View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16306_low_14 (Length: 281)

Name: NF16306_low_14
Description: NF16306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16306_low_14
NF16306_low_14
[»] chr3 (22 HSPs)
chr3 (9-271)||(12033375-12033636)
chr3 (9-271)||(17131595-17131857)
chr3 (11-271)||(14865711-14865971)
chr3 (11-270)||(19235002-19235257)
chr3 (146-271)||(23370435-23370560)
chr3 (129-271)||(51301572-51301715)
chr3 (127-258)||(13302185-13302314)
chr3 (140-258)||(13323732-13323848)
chr3 (142-216)||(10389428-10389502)
chr3 (142-216)||(10414517-10414591)
chr3 (142-216)||(10421187-10421261)
chr3 (127-258)||(13312841-13312970)
chr3 (149-206)||(24933823-24933880)
chr3 (188-271)||(10555353-10555434)
chr3 (146-200)||(9534328-9534382)
chr3 (127-200)||(17240513-17240587)
chr3 (146-200)||(18929246-18929300)
chr3 (146-198)||(20247791-20247843)
chr3 (146-198)||(24192957-24193009)
chr3 (149-201)||(41455097-41455149)
chr3 (146-201)||(16801467-16801521)
chr3 (146-200)||(14762758-14762812)
[»] chr1 (10 HSPs)
chr1 (10-271)||(20851062-20851323)
chr1 (10-271)||(20857689-20857950)
chr1 (10-271)||(21706140-21706401)
chr1 (9-271)||(21710682-21710943)
chr1 (148-206)||(20044946-20045004)
chr1 (127-200)||(18712780-18712854)
chr1 (146-200)||(20437024-20437078)
chr1 (146-200)||(32651573-32651627)
chr1 (149-201)||(41112038-41112090)
chr1 (146-200)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (10-271)||(24320600-24320861)
chr8 (20-200)||(29643386-29643567)
chr8 (146-271)||(44477623-44477749)
chr8 (146-271)||(44492781-44492907)
chr8 (127-200)||(18614253-18614327)
chr8 (127-200)||(23482053-23482127)
chr8 (146-198)||(8727735-8727787)
chr8 (149-201)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (9-271)||(20906391-20906652)
chr7 (11-271)||(16090940-16091201)
chr7 (11-271)||(29181038-29181299)
chr7 (101-271)||(2971209-2971379)
chr7 (142-271)||(14319559-14319688)
chr7 (142-271)||(14230777-14230906)
chr7 (9-107)||(2966828-2966926)
chr7 (29-261)||(2465246-2465474)
chr7 (29-261)||(3857308-3857536)
chr7 (146-271)||(14567204-14567329)
chr7 (148-216)||(31155396-31155464)
chr7 (146-200)||(11382871-11382925)
chr7 (146-200)||(11389348-11389402)
chr7 (146-208)||(21230952-21231014)
chr7 (146-201)||(14422985-14423040)
chr7 (146-200)||(16009577-16009631)
chr7 (149-201)||(12590643-12590695)
chr7 (149-201)||(13007435-13007487)
chr7 (146-202)||(20311050-20311106)
chr7 (146-200)||(13679494-13679548)
chr7 (146-200)||(15168176-15168230)
chr7 (149-201)||(12709843-12709895)
chr7 (149-201)||(13122914-13122966)
chr7 (149-201)||(13743712-13743764)
chr7 (146-198)||(16677296-16677348)
chr7 (146-198)||(17651532-17651584)
[»] chr5 (21 HSPs)
chr5 (10-271)||(19236765-19237025)
chr5 (10-271)||(22461020-22461281)
chr5 (10-271)||(22467644-22467905)
chr5 (9-270)||(20772834-20773090)
chr5 (9-270)||(20781609-20781865)
chr5 (20-270)||(24929862-24930108)
chr5 (22-271)||(28909220-28909467)
chr5 (22-271)||(28945615-28945862)
chr5 (22-271)||(28895972-28896219)
chr5 (22-271)||(28924798-28925045)
chr5 (22-271)||(28889268-28889515)
chr5 (32-209)||(20820105-20820279)
chr5 (32-209)||(20827205-20827379)
chr5 (21-208)||(34829960-34830146)
chr5 (127-200)||(18407944-18408018)
chr5 (146-266)||(38144472-38144591)
chr5 (127-200)||(23111200-23111274)
chr5 (146-202)||(22438746-22438802)
chr5 (146-200)||(19512387-19512441)
chr5 (146-200)||(28370055-28370109)
chr5 (149-201)||(23528634-23528686)
[»] scaffold0053 (1 HSPs)
scaffold0053 (11-271)||(79419-79680)
[»] chr6 (27 HSPs)
chr6 (10-271)||(20007877-20008138)
chr6 (11-270)||(9099005-9099260)
chr6 (29-261)||(21364423-21364650)
chr6 (29-261)||(23968405-23968632)
chr6 (142-271)||(31252419-31252549)
chr6 (148-271)||(11288601-11288721)
chr6 (148-216)||(15458492-15458560)
chr6 (148-216)||(15465087-15465155)
chr6 (146-271)||(34639915-34640041)
chr6 (146-271)||(34646589-34646715)
chr6 (146-208)||(10986173-10986235)
chr6 (173-271)||(28288442-28288537)
chr6 (183-271)||(24563475-24563564)
chr6 (146-201)||(29614146-29614201)
chr6 (146-200)||(4477858-4477912)
chr6 (146-200)||(23839199-23839253)
chr6 (146-208)||(24512836-24512898)
chr6 (149-201)||(12168366-12168418)
chr6 (149-201)||(19287275-19287327)
chr6 (149-201)||(19785869-19785921)
chr6 (149-201)||(19878459-19878511)
chr6 (239-271)||(24641612-24641644)
chr6 (146-201)||(930095-930150)
chr6 (146-201)||(18800438-18800493)
chr6 (20-69)||(29097741-29097789)
chr6 (148-200)||(9187498-9187550)
chr6 (149-201)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (11-271)||(135304-135563)
[»] chr2 (17 HSPs)
chr2 (9-250)||(25180880-25181121)
chr2 (10-248)||(10441-10679)
chr2 (142-271)||(27207649-27207778)
chr2 (142-271)||(26885179-26885307)
chr2 (148-271)||(23168229-23168351)
chr2 (148-271)||(23579486-23579608)
chr2 (127-200)||(23265123-23265197)
chr2 (127-200)||(23280191-23280265)
chr2 (183-271)||(27366477-27366566)
chr2 (149-216)||(5706008-5706075)
chr2 (146-200)||(6483718-6483772)
chr2 (146-200)||(6487185-6487239)
chr2 (146-200)||(21908360-21908414)
chr2 (20-90)||(23168413-23168483)
chr2 (20-90)||(23579670-23579740)
chr2 (149-201)||(26583830-26583882)
chr2 (239-271)||(5705952-5705984)
[»] scaffold0072 (1 HSPs)
scaffold0072 (11-271)||(49899-50161)
[»] chr4 (7 HSPs)
chr4 (11-239)||(16146791-16147020)
chr4 (20-208)||(27906139-27906328)
chr4 (111-198)||(14486624-14486713)
chr4 (149-271)||(53483708-53483831)
chr4 (146-202)||(15408140-15408196)
chr4 (146-201)||(11848114-11848169)
chr4 (149-201)||(8045832-8045884)
[»] scaffold1318 (1 HSPs)
scaffold1318 (46-271)||(1842-2067)
[»] scaffold0348 (1 HSPs)
scaffold0348 (11-206)||(9201-9396)
[»] scaffold0131 (1 HSPs)
scaffold0131 (52-271)||(904-1121)
[»] scaffold0127 (1 HSPs)
scaffold0127 (129-271)||(10222-10364)
[»] scaffold0001 (1 HSPs)
scaffold0001 (142-271)||(492958-493086)
[»] scaffold0553 (2 HSPs)
scaffold0553 (146-271)||(10125-10250)
scaffold0553 (173-205)||(11079-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (146-271)||(1455-1580)
[»] scaffold1469 (1 HSPs)
scaffold1469 (22-216)||(1233-1425)
[»] scaffold0384 (1 HSPs)
scaffold0384 (20-206)||(16059-16243)
[»] scaffold0029 (3 HSPs)
scaffold0029 (29-261)||(91144-91374)
scaffold0029 (29-261)||(96870-97100)
scaffold0029 (148-201)||(111885-111938)
[»] scaffold0609 (1 HSPs)
scaffold0609 (22-271)||(5786-6036)
[»] scaffold0720 (1 HSPs)
scaffold0720 (142-271)||(3332-3461)
[»] scaffold0183 (1 HSPs)
scaffold0183 (148-270)||(6-125)
[»] scaffold0249 (1 HSPs)
scaffold0249 (148-216)||(13879-13947)
[»] scaffold0261 (1 HSPs)
scaffold0261 (20-208)||(23562-23751)
[»] scaffold0026 (2 HSPs)
scaffold0026 (146-271)||(111686-111812)
scaffold0026 (146-201)||(11850-11905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (142-205)||(10546-10609)
[»] scaffold0034 (2 HSPs)
scaffold0034 (142-208)||(73281-73347)
scaffold0034 (20-90)||(73158-73228)
[»] scaffold2054 (1 HSPs)
scaffold2054 (148-201)||(717-770)
[»] scaffold0107 (1 HSPs)
scaffold0107 (20-208)||(40524-40714)
[»] scaffold0222 (1 HSPs)
scaffold0222 (127-200)||(16801-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-202)||(135346-135530)
[»] scaffold0004 (1 HSPs)
scaffold0004 (127-200)||(116877-116951)
[»] scaffold0099 (1 HSPs)
scaffold0099 (20-199)||(12830-13019)
[»] scaffold0924 (1 HSPs)
scaffold0924 (146-201)||(750-805)
[»] scaffold0247 (1 HSPs)
scaffold0247 (146-201)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (146-201)||(30858-30913)
[»] scaffold0129 (2 HSPs)
scaffold0129 (149-216)||(45259-45326)
scaffold0129 (239-271)||(45203-45235)
[»] scaffold0461 (1 HSPs)
scaffold0461 (127-200)||(8-82)
[»] scaffold0146 (1 HSPs)
scaffold0146 (127-200)||(13613-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (127-200)||(101928-102002)
[»] scaffold0235 (1 HSPs)
scaffold0235 (147-208)||(22585-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (146-202)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (146-198)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (146-201)||(932-987)
scaffold0456 (146-201)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (146-201)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (142-200)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (146-200)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (146-200)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (149-210)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (148-201)||(1897-1950)
