12362 - 12257
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||||||||||||| || ||| |||||||||||||||| ||  ||||||||||| ||||||| |  || ||||||||||||||| |||||    
T  12362 atgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-attaagaatgaactttttggaaactg-acctgaactcgccatggcgag 12265  T
Q  100 tagaggct 107  Q
    ||||||||    
T  12264 tagaggct 12257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20113 - 20218
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||| ||||||||| ||||||||| || ||| |||||||||||||||| ||  ||||||||||| ||||||| || || ||||||||||||||| |||||    
T  20113 atgtttaataatgagtaggaaagaatgtagaatgagattgaacctggatta-attaagaatgaactttttggaagctg-acctgaactcgccatggcgag 20210  T
Q  100 tagaggct 107  Q
    ||||||||    
T  20211 tagaggct 20218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 34425 - 34317
Alignment:
Q  122 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 221  Q
    ||||||| |||| |||||||| |||||||||||||| |  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |     
T  34425 acataattcctt-tttaggttgaatgcgatctttgttgttctagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatt 34327  T
Q  222 tttcagtaag 231  Q
    || |||||||    
T  34326 ttccagtaag 34317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34554 - 34509
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  34554 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 34509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 291
Target Start/End: Original strand, 19713 - 19868
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || |||||||||||   |||||   |||||||||||| ||| ||||||||||||  ||||||| ||||| ||||| |||||||| |     
T  19713 ttaggttaaatgtgacctttgtcgcacgggttgatatgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttccagtaagcatg 19812  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 291  Q
    |||| ||| || | || || ||   ||||| |||||| ||||||| ||||||||||    
T  19813 aattatatgatttgatgttattaataatgtgatataaatgtatatgcattacatga 19868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1764 - 1870
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||   ||| ||||||||  ||||| | |   ||||||| ||||||| |||||     
T  1764 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttggaaatctgacctgaattcgccatggcgagc 1863  T
Q  101 agaggct 107  Q
    |||||||    
T  1864 agaggct 1870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13641 - 13571
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | |||||||||||| ||||||||    
T  13641 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaagaatggatttttgg 13571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 3198 - 3134
Alignment:
Q  7 aataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    ||||||||||||| ||| ||  ||||||||||||||| ||| | ||||||| |||| ||||||||    
T  3198 aataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttgg 3134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 2265 - 2369
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 225  Q
    |||||||| |||||||| ||||||||||||| ||  | | || |||  |||||||||| |||||||||||||||||| |||| |||||| ||| |||| |    
T  2265 aatgcctt-tttaggttgaatgcgatctttgccgttcgagtttatgtgagttgatcttagaggttagaaactaagttttttaccttgctattaatgttcc 2363  T
Q  226 agtaag 231  Q
    ||||||    
T  2364 agtaag 2369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2132 - 2177
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  2132 atgtctaataatgattaggaaagaatgtagaatgagattgaacctg 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 293
Target Start/End: Original strand, 53393 - 53534
Alignment:
Q  152 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 251  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||  ||||  |||| ||||||| || |  | ||| || | ||    
T  53393 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgat 53492  T
Q  252 attgttgcgaatgttatataattgtatatacattacatgaat 293  Q
     |||||   ||||| ||||||||||||||||||||| |||||    
T  53493 gttgtttataatgtgatataattgtatatacattacttgaat 53534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 8114 - 8150
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  8114 aatgccttgtttaggttaaatgcgatctttgtcgcac 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7981 - 8029
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  7981 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 8029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 11591 - 11494
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 223  Q
    |||||| | |||||||| ||||||||||||||||  | | ||||||  |||| ||||| |||||||||||||||||| |||| |||| ||||| ||||    
T  11591 aatgccctttttaggttgaatgcgatctttgtcgttcgagttgatgtgagttaatcttagaggttagaaactaagttgtttaccttggtgttaatgtt 11494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 2161 - 2131
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  2161 aatgttatataattgtatatacattacatga 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 329 - 293
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  329 aatgccttgtttaggttaaatgcgatctttgtcgcac 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 462 - 414
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  462 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39193 - 39145
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  39193 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 39145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 32978 - 32942
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatgatgt 340  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  32978 tgcatgagtcggtctaacttgatgaagatgatgatgt 32942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 38607 - 38507
Alignment:
Q  139 ggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaat 238  Q
    ||||||||| || |||| |||||| | ||||||  ||||||||  || ||| ||||||||||||  ||||||| ||||| |||||||||||||||| |||    
T  38607 ggttaaatgagacctttatcgcacgagttgatgtgagttgatcacgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctgaat 38508  T
Q  239 t 239  Q
    |    
T  38507 t 38507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38807 - 38751
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaa 57  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | |||||||    
T  38807 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 38751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 24212 - 24268
Alignment:
Q  6 taataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatg 62  Q
    |||||||||||||| ||| ||  ||||||||||||||||||||||||||||| ||||    
T  24212 taataatgattaggcaagcttttagattgagattgaacctggaatagtttaaaaatg 24268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16902 - 16950
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||    
