View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16306_low_12 (Length: 324)
Name: NF16306_low_12
Description: NF16306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16306_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 53 - 313
Target Start/End: Original strand, 33090504 - 33090764
Alignment:
| Q |
53 |
atgtggtctcattaactgataatatcctaattattcattcttgtttaaattttctatctgtgtattacttcttaatcaagattaattttgaggatgttat |
152 |
Q |
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| T |
33090504 |
atgtggtctcattaactgataatatcctaattattcattcttgtttaaattttctatctttgtattacttcttaatcaagattaattttgaggatgttat |
33090603 |
T |
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| Q |
153 |
gttagaacaaagtgtctgtctcatgtgccaacatatttgatatatcacctacctttcttcattaagctaaagttttatgttttccaaattttctattatc |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
33090604 |
gttagaacaaagtgtctgtctcatgtgccaacatatttgatatatcacctacctttcttcattaagctagagttttatgttttccaaattttctattatc |
33090703 |
T |
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| Q |
253 |
atatttcatgatagatgcttttcccaacactattgtggcctatgctaatgtcttgtttcat |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33090704 |
atatttcatgatagatgcttttcccaacactattgtggcctatgctaatgtcttgtttcat |
33090764 |
T |
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