scaffold0117 (148-201)||(8574-8627)
[»] scaffold0796 (2 HSPs)
scaffold0796 (149-201)||(1732-1784)
scaffold0796 (149-201)||(5755-5807)
[»] scaffold0058 (1 HSPs)
scaffold0058 (149-201)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (149-201)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 9 - 271
Target Start/End: Complemental strand, 12033636 - 12033375
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctta 108  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  12033636 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaaccctta 12033537  T
Q  109 atttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033536 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 12033437  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12033436 aagacaaa-agcacatcaaatcagttcctaagttcttctctcttggtcttctctccttacctt 12033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 9 - 271
Target Start/End: Original strand, 17131595 - 17131857
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctta 108  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||| |    
T  17131595 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaa 17131694  T
Q  109 atttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131695 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 17131794  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  17131795 aagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 17131857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 11 - 271
Target Start/End: Original strand, 14865711 - 14865971
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| ||| |    
T  14865711 atcaacaacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattatt 14865810  T
Q  111 ttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 210  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865811 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 14865910  T
Q  211 gacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  14865911 gacaaatagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 14865971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 270
Target Start/End: Complemental strand, 19235257 - 19235002
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| ||| |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| || ||||||| ||  | ||||||||||||| |||    
T  19235257 atcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaat 19235160  T
Q  111 ttcccaattttaccctaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19235159 ttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaa 19235060  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcct 270  Q
    ||| |||  ||  | ||||||| |||||||| |||||||||||||||||||| ||||||||    
T  19235059 agataaagtgc--agcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 19235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 23370560 - 23370435
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttctt 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||| |||| | |||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  246 ctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||||    
T  23370460 ctctcttggtcttctctccttgcctt 23370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 51301572 - 51301715
Alignment:
Q  129 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaa 227  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||| |  | | |  |    
T  51301572 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaaagaaaacacagca 51301671  T
Q  228 atcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||  |||   |||||||||||||||||||||||||||||||||    
T  51301672 atcgattctctagttcttctctcttggtcttctctccttgcctt 51301715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 258
Target Start/End: Complemental strand, 13302314 - 13302185
Alignment:
Q  127 aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataaca 226  Q
    ||||||| | || ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||| ||| | || | ||    
T  13302314 aagaacaatgcatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagca 13302217  T
Q  227 aatcagttcctaagttcttctctcttggtctt 258  Q
    |||||||||||| |||| |||| |||| ||||    
T  13302216 aatcagttcctaggttcatctcccttgttctt 13302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 13323848 - 13323732
Alignment:
Q  140 ttgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaa 239  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| | | | ||| | |  | ||||||||||||||     
T  13323848 ttgattaattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaaaaatc--agcaaatcagttcctag 13323751  T
Q  240 gttcttctctcttggtctt 258  Q
    ||||||||| |||| ||||    
T  13323750 gttcttctcccttgttctt 13323732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 10389502 - 10389428
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||||| ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10389428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 10414591 - 10414517
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||||| ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 10421261 - 10421187
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||||| ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 258
Target Start/End: Complemental strand, 13312970 - 13312841
Alignment:
Q  127 aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataaca 226  Q
    ||||||| | || |||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||| ||| | || | ||    
T  13312970 aagaacaatccatttgattaattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagca 13312873  T
Q  227 aatcagttcctaagttcttctctcttggtctt 258  Q
    |||||||||||| |||| |||| |||| ||||    
T  13312872 aatcagttcctaggttcatctcccttgttctt 13312841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 24933880 - 24933823
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 206  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 24933823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 10555353 - 10555434
Alignment:
Q  188 cacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||| ||| ||||| || |  |||||||| | |||||| |||||||||||||||||||| |||||||||    
T  10555353 cacccttaccttagaattgtaaacacaaa-agtacgacaaatcaatccctaagctcttctctcttggtcttctc-ccttgcctt 10555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 17240587 - 17240513
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  17240587 aagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 198  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 198  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 20851323 - 20851062
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| | |||| |||||||| ||    
T  20851323 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20851224  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851223 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20851124  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  20851123 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 20857950 - 20857689
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| | |||| |||||||| ||    
T  20857950 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20857851  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857850 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20857751  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  20857750 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20857689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 21706140 - 21706401
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| | |||| |||||||| ||    
T  21706140 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 21706239  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706240 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 21706339  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  21706340 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21706401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 271
Target Start/End: Original strand, 21710682 - 21710943
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctta 108  Q
    |||||| |||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||| ||||||| ||||||||||| | |||| | |||||| |    
T  21710682 acatcaacaacatagattaaggaatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaa 21710780  T
