View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16306_low_15 (Length: 259)

Name: NF16306_low_15
Description: NF16306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16306_low_15
NF16306_low_15
[»] chr4 (60 HSPs)
chr4 (35-255)||(14038908-14039128)
chr4 (35-254)||(15091157-15091376)
chr4 (35-256)||(44053088-44053308)
chr4 (35-235)||(16377164-16377363)
chr4 (35-249)||(44928565-44928778)
chr4 (35-257)||(22636692-22636913)
chr4 (35-226)||(7798985-7799176)
chr4 (35-237)||(12903035-12903224)
chr4 (35-256)||(3096902-3097111)
chr4 (11-257)||(17047702-17047935)
chr4 (35-237)||(7089155-7089345)
chr4 (31-256)||(14052951-14053164)
chr4 (35-200)||(8846689-8846854)
chr4 (35-205)||(44102520-44102688)
chr4 (31-200)||(15552129-15552296)
chr4 (35-201)||(12774313-12774477)
chr4 (35-200)||(24029057-24029220)
chr4 (35-200)||(13812451-13812614)
chr4 (42-198)||(16596963-16597117)
chr4 (35-164)||(6190783-6190912)
chr4 (35-171)||(16239634-16239769)
chr4 (35-200)||(22633855-22634018)
chr4 (138-237)||(7893978-7894077)
chr4 (159-257)||(23374125-23374222)
chr4 (35-200)||(20156932-20157095)
chr4 (11-83)||(15121422-15121494)
chr4 (35-201)||(21814945-21815109)
chr4 (35-201)||(21815274-21815438)
chr4 (35-201)||(21818367-21818531)
chr4 (11-75)||(16356572-16356636)
chr4 (11-78)||(13569945-13570012)
chr4 (47-128)||(39705942-39706023)
chr4 (11-92)||(44676051-44676132)
chr4 (11-83)||(15094201-15094273)
chr4 (11-75)||(16348311-16348375)
chr4 (11-83)||(16487697-16487769)
chr4 (11-83)||(23843907-23843979)
chr4 (11-78)||(12570454-12570521)
chr4 (188-257)||(16239764-16239833)
chr4 (56-249)||(52242856-52243048)
chr4 (116-200)||(3332201-3332283)
chr4 (47-258)||(15464583-15464794)
chr4 (11-71)||(16243030-16243090)
chr4 (8-71)||(2015194-2015257)
chr4 (35-105)||(13844948-13845018)
chr4 (30-200)||(15099665-15099834)
chr4 (11-69)||(16678219-16678277)
chr4 (55-105)||(43198250-43198300)
chr4 (11-71)||(11250191-11250251)
chr4 (11-71)||(16351478-16351538)
chr4 (11-71)||(36133592-36133652)
chr4 (47-126)||(15868289-15868368)
chr4 (65-103)||(17046727-17046765)
chr4 (56-98)||(32306582-32306624)
chr4 (34-71)||(3413212-3413249)
chr4 (34-71)||(18602398-18602435)
chr4 (34-71)||(18608992-18609029)
chr4 (34-71)||(42997103-42997140)
chr4 (11-71)||(1951391-1951451)
chr4 (11-71)||(43255790-43255850)
[»] chr8 (65 HSPs)
chr8 (35-255)||(6759516-6759736)
chr8 (35-259)||(16091983-16092206)
chr8 (35-236)||(18878879-18879079)
chr8 (35-226)||(23406669-23406860)
chr8 (55-259)||(22875321-22875524)
chr8 (35-257)||(18818052-18818272)
chr8 (35-256)||(20536467-20536687)
chr8 (35-257)||(22626993-22627214)
chr8 (35-257)||(28648686-28648907)
chr8 (35-205)||(41598494-41598663)
chr8 (35-226)||(21923570-21923761)
chr8 (35-173)||(7373090-7373228)
chr8 (30-200)||(17141229-17141397)
chr8 (12-224)||(25362770-25362971)
chr8 (31-200)||(5865915-5866082)
chr8 (34-257)||(23648811-23649033)
chr8 (35-237)||(21918652-21918843)
chr8 (33-200)||(21249697-21249862)
chr8 (33-200)||(21255535-21255700)
chr8 (31-256)||(16199296-16199508)
chr8 (35-143)||(21674076-21674184)
chr8 (34-256)||(31971514-31971724)
chr8 (30-200)||(21491308-21491476)
chr8 (35-200)||(26355340-26355504)
chr8 (31-128)||(45130669-45130766)
chr8 (11-75)||(377714-377778)
chr8 (11-83)||(30642910-30642982)
chr8 (2-92)||(19899514-19899604)
chr8 (8-78)||(24756154-24756224)
chr8 (11-75)||(20465658-20465722)
chr8 (11-90)||(22010298-22010377)
chr8 (47-110)||(38854905-38854968)
chr8 (35-128)||(19801069-19801162)
chr8 (11-75)||(15602636-15602700)
chr8 (11-75)||(15611088-15611152)
chr8 (11-83)||(16185156-16185228)
chr8 (11-92)||(19976864-19976947)
chr8 (11-92)||(19983512-19983595)
chr8 (30-200)||(39834147-39834316)
chr8 (11-75)||(16860956-16861020)
chr8 (11-71)||(17353556-17353616)
chr8 (11-83)||(21168340-21168412)
chr8 (11-71)||(22028973-22029033)
chr8 (11-78)||(23776452-23776520)
chr8 (47-110)||(6520772-6520835)
chr8 (12-75)||(16409875-16409938)
chr8 (12-83)||(21161735-21161806)
chr8 (11-75)||(16411888-16411952)
chr8 (31-75)||(21389091-21389135)
chr8 (11-67)||(22057768-22057824)
chr8 (188-256)||(45130793-45130860)
chr8 (36-75)||(21395626-21395665)
chr8 (36-75)||(21790119-21790158)
chr8 (12-71)||(23252393-23252452)
chr8 (26-128)||(23760473-23760575)
chr8 (39-75)||(17926354-17926390)
chr8 (11-83)||(19259221-19259292)
chr8 (11-75)||(20856044-20856108)
chr8 (11-71)||(22045274-22045334)
chr8 (35-122)||(21414869-21414956)
chr8 (44-98)||(20499076-20499130)
chr8 (196-257)||(7373028-7373088)
chr8 (34-71)||(18619894-18619931)
chr8 (160-200)||(37116664-37116704)
chr8 (11-71)||(39094571-39094631)
[»] chr6 (56 HSPs)
chr6 (35-255)||(19303183-19303402)
chr6 (35-259)||(20594029-20594252)
chr6 (40-255)||(29060800-29061014)
chr6 (43-254)||(18409477-18409687)
chr6 (35-255)||(22779869-22780088)
chr6 (35-259)||(25628997-25629220)
chr6 (35-226)||(17287438-17287629)
chr6 (35-256)||(20637936-20638145)
chr6 (35-201)||(29808525-29808691)
chr6 (35-201)||(28496115-28496280)
chr6 (35-256)||(18821472-18821681)
chr6 (34-257)||(20360612-20360823)
chr6 (31-196)||(1561622-1561786)
chr6 (35-198)||(19652512-19652674)
chr6 (31-225)||(16920282-16920465)
chr6 (35-200)||(25611365-25611530)
chr6 (35-201)||(18457029-18457193)
chr6 (35-200)||(21939699-21939862)
chr6 (34-200)||(4667854-4668019)
chr6 (31-249)||(22831768-22831974)
chr6 (47-199)||(27332938-27333089)
chr6 (47-199)||(27393678-27393829)
chr6 (34-143)||(4189327-4189436)
chr6 (34-200)||(4185464-4185629)
chr6 (11-83)||(21834509-21834581)
chr6 (34-143)||(4674701-4674810)
chr6 (42-237)||(11185780-11185963)
chr6 (35-200)||(15894072-15894237)
chr6 (11-71)||(18907549-18907609)
chr6 (11-83)||(21739641-21739713)
chr6 (47-201)||(23019721-23019874)
chr6 (34-132)||(31155039-31155137)
chr6 (47-200)||(22080391-22080543)
chr6 (11-75)||(16523022-16523086)
chr6 (11-75)||(22429660-22429724)
chr6 (40-99)||(22334529-22334588)
chr6 (11-97)||(15041169-15041255)
chr6 (11-71)||(17804613-17804673)
chr6 (35-196)||(25603027-25603188)
chr6 (11-71)||(1645121-1645181)
chr6 (11-71)||(9481923-9481983)
chr6 (11-75)||(18180925-18180989)
chr6 (11-71)||(20803182-20803242)
chr6 (11-71)||(25766798-25766858)
chr6 (11-67)||(29096123-29096179)
chr6 (11-69)||(20907611-20907669)
chr6 (30-75)||(22439238-22439283)
chr6 (35-88)||(25956263-25956316)
chr6 (11-71)||(16741623-16741683)
chr6 (148-200)||(18180800-18180852)
chr6 (160-200)||(19668688-19668728)
chr6 (35-75)||(19863416-19863456)
chr6 (11-75)||(22405685-22405748)
chr6 (11-71)||(23657050-23657110)
chr6 (11-75)||(25641802-25641866)
chr6 (148-200)||(25641939-25641991)
[»] scaffold0217 (1 HSPs)
scaffold0217 (35-258)||(16241-16464)
[»] chr7 (61 HSPs)
chr7 (35-259)||(3564006-3564229)
chr7 (35-259)||(38227736-38227959)
chr7 (35-237)||(9509467-9509668)
chr7 (42-255)||(15143686-15143898)
chr7 (35-256)||(12699091-12699311)
chr7 (8-237)||(16385873-16386090)
chr7 (35-205)||(17061602-17061771)
chr7 (35-200)||(44014489-44014653)
chr7 (31-256)||(40443648-40443860)
chr7 (35-204)||(44116816-44116983)
chr7 (31-256)||(27847482-27847695)
chr7 (30-200)||(28504938-28505106)
chr7 (35-201)||(810771-810936)
chr7 (33-196)||(15754527-15754689)
chr7 (35-200)||(9751192-9751355)
chr7 (35-200)||(18302494-18302657)
chr7 (35-196)||(39267288-39267447)
chr7 (35-201)||(12756359-12756523)
chr7 (31-200)||(34201099-34201266)
chr7 (35-200)||(2831948-2832110)
chr7 (30-211)||(26212299-26212469)
chr7 (31-103)||(11995696-11995768)
chr7 (11-83)||(17137682-17137754)
chr7 (166-237)||(10589316-10589386)
chr7 (56-257)||(12255454-12255654)
chr7 (11-83)||(12321361-12321433)
chr7 (11-78)||(9703700-9703767)
chr7 (47-110)||(47832212-47832275)
chr7 (35-225)||(68036-68225)
chr7 (11-92)||(11880672-11880753)
chr7 (11-75)||(10508701-10508765)
chr7 (11-83)||(12187442-12187514)
chr7 (11-90)||(2760549-2760628)
chr7 (11-90)||(3272209-3272288)
chr7 (12-83)||(15211857-15211928)
chr7 (35-110)||(18006045-18006120)
chr7 (64-226)||(16056617-16056778)
chr7 (11-75)||(14430315-14430379)
chr7 (11-71)||(15581108-15581168)
chr7 (12-71)||(16583650-16583709)
chr7 (47-201)||(16219370-16219523)
chr7 (47-128)||(16324392-16324473)
chr7 (11-71)||(11313064-11313124)
chr7 (11-71)||(12318543-12318603)
chr7 (11-71)||(13635099-13635159)
chr7 (11-71)||(15604902-15604962)
chr7 (11-71)||(26292811-26292871)
chr7 (11-71)||(42205530-42205590)
chr7 (55-226)||(22073205-22073375)
chr7 (11-71)||(8917842-8917902)
chr7 (11-71)||(17701275-17701335)
chr7 (47-105)||(2279772-2279830)
chr7 (30-128)||(9389332-9389430)
chr7 (34-71)||(13462177-13462214)
chr7 (30-75)||(24054905-24054950)
chr7 (11-71)||(9445788-9445848)
chr7 (148-200)||(9593642-9593694)
chr7 (148-200)||(9644605-9644657)
chr7 (11-71)||(16724261-16724321)
chr7 (35-75)||(18154479-18154519)
chr7 (35-75)||(19649127-19649167)
[»] chr5 (49 HSPs)
chr5 (35-259)||(9078208-9078431)
chr5 (35-259)||(1096723-1096946)
chr5 (35-257)||(21985789-21986010)
chr5 (35-237)||(24529498-24529700)
chr5 (35-257)||(25421790-25422011)
chr5 (35-237)||(13095772-13095973)
chr5 (35-237)||(25431672-25431873)
chr5 (35-256)||(23390138-23390358)
chr5 (35-257)||(24493826-24494047)
chr5 (42-237)||(13025588-13025782)
chr5 (35-207)||(11580887-11581058)
chr5 (31-256)||(21292619-21292832)
chr5 (35-205)||(36154470-36154639)
chr5 (35-196)||(21565863-21566023)
chr5 (30-200)||(19660474-19660643)
chr5 (11-200)||(22119811-22119998)
chr5 (35-200)||(22959175-22959339)
chr5 (35-226)||(22075306-22075487)
chr5 (34-237)||(8286494-8286685)
chr5 (35-195)||(19669219-19669379)
chr5 (40-200)||(24766984-24767142)
chr5 (35-200)||(21871213-21871377)
chr5 (35-200)||(21875493-21875657)
chr5 (31-224)||(22107022-22107204)
chr5 (56-257)||(22144308-22144508)
chr5 (11-83)||(14079576-14079648)
chr5 (11-75)||(17918781-17918845)
chr5 (11-83)||(18769623-18769695)
chr5 (11-83)||(21887252-21887324)
chr5 (11-83)||(22032744-22032816)
chr5 (12-75)||(21366286-21366349)
chr5 (12-75)||(31342539-31342602)
chr5 (47-225)||(21329149-21329326)
chr5 (14-83)||(23512535-23512604)
chr5 (11-75)||(20805983-20806047)
chr5 (11-75)||(23201805-23201869)
chr5 (11-60)||(23572510-23572559)
chr5 (11-75)||(23500964-23501028)
chr5 (47-128)||(21498671-21498752)
chr5 (159-208)||(21501919-21501968)
chr5 (11-71)||(1858606-1858666)
chr5 (11-71)||(12028195-12028255)
chr5 (161-201)||(20026706-20026746)
chr5 (11-71)||(22760081-22760141)
chr5 (11-71)||(24222304-24222364)
chr5 (12-75)||(37724340-37724403)
chr5 (11-60)||(17410874-17410923)
chr5 (11-71)||(16674568-16674628)
chr5 (11-71)||(26742376-26742436)
[»] scaffold0056 (3 HSPs)
scaffold0056 (34-257)||(16856-17078)
scaffold0056 (40-127)||(79009-79096)
scaffold0056 (11-78)||(13696-13763)
[»] chr2 (40 HSPs)
chr2 (35-226)||(23660311-23660501)
chr2 (35-237)||(27753853-27754054)
chr2 (35-257)||(298457-298677)
chr2 (35-256)||(32451571-32451791)
chr2 (35-226)||(22730875-22731066)
chr2 (35-257)||(22737822-22738043)
chr2 (55-257)||(23076700-23076899)
chr2 (40-257)||(22337373-22337589)
chr2 (35-199)||(22133859-22134020)
chr2 (31-237)||(20309383-20309577)
chr2 (44-200)||(23071614-23071768)
chr2 (35-237)||(23286139-23286329)
chr2 (31-256)||(37765-37978)
chr2 (57-197)||(28406297-28406436)
chr2 (31-113)||(28291940-28292022)
chr2 (35-128)||(23654052-23654145)
chr2 (12-92)||(24658059-24658139)
chr2 (43-128)||(25176228-25176313)
chr2 (11-78)||(45677774-45677841)
chr2 (11-75)||(25963336-25963400)
chr2 (11-75)||(21917935-21917999)
chr2 (11-75)||(24674012-24674076)
chr2 (11-75)||(37525100-37525164)
chr2 (159-257)||(23708383-23708481)
chr2 (11-77)||(40621827-40621893)
chr2 (11-75)||(24654967-24655032)
chr2 (11-71)||(21327196-21327256)
chr2 (11-83)||(22798745-22798817)
chr2 (11-75)||(22811553-22811617)
chr2 (11-63)||(24735827-24735879)
chr2 (195-256)||(23654188-23654248)
chr2 (11-71)||(21318265-21318325)
chr2 (11-75)||(22740579-22740643)
chr2 (11-75)||(22758334-22758398)
chr2 (11-71)||(24175227-24175287)
chr2 (34-71)||(27263667-27263704)
chr2 (11-71)||(10327273-10327333)
chr2 (148-200)||(22740716-22740768)
chr2 (31-71)||(24870307-24870347)
chr2 (11-71)||(40428892-40428952)
[»] chr1 (48 HSPs)
chr1 (35-257)||(50209856-50210076)
chr1 (35-257)||(34510038-34510259)
chr1 (35-237)||(22532547-22532748)
chr1 (35-208)||(433314-433486)
chr1 (35-257)||(22354214-22354435)
chr1 (40-256)||(27250387-27250591)
chr1 (35-223)||(33681301-33681488)
chr1 (30-226)||(20135476-20135671)
chr1 (31-201)||(21754350-21754518)
chr1 (30-257)||(20846867-20847082)
chr1 (35-199)||(52927623-52927786)
chr1 (32-237)||(38801041-38801234)
chr1 (30-257)||(21026938-21027153)
chr1 (35-218)||(22355827-22355998)
chr1 (35-218)||(22357513-22357684)
chr1 (35-143)||(22238000-22238108)
chr1 (35-200)||(20248592-20248756)
chr1 (43-200)||(20918917-20919072)
chr1 (14-97)||(18181743-18181826)
chr1 (43-128)||(22921517-22921602)
chr1 (11-83)||(22432402-22432474)
chr1 (11-83)||(22830997-22831069)
chr1 (11-78)||(42864830-42864897)
chr1 (35-100)||(21301180-21301245)
chr1 (15-90)||(21787665-21787740)
chr1 (11-83)||(21023066-21023138)
chr1 (11-71)||(24782730-24782790)
chr1 (11-73)||(3472545-3472607)
chr1 (32-200)||(20091113-20091281)
chr1 (19-83)||(6152283-6152347)
chr1 (35-105)||(43697769-43697839)
chr1 (34-71)||(46975883-46975920)
chr1 (11-75)||(8761252-8761316)
chr1 (11-71)||(21305730-21305790)
chr1 (11-71)||(23818929-23818989)
chr1 (11-71)||(36818938-36818998)
chr1 (12-71)||(20228440-20228499)
chr1 (34-125)||(21162117-21162208)
chr1 (160-258)||(26065196-26065295)
chr1 (32-71)||(45489394-45489433)
chr1 (159-224)||(21162056-21162121)
chr1 (11-71)||(3704716-3704776)
chr1 (11-71)||(16080074-16080134)
chr1 (11-71)||(18393593-18393653)
chr1 (64-128)||(20637236-20637300)
chr1 (35-75)||(21714986-21715026)
chr1 (35-75)||(22468339-22468379)
chr1 (11-71)||(45309996-45310056)
[»] scaffold0627 (1 HSPs)
scaffold0627 (35-256)||(163-383)
[»] scaffold0122 (2 HSPs)
scaffold0122 (35-259)||(33136-33360)
scaffold0122 (34-255)||(25706-25926)
[»] chr3 (80 HSPs)
chr3 (35-255)||(14973114-14973333)
chr3 (35-257)||(40213363-40213584)
chr3 (35-226)||(26687175-26687366)
chr3 (35-257)||(18438792-18439013)
chr3 (35-257)||(25476027-25476248)
chr3 (34-257)||(14572846-14573068)
chr3 (35-257)||(11424405-11424626)
chr3 (35-257)||(14576475-14576696)
chr3 (35-249)||(17247928-17248141)
chr3 (63-256)||(13442533-13442725)
chr3 (40-256)||(17488115-17488331)
chr3 (35-256)||(17499597-17499818)
chr3 (30-256)||(20698084-20698298)
chr3 (35-201)||(12933952-12934117)
chr3 (115-226)||(43841220-43841331)
chr3 (40-196)||(9513228-9513384)
chr3 (40-196)||(9521203-9521359)
chr3 (35-201)||(32307983-32308147)
chr3 (35-201)||(49667726-49667890)
chr3 (11-257)||(23082979-23083224)
chr3 (35-200)||(12340068-12340231)
chr3 (35-200)||(16097645-16097809)
chr3 (35-197)||(49389286-49389446)
chr3 (31-200)||(13209966-13210133)
chr3 (35-201)||(53070341-53070505)
chr3 (31-144)||(14179693-14179805)
chr3 (35-201)||(1644325-1644489)
chr3 (35-200)||(12852006-12852169)
chr3 (35-200)||(14665921-14666084)
chr3 (35-200)||(14669076-14669239)
chr3 (35-200)||(14735434-14735597)
chr3 (30-214)||(12399506-12399679)
chr3 (35-143)||(16104151-16104259)
chr3 (35-170)||(4588457-4588590)
chr3 (11-83)||(12173213-12173285)
chr3 (12-96)||(321634-321718)
chr3 (11-75)||(11298148-11298212)
chr3 (11-83)||(14878124-14878196)
chr3 (11-83)||(15051943-15052015)
chr3 (11-83)||(15060719-15060791)
chr3 (40-256)||(30030098-30030302)
chr3 (11-83)||(856563-856635)
chr3 (11-75)||(3402585-3402649)
chr3 (11-75)||(12496690-12496754)
chr3 (11-75)||(18383536-18383600)
chr3 (11-75)||(23077097-23077161)
chr3 (15-75)||(26190632-26190692)
chr3 (35-106)||(12171759-12171830)
chr3 (11-73)||(323026-323088)
chr3 (47-201)||(324549-324702)
chr3 (12-78)||(17524794-17524860)
chr3 (43-128)||(15471310-15471395)
chr3 (35-112)||(17247162-17247239)
chr3 (11-71)||(7792976-7793036)
chr3 (11-83)||(16369835-16369907)
chr3 (11-75)||(17674194-17674258)
chr3 (35-103)||(43842589-43842657)
chr3 (47-105)||(2050855-2050913)
chr3 (11-71)||(326794-326854)
chr3 (11-71)||(15483078-15483138)
chr3 (11-71)||(20461130-20461190)
chr3 (11-71)||(31097184-31097244)
chr3 (47-257)||(42386669-42386878)
chr3 (186-224)||(16796837-16796875)
chr3 (14-75)||(11852006-11852067)
chr3 (35-75)||(3389600-3389640)
chr3 (11-71)||(11594769-11594829)
chr3 (15-71)||(15849719-15849775)
chr3 (11-71)||(16690635-16690695)
chr3 (11-71)||(16697208-16697268)
chr3 (31-128)||(16809775-16809868)
chr3 (11-75)||(19725531-19725595)
chr3 (47-105)||(14234899-14234957)
chr3 (11-71)||(11557015-11557075)
chr3 (160-201)||(37250932-37250973)
chr3 (56-105)||(52523390-52523439)
chr3 (11-71)||(1982440-1982500)
chr3 (35-75)||(15877471-15877511)
chr3 (160-200)||(22110116-22110156)
chr3 (11-75)||(23052696-23052760)
[»] scaffold0305 (1 HSPs)
scaffold0305 (35-256)||(20662-20882)
[»] scaffold0228 (4 HSPs)
scaffold0228 (35-259)||(4763-4987)
scaffold0228 (35-259)||(12345-12569)
scaffold0228 (35-259)||(22297-22521)
scaffold0228 (11-75)||(18262-18326)
[»] scaffold0011 (2 HSPs)
scaffold0011 (35-226)||(52200-52391)
scaffold0011 (35-237)||(167632-167822)
[»] scaffold0145 (1 HSPs)
scaffold0145 (55-257)||(39018-39218)
[»] scaffold0026 (5 HSPs)
scaffold0026 (35-257)||(40114-40335)
scaffold0026 (35-142)||(39573-39680)
scaffold0026 (77-185)||(26555-26662)
scaffold0026 (69-200)||(59179-59308)
scaffold0026 (197-237)||(26173-26213)
[»] scaffold0042 (4 HSPs)
scaffold0042 (35-256)||(23944-24163)
scaffold0042 (11-75)||(34529-34593)
scaffold0042 (24-78)||(41185-41239)
scaffold0042 (11-71)||(64269-64329)
[»] scaffold0647 (1 HSPs)
scaffold0647 (34-254)||(5762-5981)
[»] scaffold0292 (2 HSPs)
scaffold0292 (35-235)||(622-821)
scaffold0292 (35-257)||(3728-3949)
[»] scaffold0121 (1 HSPs)
scaffold0121 (35-226)||(8175-8365)
[»] scaffold0021 (5 HSPs)
scaffold0021 (35-256)||(124844-125061)
scaffold0021 (40-143)||(62932-63035)
scaffold0021 (160-201)||(136132-136173)
scaffold0021 (160-201)||(144840-144881)
scaffold0021 (35-75)||(175203-175243)
[»] scaffold0839 (1 HSPs)
scaffold0839 (35-249)||(1720-1932)
[»] scaffold0175 (2 HSPs)
scaffold0175 (35-257)||(13350-13571)
scaffold0175 (31-199)||(34437-34603)
[»] scaffold0034 (2 HSPs)
scaffold0034 (35-256)||(51526-51746)
scaffold0034 (47-105)||(32945-33003)
[»] scaffold0016 (2 HSPs)
scaffold0016 (35-256)||(2110-2330)
scaffold0016 (34-200)||(207160-207324)
[»] scaffold0540 (1 HSPs)
scaffold0540 (46-218)||(666-837)
[»] scaffold0003 (1 HSPs)
scaffold0003 (35-259)||(339593-339815)
[»] scaffold0080 (2 HSPs)
scaffold0080 (35-257)||(40170-40390)
scaffold0080 (11-83)||(18275-18347)
[»] scaffold0141 (1 HSPs)
scaffold0141 (126-259)||(39732-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (126-259)||(74948-75080)
[»] scaffold0084 (1 HSPs)
scaffold0084 (35-259)||(10419-10637)
[»] scaffold0413 (2 HSPs)
scaffold0413 (35-205)||(15257-15426)
scaffold0413 (160-200)||(12884-12924)
[»] scaffold0231 (1 HSPs)
scaffold0231 (35-257)||(23140-23361)
[»] scaffold0120 (4 HSPs)
scaffold0120 (35-259)||(32601-32824)
scaffold0120 (35-259)||(46181-46404)
scaffold0120 (35-257)||(16345-16565)
scaffold0120 (11-71)||(19647-19707)
[»] scaffold0070 (1 HSPs)
scaffold0070 (40-259)||(4779-4997)
[»] scaffold0639 (1 HSPs)
scaffold0639 (35-257)||(8733-8954)
[»] scaffold0130 (2 HSPs)
scaffold0130 (121-259)||(28086-28223)
scaffold0130 (35-126)||(28924-29015)
[»] scaffold0456 (1 HSPs)
scaffold0456 (31-237)||(10075-10269)
[»] scaffold0598 (1 HSPs)
scaffold0598 (31-235)||(701-893)
[»] scaffold0142 (2 HSPs)
scaffold0142 (35-205)||(17090-17259)
scaffold0142 (94-200)||(7472-7576)
[»] scaffold0100 (1 HSPs)
scaffold0100 (35-201)||(20426-20591)
[»] scaffold1842 (1 HSPs)
scaffold1842 (35-237)||(702-892)
[»] scaffold0028 (1 HSPs)
scaffold0028 (35-201)||(132967-133132)
[»] scaffold0114 (3 HSPs)
scaffold0114 (31-256)||(15114-15327)
scaffold0114 (12-83)||(7718-7789)
scaffold0114 (31-85)||(32914-32968)
[»] scaffold0150 (1 HSPs)
scaffold0150 (30-201)||(32397-32567)
[»] scaffold0395 (1 HSPs)
scaffold0395 (35-233)||(604-802)
[»] scaffold0165 (2 HSPs)
scaffold0165 (11-224)||(3771-3973)
scaffold0165 (11-224)||(7835-8037)
[»] scaffold1984 (1 HSPs)
scaffold1984 (35-208)||(437-609)
[»] scaffold0484 (1 HSPs)
scaffold0484 (11-257)||(1172-1406)
[»] scaffold0427 (1 HSPs)
scaffold0427 (31-237)||(13773-13967)
[»] scaffold0211 (1 HSPs)
scaffold0211 (35-201)||(28451-28616)
[»] scaffold0556 (1 HSPs)
scaffold0556 (35-200)||(7126-7290)
[»] scaffold0193 (1 HSPs)
scaffold0193 (35-256)||(13470-13679)
[»] scaffold0023 (3 HSPs)
scaffold0023 (35-201)||(101709-101873)
scaffold0023 (11-83)||(38119-38191)
scaffold0023 (84-128)||(39863-39907)
[»] scaffold0352 (1 HSPs)
scaffold0352 (35-173)||(17650-17788)
[»] scaffold0161 (1 HSPs)
scaffold0161 (30-200)||(2082-2250)
[»] scaffold0125 (1 HSPs)
scaffold0125 (30-200)||(45426-45596)
[»] scaffold0718 (1 HSPs)
scaffold0718 (31-218)||(4780-4956)
[»] scaffold0102 (1 HSPs)
scaffold0102 (30-208)||(19573-19750)
[»] scaffold0192 (1 HSPs)
scaffold0192 (35-200)||(10226-10389)
[»] scaffold0113 (1 HSPs)
scaffold0113 (31-217)||(32361-32536)
[»] scaffold0032 (1 HSPs)
scaffold0032 (31-237)||(51857-52051)
[»] scaffold0235 (1 HSPs)
scaffold0235 (40-256)||(11171-11375)
[»] scaffold0218 (1 HSPs)
scaffold0218 (30-196)||(28917-29081)
[»] scaffold0628 (1 HSPs)
scaffold0628 (55-201)||(2465-2609)
[»] scaffold0075 (1 HSPs)
scaffold0075 (35-200)||(7936-8099)
[»] scaffold1137 (1 HSPs)
scaffold1137 (31-201)||(1939-2108)
[»] scaffold0001 (3 HSPs)
scaffold0001 (35-143)||(161056-161164)