T  16902 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40290 - 40242
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||    
T  40290 atgtctaataatgattaggaaagaatggaggatgagattgaacctggaa 40242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39618 - 39666
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    ||||||| |||||||||||||||| || ||| |||||||||||||||||    
T  39618 atgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 39666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 59190 - 59235
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctg 46  Q
    |||||||||||||||||||| ||| || ||| ||||||||||||||    
T  59190 atgtctaataatgattaggacagaatgtagaatgagattgaacctg 59235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26659 - 26611
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  ||||||| |||||||||    
T  26659 atgtctaataatgattaggaaagaatgtaggatgagattaaacctggaa 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 841 - 739
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| |   ||| |||||||||||| |||||||  ||||| ||||||||||||||||     
T  841 ttaggttaaatgagacctttgtcgcacgagttgatgtgagttgatcatat-ggtaagaaactaagttgtttatctaactgttgttgtttcagtaagcctg 743  T
Q  236 aatt 239  Q
    ||||    
T  742 aatt 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 338 - 232
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagtt-gaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||| || || ||||||||  |||   ||||   |||||||||||||| ||||||    
T  338 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-agatttagaatgaaactttttgagttctgacctgaactcgccacagcgag 240  T
Q  100 tagaggct 107  Q
    ||||||||    
T  239 tagaggct 232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4942 - 4835
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||| ||||| || ||| ||||||||||||||| || | ||| ||||||||  ||||| | |   ||||||||||||||| |||||    
T  4942 atgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgag 4843  T
Q  100 tagaggct 107  Q
     |||||||    
T  4842 cagaggct 4835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12524 - 12417
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||| ||||| || ||| ||||||||||||||| || | ||| ||||||||  ||||| | |   ||||||||||||||| |||||    
T  12524 atgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgag 12425  T
Q  100 tagaggct 107  Q
     |||||||    
T  12424 cagaggct 12417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22476 - 22369
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||| ||||| || ||| ||||||||||||||| || | ||| ||||||||  ||||| | |   ||||||||||||||| |||||    
T  22476 atgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgag 22377  T
Q  100 tagaggct 107  Q
     |||||||    
T  22376 cagaggct 22369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5808 - 5854
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg 47  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||    
T  5808 atgtctaataatgattaggaaagattgtaggatgagattgaacctgg 5854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 649 - 695
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg 47  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||    
T  649 atgtctaataatgattaggaaagattgtagaacgagattgaacctgg 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28970 - 28924
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgg 47  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||    
T  28970 atgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25616 - 25546
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||| ||||| ||||||| |||| ||||||||    
T  25616 atgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtttaaaaatggatttttgg 25546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25752 - 25858
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagt 100  Q
    |||||||||||||||||||||||| || ||  |||||||||||||| ||   ||  ||||||||||||||| | |   ||||||||||||||  |||||     
T  25752 atgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaatttttggaaatctgacctgaactcgccacggcgagc 25851  T
Q  101 agaggct 107  Q
    |||||||    
T  25852 agaggct 25858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33181 - 33229
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  33181 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 33229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15163 - 15213
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaata 51  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||||    
T  15163 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaata 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2285 - 2175
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatg-aatttttggtagttgaacctgaactcgccatagcgag 99  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||   ||  |||||| || || ||| | |   ||||||||||||||| |||||    
T  2285 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgag 2186  T
Q  100 tagaggctatc 110  Q
    |||||||||||    
T  2185 tagaggctatc 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 207339 - 207375
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    ||||| |||||||||||||||||||||||||||||||    
T  207339 aatgctttgtttaggttaaatgcgatctttgtcgcac 207375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 289
Target Start/End: Original strand, 1626 - 1779
Alignment:
Q  136 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 235  Q
    |||||||| ||| || ||||||||||| | ||||||  |||||||||||  ||| ||||||||||||   |||||| || || ||||| ||||||||||     
T  1626 ttaggttacatgtgacctttgtcgcacgagttgatgtgagttgatcttgagggtaagaaactaagttgcctatcttactattgttgttccagtaagcctg 1725  T
Q  236 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacat 289  Q
    |||| ||| || | |  |||||   ||||| |||||| ||||||| ||||||||    
T  1726 aattatatgatttgacgttgttaataatgtgatataaatgtatatgcattacat 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4829 - 4878
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  4829 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7164 - 7095
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttg 70  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| |||||||    
T  7164 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttg 7095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 750 - 799
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  750 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10124 - 10173
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  10124 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5271 - 5222
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  5271 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 5222  T