Q  109 atttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710781 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 21710880  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  21710881 aagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21710943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 20045004 - 20044946
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 206  Q
    ||||||||| |||||||||| ||  |||||| |||||||||||||||||||||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattg 20044946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 32651573 - 32651627
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651573 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 19663571 - 19663517
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663571 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 24320861 - 24320600
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||||||| | |||| |||||||| ||    
T  24320861 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaa 24320762  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320761 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 24320662  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  24320661 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 24320600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 200
Target Start/End: Complemental strand, 29643567 - 29643386
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatt 119  Q
    |||||||||||||||||||| | || |||| |||||||  || ||||  ||||||| |||  | ||| | | | |||||| ||||||||||| | |||||    
T  29643567 atagattaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaacccttaatt-ctcaatt 29643469  T
Q  120 ttaccctaa-gaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||| | | | ||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643468 ttatcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 44477623 - 44477749
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttct 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||| |  | | |  ||||  |||   ||||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagcaatcgattctctagttct 44477722  T
Q  245 tctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||    
T  44477723 tctctcttggtcttctctccttgcctt 44477749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 44492781 - 44492907
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttct 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||| |  | | |  ||||  |||   ||||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagcaatcgattctctagttct 44492880  T
Q  245 tctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||    
T  44492881 tctctcttggtcttctctccttgcctt 44492907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 18614253 - 18614327
Alignment:
Q  127 aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614253 aagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 23482127 - 23482053
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23482127 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 198  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 9 - 271
Target Start/End: Complemental strand, 20906652 - 20906391
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctta 108  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  20906652 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaaccctta 20906553  T
Q  109 atttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20906552 att-cccaattttaccttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 20906454  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    | ||||||||||  | |||||| |||||||||||||||||||||||||||||| |||||||||    
T  20906453 aggacaaatagctcagcaaatccgttcctaagttcttctctcttggtcttctccccttgcctt 20906391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 271
Target Start/End: Original strand, 16090940 - 16091201
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| |||||| ||||||||||||||||||| |||  || ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| |    
T  16090940 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16091039  T
Q  111 ttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 210  Q
    |||||||||||||| || |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16091040 ttcccaattttaccttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16091139  T
Q  211 gacaaatagcataac-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  16091140 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 16091201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 271
Target Start/End: Complemental strand, 29181299 - 29181038
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| |||||| ||||||||||||||||||| |||  || ||||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||| |    
T  29181299 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttatt 29181200  T
Q  111 ttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 210  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29181199 ttccaaattttaccttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 29181100  T
Q  211 gacaaatagcataac-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  29181099 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 29181038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 101 - 271
Target Start/End: Original strand, 2971209 - 2971379
Alignment:
Q  101 aacccttaatttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  201 gaattgcaaagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 2971379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 14319688 - 14319559
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagt 241  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  242 tcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||| ||||||||||||||||||    
T  14319588 tcttctctcttagtcttctctccttgcctt 14319559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 14230777 - 14230906
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagt 241  Q
    ||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  14230777 gattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagt 14230876  T
Q  242 tcttctctcttggtcttctctccttgcctt 271  Q
    ||| ||||||||||||||||||||||||||    
T  14230877 tctcctctcttggtcttctctccttgcctt 14230906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 2966828 - 2966926
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctt 107  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2966828 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 261
Target Start/End: Original strand, 2465246 - 2465474
Alignment:
Q  29 gaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt-acccta 127  Q
    ||||||||| ||| ||||||| || |||||||||||||| | ||||| || ||||||| ||| |    |||||||||| |||||||||||||| ||| ||    
T  2465246 gaaatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccct-aatttcccaatttttaccata 2465342  T
Q  128 agaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaa 227  Q
    | ||||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||| |||  ||  | |||    
T  2465343 aaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaagataaagtgc--agcaa 2465440  T
Q  228 atcagttcctaagttcttctctcttggtcttctc 261  Q
    | || || ||||| ||||||||||||||||||||    
T  2465441 accaatttctaagctcttctctcttggtcttctc 2465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 3857536 - 3857308
Alignment:
Q  29 gaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt---accc 125  Q
    ||||||||| ||| ||||||| ||||||||||||||||| | ||||| || ||||||| ||| |    |||||||||| ||||||||||||||   |||     
T  3857536 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccct-aatttcccaatttttttacca 3857440  T
Q  126 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataac 225  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||| |||| |||  ||  | |    
T  3857439 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc-aagataaagtgc--agc 3857344  T
Q  226 aaatcagttcctaagttcttctctcttggtcttctc 261  Q
    ||| || || ||||| ||||||||||||||||||||    
T  3857343 aaaccaatttctaagctcttctctcttggtcttctc 3857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 14567204 - 14567329
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttctt 245  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | ||||||| |||| | |||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  246 ctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||| ||||||||||||    