scaffold0001 (14-71)||(422163-422221)
scaffold0001 (11-71)||(173706-173766)
[»] scaffold0490 (1 HSPs)
scaffold0490 (31-256)||(2211-2424)
[»] scaffold0403 (1 HSPs)
scaffold0403 (30-226)||(5136-5321)
[»] scaffold0309 (1 HSPs)
scaffold0309 (32-256)||(6869-7081)
[»] scaffold0221 (1 HSPs)
scaffold0221 (35-197)||(12451-12611)
[»] scaffold0358 (2 HSPs)
scaffold0358 (35-226)||(224-404)
scaffold0358 (35-226)||(5000-5180)
[»] scaffold0064 (2 HSPs)
scaffold0064 (31-226)||(47274-47458)
scaffold0064 (11-75)||(64282-64346)
[»] scaffold0266 (1 HSPs)
scaffold0266 (35-147)||(18600-18712)
[»] scaffold0166 (1 HSPs)
scaffold0166 (40-200)||(9481-9639)
[»] scaffold0124 (1 HSPs)
scaffold0124 (33-200)||(24291-24456)
[»] scaffold0876 (1 HSPs)
scaffold0876 (35-133)||(2727-2825)
[»] scaffold0261 (2 HSPs)
scaffold0261 (30-200)||(15974-16142)
scaffold0261 (6-75)||(1776-1845)
[»] scaffold0037 (2 HSPs)
scaffold0037 (35-200)||(79974-80137)
scaffold0037 (11-67)||(21188-21244)
[»] scaffold0351 (1 HSPs)
scaffold0351 (35-225)||(16568-16747)
[»] scaffold0810 (1 HSPs)
scaffold0810 (35-128)||(3318-3411)
[»] scaffold0347 (1 HSPs)
scaffold0347 (35-200)||(344-506)
[»] scaffold0475 (1 HSPs)
scaffold0475 (34-200)||(9391-9556)
[»] scaffold0035 (1 HSPs)
scaffold0035 (11-83)||(46346-46418)
[»] scaffold0503 (1 HSPs)
scaffold0503 (35-201)||(12243-12407)
[»] scaffold0031 (3 HSPs)
scaffold0031 (40-197)||(20073-20228)
scaffold0031 (11-71)||(53981-54041)
scaffold0031 (11-75)||(65412-65476)
[»] scaffold0389 (1 HSPs)
scaffold0389 (35-103)||(13250-13318)
[»] scaffold0207 (1 HSPs)
scaffold0207 (35-127)||(2286-2378)
[»] scaffold0096 (1 HSPs)
scaffold0096 (11-83)||(15968-16040)
[»] scaffold0029 (1 HSPs)
scaffold0029 (11-75)||(13194-13258)
[»] scaffold0311 (1 HSPs)
scaffold0311 (11-78)||(6697-6764)
[»] scaffold0297 (2 HSPs)
scaffold0297 (11-86)||(15298-15373)
scaffold0297 (11-73)||(10440-10502)
[»] scaffold0138 (1 HSPs)
scaffold0138 (43-226)||(13229-13411)
[»] scaffold0425 (1 HSPs)
scaffold0425 (11-97)||(571-657)
[»] scaffold1895 (1 HSPs)
scaffold1895 (11-75)||(867-931)
[»] scaffold0423 (1 HSPs)
scaffold0423 (31-91)||(10910-10970)
[»] scaffold0247 (2 HSPs)
scaffold0247 (160-224)||(6561-6625)
scaffold0247 (35-122)||(6470-6557)
[»] scaffold0106 (5 HSPs)
scaffold0106 (137-225)||(1575-1663)
scaffold0106 (137-225)||(7552-7640)
scaffold0106 (31-97)||(1692-1758)
scaffold0106 (31-97)||(7669-7735)
scaffold0106 (31-75)||(16086-16130)
[»] scaffold0476 (2 HSPs)
scaffold0476 (12-75)||(6018-6081)
scaffold0476 (12-75)||(7213-7276)
[»] scaffold0367 (1 HSPs)
scaffold0367 (11-86)||(1318-1393)
[»] scaffold0327 (1 HSPs)
scaffold0327 (11-90)||(687-766)
[»] scaffold0324 (1 HSPs)
scaffold0324 (11-78)||(15834-15901)
[»] scaffold0215 (1 HSPs)
scaffold0215 (12-75)||(27259-27322)
[»] scaffold0088 (2 HSPs)
scaffold0088 (160-255)||(21171-21265)
scaffold0088 (30-103)||(21301-21374)
[»] scaffold0078 (1 HSPs)
scaffold0078 (47-201)||(10842-10995)
[»] scaffold0278 (1 HSPs)
scaffold0278 (35-128)||(5979-6072)
[»] scaffold0020 (1 HSPs)
scaffold0020 (35-128)||(15472-15565)
[»] scaffold1124 (1 HSPs)
scaffold1124 (11-83)||(2304-2376)
[»] scaffold0615 (1 HSPs)
scaffold0615 (11-75)||(1703-1767)
[»] scaffold0393 (1 HSPs)
scaffold0393 (11-75)||(1926-1990)
[»] scaffold0216 (1 HSPs)
scaffold0216 (11-75)||(16740-16804)
[»] scaffold0210 (2 HSPs)
scaffold0210 (11-75)||(21425-21489)
scaffold0210 (11-75)||(29317-29381)
[»] scaffold0158 (2 HSPs)
scaffold0158 (11-75)||(3275-3339)
scaffold0158 (11-75)||(6941-7005)
[»] scaffold0081 (3 HSPs)
scaffold0081 (11-83)||(15099-15171)
scaffold0081 (11-83)||(24114-24189)
scaffold0081 (11-83)||(39538-39613)
[»] scaffold0079 (1 HSPs)
scaffold0079 (11-75)||(44486-44550)
[»] scaffold0671 (1 HSPs)
scaffold0671 (11-78)||(6536-6603)
[»] scaffold1296 (1 HSPs)
scaffold1296 (12-77)||(824-889)
[»] scaffold0621 (1 HSPs)
scaffold0621 (35-128)||(6923-7015)
[»] scaffold0412 (1 HSPs)
scaffold0412 (14-75)||(6038-6099)
[»] scaffold0010 (2 HSPs)
scaffold0010 (35-200)||(130222-130386)
scaffold0010 (160-201)||(60479-60520)
[»] scaffold1326 (1 HSPs)
scaffold1326 (11-75)||(1119-1183)
[»] scaffold0284 (1 HSPs)
scaffold0284 (11-71)||(18770-18830)
[»] scaffold0280 (1 HSPs)
scaffold0280 (11-75)||(18921-18985)
[»] scaffold0171 (1 HSPs)
scaffold0171 (11-71)||(35140-35200)
[»] scaffold0151 (1 HSPs)
scaffold0151 (43-103)||(10555-10615)
[»] scaffold0043 (1 HSPs)
scaffold0043 (11-83)||(18668-18740)
[»] scaffold0008 (1 HSPs)
scaffold0008 (11-75)||(30364-30428)
[»] scaffold0530 (1 HSPs)
scaffold0530 (47-106)||(682-741)
[»] scaffold0116 (2 HSPs)
scaffold0116 (45-128)||(43436-43519)
scaffold0116 (45-128)||(47356-47439)
[»] scaffold0555 (3 HSPs)
scaffold0555 (43-105)||(10218-10280)
scaffold0555 (31-99)||(994-1062)
scaffold0555 (159-201)||(10305-10347)
[»] scaffold0507 (1 HSPs)
scaffold0507 (47-201)||(7711-7864)
[»] scaffold0405 (1 HSPs)
scaffold0405 (11-97)||(9322-9408)
[»] scaffold0333 (2 HSPs)
scaffold0333 (47-105)||(7022-7080)
scaffold0333 (47-105)||(14402-14460)
[»] scaffold0357 (1 HSPs)
scaffold0357 (162-258)||(15866-15963)
[»] scaffold0676 (1 HSPs)
scaffold0676 (11-83)||(4855-4927)
[»] scaffold0342 (1 HSPs)
scaffold0342 (11-71)||(6900-6960)
[»] scaffold0220 (1 HSPs)
scaffold0220 (11-83)||(4552-4624)
[»] scaffold0174 (1 HSPs)
scaffold0174 (11-83)||(18072-18144)
[»] scaffold0012 (2 HSPs)
scaffold0012 (64-128)||(227878-227942)
scaffold0012 (11-71)||(24598-24658)
[»] scaffold0004 (2 HSPs)
scaffold0004 (11-71)||(10214-10274)
scaffold0004 (35-75)||(70232-70272)
[»] scaffold0320 (1 HSPs)
scaffold0320 (47-128)||(12381-12462)
[»] scaffold1220 (1 HSPs)
scaffold1220 (11-71)||(2217-2277)
[»] scaffold0483 (1 HSPs)
scaffold0483 (11-71)||(747-807)
[»] scaffold0451 (1 HSPs)
scaffold0451 (11-63)||(11430-11482)
[»] scaffold0439 (2 HSPs)
scaffold0439 (11-71)||(2065-2125)
scaffold0439 (11-71)||(9925-9985)
[»] scaffold0109 (1 HSPs)
scaffold0109 (11-71)||(45534-45594)
[»] scaffold0044 (1 HSPs)
scaffold0044 (11-71)||(19604-19664)
[»] scaffold0036 (2 HSPs)
scaffold0036 (11-71)||(66045-66105)
scaffold0036 (11-71)||(71186-71246)
[»] scaffold0017 (4 HSPs)
scaffold0017 (11-71)||(14943-15003)
scaffold0017 (34-83)||(190923-190972)
scaffold0017 (34-83)||(192626-192675)
scaffold0017 (31-71)||(19485-19525)
[»] scaffold0104 (2 HSPs)
scaffold0104 (11-90)||(2247-2325)
scaffold0104 (11-90)||(9929-10007)
[»] scaffold1552 (1 HSPs)
scaffold1552 (34-71)||(769-806)
[»] scaffold0772 (1 HSPs)
scaffold0772 (14-71)||(6432-6489)
[»] scaffold0346 (1 HSPs)
scaffold0346 (30-71)||(17361-17402)
[»] scaffold0139 (1 HSPs)
scaffold0139 (30-75)||(20419-20464)
[»] scaffold0013 (1 HSPs)
scaffold0013 (12-61)||(2304-2353)
[»] scaffold1048 (1 HSPs)
scaffold1048 (11-71)||(1853-1913)
[»] scaffold0198 (1 HSPs)
scaffold0198 (35-75)||(26837-26877)
[»] scaffold0184 (1 HSPs)
scaffold0184 (11-71)||(3854-3914)
[»] scaffold0167 (1 HSPs)
scaffold0167 (35-75)||(36034-36074)
[»] scaffold0131 (1 HSPs)
scaffold0131 (35-75)||(36894-36934)
[»] scaffold0101 (1 HSPs)
scaffold0101 (11-71)||(8576-8636)
[»] scaffold0022 (1 HSPs)
scaffold0022 (160-200)||(128735-128775)


Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 35 - 255
Target Start/End: Complemental strand, 14039128 - 14038908
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| || ||||||| || ||||||  ||||||||| |||||||||    
T  14039128 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattt 14039029  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14039028 tagaatgaaacttttggaaatctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 14038929  T
Q  235 cgaactgtgtcgcacaagttg 255  Q
    ||| |||||||||||||||||    
T  14038928 cgatctgtgtcgcacaagttg 14038908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 15091376 - 15091157
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||   ||||||||||||||||  || ||||||||||||| || |||||||||| || ||||||  ||||||||||||| |||||    
T  15091376 ttttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattt 15091277  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15091276 tagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 15091177  T
Q  235 cgaactgtgtcgcacaagtt 254  Q
    ||| ||||||||||||||||    
T  15091176 cgatctgtgtcgcacaagtt 15091157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 44053308 - 44053088
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||||| || |||||||||||||||| || ||||||| || || |||  |||||||||| |||||||     
T  44053308 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagatta 44053209  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||| ||||||||| ||| | ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44053208 taggatgaaacttgtgggattctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgtt-agattttg 44053110  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  44053109 cgacctttgttgcacgagttgt 44053088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 16377164 - 16377363
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||| | || |||||||||||||||| |||||||| | || || |||  ||||||||||||| |||      
T  16377164 ttttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcg 16377263  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  16377264 tagaatgaa-cttttgggaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttg 16377362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 44928565 - 44928778
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| ||| |||||||||||| ||||| |||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  44928565 ttttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 44928664  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||| ||||| ||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||  ||||| ||| |  ||| |||||||    
T  44928665 tagaatgaaac-tttgggaatctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttg 44928763  T
Q  235 cgaactgtgtcgcac 249  Q
    ||| || ||||||||    
T  44928764 cgatctttgtcgcac 44928778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 22636913 - 22636692
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||| ||||||||  |||||||||||||||||| || || ||||||||||||| |||||||||| || || |||  |||||||||||||| |||     
T  22636913 ttttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaaattg 22636814  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | |||||| ||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||| |||||| || |||||    
T  22636813 tagaatgaaacttgtgggattctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgtt-aggttttg 22636715  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  22636714 cgacctttgttgcacgagttgtt 22636692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 7799176 - 7798985
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||| ||||||||  ||||||||||||||||||||| |||||| ||||||||| |||||| | | || || |||  ||||||||||||||| ||     
T  7799176 ttttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaagtttg 7799077  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||| | | | ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  7799076 tagaatgaaacttgtagtattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgtcttgtta 7798985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 12903224 - 12903035
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||          
T  12903224 ttttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa------ 12903132  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         |||||||| ||| | ||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  12903131 -----tgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgtt-agattttg 12903038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 3097111 - 3096902
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||||| || |||||||| ||| |||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||          
T  3097111 ttttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa------ 3097018  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         |||||||| ||| | ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  3097017 -----tgaaacttgtgggattctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttg 3096924  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  3096923 cgacctttgttgcacgagttgt 3096902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 17047702 - 17047935
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||||||||  ||||||||||| |||||| ||||||||| |||||||| | || ||     
T  17047702 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtagg 17047801  T
Q  111 atggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaa 210  Q
    |||  |||||||            | ||||||||||| ||| | ||||||||||||||||||  | |||||||||||||||||||||||||||||| |||    
T  17047802 atgagattgaac------------tggaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaa 17047889  T
Q  211 acagagtgccttgttaagattttgcgaactgtgtcgcacaagttgtt 257  Q
    ||||||||||||| | ||| ||||||| || ||| |||| |||||||    
T  17047890 acagagtgccttg-tgagactttgcgacctttgttgcacgagttgtt 17047935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 7089345 - 7089155
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| | ||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||          
T  7089345 ttttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa------ 7089252  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         |||||||| ||| | ||||||||||||||||||  | |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  7089251 -----tgaaacttatgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgtt-agattttg 7089158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 14052951 - 14053164
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||| || || |||  ||||||| |||||      
T  14052951 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaa-- 14053048  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||| ||| | |||||||||||||| |||  | |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  14053049 ---------ttaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgtt-agat 14053138  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  14053139 tttgcgacctttgttgcacgagttgt 14053164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 8846854 - 8846689
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  8846854 ttttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 8846755  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||  |||||  | |   |||| |||||||||  | ||| ||||||||||||||||||||    
T  8846754 tagaatgaattttttgtgagttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 205
Target Start/End: Complemental strand, 44102688 - 44102520
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| | ||||| |||||||| ||| ||| || || || |||  |||||||||||| ||||||    
T  44102688 ttttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatgaa-gaatgtaggatgagattgaacctggatagattt 44102590  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacc 205  Q
    |||||| |||||||  ||| ||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  44102589 tagaataaaactttgagaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 44102520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 200
Target Start/End: Complemental strand, 15552296 - 15552129
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||| ||||||||||    
T  15552296 gtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaag 15552197  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |  ||||||| ||| ||| |  ||||||||| ||||||||||| | |||||||||||| |||||||||||    
T  15552196 a-cttagaatcaaaatttggagaatctgacc-gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 12774477 - 12774313
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||  |||||||||||| |||  |    
T  12774477 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgt 12774378  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||  |||||  || ||| ||||||||||||||  | |||||||||||||||||||||||||    
T  12774377 tagaatgaa--ttttgtgaa-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 24029220 - 24029057
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||  ||||||||||| ||||||||||||| || ||| |||||| || || |||  ||||||||||||||||  |    
T  24029220 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaaga-ct 24029122  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  24029121 tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 13812451 - 13812614
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| |||||||| || ||||||||||||| || |||||||| | || || |||  ||||||||||||||||  |    
T  13812451 ttttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaaga-ct 13812549  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||||| || |||||||||  | ||||||||||||||||||||||||    
T  13812550 tagaatgaaactttggagaatctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 198
Target Start/End: Complemental strand, 16597117 - 16596963
Alignment:
Q  42 ttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatg 141  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  ||||||||||||||||  ||||||||    
T  16597117 ttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaaga-cttagaatg 16597019  T
Q  142 aaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcg 198  Q
    ||| ||| |  ||||||||| ||||||||||  | ||| ||||| ||||||| ||||    
T  16597018 aaaatttagagaatctgacc-gaactcgccatggcgagtagaggttctcgccccgcg 16596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 6190912 - 6190783
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||| ||| || || |||  ||||||||||||||||||     
T  6190912 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattg 6190813  T
Q  135 tagaatgaaacttttggaaatctgacctga 164  Q
    ||||||||||||| ||| | | ||||||||    
T  6190812 tagaatgaaacttgtgggattttgacctga 6190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 16239634 - 16239769
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaag-attggagaatggaattgaacctggaaagatt 133  Q
    |||| ||||||||||||   ||||||||||||||||||||| |||||||||||||||| ||||||||| | || ||||||  |||||||||||||||| |    
T  16239634 ttttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaaaga-t 16239732  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgcc 171  Q
    |||||||||||||| ||| | ||| |||||||||||||    
T  16239733 ttagaatgaaacttgtgg-attctaacctgaactcgcc 16239769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 22633855 - 22634018
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||||||||  ||||||||  |||||||||| ||||||||||||| || |||||||||| || || |||  ||||||||||||||||  |    
T  22633855 ttttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 22633953  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  |||| ||  |||||||||||  | ||||||||||||||||||||||||    
T  22633954 tagaatgaaactttggataatcaga-ttgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 7894077 - 7893978
Alignment:
Q  138 aatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcga 237  Q
    |||||||||| ||| | ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| | ||||||| | ||||||||    
T  7894077 aatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcga 7893978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 23374125 - 23374222
Alignment:
Q  159 acctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgtt 257  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| | || ||| |||| |||||||    
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgtt-agattttgcaacctttgttgcacgagttgtt 23374222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 20156932 - 20157095
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||||| |  ||||||||| ||||||||||| ||||||||||||| || |||||||||| || || |||  |||||||||||||||   |    
T  20156932 ttttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaag-gct 20157030  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||||    ||| ||| ||||||||||||  | | ||||||||||||||||||||||    
T  20157031 tagaatgaaactttgaagaatatga-ctgaactcgccatggcgtgcagaggctctcgcctcgcgag 20157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 15121422 - 15121494
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  15121422 cagagagcatgttgaattatgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 15121494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 21814945 - 21815109
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||||| || ||||||| |||||||| |||||||||| |  ||||||  | ||||||||| |  | ||    
T  21814945 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctgg-attaatt 21815043  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     |||||| ||||||| | || ||||| |||||||||||  | ||| |||||||||||||||||||||    
T  21815044 aagaatg-aactttttggaagctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 21815274 - 21815438
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||||| || ||||||| |||||||| |||||||| | |  ||||||  | ||||||||| |  | ||    
T  21815274 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctgg-attaatt 21815372  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     |||||| ||||||| | || |||||||||||||||||  | ||| |||||||||||||||||||||    
T  21815373 aagaatg-aactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 21818367 - 21818531
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||||| || ||||||| |||||||| |||||||||| |  ||||||  | ||||||||| |  | ||    
T  21818367 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctgg-attaatt 21818465  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     |||||| ||||||| | || ||||| |||||||||||  | ||| |||||||||||||||||||||    