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Target: scaffold0292 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3904 - 3855
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  3904 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 3855  T

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Target: scaffold0292; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 776 - 732
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacct 45  Q
    |||||||||||||||||| ||||| || ||| |||||||||||||    
T  776 atgtctaataatgattagaaaagaatgtagaatgagattgaacct 732  T

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Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11211 - 11260
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  11211 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 11260  T

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Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 10211 - 10178
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcg 159  Q
    ||||||||||||||||||||||||||||||||||    
T  10211 aatgccttgtttaggttaaatgcgatctttgtcg 10178  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 97297 - 97201
Alignment:
Q  137 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    |||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  || |||| ||||| ||||||||||||||||    
T  97297 taggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcct 97201  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 106575 - 106479
Alignment:
Q  137 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 234  Q
    |||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  || |||| ||||| ||||||||||||||||    
T  106575 taggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcct 106479  T

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Target: scaffold0876 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2772 - 2820
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  2772 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 2820  T

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Target: scaffold0305 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20837 - 20789
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  20837 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 20789  T

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Target: scaffold0266 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18645 - 18693
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  18645 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18693  T

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Target: scaffold0217 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16286 - 16334
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| |  ||| |||||||||||||||||    
T  16286 atgtctaataatgattaggaaagaatttagaatgagattgaacctggaa 16334  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 9654 - 9690
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgcac 162  Q
    |||||||||||||||||||||| ||||||||||||||    
T  9654 aatgccttgtttaggttaaatgtgatctttgtcgcac 9690  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8219 - 8267
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  8219 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 8267  T

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Target: scaffold0100 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20546 - 20498
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||| | |||||||||||||||    
T  20546 atgtctaataatgattaggaaagaatgtagaataagattgaacctggaa 20498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52346 - 52298
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||    
T  52346 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 52298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 268162 - 268094
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaattttt 69  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| | ||||||| |||| ||||||    
T  268162 atgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggattttt 268094  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17695 - 17742
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga 48  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||    
T  17695 atgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 17742  T

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Target: scaffold0142 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17214 - 17167
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctgga 48  Q
    |||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  17214 atgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 17167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6515 - 6557
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaac 43  Q
    |||||||||||||||||||||||| || ||| |||||||||||    
T  6515 atgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Original strand, 1026 - 1056
Alignment:
Q  261 aatgttatataattgtatatacattacatga 291  Q
    |||||||||||||||||||||||||||||||    
T  1026 aatgttatataattgtatatacattacatga 1056  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27329 - 27399
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaatgaatttttgg 71  Q
    |||| |||||||||||||| ||| ||  || |||||||||||||||| | | |||||||||| ||||||||    
T  27329 atgtataataatgattaggcaagtttttagtttgagattgaacctgggaaattttaagaatggatttttgg 27399  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 26889 - 26855
Alignment:
Q  126 aatgccttgtttaggttaaatgcgatctttgtcgc 160  Q
    |||||||||||||||||||||| ||||||||||||    
T  26889 aatgccttgtttaggttaaatgtgatctttgtcgc 26855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 139 - 106
Alignment:
Q  304 tgcataagtcggtctaacttgattaagatgatga 337  Q
    ||||||||||||||||| ||||||||||||||||    
T  139 tgcataagtcggtctaagttgattaagatgatga 106  T

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Target: scaffold0540 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 700 - 741
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaa 42  Q
    |||||||||||||||||||||||| || ||| ||||||||||    
T  700 atgtctaataatgattaggaaagaatgtagaatgagattgaa 741  T

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Target: scaffold0484 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 1333 - 1288
Alignment:
Q  5 ctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||| || ||  ||||||||||||||||||    
T  1333 ctaataatgattaggaaagaatgtaggatgagattgaacctggaat 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13918 - 13869
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||  || ||  ||||||||||||||||||    
T  13918 atgtctaataatgattaggaaaggatgtagcatgagattgaacctggaat 13869  T

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Target: scaffold0358 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 359 - 310
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  |||||||||| |||||||    
T  359 atgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5135 - 5086
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  |||||||||| |||||||    
T  5135 atgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 5086  T

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Target: scaffold0193 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13634 - 13585
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    |||||||||||||||||||||||| || ||  ||||| ||||||||||||    
T  13634 atgtctaataatgattaggaaagaatgtaggatgagactgaacctggaat 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47409 - 47360
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaat 50  Q
    ||||||||||||||||||||| || || ||  ||||||||||||||||||    
T  47409 atgtctaataatgattaggaatgaatgtaggatgagattgaacctggaat 47360  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12496 - 12544
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||| ||||||||||||| || ||  |||||||||||||||||    
T  12496 atgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 12544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23989 - 24037
Alignment:
Q  1 atgtctaataatgattaggaaagattggagattgagattgaacctggaa 49  Q
    |||||||||||||||||||||| | || ||  |||||||||||||||||    
T  23989 atgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 24037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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