T  14567304 ctctcttggtcttttctccttgcctt 14567329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 31155396 - 31155464
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 31155464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 202  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 198  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 198  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 19236765 - 19237025
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| ||||||||||||||||  |||||||| | ||||||||||||| |||||||||||| ||||||||||||||||||| | |||| |||||||| ||    
T  19236765 catcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 19236863  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236864 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 19236963  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19236964 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 19237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 22461020 - 22461281
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||| | |||| |||||||| ||    
T  22461020 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaa-atcatccttaaccctaaa 22461118  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22461119 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22461218  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||  ||| | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  22461219 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 22467644 - 22467905
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||| | |||| |||||||| ||    
T  22467644 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaa-atcatccttaaccctaaa 22467742  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467743 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22467842  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||  ||| | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  22467843 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 20772834 - 20773090
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctta 108  Q
    |||||| ||| ||||| || ||||||||||||| ||||||| ||||||||||||||||||||||||| || ||||||| ||| | ||||||||||||| |    
T  20772834 acatcaacaatatagagtaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaa 20772931  T
Q  109 atttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20772932 atttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgca 20773031  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcct 270  Q
    |||| ||  || | | ||||||| |||||||| |||||||||||||||||||| ||||||||    
T  20773032 aagataa--agtacagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 20773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 20781609 - 20781865
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctta 108  Q
    |||||| ||| ||||| || ||||||||| ||| ||||||| ||||||||||||||||||||||||| || ||||||| ||| | ||||||||||||| |    
T  20781609 acatcaacaatatagagtaggaaatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaa 20781706  T
Q  109 atttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  20781707 atttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgca 20781806  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcct 270  Q
    |||| ||  || | | ||||||| |||||||| |||||||||||||||||||| ||||||||    
T  20781807 aagataa--agtacagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 20781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 270
Target Start/End: Complemental strand, 24930108 - 24929862
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatt 119  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| || ||| ||| ||  | ||||||||||||| ||||||||||||    
T  24930108 atagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaatt 24930011  T
Q  120 ttaccctaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaata 218  Q
    ||||| ||||||||||| |||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||| |||      
T  24930010 ttaccttaagaacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaagataaagt 24929911  T
Q  219 gcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcct 270  Q
    ||  | ||| ||| |||||||| |||||||||||||||||||| ||||||||    
T  24929910 gc--agcaagtcaattcctaagctcttctctcttggtcttctc-ccttgcct 24929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 271
Target Start/End: Complemental strand, 28909467 - 28909220
Alignment:
Q  22 agattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt 121  Q
    |||||| ||||||||||||| ||| ||| |||||| | |||||||||| | |||  | ||||||| ||| | |||||| || ||| | ||||||||||||    
T  28909467 agattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttt 28909370  T
Q  122 -accctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagc 220  Q
     ||| |||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  28909369 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaa-agc 28909271  T
Q  221 ataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    | | ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28909270 acagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28909220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 271
Target Start/End: Complemental strand, 28945862 - 28945615
Alignment:
Q  22 agattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt 121  Q
    |||||| ||||||||||||| ||| ||| |||||| | |||||||||| | |||  | ||||||| ||| | |||||| || ||| | ||||||||||||    
T  28945862 agattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttt 28945765  T
Q  122 -accctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagc 220  Q
     ||| |||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  28945764 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaa-agc 28945666  T
Q  221 ataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    | | ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28945665 acagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28945615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 271
Target Start/End: Complemental strand, 28896219 - 28895972
Alignment:
Q  22 agattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt 121  Q
    |||||| ||||||||||||| ||| ||| |||||| | |||||||||| | |||  | ||||||| ||| | |||||| || ||| | ||||||||||||    
T  28896219 agattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttt 28896122  T
Q  122 -accctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagc 220  Q
     ||| |||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||| |||    
T  28896121 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaa-agc 28896023  T
Q  221 ataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    | | ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28896022 acagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28895972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 271
Target Start/End: Complemental strand, 28925045 - 28924798
Alignment:
Q  22 agattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt 121  Q
    |||||| ||||||||||||| ||| ||| |||||| | |||||||||| | |||  | ||||||| ||| | |||||| || ||| | ||||||||||||    
T  28925045 agattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttt 28924948  T
Q  122 -accctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagc 220  Q
     ||| |||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||| |||    
T  28924947 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaa-agc 28924849  T
Q  221 ataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    | | ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28924848 acagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28924798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 271
Target Start/End: Complemental strand, 28889515 - 28889268
Alignment:
Q  22 agattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt 121  Q
    |||||| ||||||||||||| ||| ||| |||||| | |||||||||| | |||  | ||||||| ||| | |||||| || ||| | ||||||||||||    
T  28889515 agattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttt 28889418  T
Q  122 -accctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagc 220  Q
     ||| |||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||| |||    
T  28889417 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaa-agc 28889319  T
Q  221 ataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |   ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28889318 aatgcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28889268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 209