T  21818466 aagaatg-aactttttggaagctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21818531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16356572 - 16356636
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||    
T  16356572 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 16356636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 13570012 - 13569945
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  13570012 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaa 13569945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 39705942 - 39706023
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||| |   |||||||||||||    
T  39705942 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaa 39706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 44676132 - 44676051
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatg 92  Q
    |||||||||||| ||||| | ||||||| |||||||||||||| |||||||| ||||||||||||||| |||| || |||||    
T  44676132 cagagagcatgtagaattctatatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatg 44676051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 15094273 - 15094201
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  15094273 cagaaagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 15094201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16348311 - 16348375
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  16348311 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 16487697 - 16487769
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||||||||| ||||||||| ||||||||||| || ||||||||| |||| ||||||||| ||||    
T  16487697 cagagagcatgtcgaattctgtatttttgacttttgagttaaaccttagatgcctttgggtgcctaaagatgt 16487769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 23843979 - 23843907
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  23843979 cagagagcatgtagaattctgtacttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 23843907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 12570521 - 12570454
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||| ||||||||| |||||||| |||||||||||||||    
T  12570521 cagagagcatgtagaattctgtatttttgacttgtgagttgaaccttagatgtttttgagtgcctaaa 12570454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 16239764 - 16239833
Alignment:
Q  188 ctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgtt 257  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||| || ||| |||| |||||||    
T  16239764 ctcgcctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagttgtt 16239833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 52242856 - 52243048
Alignment:
Q  56 ttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaat 155  Q
    ||||||| ||| |||||||| ||||||| |||||||| | ||||||||||  ||||||  |||||||||||||   ||| |||||| |  | |||| | |    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcat-tgttgggagt 52242954  T
Q  156 ctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcac 249  Q
       |||||||||||||| || ||| |||||||||||||||||||||  |||||  ||||| ||| |  ||| |||||||||| || ||||||||    
T  52242955 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcac 52243048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 3332283 - 3332201
Alignment:
Q  116 attgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||||| || ||||||||||||| |  |||||||| |||||||||||  | ||||||||||||||||||||||||    
T  3332283 attgaacctggaaagactt-agaatgaaactttggagaatctgac-tgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 258
Target Start/End: Original strand, 15464583 - 15464794
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    |||||| | ||||||| |||||||||||| || |||| |||||||| ||||||||||||  ||| ||  |||||||||| ||   ||| |||||| |  |    
T  15464583 agttgatatttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggat-t 15464681  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaagattttgcgaactgtgtc 245  Q
    |||||   |   |||||||||| ||| || ||| |||||||||||||||||||||  |||||  ||||| || |||| ||| |||||||| | || ||||    
T  15464682 tttgggtgttacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtc 15464781  T
Q  246 gcacaagttgtta 258  Q
    |||||||||||||    
T  15464782 gcacaagttgtta 15464794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 16243030 - 16243090
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||| ||||||||||||||||  ||||| |||||||||||||| ||||||||| |||||||    
T  16243030 cagatagcatgtcgaattatgagtttttgacttttgagttgaaccttagatgcctttgagt 16243090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 2015257 - 2015194
Alignment:
Q  8 gatcagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| ||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  2015257 gatcaaagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 2015194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 13845018 - 13844948
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||||| ||| |||| |||||||    
T  13845018 ttttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaagatt 13844948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 15099834 - 15099665
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| || ||| ||| ||| |||||||| |||||||||||| ||| ||| | || ||| ||||||||||||| ||| ||  |||||||||||||     
T  15099834 tgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaat 15099735  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
      ||| |||||| || |||||  | |   ||||||||||||||  | ||| ||||||||||||||||||||    
T  15099734 agtttaagaatg-aatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 16678219 - 16678277
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttga 69  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||| |||||||    
T  16678219 cagagagcatgtcgaattctgagtttttgacttttgagttgaatcttagattcttttga 16678277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 43198250 - 43198300
Alignment:
Q  55 cttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    |||||||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  43198250 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatt 43198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 11250191 - 11250251
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  11250191 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttgagt 11250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 16351478 - 16351538
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  16351478 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttgagt 16351538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 36133592 - 36133652
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| ||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  36133592 cagagagcatgttgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 36133652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 15868289 - 15868368
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctgg 126  Q
    ||||||| |||||||| |||||||||||| || |||| |||||||| ||||||||| ||  ||| ||  |||||||||||    
T  15868289 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgg 15868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 17046765 - 17046727
Alignment:
Q  65 tttgagtgcctaaacatgtctaataatggttaggaaaga 103  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaaga 17046727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 32306582 - 32306624
Alignment:
Q  56 ttagatgcttttgagtgcctaaacatgtctaataatggttagg 98  Q
    ||||||| |||||||||||||||||||| |||||||| |||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattagg 32306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 3413249 - 3413212
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  3413249 tttttgacttttgagttgaaccttagatgcttttgagt 3413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 18602398 - 18602435
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  18602398 tttttgacttttgagttgaaccttagatgcttttgagt 18602435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 18608992 - 18609029
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  18608992 tttttgacttttgagttgaaccttagatgcttttgagt 18609029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 42997103 - 42997140
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  42997103 tttttgacttttgagttgaaacttagatgcctttgagt 42997140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 1951391 - 1951451
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||  || ||  ||||| |||||||||||||| ||||||||| |||||||    
T  1951391 cagagagcatgtcgttttctgagtttttgacttttgagttgaaccttagatgcctttgagt 1951451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 43255790 - 43255850
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||   |||||  ||||| |||||||||||||| ||||||||| |||||||    
T  43255790 cagagagcatgtcattttatgagtttttgacttttgagttgaaccttagatgcctttgagt 43255850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 9e-79; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 35 - 255
Target Start/End: Complemental strand, 6759736 - 6759516
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||| | |||||||||||||||| |||||||||| || ||||||  ||||||| |||||| ||||    
T  6759736 ttttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattt 6759637  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  6759636 tagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggattttg 6759537  T
Q  235 cgaactgtgtcgcacaagttg 255  Q
    | | |||||||||||||||||    
T  6759536 caatctgtgtcgcacaagttg 6759516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 16091983 - 16092206
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||| | |||||||||||||||| |||||||||| || ||||||  ||| |||||| ||||||||    
T  16091983 ttttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaagattt 16092082  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     | ||  |||||||||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  16092083 aaaaaa-aaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttg 16092181  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| ||||||| |||||||||||||    
T  16092182 cgatctgtgtcacacaagttgttaa 16092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 35 - 236
Target Start/End: Original strand, 18878879 - 18879079
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  18878879 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 18878978  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacaga-gagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
    ||||||||||||| ||| | |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18878979 tagaatgaaacttgtgggattctgacctgaactcgcca-agacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-agatttt 18879076  T
Q  234 gcg 236  Q
    |||    
T  18879077 gcg 18879079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 23406860 - 23406669
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||| |||||||||||||     
T  23406860 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattg 23406761  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||| ||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23406760 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 23406669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 55 - 259
Target Start/End: Complemental strand, 22875524 - 22875321
Alignment:
Q  55 cttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaa 154  Q
    |||||||||||||||| | |||||||||| |||||||| ||||||||||||| |||| |   |||||||||||||||||||||||||||||||| ||||     
T  22875524 cttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactttgggaa- 22875426  T
Q  155 tctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagtt 254  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||| || |||||||||||||    
T  22875425 tctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagggctttgcgatctatgtcgcacaagtt 22875326  T
Q  255 gttaa 259  Q
    |||||    
T  22875325 gttaa 22875321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 18818052 - 18818272
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||| | || || |||  ||||||||||||||||||     
T  18818052 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattg 18818151  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    || ||||||||||||||   ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| || |||||    
T  18818152 taaaatgaaacttttgg-tttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtt-aggttttg 18818249  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  18818250 cgacctttgttgcacgagttgtt 18818272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 20536687 - 20536467
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||| || || |||  ||||||||||||||||||     
T  20536687 ttttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 20536588  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||| || || |||||    
T  20536587 tagaatgaaacttatgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttatt-aggttttg 20536489  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  20536488 cgacctttgttgcacgagttgt 20536467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 22627214 - 22626993
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||| ||||||||     
T  22627214 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctcgaaagattg 22627115  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||| ||| ||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||| | |||||||||||| ||||||| | |||||    
T  22627114 tagaatg-aacctttggaaatctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgttaggtttttg 22627016  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  22627015 cgacctttgttgcacgagttgtt 22626993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 28648686 - 28648907
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||| |||||| || || |||  ||||||| |||||||||||    
T  28648686 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagattt 28648785  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||| ||| ||| | ||||||||||||||||| | |||||||||||||||||| |||  |||||||||||||||||||||||||| |||||||    
T  28648786 -agaatgaaaccttttgaattttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttg 28648884  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  28648885 cgacctttgttgcacgagttgtt 28648907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 205
Target Start/End: Complemental strand, 41598663 - 41598494
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||| |||||| || ||||||  |||||||||||||||||||    
T  41598663 ttttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattt 41598564  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacc 205  Q
    ||||||||||| ||||| ||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  41598563 tagaatgaaac-tttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 41598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 21923570 - 21923761
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||||| || |||||||||||||||| |||||| ||| || || |||  |||||||||| ||||||||    
T  21923570 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaagattt 21923669  T
Q  135 tagaatgaaacttttggaaatctgacc-tgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
     |||||||||||||| | | ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21923670 -agaatgaaactttttggattctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 21923761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 7373228 - 7373090
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || ||| |||||||||||||||||||     
T  7373228 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattg 7373129  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccac 173  Q
    ||||||||||||| || || |||||||||||||||||||    
T  7373128 tagaatgaaacttgtgaaattctgacctgaactcgccac 7373090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 17141397 - 17141229
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| |||    
T  17141397 tgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaa 17141298  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||  ||||||||||| ||| |  |||| |||| ||||||||||  | ||||||||||||||||||||||||    
T  17141297 ga-cttagaatgaaaatttagagaatcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 25362770 - 25362971
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaa 111  Q
    ||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| |||||||| || |||||| ||||||||| |||||||||| || || |    
T  25362770 agagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtagga 25362869  T
Q  112 tggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaa 211  Q
    ||  ||||||||||           ||||||||||| ||| | ||||||||||||||||||  | |||||||||||||||||||| ||||||||| ||||    
T  25362870 tgagattgaacctg-----------gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaa 25362958  T
Q  212 cagagtgccttgt 224  Q
    |||||||||||||    
T  25362959 cagagtgccttgt 25362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 200
Target Start/End: Original strand, 5865915 - 5866082
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| ||||    
T  5865915 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaag 5866014  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |  ||||||||||| ||| |  ||||||||| ||||||||||  | ||||||||||||||||||||||||    
T  5866015 a-cttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 34 - 257
Target Start/End: Complemental strand, 23649033 - 23648811
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| |||||||||||||  |||||||||||||||||| || |||||||||||||||| |||||||||| || || |||  |||| ||||| |||||      
T  23649033 tttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaaga-c 23648935  T
Q  134 ttagaatgaaac-ttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattt 232  Q
    |||||||||||| |||||||| ||||||| ||||||||||  | || ||||||||||||||||| |||| |||||||||||||||| ||||||| | ||     
T  23648934 ttagaatgaaacattttggaattctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggttta 23648836  T
Q  233 tgcgaactgtgtcgcacaagttgtt 257  Q
    ||||| || ||| |||| |||||||    
T  23648835 tgcgacctttgttgcacgagttgtt 23648811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 237
Target Start/End: Original strand, 21918652 - 21918843
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||| ||||| || || | |  ||||||||||||||         
T  21918652 ttttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaaa----- 21918746  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         |||||||| ||| | ||||||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  21918747 -----tgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-agattttg 21918840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 200
Target Start/End: Complemental strand, 21249862 - 21249697
Alignment:
Q  33 attttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagat 132  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| || || |||  | ||||||||||||||     
T  21249862 atttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaaga- 21249764  T
Q  133 tttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
     || |||||||| ||| |  ||||||||| ||||||||||  | ||||||||||||||||||||||||    
T  21249763 cttggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 200
Target Start/End: Complemental strand, 21255700 - 21255535
Alignment:
Q  33 attttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagat 132  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| || || |||  ||||||||||||||||     
T  21255700 atttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaga- 21255602  T
Q  133 tttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
     || |||||||| ||| |  ||||||||| ||||||||||  | |||||| |||||||||||||||||    
T  21255601 cttggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 16199296 - 16199508
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||| |||||| |||||||||| || || |||  |||||||||          
T  16199296 gtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct------ 16199389  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
         ||||| ||||| | |||  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||| ||  |||    
T  16199390 -----agaattaaactgtgggat-tctgacctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaacagagtgacttatt-ggat 16199482  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  16199483 tttgcgacctttgttgcacgagttgt 16199508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 21674184 - 21674076
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||| || | |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  21674184 ttttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 21674085  T
Q  135 tagaatgaa 143  Q
    |||||||||    
T  21674084 tagaatgaa 21674076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 256
Target Start/End: Complemental strand, 31971724 - 31971514
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| |||||||||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||  || || |||  ||||||||||            
T  31971724 tttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctg-------- 31971633  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
       |||| |||||| ||  | ||||||||||||||||| | | ||||||||||| || ||||||||| |||||||||| |||||| |||||| |||||||    
T  31971632 ---gaattaaacttgtgagattctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaaatagagtgacttgtt-agatttt 31971537  T
Q  234 gcgaactgtgtcgcacaagttgt 256  Q
    |||| || ||| |||| ||||||    
T  31971536 gcgacctttgttgcacgagttgt 31971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 21491476 - 21491308
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  ||||||||| ||||    
T  21491476 tgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaa 21491377  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||  ||||||||||| ||| |  |||||||||  |||| ||||  | ||| ||||||||| ||||||||||    
T  21491376 ga-cttagaatgaaaatttagagaatctgacc-aaacttgccatggcgagtagaggctcttgcctcgcgag 21491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 26355340 - 26355504
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| ||| |||||||||||| |||||||||||||||| |||||| |||||| ||| ||  |||||||||||||||| ||    
T  26355340 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactt 26355439  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||  |||  ||| | | ||||||||| ||||  | ||| ||||||||||||||| ||||    
T  26355440 tagaatgaatttttgtgaattgt-acctgaacttgccatggcgagtagaggctctcgcctcacgag 26355504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 45130669 - 45130766
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||    
T  45130669 gtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 45130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 377778 - 377714
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||    
T  377778 cagagagcatgtcgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 30642910 - 30642982
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  30642910 cagagagcatgtcgaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 30642982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19899604 - 19899514
Alignment:
Q  2 gaggaggatcagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatg 92  Q
    ||||| ||||| ||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||| |||| || |||||    
T  19899604 gaggatgatcaaagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatg 19899514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 24756224 - 24756154
Alignment:
Q  8 gatcagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  24756224 gatcagagagcatgtaggattctgtattttttacttttgagttgaaccttagatgtttttgagtgcctaaa 24756154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 20465658 - 20465722
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||    
T  20465658 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 20465722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 22010298 - 22010377
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataa 90  Q
    |||||||||||| ||||| ||||||||| |||||| ||||||| ||||||||||||||||||||| || |||| ||||||    
T  22010298 cagagagcatgttgaattctgtatttttgactttttagttgaaccttagatgcttttgagtgccttaagatgtttaataa 22010377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 38854905 - 38854968
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||    
T  38854905 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggaga 38854968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 19801069 - 19801162
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||| |||||||||||||  ||||||||| | ||||||||| |||||||||||||||| |||||||||| | ||||||   |||||||||||||    
T  19801069 ttttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaa 19801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 15602636 - 15602700
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  15602636 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15602700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 15611088 - 15611152
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  15611088 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15611152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 16185228 - 16185156
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| | |||||| ||||||||||||||| ||||    
T  16185228 cagagagcatgttgaattctgtatttttgacttttgagttgaaccatagatgtttttgagtgcctaaagatgt 16185156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 19976947 - 19976864
Alignment:
Q  11 cagagagcatgtcgaattatgtatttttt--acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatg 92  Q
    |||||||||||| ||||| ||||||||||  |||||||||||||| |||||||| ||||||||||||||| |||| || |||||    
T  19976947 cagagagcatgtagaattttgtattttttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatg 19976864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 19983595 - 19983512
Alignment:
Q  11 cagagagcatgtcgaattatgtatttttt--acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatg 92  Q
    |||||||||||| ||||| ||||||||||  |||||||||||||| |||||||| ||||||||||||||| |||| || |||||    
T  19983595 cagagagcatgtagaattctgtattttttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatg 19983512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 39834316 - 39834147
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| || ||| ||| ||| |||||||| |||||||||||||||| ||| | |||||| ||||||||||||| ||| ||  |||||||||||||     
T  39834316 tgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaat 39834217  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
      ||| |||||||| | ||||  | |   ||||||||||||||  | ||| ||||||||||||||||||||    
T  39834216 agtttaagaatgaatc-tttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16860956 - 16861020
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||||  ||| |||| |||||||||||||| |||||||||||||||||||||    
T  16860956 cagagagcatgttgaatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16861020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 17353556 - 17353616
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||    
T  17353556 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagt 17353616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 21168340 - 21168412
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||||||| || ||||| ||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||    
T  21168340 cagagagcaggttgaattctgtatttttgacttttgagttgaaccttagaagtttttgagtgcctaaagatgt 21168412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22029033 - 22028973
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||||||||||||||||    
T  22029033 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcttttgagt 22028973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 23776452 - 23776520
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaac-ttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  23776452 cagagagcatgttgaattctgtatttttgacttttgagttgaacctttagatgtttttgagtgcctaaa 23776520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 6520835 - 6520772
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    ||||||| |||||||| ||||||||| || |||||||||||||||  |||||||||||||||||    
T  6520835 agttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggaga 6520772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 16409875 - 16409938
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||| |||||  ||| |||| |||||||||||||| |||||||||||||||||||||    
T  16409875 agagagcatgttgaatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 21161735 - 21161806
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||| || ||||| ||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||    
T  21161735 agagagcaggttgaattctgtatttttgacttttgagttgaaccttagaagtttttgagtgcctaaagatgt 21161806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16411888 - 16411952
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||| ||| ||||||||||||    
T  16411888 cagagagcatgttgaattttgtaattttgacttttgagttgaaccttaaatgtttttgagtgcct 16411952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 21389091 - 21389135
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  21389091 gtatttttgacttttgagttgaaccttagatgcttttgagtgcct 21389135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 22057824 - 22057768
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgctttt 67  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||||||||||||    
T  22057824 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgctttt 22057768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 45130793 - 45130860
Alignment:
Q  188 ctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||||| || ||| |||| ||||||    
T  45130793 ctcgcctcgcgagtgacccagaaacagagtgacttatt-agattttgcgacctttgttgcacgagttgt 45130860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 21395626 - 21395665
Alignment:
Q  36 ttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21395626 ttttacttttgagttgaaccttagatgcttttgagtgcct 21395665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 21790119 - 21790158
Alignment:
Q  36 ttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21790119 ttttacttttgagttgaaccttagatgcttttgagtgcct 21790158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 23252393 - 23252452
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  23252393 agagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 23252452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 23760473 - 23760575
Alignment:
Q  26 attatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctg 125  Q
    |||| ||| |||| |||||||||||||  | |  ||| |||||||| ||| |||||||||||||||| |||||||| |||||| | ||  ||||||||||    
T  23760473 attacgtaattttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctg 23760572  T
Q  126 gaa 128  Q
    |||    
T  23760573 gaa 23760575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 17926354 - 17926390
Alignment:
Q  39 tacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17926354 tacttttgagttgaaccttagatgcttttgagtgcct 17926390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 19259221 - 19259292
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |  | |||| |||||||||||||| ||||||||| |||||||||||||| ||||    
T  19259221 cagagagcatgttgaattcttgaattttgacttttgagttgaaccttagatgc-tttgagtgcctaaagatgt 19259292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 20856044 - 20856108
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||||  ||  |||| | |||||||||||| |||||||||||||||||||||    
T  20856044 cagagagcatgttgaatttcgtgattttgaattttgagttgaaccttagatgcttttgagtgcct 20856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22045334 - 22045274
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| || ||||||||||| ||||||||| |||||||    
T  22045334 cagagagcatgtcgaattctgagtttttgacctttgagttgaaccttagatgcctttgagt 22045274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 21414869 - 21414956
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaac 122  Q
    ||||||||||| ||| ||| |||||||| |||||||||||| || |||   | ||||| ||||||||||||| ||||||  |||||||    
T  21414869 tttttactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 20499130 - 20499076
Alignment:
Q  44 ttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttagg 98  Q
    ||||||||||  ||||||| |||||||||||| ||||||| |||||||| |||||    
T  20499130 ttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattagg 20499076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 7373088 - 7373028
Alignment:
Q  196 gcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgtt 257  Q
    ||||||||||||||||||||||| |||||| || |||||||| || ||| |||| |||||||    
T  7373088 gcgagtgacccagaaacagagtgtcttgtt-aggttttgcgacctttgttgcacgagttgtt 7373028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 18619931 - 18619894
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  18619931 tttttgacttttgagttgaaccttagatgcttttgagt 18619894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||| || ||| ||||||||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 39094571 - 39094631
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  || ||||  |||||||||||||| |||||||||||||||||    
T  39094571 cagagagcatgttgattttcgtgttttggacttttgagttgaaccttagatgcttttgagt 39094631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 9e-79; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 35 - 255
Target Start/End: Original strand, 19303183 - 19303402
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| ||||||||    
T  19303183 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt 19303282  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  19303283 -agaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttg 19303381  T
Q  235 cgaactgtgtcgcacaagttg 255  Q
    ||| || ||||||||||||||    
T  19303382 cgatctatgtcgcacaagttg 19303402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 20594252 - 20594029
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||||||||  ||| ||||| |||| || || |||  ||||||||||||||||||     
T  20594252 tttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaagattg 20594153  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    |||||| ||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20594152 tagaat-aaacttttggaaatctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttg 20594054  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| |||||||||||||||||||||    
T  20594053 cgatctgtgtcgcacaagttgttaa 20594029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 40 - 255
Target Start/End: Complemental strand, 29061014 - 29060800
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||  ||||||||||||||||||||| |||||||| ||||||| ||||||| || || || |||  |||||||||||||||||| |||||    
T  29061014 acttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaa 29060915  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaac 239  Q
    |||| |||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  29060914 tgaa-cttttggaaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacc 29060816  T
Q  240 tgtgtcgcacaagttg 255  Q
    | ||| |||| |||||    
T  29060815 tttgttgcacgagttg 29060800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 254
Target Start/End: Original strand, 18409477 - 18409687
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatga 142  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| ||||| |||||||||| || ||||||  ||||||||||||||||||| |||||||    
T  18409477 tttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattt-agaatga 18409575  T
Q  143 aacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgt 242  Q
    ||||||| ||| ||||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||| || |    
T  18409576 aactttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgaccttt 18409675  T
Q  243 gtcgcacaagtt 254  Q
    || |||| ||||    
T  18409676 gttgcacgagtt 18409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 35 - 255
Target Start/End: Original strand, 22779869 - 22780088
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  22779869 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 22779968  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | |||||||| |||||||||| |  |||| ||||||||||||||||||| ||| |||||||||||| | |||| || |||||    
T  22779969 tagaatgaaacttgtgggattctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaaacagagtgtcctgtt-aggttttg 22780067  T
Q  235 cgaactgtgtcgcacaagttg 255  Q
     || || ||| ||||||||||    
T  22780068 tgacctttgttgcacaagttg 22780088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 25628997 - 25629220
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||| ||||||| |||||||| | || || |||||||||| |||| ||||| |||||||| |||| ||||||  |||||||||||||| ||||    
T  25628997 ttttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattt 25629096  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    |||||| |||||||||  | | ||||||| |||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25629097 tagaat-aaacttttgtgattatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 25629195  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    |||  | ||| |||| |||||||||    
T  25629196 cgacttttgttgcacgagttgttaa 25629220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 17287438 - 17287629
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||| |||||||||||||     
T  17287438 ttttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattg 17287537  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||| ||| | |||||||| |||||||||| | ||  ||||||||| | |||| ||||||||||||||||||||| |||||||    
T  17287538 tagaatgaaacttgtgggattctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaaacagagtgtcttgtta 17287629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 256
Target Start/End: Original strand, 20637936 - 20638145
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||          
T  20637936 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa------ 20638029  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         |||||||| ||| | ||||||||||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  20638030 -----tgaaacttgtgggattctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgccttgtt-agattttg 20638123  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  20638124 cgacctttgttgcacgagttgt 20638145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 29808525 - 29808691
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaaga-tt 133  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||||||  |||||||||||||||| ||    
T  29808525 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagattt 29808624  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||||| ||||| ||||||||||||||||||||  | |||||||||||||||||||||||||    
T  29808625 ttagaatgaaac-tttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 28496115 - 28496280
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||||||  ||||||||||||||||  |    
T  28496115 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaaga-ct 28496213  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||||||||  ||||||||||||||||||||  | |||||||||||||||||||||||||    
T  28496214 tagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 256
Target Start/End: Original strand, 18821472 - 18821681
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||||| ||| || || |||  |||||||||||||          
T  18821472 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa------ 18821565  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         |||||||| ||| | ||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  18821566 -----tgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtt-agattttg 18821659  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  18821660 cgacctttgttgcacgagttgt 18821681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 257
Target Start/End: Original strand, 20360612 - 20360823
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| |||||| ||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||         
T  20360612 tttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----- 20360706  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
          |||||||| ||| | ||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||| |||||| || ||||    
T  20360707 ------tgaaacttgtgggattctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-aggtttt 20360799  T
Q  234 gcgaactgtgtcgcacaagttgtt 257  Q
    |||| || ||| |||| |||||||    
T  20360800 gcgacctttgttgcacgagttgtt 20360823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 1561786 - 1561622
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||  | ||||||  ||||||||||||||     
T  1561786 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaa- 1561688  T
Q  131 attttagaatg-aaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
    |  |||||||| |||||||||  ||||||||| ||||| ||||| | ||||| ||||||||||||||    
T  1561687 aacttagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 19652674 - 19652512
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| ||| |||||||||||| |||||||||||||||| ||||||||||||| ||||||  |||||||||||||||| ||    
T  19652674 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactt 19652575  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcg 198  Q
    |||||||||  |||  ||| | | ||||||||||||||  | ||| ||||||||||||||||||    
T  19652574 tagaatgaatttttgtgaattgt-acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 16920282 - 16920465
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||| ||||| || || ||   |||| ||||||||      
T  16920282 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctggaa-- 16920379  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
             | |||||| ||||| ||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||| |||| ||||||    
T  16920380 ---------ttaaacttatggaattctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgtt 16920465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 25611365 - 25611530
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||  || || || |||  |||| |||||||||||  |    
T  25611365 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaaga-ct 25611463  T
Q  135 tagaatgaaac-ttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||   || | | ||||||||||||||||||  ||||||||||||||||||||||||||    
T  25611464 tagaatgaaacaacttaggattctgacctgaactcgccatggagagcagaggctctcgcctcgcgag 25611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 18457193 - 18457029
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||||||| || ||||||  ||||||||||| |  | ||    
T  18457193 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attaatt 18457095  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     |||||| ||||||| | || |||||||||||| ||||  | ||| |||||||||||||||||||||    
T  18457094 aagaatg-aactttttggaagctgacctgaactagccatggcgagtagaggctctcgcctcgcgagt 18457029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 21939862 - 21939699
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| |||||||||  |||||||||| ||||||| ||||| || |||||||||| || || |||  ||||| ||||||||||  |    