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  32 atcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaattttaccctaagaa 131  Q
    |||||||| | ||||||| ||||||||||||||||||| |||||| | || |||| ||| | ||||||||||||| ||||| ||||||||||| ||||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccct-aattttccaattttaccttaagaa 20820201  T
Q  132 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 209
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  32 atcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaattttaccctaagaa 131  Q
    |||||||| | ||||||| ||||||||||||||||||| |||||| | || |||| ||| | ||||||||||||| ||||| ||||||||||| ||||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccct-aattttccaattttaccttaagaa 20827301  T
Q  132 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 34829960 - 34830146
Alignment:
Q  21 tagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaattt 120  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||| ||||||||| | |||| ||||||| | || ||| |  || ||||| | ||||||    
T  34829960 tagattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaatt-ctcaattt 34830057  T
Q  121 taccct-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    || | | ||||||  ||| ||| |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830058 tatcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 18408018 - 18407944
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  18408018 aagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 38144591 - 38144472
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataaca-aatcagttcctaagttct 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||  ||   ||  || | || |||| |||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgca--gaatgattacacagcacaatcggttcctaagttct 38144494  T
Q  245 tctctcttggtcttctctcctt 266  Q
    ||||||||||||||||||||||    
T  38144493 tctctcttggtcttctctcctt 38144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 23111274 - 23111200
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23111274 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 202  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 271
Target Start/End: Complemental strand, 79680 - 79419
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| |||||| ||||||||||||||||||| |||  || ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| |    
T  79680 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 79581  T
Q  111 ttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 210  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  79580 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 79481  T
Q  211 gacaaatagcataac-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  79480 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 79419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 5e-99; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 20008138 - 20007877
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| ||| ||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| | |||| |||||||| ||    
T  20008138 catcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20008039  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20008038 tttcccaattttaccttaagaacagttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgca 20007939  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  20007938 aagacaaa-agcacagcaaatgagttcctaagttcttctctcttggtcttctctccttgcctt 20007877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 270
Target Start/End: Complemental strand, 9099260 - 9099005
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| ||| |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| || ||||||| ||  | ||||||||||||| |||    
T  9099260 atcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaat 9099163  T
Q  111 ttcccaattttaccctaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9099162 ttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaa 9099063  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcct 270  Q
    ||| |||  ||  | ||||||| |||||||| |||||||||||||||||||| ||||||||    
T  9099062 agataaagtgc--agcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 9099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 21364650 - 21364423
Alignment:
Q  29 gaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaattttaccctaa 128  Q
    ||||||||| ||| ||||||| ||||||||||||||||| | ||||| |  ||||||| ||| ||   |||||||||| ||||||||||||||||| |||    
T  21364650 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttctt-caaaaatgccattaaccct-aatttcccaattttaccataa 21364554  T
Q  129 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaa 228  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||| |||| | ||||    
T  21364553 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaa-agcacagcaaa 21364456  T
Q  229 tcagttcctaagttcttctctcttggtcttctc 261  Q
     || |||||| ||||||||||||||||||||||    
T  21364455 acaattcctaggttcttctctcttggtcttctc 21364423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 23968632 - 23968405
Alignment:
Q  29 gaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaattttaccctaa 128  Q
    ||||||||| ||| ||||||| ||||||||||||||||| | ||||| |  ||||||| ||| ||   |||||||||| ||||||||||||||||| |||    
T  23968632 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttctt-caaaaatgccattaaccct-aatttcccaattttaccataa 23968536  T
Q  129 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaa 228  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||| |||| | ||||    
T  23968535 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaa-agcacagcaaa 23968438  T
Q  229 tcagttcctaagttcttctctcttggtcttctc 261  Q
     || |||||| ||||||||||||||||||||||    
T  23968437 acaattcctaggttcttctctcttggtcttctc 23968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 31252419 - 31252549
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaag 240  Q
    ||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||| |  | | |  |||| |||||||||    
T  31252419 gattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaaaacacagcaatcggttcctaag 31252518  T
Q  241 ttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||||||    
T  31252519 ttcttctctcttggtcttctctccttgcctt 31252549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 11288721 - 11288601
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttcttct 247  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||| | || | | |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaaa-aacacagc-aatcagttcctaagctcttct 11288624  T
Q  248 ctcttggtcttctctccttgcctt 271  Q
    |||||||||||||| |||||||||    
T  11288623 ctcttggtcttctc-ccttgcctt 11288601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 15458492 - 15458560
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 15465087 - 15465155
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 34640041 - 34639915
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttct 244  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||| |  | | |  ||||  |||   ||||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagcaatcgattctctagttct 34639942  T
Q  245 tctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||    
T  34639941 tctctcttggtcttctctccttgcctt 34639915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 34646715 - 34646589
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttct 244  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||| |  | | |  ||||  |||   ||||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagcaatcgattctctagttct 34646616  T
Q  245 tctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||    
T  34646615 tctctcttggtcttctctccttgcctt 34646589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 28288537 - 28288442
Alignment:
Q  173 attgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    ||||| ||||| || ||||||||||||||||||||||||||||| | || | | |||||||||||||| | |||||||||||||||||| |||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaaa-aacacagc-aatcagttcctaagcttttctctcttggtcttctc-ccttgcctt 28288442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 24563475 - 24563564
Alignment:
Q  183 aatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||| ||||||||||||||||||||||||||||| |  | | |  ||||  ||||  |||||||||||||||||||||||||||||||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaatcgattccctagttcttctctcttggtcttctctccttgcctt 24563564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 24641644 - 24641612