T  21939862 ttttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaaga-ct 21939764  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||| ||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  21939763 tagaataaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 4667854 - 4668019
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| ||||||||| |||  ||||||||||||||||||||| |||| ||||||||| | |||||||||| || ||| ||  |||| ||||||||||| |    
T  4667854 tttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagt 4667953  T
Q  134 ttagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||  |||| |  | ||| ||||||||||||||  | ||| ||||||||||||||||||||    
T  4667954 ttagaatgaa--tttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 249
Target Start/End: Complemental strand, 22831974 - 22831768
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||  | ||||||||||||| || ||||  |||| |  || | |  |||||||||||||      
T  22831974 gtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacctggaa-- 22831877  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||  ||| | ||| ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| ||||||  |||    
T  22831876 ---------ttaaactgatgggattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgtt-ggat 22831787  T
Q  231 tttgcgaactgtgtcgcac 249  Q
    ||||||| || ||||||||    
T  22831786 tttgcgacctttgtcgcac 22831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 27332938 - 27333089
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| |||||||||||||||||| || ||||||| |||| ||| ||||||||||||  ||||||   ||||||||||||||||||||||||| || |    
T  27332938 agttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagt 27333036  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcga 199  Q
    ||||  | |   ||||||||||||||  | ||| |||||||||||||||||||    
T  27333037 tttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 27393678 - 27393829
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| |||||||||||||||||| || ||||||| |||| ||| ||||||||||||  ||||||   ||||||||||||||||||||||||| || |    
T  27393678 agttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagt 27393776  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcga 199  Q
    ||||  | |   ||||||||||||||  | ||| |||||||||||||||||||    
T  27393777 tttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 4189436 - 4189327
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||||||||||||| |||  ||||||||||||||||||||| |||| ||||||||| | |||||||||| || ||| ||  |||| ||||||||||| |    
T  4189436 ttttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagt 4189337  T
Q  134 ttagaatgaa 143  Q
    ||||||||||    
T  4189336 ttagaatgaa 4189327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 4185464 - 4185629
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| ||||||||| |||  ||||||||||||||||||| | |||| ||||||||| | ||| |||||| || ||| ||  |||||||||||||||| |    
T  4185464 tttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagt 4185563  T
Q  134 ttagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||  |||| |  | ||| ||||||||||||||  | ||| ||||||||||||||||||||    
T  4185564 ttagaatgaa--tttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 21834509 - 21834581
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  21834509 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaaaatgt 21834581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 4674701 - 4674810
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| ||||||||| |||  ||||||||||||||||||||| |||| ||||||||| | |||||||||| || ||| ||  |||| ||||||||||| |    
T  4674701 tttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagt 4674800  T
Q  134 ttagaatgaa 143  Q
    ||||||||||    
T  4674801 ttagaatgaa 4674810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 11185963 - 11185780
Alignment:
Q  42 ttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatg 141  Q
    |||||||||||| ||||||||| ||||||||||| |||||||| |||| || ||||  |||| || || | |  |||||||||||||           |     
T  11185963 ttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctggaa-----------tt 11185875  T
Q  142 aaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcga 237  Q
    |||||| ||| | ||| ||||||||||||||| | |||||||||| ||||||||| |||||||||||||||| |||| |||||| |||||||||||    
T  11185874 aaacttatgggattctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaacatagtgacttgtt-agattttgcga 11185780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 15894072 - 15894237
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || ||||||  || || |  |||  |||| |||||||||||  |    
T  15894072 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaaga-ct 15894170  T
Q  135 tagaatgaaa-cttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||    |||| | ||||||||||||||||||  | |||||||| ||||| |||||||||    
T  15894171 tagaatgaaagaacttgggattctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 18907609 - 18907549
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  18907609 cagagagcatgtcgaattctgtattttttacctttgagttgaaccttagatgtttttgagt 18907549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 21739641 - 21739713
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  21739641 cagagagcatgttgaattctgtttttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 21739713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 23019874 - 23019721
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| ||||||||||||||||||||| ||||||| | |||||| ||||||||||||  ||| ||  |||||||||||||   ||| |||||| || |    
T  23019874 agttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaatattttaagaatg-aatt 23019776  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||| | |   ||||||||||||||  | ||| |||||| || |||||||||||    
T  23019775 tttgggagttacacctgaactcgccatggcgagtagaggcccttgcctcgcgagt 23019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 31155039 - 31155137
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagat 132  Q
    ||||| ||||||||| |||  ||||||||||||||||||||| || | ||||||||| | || ||||||| || ||||||  |||||||||||||||||    
T  31155039 tttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 22080391 - 22080543
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| |||||||| ||||||||| || |||||||||||||||| |||| ||||||| |||| |   |||||||||||||   ||| |||| | ||||    
T  22080391 agttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacg-aact 22080489  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    | ||| | |   ||||||||||||||  | ||| ||||||||||||||||||||    
T  22080490 tatgggagttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16523022 - 16523086
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||| ||||    
T  16523022 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagcgcct 16523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 22429660 - 22429724
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||||| |||||||||    
T  22429660 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcttctgagtgcct 22429724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 22334529 - 22334588
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttagga 99  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || ||||||    
T  22334529 acttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattagga 22334588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 15041169 - 15041255
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttag 97  Q
    |||||||||||| ||||| |||| |||| |||||||||||  | |||||||| |||||||||||| || |||| |||||| ||||||    
T  15041169 cagagagcatgttgaattttgtaattttgacttttgagttataccttagatgtttttgagtgcctgaagatgtttaataaaggttag 15041255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 17804673 - 17804613
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  17804673 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 17804613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 25603027 - 25603188
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| || | | || ||||||||||| |||||||||||||||| ||||||  || || |  |||  |||| |||||||||||  |    
T  25603027 ttttaacttttgagttgaacctgaaacgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaaaga-ct 25603125  T
Q  135 tagaatgaaac-ttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
    |||||||||||   || | | |||||| ||||||| |||  | ||||||||||||||||||||    
T  25603126 tagaatgaaacaacttaggattctgacttgaactcaccatggcgagcagaggctctcgcctcg 25603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 1645181 - 1645121
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||| |||| |||||||    
T  1645181 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttatatgcctttgagt 1645121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 9481923 - 9481983
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| | |||||||||||| ||||||||| |||||||    
T  9481923 cagagagcatgtcgaattctgagtttttgagttttgagttgaaccttagatgcctttgagt 9481983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 18180989 - 18180925
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||||  ||  |||| |||||||||||||| |||||||| ||||||||||||    
T  18180989 cagagagcatgttgaatttcgtgattttgacttttgagttgaaccttagatgtttttgagtgcct 18180925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 20803182 - 20803242
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| ||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  20803182 cagagagcatgttgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 20803242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 25766798 - 25766858
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||| |||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  25766798 cagagagcatgtcaaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 25766858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 29096123 - 29096179
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgctttt 67  Q
    |||||||| ||||||||| |||| |||| |||| ||||||||| |||||||||||||    
T  29096123 cagagagcttgtcgaattttgtaattttgacttctgagttgaaccttagatgctttt 29096179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 20907611 - 20907669
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttga 69  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||    
T  20907611 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttga 20907669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 22439283 - 22439238
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||| |||||||||||||| |||||||| ||||||||||||    
T  22439283 tgtaattttgacttttgagttgaaccttagatgtttttgagtgcct 22439238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 25956263 - 25956316
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaat 88  Q
    |||| |||||| ||||||| |||||||  |||||||||||| ||||||||||||    
T  25956263 ttttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaat 25956316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 16741683 - 16741623
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||  || ||  ||||| |||||||||||||| ||||||||| |||||||    
T  16741683 cagagagcatgtcgttttctgagtttttgacttttgagttgaaccttagatgcctttgagt 16741623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 18180852 - 18180800
Alignment:
Q  148 ttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||| | || ||||||||  ||||||||| ||||||||||||||||    
T  18180852 ttggaaatctggcttgtactcgccatggagagcagatgctctcgcctcgcgag 18180800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 19668728 - 19668688
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||| || ||| ||||||||||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 19668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 19863456 - 19863416
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  19863456 ttttgacttttgagttgaaccttagatgtttttgagtgcct 19863416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 22405685 - 22405748
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||||  ||| |||  |||||||||||||| |||||||||||| ||||||||    
T  22405685 cagagagcatgttgaatttcgtaatttg-acttttgagttgaaccttagatgctttagagtgcct 22405748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 23657050 - 23657110
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  ||||||||||||||  ||||||||||||||||    
T  23657050 cagagagcatgttgattttcgtattttggacttttgagttgaactttagatgcttttgagt 23657110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 25641802 - 25641866
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||   ||| |||| |||  |||||||||||||| |||||||| ||||||||||||    
T  25641802 cagagagcatgtaagattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcct 25641866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 25641939 - 25641991
Alignment:
Q  148 ttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||| |||||| | |||||||||||| | ||||||| ||||||||||||||||    
T  25641939 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 35 - 258
Target Start/End: Original strand, 16241 - 16464
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| |  ||||||  |||||||||||||||||||    
T  16241 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattt 16340  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    | ||||||||| ||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  16341 tcgaatgaaacgtttggaaatctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttg 16440  T
Q  235 cgaactgtgtcgcacaagttgtta 258  Q
    ||| ||||||||||||||||||||    
T  16441 cgatctgtgtcgcacaagttgtta 16464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 3564006 - 3564229
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  3564006 ttttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 3564105  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3564106 tagaatgaa-cttttggaaatctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 3564204  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| || ||| |||| |||||||||    
T  3564205 cgacctttgttgcacgagttgttaa 3564229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 38227959 - 38227736
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  38227959 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 38227860  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||| | | ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  38227859 -agaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttg 38227761  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| || ||| |||| |||||||||    
T  38227760 cgacctttgttgcacgagttgttaa 38227736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 9509668 - 9509467
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  9509668 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 9509569  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9509568 tagaatgaaacttgtgggattctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-agattttg 9509470  T
Q  235 cga 237  Q
    |||    
T  9509469 cga 9509467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 255
Target Start/End: Original strand, 15143686 - 15143898
Alignment:
Q  42 ttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatg 141  Q
    |||||||||| | ||||||||| ||||||||||| |||||||||||||||| ||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  15143686 ttttgagttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatg 15143785  T
Q  142 aaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactg 241  Q
     ||||||||  | ||||||||| ||||||||  | ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||     
T  15143786 -aacttttgtgattctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctt 15143884  T
Q  242 tgtcgcacaagttg 255  Q
    ||| |||| |||||    
T  15143885 tgttgcacgagttg 15143898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 12699311 - 12699091
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || ||| |||||||||||||||||||     
T  12699311 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattg 12699212  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    | ||||||||||  ||| | ||||||||||||||||||| | |||||||||||||| ||||| |||||||||||||||| |||| |||||| || |||||    
T  12699211 ttgaatgaaactcgtgggattctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaaacaaagtgacttgtt-aggttttg 12699113  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  12699112 cgacctttgttgcacgagttgt 12699091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 16385873 - 16386090
Alignment:
Q  8 gatcagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattgg 107  Q
    ||||||||||||||    ||| |||| |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| ||     
T  16385873 gatcagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgt 16385972  T
Q  108 agaatggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgaccca 207  Q
    || |||  ||||||||||           |||| |||||| ||| | ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  16385973 aggatgagattgaacctg-----------gaattaaacttgtgggattctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgaccca 16386061  T
Q  208 gaaacagagtgccttgttaagattttgcga 237  Q
    ||||||||||| |||||| |||||||||||    
T  16386062 gaaacagagtgacttgtt-agattttgcga 16386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 17061602 - 17061771
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||||||| || ||||||  |||||||||||| ||||||    
T  17061602 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattt 17061701  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacc 205  Q
    |||||| |||| ||||  |||||||||||||||||| |  | ||| |||||||||||||||||||||||||    
T  17061702 tagaataaaac-tttgagaatctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacc 17061771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 44014653 - 44014489
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  44014653 ttttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 44014554  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||| || |||||  | |   ||||||||||||||  | ||| ||||||||||||||||||||    
T  44014553 tagaatg-aatttttgttagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 256
Target Start/End: Complemental strand, 40443860 - 40443648
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |  || |||  |||||||||||||      
T  40443860 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaa-- 40443763  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
       |||       |||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||| ||  |||    
T  40443762 ---tta-------acttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttatt-ggat 40443674  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  40443673 tttgcgacctttgttgcacgagttgt 40443648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 44116983 - 44116816
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||| |||||||||  |||| |||| ||||||| ||| |||||||||||||||| |||||||||| || ||||||  |||||||| ||||||| ||    
T  44116983 ttttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaaga-tt 44116885  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgac 204  Q
    ||||||||||| ||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  44116884 tagaatgaaac-tttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgac 44116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 27847482 - 27847695
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||| |  || |||  |||||||||||||      
T  27847482 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaa-- 27847579  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||| ||| | | ||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  27847580 ---------ttaaacttatgggattttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgtt-agat 27847669  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  27847670 tttgcgacctttgttgcacgagttgt 27847695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 28504938 - 28505106
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||||||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| |||    
T  28504938 tgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaa 28505037  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||  ||||||||||| ||| |  ||||||||| ||||||||||  | ||||||||||||||||||||||||    
T  28505038 ga-cttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 810771 - 810936
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| ||||| |||||||||| |||||||||||||||||||   |||||||||||||||| ||    
T  810771 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatt 810870  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||  |||  ||| | | ||||||||||||||  | ||| |||||||||||||||||||||    
T  810871 tagaatgaatttttgtgaactgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 15754527 - 15754689
Alignment:
Q  33 attttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagat 132  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||  | ||||||  |||||||||||||| |     
T  15754527 atttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaa-aa 15754625  T
Q  133 tttagaatg-aaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
     |||||||| |||||||||  ||||||||| ||||| ||||| | ||||| ||||||||||||||    
T  15754626 cttagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 9751192 - 9751355
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| || || |||   |||||||||||||||  |    
T  9751192 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaaaga-ct 9751290  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||| ||| ||||||||||||  | ||||||||||||||||||||||||    
T  9751291 tagaatgaaactttggagaatttga-ctgaactcgccatggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 18302657 - 18302494
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| |||||||||  |||||||||| ||||||||||||| |  |||||||||| || || |||  ||||||||||||||||  |    