Alignment:
Q  239 agttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||||||||    
T  24641644 agttcttctctcttggtcttctctccttgcctt 24641612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29097741 - 29097789
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctga 69  Q
    |||||||| ||||||||||||| ||||||| ||||||| |||||||||||    
T  29097741 atagattaggaaatcatactaatcatcaaa-tacaacagtataaacctga 29097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 271
Target Start/End: Original strand, 135304 - 135563
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||| |||||||||||||| | |||||||||||||||||    
T  135304 atcaacaacatagattaagaaatcatactaac-atcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaat 135402  T
Q  111 ttcccaattttaccct-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    | | |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  135403 t-ctcaattttacctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaa 135501  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  135502 agacaaatagcacagcaaatcagttcctaagctcttctctcttggtcttctctccttgcctt 135563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 25181121 - 25180880
Alignment:
Q  9 acatcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaaccctta 108  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||   ||||||||||||||||| | |||| |||||||| |    
T  25181121 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaa 25181022  T
Q  109 atttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181021 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 25180922  T
Q  209 aagacaaatagcataacaaatcagttcctaagttcttctctc 250  Q
    |||||||| |||| | ||||||||||||||||||||||||||    
T  25180921 aagacaaaaagcacagcaaatcagttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 10441 - 10679
Alignment:
Q  10 catcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaa 109  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| || | ||||||||||||||||| | |||| |||||||| ||    
T  10441 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaa 10540  T
Q  110 tttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10541 tttcccaattttaccttaagaacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaa 10640  T
Q  210 agacaaatagcataacaaatcagttcctaagttcttctc 248  Q
    ||||||| |||| | ||||||||||||||||| ||||||    
T  10641 agacaaaaagcacagcaaatcagttcctaagtccttctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 27207778 - 27207649
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagt 241  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  242 tcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||||||||    
T  27207678 tcttctctcttggtcttctctccttgcctt 27207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 26885179 - 26885307
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagt 241  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  242 tcttctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||| |||||||||||||||    
T  26885278 tcttctctcttggttttctctccttgcctt 26885307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 23168351 - 23168229
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttcttct 247  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||| |||| | |||| | || |||||||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaa-agcacagcaaaaccgtccctaagttcttct 23168253  T
Q  248 ctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||    
T  23168252 ctcttggtcttctctccttgcctt 23168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 23579608 - 23579486
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttcttct 247  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||| |||| | |||| | || |||||||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaa-agcacagcaaaaccgtccctaagttcttct 23579510  T
Q  248 ctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||    
T  23579509 ctcttggtcttctctccttgcctt 23579486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 23265123 - 23265197
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23265123 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 23280191 - 23280265
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23280191 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 27366566 - 27366477
Alignment:
Q  183 aatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||| ||||||||||||||||||||||||||||| |  | | |  ||||  ||||  |||||||||||||||||||||||||||||||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaatcgattccctagttcttctctcttggtcttctctccttgcctt 27366477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 5706075 - 5706008
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaa 5706008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 23168483 - 23168413
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaa 90  Q
    |||||||||||||||||||| | ||||||| |||||||   ||||| ||| ||||| ||||||||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaa 23168413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 23579740 - 23579670
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaa 90  Q
    |||||||||||||||||||| | ||||||| |||||||   ||||| ||| ||||| ||||||||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaa 23579670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 5705984 - 5705952
Alignment:
Q  239 agttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||||| |||||    
T  5705984 agttcttctctcttggtcttctctcctagcctt 5705952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 11 - 271
Target Start/End: Complemental strand, 50161 - 49899
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| |||||| ||||||||||||||||||| | |  || || |||||||||||||||||||||| |||||||||||||| | ||||||||||||||| |    
T  50161 atcaacaacatggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 50062  T
Q  111 ttcccaatttt-accctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 209  Q
    ||||||||||| ||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50061 ttcccaatttttaccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaa 49962  T
Q  210 agacaaatagcataac-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| |||||||    
T  49961 agacaaatagcacaacaaaatcagttcctaagttcttctctcttggttttctctctttgcctt 49899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 4e-84; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 16147020 - 16146791
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| |||||| ||||||||||||||||||| |||  || ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| |    
T  16147020 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16146921  T
Q  111 ttcccaattttaccctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 210  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16146920 ttccaaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16146821  T
Q  211 gacaaatagcataac-aaatcagttcctaa 239  Q
    ||||||||||| | | ||||||||||||||    
T  16146820 gacaaatagcacagcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 27906139 - 27906328
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatt 119  Q
    |||||||||||||||||||  | ||||||| |||||||   ||||| ||||||||| |||||||||||||| | || ||| |  || ||||| | |||||    
T  27906139 atagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaatt-ctcaatt 27906237  T
Q  120 ttaccct-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||| | | ||||||  ||| |||  |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906238 ttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 14486624 - 14486713
Alignment:
Q  111 ttcccaattttaccct-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacct 198  Q
    |||||||||||| | | ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| |||| || |||||||||||    
T  14486624 ttcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 271
Target Start/End: Original strand, 53483708 - 53483831
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttcttct 247  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||| |  | | |  ||||  |||   |||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagcaatcgattctctagttcttct 53483807  T
Q  248 ctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||| |||||    
T  53483808 ctcttggtcttctctcctagcctt 53483831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 202  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 46 - 271