T  18302657 ttttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaaaga-ct 18302559  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  18302558 tagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 39267288 - 39267447
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| |||| |||| ||||||||||| ||||||||||||| || |||||||||| || || |||  ||||||||||||||||  |    
T  39267288 ttttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 39267386  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
    |||||||||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||    
T  39267387 tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 12756359 - 12756523
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||||||| || ||||||  ||||||||||| |  ||||    
T  12756359 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attattt 12756457  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     |||||| ||||||| | || ||||||||||||| |||  | ||| |||||||||||||||||||||    
T  12756458 aagaatg-aactttttggaagctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagt 12756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 200
Target Start/End: Complemental strand, 34201266 - 34201099
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||| | | |||||| |  ||||||  |||||||||| ||||    
T  34201266 gtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctgtaaag 34201167  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |  ||||||||||| ||| |  ||||||| ||||||||||||  | ||||||||||||| ||||||||||    
T  34201166 a-cttagaatgaaaatttggagaatctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 2831948 - 2832110
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| || || |||  ||||||||| ||||||  |    
T  2831948 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaaga-ct 2832046  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||| |||||| |  ||||||| |||||||| |||  | ||||||||||||||||||||||||    
T  2832047 tagaatg-aactttggagaatctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 211
Target Start/End: Complemental strand, 26212469 - 26212299
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| |  ||||| |||| || || |||  |||||||||||||     
T  26212469 tgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctggaa- 26212371  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaa 211  Q
              |||||||| ||    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  26212370 ----------tgaaacttgtgaggttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 26212299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 11995696 - 11995768
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaaga 103  Q
    |||||||| |||||||||||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  11995696 gtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 17137682 - 17137754
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  17137682 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 17137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 10589386 - 10589316
Alignment:
Q  166 ctcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcga 237  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcga 10589316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 257
Target Start/End: Original strand, 12255454 - 12255654
Alignment:
Q  56 ttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaat 155  Q
    ||||||| |||||||||| | ||||||| |||||||| ||||||||||||  ||| ||  |||||||||||||   ||| ||||||||  |||||| | |    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaat-ttttgggagt 12255552  T
Q  156 ctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttg 255  Q
       |||||||||||||| || ||| |||||||||||||||||||||  |||||  ||||| ||| |  ||| |||||||||| || |||| ||| |||||    
T  12255553 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggattttgcgatctttgtcacacgagttg 12255652  T
Q  256 tt 257  Q
    ||    
T  12255653 tt 12255654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 12321361 - 12321433
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||    
T  12321361 cagagagcatgtcgaattctgtatttttgacttttgagttgaaccttagacgtttttgagtgcctaaagatgt 12321433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 9703767 - 9703700
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  9703767 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaa 9703700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 47832275 - 47832212
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||    
T  47832275 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggaga 47832212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 68225 - 68036
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| ||| ||| |||||||| || ||||||||||||| ||||||||||||||||| ||  |||||||||||||  ||||    
T  68225 ttttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaataattt 68126  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
     ||||  |||||| ||| | |   |  |||||||||||  | ||| ||||||||||||||||||||  | ||||  ||||| |||||||||    
T  68125 aagaa-caaacttgtgggagttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 68036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 11880753 - 11880672
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatg 92  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||| ||||||||||||||| |||| || |||||    
T  11880753 cagagagcatgtagaattctgtacttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatg 11880672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 10508701 - 10508765
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||||    
T  10508701 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 10508765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 12187514 - 12187442
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||| ||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  12187514 cagagaacatgttgaattctgtagttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 12187442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 2760628 - 2760549
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataa 90  Q
    |||||||||||| |||||  ||| |||| |||||||||||||| ||||||||||||||||||||| || |||| ||||||    
T  2760628 cagagagcatgttgaatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataa 2760549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 3272288 - 3272209
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataa 90  Q
    |||||||||||| |||||  ||| |||| |||||||||||||| ||||||||||||||||||||| || |||| ||||||    
T  3272288 cagagagcatgttgaatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataa 3272209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 15211928 - 15211857
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||||||||| ||||| |||| | || |||||||||||||| |||||||||||||||||||||||| ||||    
T  15211928 agagagcatgttgaattctgtactcttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 15211857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 18006120 - 18006045
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||| |||||||| ||||    
T  18006120 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatttgaga 18006045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 16056778 - 16056617
Alignment:
Q  64 ttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctg 163  Q
    ||||| || ||| ||||||| ||||||||  |||||||||||  ||| ||  |||||||||||||   ||| |||||| |  |||||| |||   |||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggat-ttttgggaattacacctg 16056680  T
Q  164 aactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||| || ||| ||||||||||||||||||||| ||||||  ||||| ||||||||||    
T  16056679 aactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgtta 16056617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 14430379 - 14430315
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| ||||||||||| || |||||||||||||||||||||    
T  14430379 cagagagcatgttgaattctgtaattttgacttttgagttaaaccttagatgcttttgagtgcct 14430315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 15581168 - 15581108
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||||||||||||||||    
T  15581168 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcttttgagt 15581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 16583709 - 16583650
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||||||||  ||||| |||||||||||||| ||||||||| |||||||    
T  16583709 agagagcatgtcgaattatgagtttttgacttttgagttgaaccttagatgcctttgagt 16583650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 201
Target Start/End: Original strand, 16219370 - 16219523
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| |||||||| ||||||||| |||||| ||| |||||||| ||||||||||||  ||| ||  |||||||||||||   ||| |||||| || |    
T  16219370 agttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatg-aatt 16219468  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||| | |   || |||||||||||  | ||| |||||| ||||||||||||||    
T  16219469 tttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagt 16219523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 16324473 - 16324392
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||| |||  ||| |||||||||| | |||||||||||||||| ||||||||||||||||  ||  |||||||||||||    
T  16324473 agttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaa 16324392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 11313124 - 11313064
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  11313124 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 11313064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 12318603 - 12318543
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| ||||||||||||||  ||||||||||||||||    
T  12318603 cagagagcatgtcgaattctgagtttttgacttttgagttgaacattagatgcttttgagt 12318543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 13635099 - 13635159
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  13635099 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 13635159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 15604902 - 15604962
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||   |||| |||||||||||||| |||||||||||||||||    
T  15604902 cagagagcatgtcgaattctgagcttttgacttttgagttgaaccttagatgcttttgagt 15604962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 26292871 - 26292811
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  26292871 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 26292811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 42205590 - 42205530
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||| ||||||||| | || |||| |||||||||||||| |||||||||||||||||    
T  42205590 cagagagcttgtcgaattttataattttgacttttgagttgaaccttagatgcttttgagt 42205530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 226
Target Start/End: Complemental strand, 22073375 - 22073205
Alignment:
Q  55 cttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaa 154  Q
    |||||| | |||||||||||| ||||||| |||||||| |||| |||||||  ||||||  ||||||||| |||   ||| ||||||  | |||||| |     
T  22073375 cttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatg-gatttttgggag 22073277  T
Q  155 tctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    |   ||||||||||||||  | ||| |||||| |||||||||||||| ||||||  ||||| ||| ||||||    
T  22073276 ttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttgtta 22073205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 8917902 - 8917842
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||   |||||  ||||| |||||||||||||| |||||||||||||||||    
T  8917902 cagagagcatgtctttttatgagtttttgacttttgagttgaaccttagatgcttttgagt 8917842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 17701275 - 17701335
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||| |||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  17701275 cagagagcatgtcaaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 17701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 2279772 - 2279830
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    |||||| | ||||||| |||||||||||| ||||||  |||||||| ||||||||||||    
T  2279772 agttgatatttagatgattttgagtgcctgaacatgcataataatgattaggaaagatt 2279830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 9389332 - 9389430
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||| |||| |||||| ||||||| ||| |||| ||||||||| ||  || ||| |||| ||| ||||||||||||| ||| ||  |||||||||||||    
T  9389332 tgtacttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaa 9389430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 13462214 - 13462177
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  13462214 tttttgacttttgagttgaaccttagatgcttttgagt 13462177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 24054950 - 24054905
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||| |||||||||||||| |||||||| ||||||||||||    
T  24054950 tgtagttttgacttttgagttgaaccttagatgtttttgagtgcct 24054905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 9445788 - 9445848
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||| ||||    
T  9445788 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgctttcgagt 9445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 9593694 - 9593642
Alignment:
Q  148 ttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||| | || |||||||| || ||||||| ||||||||||||||||    
T  9593694 ttggaaatctggcttgtactcgccatagcgagcagatgctctcgcctcgcgag 9593642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 9644657 - 9644605
Alignment:
Q  148 ttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||| | || |||||||| || ||||||| ||||||||||||||||    
T  9644657 ttggaaatctggcttgtactcgccatagcgagcagatgctctcgcctcgcgag 9644605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 16724261 - 16724321
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||| |||| |   ||||| |||||||||||||| ||||||||| |||||||    
T  16724261 cagagagcatgtcaaattctaagtttttgacttttgagttgaaccttagatgcctttgagt 16724321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 18154479 - 18154519
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  18154479 ttttgacttttgagttgaaccttagatgtttttgagtgcct 18154519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 19649127 - 19649167
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  19649127 ttttgacttttgagttgaaccttagatgtttttgagtgcct 19649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 5e-74; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 9078431 - 9078208
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||   ||| |||||||||||||||| |||||||||||||||| |||||||| | || ||||||  |||||||||||||||||||    
T  9078431 ttttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagattt 9078332  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||| ||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9078331 -agaatgaaaccttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 9078233  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| |||||||||||||||||||||    
T  9078232 cgatctgtgtcgcacaagttgttaa 9078208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 1096946 - 1096723
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||||| |||||||||||     
T  1096946 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattg 1096847  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||| |||  ||||||    
T  1096846 cagaatgaa-cttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttg 1096748  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| || ||||||||||||||||||    
T  1096747 cgatctctgtcgcacaagttgttaa 1096723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 21985789 - 21986010
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  21985789 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 21985888  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||||||| ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||||    
T  21985889 -agaatgaaacttttggaattctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttg 21985987  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  21985988 cgacctttgttgcacgagttgtt 21986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 24529700 - 24529498
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||| ||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||| ||     
T  24529700 ttttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttg 24529601  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||    
T  24529600 tagaatgaaacttttggaattctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttg 24529501  T
Q  235 cga 237  Q
    |||    
T  24529500 cga 24529498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 25422011 - 25421790
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||| ||||| ||||||||||    || |||  |||| ||||||||||||||    
T  25422011 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagattt 25421912  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     ||||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  25421911 -agaatgaaactttcggaaatctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttg 25421813  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  25421812 cgacctttgttgcacgagttgtt 25421790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 13095973 - 13095772
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||  |||| |||||||||||||||| |||||||||| || || |||  |||| ||||||||||||||    
T  13095973 ttttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattt 13095874  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||| ||| | ||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||    
T  13095873 -agaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttg 13095775  T
Q  235 cga 237  Q
    |||    
T  13095774 cga 13095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 25431873 - 25431672
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| || ||||| |||||||||| |  || |||  |||| ||||||||||||||    
T  25431873 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagattt 25431774  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     ||||||||||||||||||||||||| |||||||||||| | ||| |||||||||| ||||||||||||||||||||  ||||||||||||| |||||||    
T  25431773 -agaatgaaacttttggaaatctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttg 25431675  T
Q  235 cga 237  Q
    |||    
T  25431674 cga 25431672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 35 - 256
Target Start/End: Original strand, 23390138 - 23390358
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  23390138 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 23390237  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||  | ||| ||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||    
T  23390238 tagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtt-agattttg 23390336  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
     || || ||| |||| ||||||    
T  23390337 tgacctttgttgcacgagttgt 23390358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 24494047 - 24493826
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| ||||||||||  |||| |||||||||||||||| |||||||||| || || |||  |||||||||||||||||||    
T  24494047 ttttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattt 24493948  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||| | | ||||||||||||||||||| | ||||||||||| |||||||| |||| ||||| |||||||||| ||||||| | |||||    
T  24493947 -agaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgttaggtttttg 24493849  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  24493848 cgacctttgttgcacgagttgtt 24493826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 13025782 - 13025588
Alignment:
Q  42 ttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatg 141  Q
    |||||||||||  ||||||| |||||||  |||| |||||||||||||||| |||||||||| || || |||  |||| |||||||||||||| ||||||    
T  13025782 ttttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattt-agaatg 13025684  T
Q  142 aaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcga 237  Q
    |||||| ||| | ||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||||||||||| ||||||| | ||||||||    
T  13025683 aaacttgtgggattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcga 13025588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 207
Target Start/End: Original strand, 11580887 - 11581058
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||| |||||||||||||| ||||||| |||||||| |||||||||| || ||||||  |||||||||||| ||||||    
T  11580887 ttttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattt 11580986  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgaccca 207  Q
    |||||| |||| ||||  ||||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  11580987 tagaataaaac-tttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccca 11581058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 21292619 - 21292832
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||  |||||||||| || || |||  |||||||||||||      
T  21292619 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaa-- 21292716  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||| || ||||    
T  21292717 ---------ttaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgactt-tttagat 21292806  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  21292807 tttgcgacctttgttgcacgagttgt 21292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 36154470 - 36154639
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||| ||||||  ||||||||||||||||||| | |||||||||||||||| |||||||||| || ||| ||  |||||||||||| ||||||    
T  36154470 ttttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattt 36154569  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacc 205  Q
    |||||| |||| ||||  ||||||||||||||||||||  | ||| |||||||||||||||||||||||||    
T  36154570 tagaataaaac-tttgagaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacc 36154639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 21566023 - 21565863
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  21566023 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 21565924  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
    ||||||| || ||| |  |||   ||||||||||||||  | ||||||||||||||||||||    
T  21565923 tagaatg-aattttcgtgaattgtacctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 19660474 - 19660643
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| ||  |||||  ||| ||||||||||    
T  19660474 tgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaaa 19660573  T
Q  130 gattttagaatgaaacttttgga-aatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||  |||||||||||  |||||| ||||| ||| ||||||||||  | ||||||||||||||||||||||||    
T  19660574 ga-cttagaatgaaaactttggagaatctaacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 22119811 - 22119998
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    |||||||||||   |||| |||  |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| || ||     
T  22119811 cagagagcatgcaaaattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22119910  T
Q  111 atggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||  ||||||||||||||||  ||||||||||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  22119911 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 22959175 - 22959339
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||| ||| ||    
T  22959175 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 22959274  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||  |||| |  | ||| ||||||||||||||  | ||| ||||||||||||||||||||    
T  22959275 tagaatgaa--tttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 22075487 - 22075306
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||| || || ||| || ||||||||             
T  22075487 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctg--------- 22075397  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccag-aaacagagtgccttgtta 226  Q
      ||||||||||| ||    ||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  22075396 --gaatgaaacttgtgaggttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaacagagtgacttgtta 22075306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 8286494 - 8286685
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| |||||||||||||| ||||||||| ||||||||||  |||||||||||||||| ||| |||||| || || |||  |||||||||||||         
T  8286494 tttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctggaa----- 8286588  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
          |||||||| ||| | |||||||| |||| ||||  | |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  8286589 ------tgaaacttgtgggattctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agatttt 8286681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 19669379 - 19669219
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| ||||||||| || |||||||||||||||| |||||||||||||| |||||  ||||||| |||||||| ||    
T  19669379 ttttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactt 19669280  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctc 195  Q
    |||||||||  |||||  |||   ||||||||||||||  | | | |||||||||||||||    
T  19669279 tagaatgaattttttgtgaattgtacctgaactcgccatggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 24766984 - 24767142
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || ||| |||||| || || |||  |||||| |||||||||  ||||||    
T  24766984 acttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaaga-cttagaa 24767082  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||| |  ||||||| ||||||||| ||  | ||||||||||||||||||||||||    
T  24767083 tgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 21871213 - 21871377
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||| || ||||| |||||||||| || || |||  ||||||||||||||||||     
T  21871213 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagatta 21871312  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    | |||||  |||||||  | ||||||||| ||||||||  | ||| |||||||| || ||||||||    
T  21871313 tggaatg-gacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 21875493 - 21875657
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||| || ||||| |||||||||| || || |||  ||||||||||||||||||     
T  21875493 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagatta 21875592  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    | |||||  |||||||  | ||||||||| ||||||||  | ||| |||||||| || ||||||||    
T  21875593 tggaatg-gacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21875657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 224
Target Start/End: Original strand, 22107022 - 22107204
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| ||||||||||||||  |||||||| ||||||||||| ||||||||||||| || |||||||||| || || | |  |||||||||| ||      
T  22107022 gtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctgaaa-- 22107119  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 224  Q
             | |||||| ||| | |||||||||||||| |||  | |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  22107120 ---------ttaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaaatagagtgccttgt 22107204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 257
Target Start/End: Complemental strand, 22144508 - 22144308
Alignment:
Q  56 ttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaat 155  Q
    ||||||| |||||||||||| ||||||| ||| |||| ||||||||||||  ||| ||  |||||||||||||  |||| |||||| |  |||||| | |    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggat-ttttgggagt 22144410  T
Q  156 ctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttg 255  Q
       |||||||||||||| || ||| |||||||||||||||||||||  |||||  ||||| ||| |  ||| |||||||||| || |||||||| |||||    
T  22144409 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttg 22144310  T
Q  256 tt 257  Q
    ||    
T  22144309 tt 22144308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 14079648 - 14079576
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||||||||| ||||||||||| || |||||||| ||||||||||||||| ||||    
T  14079648 cagagagcatgtagaattctgtatttttgacttttgagttcaaccttagatgtttttgagtgcctaaatatgt 14079576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 17918781 - 17918845
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||| ||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  17918781 cagagagcttgtcgaattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 18769623 - 18769695
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||| ||||| ||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||    
T  18769623 cagagaacatgttgaattctgtatttttgacttttaagttgaaccttagatgcttttgagtgcctaaagatgt 18769695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 21887324 - 21887252
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  21887324 cagagagcatgttgaattctgtacttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 21887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 22032816 - 22032744
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||| || || ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  22032816 cagagaacacgttgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 22032744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 21366286 - 21366349
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  21366286 agagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 21366349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 31342602 - 31342539
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||| ||| ||||| |||||||||||||| |||||||||||||||||||||    
T  31342602 agagagcatgtcaaattctgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 31342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 225
Target Start/End: Original strand, 21329149 - 21329326
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| |||||||| |||||||||||| |||||||||| | ||| |||| |||||||  ||| ||  |||||||||||||  ||||  ||||| || |    
T  21329149 agttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataatttaggaatg-aatt 21329247  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
    ||||| | |   || ||||||||||| || ||| ||||||||||||||||||| | ||| ||  ||||| |||||||||    
T  21329248 tttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtt 21329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 23512604 - 23512535
Alignment:
Q  14 agagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||||||| ||||| ||||||||  |||||||||||||| |||||||| ||||||||||||||| ||||    
T  23512604 agagcatgttgaattctgtattttcgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 23512535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 20806047 - 20805983
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||| ||||||||||||||||    
T  20806047 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttatatgcttttgagtgcct 20805983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 23201869 - 23201805
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||| ||||||||||||    
T  23201869 cagagagcatgtagaattctgtacttttgacttttgagttgaaccttagatgtttttgagtgcct 23201805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 23572559 - 23572510
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttaga 60  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  23572559 cagagagcatgtcgaattctgtatttttgacttttgagttgaaccttaga 23572510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 23500964 - 23501028
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||  | |||||||||||||| |||||||| ||||||||||||    
T  23500964 cagagagcatgtagaattctgtattcctaacttttgagttgaaccttagatgtttttgagtgcct 23501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 21498671 - 21498752
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||| ||| |||| |||||||||||| ||||||| |||||||  |||||| |||||| ||| ||  |||||||||||||    
T  21498671 agttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaa 21498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  159 acctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccag 208  Q
    |||||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 1858606 - 1858666
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| |||||  ||| |||  |||||||||||||| |||||||||||||||||    
T  1858606 cagagagcatgttgaatttcgtaatttggacttttgagttgaaccttagatgcttttgagt 1858666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 12028195 - 12028255
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  12028195 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttgagt 12028255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  161 ctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22760141 - 22760081
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  22760141 cagagagcatgttgatttccgtattttggacttttgagttgaaccttagatgcttttgagt 22760081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 24222364 - 24222304
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  24222364 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttgagt 24222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 37724403 - 37724340
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||   ||| |||| |||| |||||||||||||| |||||||| ||||||||||||    
T  37724403 agagagcatgtaagattctgtaattttgacttttgagttgaaccttagatgtttttgagtgcct 37724340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 17410923 - 17410874
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttaga 60  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||    
T  17410923 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttaga 17410874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 16674628 - 16674568
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||   |||||  ||||| |||||||||||||| ||||||||| |||||||    
T  16674628 cagagagcatgtcattttatgagtttttgacttttgagttgaaccttagatgcctttgagt 16674568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 26742376 - 26742436
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||  |||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  26742376 cagagagcatgtaaaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 26742436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 34 - 257
Target Start/End: Original strand, 16856 - 17078
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| ||||| |||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  ||||||||||||||||||    
T  16856 tttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatt 16955  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
    | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||    
T  16956 t-agaatgaaacttttggaattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggatttt 17054  T
Q  234 gcgaactgtgtcgcacaagttgtt 257  Q
    |||| || ||| |||| |||||||    
T  17055 gcgacctttgttgcacgagttgtt 17078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 79009 - 79096
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctgga 127  Q
    |||||||||||||| ||||||||||||||||||| | ||||||| |||||||| ||||||| || || ||||||  ||||||||||||    
T  79009 acttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 13696 - 13763
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||| | |||||||||||||||    
T  13696 cagagagcatgtagaattttgtatttttgacttttgagttgaaccttagaggtttttgagtgcctaaa 13763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 5e-71; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 23660501 - 23660311
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  23660501 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 23660402  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23660401 tagaatgaaacttttgg-aatctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgtta 23660311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 27754054 - 27753853
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  27754054 ttttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 27753955  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  27753954 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgtt-agattttg 27753856  T
Q  235 cga 237  Q
    |||    
T  27753855 cga 27753853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 298457 - 298677
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| |  || |||  |||||||||||||||||||    
T  298457 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagattt 298556  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||| ||| | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  298557 -agaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttg 298654  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  298655 cgacctttgttgcacgagttgtt 298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 35 - 256
Target Start/End: Original strand, 32451571 - 32451791
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||| ||| || || |||  ||||||| ||||||||||     
T  32451571 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattg 32451670  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  32451671 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttg 32451769  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  32451770 cgacctttgttgcacgagttgt 32451791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 22730875 - 22731066
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  22730875 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 22730974  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||| ||| | ||||||||||||||||||| | ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  22730975 tagaatgaaacttgtgggattctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgtta 22731066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 22737822 - 22738043
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||| |||||||||| |||||||||| || || |||  ||||||||| ||||||||     
T  22737822 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattg 22737921  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  22737922 tagaatgaaacttgtgggattctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgtt-aggttttg 22738020  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  22738021 cgacctttgttgcacgagttgtt 22738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 55 - 257
Target Start/End: Complemental strand, 23076899 - 23076700
Alignment:
Q  55 cttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaa 154  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||| || || |||  |||| |||||||||||||| ||||||||||||| ||||     
T  23076899 cttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaagattt-agaatgaaacttt-ggaat 23076802  T
Q  155 tctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagtt 254  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||| || |||||||| || ||| |||| ||||    
T  23076801 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgtt-aggttttgcgacctttgttgcacgagtt 23076703  T

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Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 40 - 257
Target Start/End: Complemental strand, 22337589 - 22337373
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||  ||||||||||||||||||  | |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||| ||||    
T  22337589 acttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattt-agaa 22337491  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaac 239  Q
    |||||||||| ||  ||||||||||| ||||||| | ||| |||||||||||||||||||||||||||||||||||| | ||||||| | ||||| || |    
T  22337490 tgaaactttttgagttctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacc 22337391  T
Q  240 tgtgtcgcacaagttgtt 257  Q
    | ||| |||| |||||||    
T  22337390 tttgttgcacgagttgtt 22337373  T

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Target: chr2; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 22133859 - 22134020
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||| | |||| ||    
T  22133859 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactt 22133958  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcga 199  Q
    |||||||||  |||||  || |||| ||||||||||||  | |||||||||||||||||||||||    
T  22133959 tagaatgaa--ttttgtgaa-ctgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

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Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 20309577 - 20309383
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||  | ||||||||||||| |||||||||| || || |||  |||||||||||||      
T  20309577 gtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-- 20309480  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||| ||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||    
T  20309479 ---------ttaaacttgtgggattctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtt-agat 20309390  T

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Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 23071614 - 23071768
Alignment:
Q  44 ttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaa 143  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| |||||  ||||||||||    
T  23071614 ttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaa 23071712  T
Q  144 acttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    | ||| |  ||||||||| ||||||||||  | ||||||||||||||||||||||||    
T  23071713 aatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 23286329 - 23286139
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| |||||||||||||||||| || |||||||||||||||| |||||||||| || || |||  ||||||| |||||          
T  23286329 ttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaa------ 23286236  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         ||||| || ||  | | ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  23286235 -----tgaaaattgtgagattatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-agattttg 23286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 37765 - 37978
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||||   || || |||  ||||||||||         
T  37765 gtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctg----- 37859  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
          |||| |||||| ||  | ||| ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||| |||||| |||     
T  37860 ------gaattaaacttgtgagattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgtt-agac 37952  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  37953 tttgcgacctttgttgcacgagttgt 37978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 28406436 - 28406297
Alignment:
Q  57 tagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaatc 156  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  |||||||||| |||||||||||||| ||| |||  |||  |    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaa--c 28406339  T
Q  157 tg-acctgaactcgccacagagagcagaggctctcgcctcgc 197  Q
    || ||||||||||||||  | ||| |||||||||||||||||    
T  28406338 tgaacctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 28291940 - 28292022
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatg 113  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||| || ||||||    