Target Start/End: Complemental strand, 2067 - 1842
Alignment:
Q  46 caaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaattttaccct-aagaacagttcaattgat 144  Q
    |||| |||||||  |||||||| ||||||| |||||||||||||| | |||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  2067 caaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgat 1969  T
Q  145 taattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttct 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||||| |||||||||||||    
T  1968 taattttcagaaattatatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttct 1869  T
Q  245 tctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||    
T  1868 tctctcttggtcttctctccttgcctt 1842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 9201 - 9396
Alignment:
Q  11 atcatcaacatagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaat 110  Q
    |||| ||||||||||| |||||||||||||| ||||||| |||||||  |||||||| ||||||| |||||||||||||| | |||||||||||||||||    
T  9201 atcaacaacatagattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaat 9300  T
Q  111 ttcccaattttaccct-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 206  Q
    | |||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9301 t-cccaattttacttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 52 - 271
Target Start/End: Original strand, 904 - 1121
Alignment:
Q  52 acaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaattttaccctaagaacagttcaattgattaatttt 151  Q
    ||||| |||||||||| | ||||| || ||||||| ||| | |  |||||||||| | ||||||||||||||| ||||||||||| ||||| ||||||||    
T  904 acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccataagaacagttaaattgcttaatttt 1002  T
Q  152 cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttcttctctct 251  Q
    ||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| |||| | ||||||| |||||| ||||||||||||    
T  1003 cagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaaa-agcacagcaaatcaattcctaggttcttctctct 1101  T
Q  252 tggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||    
T  1102 tggtcttctctccttgcctt 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 10222 - 10364
Alignment:
Q  129 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaa 228  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||| | ||||||| |||| | ||||    
T  10222 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaa 10321  T
Q  229 tcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  10322 tccgttcctaagttcttctctcttggtcttctctccttgcctt 10364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 493086 - 492958
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagt 241  Q
    ||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||| ||||||| |||| | |||||| ||||||||||    
T  493086 gattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagt 492988  T
Q  242 tcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||||||||    
T  492987 tcttctctcttggtcttctctccttgcctt 492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 10250 - 10125
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttctt 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||| |||| | |||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  246 ctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||||    
T  10150 ctctcttggtcttctctccttgcctt 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 11111 - 11079
Alignment:
Q  173 attgaaagataatcccacccttaccttagaatt 205  Q
    |||||| ||||||||||||||||||||||||||    
T  11111 attgaaggataatcccacccttaccttagaatt 11079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 1580 - 1455
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttctt 245  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||| |||| | |||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  246 ctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||||    
T  1480 ctctcttggtcttctctccttgcctt 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 1233 - 1425
Alignment:
Q  22 agattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt 121  Q
    |||||| ||||||||||||| ||||||  || |||||| ||||||||| |||||  | ||||||| ||| | ||||||||  ||| | ||||||||||||    
T  1233 agattaggaaatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaatttt 1330  T
Q  122 accctaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||| ||||||||||| ||||| ||||||||||||||  ||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||    
T  1331 accttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaaa 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 16243 - 16059
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatt 119  Q
    ||||||||  |||||||||||| ||||||| |||||||| || ||||||||||||  || ||||||| ||| | ||||||||||||| |||| || | ||    
T  16243 atagattagaaaatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaatt-ccaattt 16147  T
Q  120 ttaccctaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 206  Q
    ||| | ||| ||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  16146 ttatcttaaaaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattg 16059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 91374 - 91144
Alignment:
Q  29 gaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt---accc 125  Q
    ||||||||| ||| ||||||| ||||||||||||||||| | ||||| || ||||||| ||| |    |||||||||| ||||||||||||||   |||     
T  91374 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccct-aatttcccaatttttttacca 91278  T
Q  126 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataac 225  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||  ||  | |    
T  91277 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataaagtgc--agc 91180  T
Q  226 aaatcagttcctaagttcttctctcttggtcttctc 261  Q
    ||| || || ||||| ||||||||||||||||||||    
T  91179 aaaccaatttctaagctcttctctcttggtcttctc 91144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 97100 - 96870
Alignment:
Q  29 gaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt---accc 125  Q
    ||||||||| ||| ||||||| ||||||||||||||||| | ||||| || ||||||| ||| |    |||||||||| ||||||||||||||   |||     
T  97100 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccct-aatttcccaatttttttacca 97004  T
Q  126 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataac 225  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||  ||  | |    
T  97003 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataaagtgc--agc 96906  T
Q  226 aaatcagttcctaagttcttctctcttggtcttctc 261  Q
    ||| || || ||||| ||||||||||||||||||||    
T  96905 aaaccaatttctaagctcttctctcttggtcttctc 96870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 22 - 271
Target Start/End: Complemental strand, 6036 - 5786
Alignment:
Q  22 agattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatttt 121  Q
    |||||||||||||||||  | ||||||| ||||||||  ||||| | ||||||| |||||| ||||||| | || | | |  || ||||| | |||||||    
T  6036 agattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaatt-ctcaatttt 5939  T
Q  122 accct-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatag 219  Q
    | | | ||||||  ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |     
T  5938 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaagaa 5839  T
Q  220 cata-acaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 271  Q
     | | |  |||| |||||  |||||||||||||||||||||||||||||||||    
T  5838 aacacagcaatcggttccctagttcttctctcttggtcttctctccttgcctt 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 3461 - 3332
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagt 241  Q
    ||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||||||| ||||   |||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  242 tcttctctcttggtcttctctccttgcctt 271  Q
    ||| |||||||||||||||||| |||||||    
T  3361 tctcctctcttggtcttctctcgttgcctt 3332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 6 - 125
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcataacaaatcagttcctaagttcttct 247  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||  ||  | ||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataaagtgc--agcaagtcaattcctaagctcttct 103  T
Q  248 ctcttggtcttctctccttgcct 270  Q
    |||||||||||||| ||||||||    
T  104 ctcttggtcttctc-ccttgcct 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 13947 - 13879
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 13879  T

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Target: scaffold0261 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 23751 - 23562
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatt 119  Q
    |||||||||||||||||||| | ||||||| |||||||   ||||| ||||||||| | |||||||||||| | || ||| |  || ||||| | |||||    
T  23751 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaatt-ctcaatt 23653  T
Q  120 ttaccct-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||  | | ||||||  |||  || ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23652 ttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

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Target: scaffold0026 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 111686 - 111812
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcata-acaaatcagttcctaagttct 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||| |  | | |  ||||  |||   ||||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagcaatcgattctctagttct 111785  T
Q  245 tctctcttggtcttctctccttgcctt 271  Q
    |||||||||||||||||||||||||||    
T  111786 tctctcttggtcttctctccttgcctt 111812  T

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Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

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Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 205  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

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Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 73281 - 73347
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | |||||||    
T  73281 gattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

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Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 73158 - 73228
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaa 90  Q
    |||||||||||||||||||  | ||||||| |||||||   ||||| ||||||||| ||| ||||||||||    
T  73158 atagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaa 73228  T

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Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 717 - 770
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

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Target: scaffold0107 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 40714 - 40524
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatt 119  Q
    ||||||||||||||||| || | ||||||| |||||||   ||||| |||| |||| ||| || ||||||| | || ||| |||||| ||||||||||||    
T  40714 atagattaagaaatcattctgaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccct-aatttcccaatt 40616  T
Q  120 ttaccct-aagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    ||   || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  40615 tttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 40524  T

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Target: scaffold0222 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 16801 - 16875
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  16801 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 135346 - 135530
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacctgattcttataccttttctttcaagaacatcattaacccttaatttcccaatt 119  Q
    ||||||||||||||||| || | ||||||| |||||||   ||||| |||| |||| ||| || ||||||| | || ||| |||||| ||||||||||||    
T  135346 atagattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccct-aatttcccaatt 135444  T
Q  120 ttaccct-aagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 202  Q
    ||   || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135445 tttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0099 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 12830 - 13019
Alignment:
Q  20 atagattaagaaatcatactaaccatcaaagtacaacattataaacct-gattcttataccttttctttcaagaacat-cattaacccttaatttccc-- 115  Q
    |||||||| ||||||||||||| |||  || ||||||||||||||||| ||||||||   | |||| ||||  | ||| |||||||||| ||||||||      
T  12830 atagattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttcccca 12929  T
Q  116 aattttacc-ctaagaacagttcaa---ttgattaa-ttttcagaaattatatattatgactattg-aaagataatcccacccttacctt 199  Q
    | |||||||  ||||||||||| ||   | |||||| |||| |||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  12930 atttttacctttaagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

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Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 45326 - 45259
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 216  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaa 45259  T

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Target: scaffold0129; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 45235 - 45203
Alignment:
Q  239 agttcttctctcttggtcttctctccttgcctt 271  Q
    ||||||||||||||||||||||||||| |||||    
T  45235 agttcttctctcttggtcttctctcctagcctt 45203  T

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Target: scaffold0461 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 82 - 8
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  82 aagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0146 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 13613 - 13687
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  13613 aagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  127 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 22646 - 22585
Alignment:
Q  147 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 208  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || |||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgca 22585  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 202  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 198  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 932 - 987
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  142 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 34330 - 34276
Alignment:
Q  146 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 200  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34330 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 210  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

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Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  148 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

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Target: scaffold0796 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 1784 - 1732
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 1732  T

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Target: scaffold0796; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 5807 - 5755
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 5755  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 294 - 346
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  149 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 201  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

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