T  28291940 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatg 28292022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 23654052 - 23654145
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||| |||||||||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||    
T  23654052 ttttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 23654145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 24658139 - 24658059
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatg 92  Q
    ||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||| || |||||    
T  24658139 agagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatg 24658059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 25176313 - 25176228
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||| ||| ||||||||| ||||||| ||  |||||||||||||    
T  25176313 tttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaa 25176228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 45677774 - 45677841
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  45677774 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaa 45677841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 25963336 - 25963400
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  25963336 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 25963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 21917935 - 21917999
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| ||||||||||| || |||||||||||||||||||||    
T  21917935 cagagagcatgttgaattctgtaattttgacttttgagtttaaccttagatgcttttgagtgcct 21917999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24674076 - 24674012
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| ||| |||||||    
T  24674076 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcctttaagtgcct 24674012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 37525164 - 37525100
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| ||||||||||| || |||||||||||||||||||||    
T  37525164 cagagagcatgttgaattctgtaattttgacttttgagttaaaccttagatgcttttgagtgcct 37525100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 23708383 - 23708481
Alignment:
Q  159 acctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgtt 257  Q
    |||||||||||||| || ||| |||||||||||||| |||||| ||||||  ||||| ||| |  ||| |||||||||| || |||||||| |||||||    
T  23708383 acctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgtt 23708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 40621827 - 40621893
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaa 77  Q
    |||||||||||| ||||| | ||||||| |||||||||||||| |||||||| ||||||||| ||||    
T  40621827 cagagagcatgttgaattctatatttttgacttttgagttgaaccttagatgtttttgagtgtctaa 40621893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 24654967 - 24655032
Alignment:
Q  11 cagagagcatgtcgaattatg-tattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||| |  ||||||  |||||||||||||| |||||||||||||||||||||    
T  24654967 cagagagcatgtcgaattttcctattttggacttttgagttgaaccttagatgcttttgagtgcct 24655032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 21327196 - 21327256
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||| | ||||||||| || || |||||||| |||||||||||||||||    
T  21327196 cagagagcatgtcgaaatctgtatttttgaccttcgagttgaaccttagatgcttttgagt 21327256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 22798745 - 22798817
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||| |||||||| |||| | || |||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  22798745 cagaaagcatgtctaattctatacttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 22798817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 22811553 - 22811617
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||  |||| |||| |||| |||||||||||||| ||||| |||||||||||||||    
T  22811553 cagagagcatgttaaattttgtaattttgacttttgagttgaaccttaggtgcttttgagtgcct 22811617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 24735879 - 24735827
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgc 63  Q
    |||||||||||||||||||||  ||||| |||||||||||||| |||||||||    
T  24735879 cagagagcatgtcgaattatgagtttttgacttttgagttgaaccttagatgc 24735827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 23654188 - 23654248
Alignment:
Q  195 cgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgt 256  Q
    |||||||||||||||||||||||| |||||| ||||||||||| || ||| |||| ||||||    
T  23654188 cgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgt 23654248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 21318265 - 21318325
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||| ||||||||| | ||||||||| || || |||||||| |||||||||||||||||    
T  21318265 cagagatcatgtcgaaatctgtatttttgaccttcgagttgaaccttagatgcttttgagt 21318325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 22740579 - 22740643
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||   |||||||| |||  |||||||||||||| |||||||| ||||||||||||    
T  22740579 cagagagcatgtaagattatgtagtttggacttttgagttgaaccttagatgtttttgagtgcct 22740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 22758334 - 22758398
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||   |||||||| |||  |||||||||||||| |||||||| ||||||||||||    
T  22758334 cagagagcatgtaagattatgtagtttggacttttgagttgaaccttagatgtttttgagtgcct 22758398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 24175287 - 24175227
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  24175287 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttgagt 24175227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 27263704 - 27263667
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  27263704 tttttgacttttgagttgaaccttagatgcttttgagt 27263667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 10327333 - 10327273
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||  || |||||||||    
T  10327333 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttccattcttttgagt 10327273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 22740716 - 22740768
Alignment:
Q  148 ttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||| |||||| | |||||||||||| | ||||||| ||||||||||||||||    
T  22740716 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 24870347 - 24870307
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||  |||||||||||||| |||||||||||||||||    
T  24870347 gtattttggacttttgagttgaaccttagatgcttttgagt 24870307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 40428952 - 40428892
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  || ||||  |||||||||||||| |||||||||||||||||    
T  40428952 cagagagcatgttgattttcgtgttttggacttttgagttgaaccttagatgcttttgagt 40428892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 50209856 - 50210076
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| |||| ||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  50209856 ttttgacttttgagttgat-cttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 50209954  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50209955 -agaatgaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 50210053  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  50210054 cgacctttgttgcacgagttgtt 50210076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 34510259 - 34510038
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  34510259 ttttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 34510160  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| | ||||| | |||||    
T  34510159 tagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgttaggtttttg 34510061  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  34510060 cgacctttgttgcacgagttgtt 34510038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 22532748 - 22532547
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||| ||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||| ||||     
T  22532748 ttttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattg 22532649  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  22532648 tagaatgaa-cttttggaaatctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttg 22532550  T
Q  235 cga 237  Q
    |||    
T  22532549 cga 22532547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 433486 - 433314
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||||| || |||||||||| ||||| |||||||||| || ||||||  |||||||||||||||||||    
T  433486 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattt 433387  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccag 208  Q
    ||||||||||| ||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  433386 tagaatgaaac-tttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 433314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 22354214 - 22354435
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| |||| |||||||||||||| | ||||||||| |||||| |||||||| |  | || |||  |||||||||||| |||||     
T  22354214 ttttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattg 22354313  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||| |||||| || |||||    
T  22354314 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgtt-aggttttg 22354412  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  22354413 cgacctttgttgcacgagttgtt 22354435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 40 - 256
Target Start/End: Original strand, 27250387 - 27250591
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||| ||||||||||           |||    
T  27250387 acttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctg-----------gaa 27250475  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaac 239  Q
    |||||| | ||| | |||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||||||| |    
T  27250476 tgaaacctgtgggattctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaacagagtcccttgtt-atattttgcgacc 27250574  T
Q  240 tgtgtcgcacaagttgt 256  Q
    | ||| |||| ||||||    
T  27250575 tttgttgcacgagttgt 27250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 223
Target Start/End: Complemental strand, 33681488 - 33681301
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||| ||| || ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  33681488 ttttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 33681389  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 223  Q
    ||||||| || |||||  | |   ||||||||||||||  | ||||||||||||||||||||||| | ||||||  |||||||||||||    
T  33681388 tagaatg-aatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 226
Target Start/End: Complemental strand, 20135671 - 20135476
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| ||||||||||| |  ||||||||||||||||||| | |||||||||||||||| |||||||||| || || |||  |||| |||||||||    
T  20135671 tgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaa 20135572  T
Q  130 gattttagaatgaaac-ttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||  |||||||||||| |||||||| ||||||| ||||||||||  | ||||||| |||||| |||||||||| |||||||||||||||| |||||||    
T  20135571 ga-cttagaatgaaacattttggaattctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccagaaacagagtgacttgtta 20135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 201
Target Start/End: Complemental strand, 21754518 - 21754350
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |  ||||||||||| |||    
T  21754518 gtatttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaag 21754419  T
Q  131 attttagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    | |||||||||||  |||||  || ||| ||||||||||||||  | |||||||||||||||||||||||||    
T  21754418 actttagaatgaa--ttttgtgaa-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 257
Target Start/End: Original strand, 20846867 - 20847082
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| || ||||||||||  ||||||||||||||||||||| |||||||||||||||| ||||| |||| || || |||  |||||||||||||     
T  20846867 tgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa- 20846965  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaaga 229  Q
              |||||||| ||    | ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||| |||||| |||    
T  20846966 ----------tgaaacttgtgaggttttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttgtt-aga 20847054  T
Q  230 ttttgcgaactgtgtcgcacaagttgtt 257  Q
    |||||||| || ||| |||| |||||||    
T  20847055 ttttgcgacctttgttgcacgagttgtt 20847082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 52927623 - 52927786
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||    
T  52927623 ttttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattt 52927722  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcga 199  Q
    | ||||| || ||||  || |  |||||||||||||||  | ||| |||||| ||||||||||||    
T  52927723 tggaatg-aattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcga 52927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 237
Target Start/End: Original strand, 38801041 - 38801234
Alignment:
Q  32 tattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaaga 131  Q
    ||||||| ||||||||||||||  |||||||  ||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||       
T  38801041 tatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaa--- 38801137  T
Q  132 ttttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatt 231  Q
            |  ||||| ||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  38801138 --------ttgaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-agatt 38801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 257
Target Start/End: Complemental strand, 21027153 - 21026938
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| || ||||||||||  ||||||||||||||||||| | |||||||||||||||| ||||| |||| || || |||  |||||||||||||     
T  21027153 tgtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa- 21027055  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaaga 229  Q
              |||||||| ||    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||| |||    
T  21027054 ----------tgaaacttgtgaggttctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtt-aga 21026966  T
Q  230 ttttgcgaactgtgtcgcacaagttgtt 257  Q
    |||||||| || ||| |||| |||||||    
T  21026965 ttttgcgacctttgttgcacgagttgtt 21026938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 22355827 - 22355998
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||             
T  22355827 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg--------- 22355917  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtg 218  Q
      |||||||| || ||| | ||||||||||||||||||| | ||||||||||| |||| |||||||||||| ||||||||||||    
T  22355918 --gaatgaaatttgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtg 22355998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 22357513 - 22357684
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||             
T  22357513 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg--------- 22357603  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtg 218  Q
      |||||||| || ||| | ||||||||||||||||||| | ||||||||||| |||| |||||||||||| ||||||||||||    
T  22357604 --gaatgaaatttgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtg 22357684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 22238108 - 22238000
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  22238108 ttttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattt 22238009  T
Q  135 tagaatgaa 143  Q
    | |||||||    
T  22238008 tggaatgaa 22238000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 20248756 - 20248592
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  | |||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||  |||||||||||| ||| ||    
T  20248756 ttttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactt 20248657  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||  |||| |  | ||| ||||||||||||||  | ||| ||||||| ||||||||||||    
T  20248656 tagaatgaa--tttttgtgaactgaacctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 20919072 - 20918917
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatga 142  Q
    ||||||||||  |||| |||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| |||||  |||||||      
T  20919072 tttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaattt 20918974  T
Q  143 aacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    || ||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  20918973 aaatttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18181743 - 18181826
Alignment:
Q  14 agagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttag 97  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||| || ||||| ||||    
T  18181743 agagcatgtcgaattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgattag 18181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 22921517 - 22921602
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| ||  |||||||| ||||    
T  22921517 tttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaa 22921602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 22432402 - 22432474
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| |||||| ||| |||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  22432402 cagagagcatgttgaattaagtaattttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 22432474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 22830997 - 22831069
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  22830997 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 22831069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 42864830 - 42864897
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  42864830 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaa 42864897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 21301180 - 21301245
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaa 100  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||    
T  21301180 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 21787665 - 21787740
Alignment:
Q  15 gagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataa 90  Q
    |||||||| ||||| ||||||||| |||| ||||||||| |||||||| ||||||||||||||| |||| ||||||    
T  21787665 gagcatgttgaattctgtatttttgacttgtgagttgaaccttagatgtttttgagtgcctaaagatgtttaataa 21787740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 21023138 - 21023066
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||| ||||||||||||||| ||| ||||    
T  21023138 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttaaatgcttttgagtgccaaaagatgt 21023066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 24782730 - 24782790
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||||||||||||||||    
T  24782730 cagagagcatgtcgaattttgagtttttaacttttgagttgaaccttagatgcttttgagt 24782790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 3472545 - 3472607
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgc 73  Q
    |||||||||||| |||||  ||| |||| |||||||||||||| |||||||||||||||||||    
T  3472545 cagagagcatgttgaatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgc 3472607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 20091113 - 20091281
Alignment:
Q  32 tattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaaga 131  Q
    ||||||| ||||||||||| || ||||||||| ||||| ||||| ||||||||||||| || ||||||  || || |  |||  |||| ||||| |||||    
T  20091113 tatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaaga 20091212  T
Q  132 ttttagaatgaaac-ttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
      ||||||||||||   |||| | ||||||||||||||||||  | ||||||| | |||| |||||||||    
T  20091213 -cttagaatgaaacaacttgggattctgacctgaactcgccatggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 6152347 - 6152283
Alignment:
Q  19 atgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||| ||||| ||||||||| || ||||||||||| ||||| |||||||||||||||||| ||||    
T  6152347 atgttgaattctgtatttttgacctttgagttgaaccttagttgcttttgagtgcctaaagatgt 6152283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 43697839 - 43697769
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    |||| |||||| ||||||| |||||||| |||||||||||| |||||||||| | ||| |||| |||||||    
T  43697839 ttttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagatt 43697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 46975920 - 46975883
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46975920 ttttttacttttgagttgaaccttagatgcttttgagt 46975883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 8761252 - 8761316
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| | |||  ||| |||  |||||||||||||| |||||||||||||||||||||    
T  8761252 cagagagcatgttggatttcgtaatttggacttttgagttgaaccttagatgcttttgagtgcct 8761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 21305790 - 21305730
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||| || ||  ||||| |||||||||||||| ||||||||| |||||||    
T  21305790 cagagagcatgtcgagttctgagtttttgacttttgagttgaaccttagatgcctttgagt 21305730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 23818929 - 23818989
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||   |||||  ||||| |||||||||||||| |||||||||||||||||    
T  23818929 cagagagcatgtcattttatgagtttttgacttttgagttgaaccttagatgcttttgagt 23818989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 36818938 - 36818998
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||| |||| |||||||    
T  36818938 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttaaatgcctttgagt 36818998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 20228440 - 20228499
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||||| ||  ||||| ||||||||| |||| ||||||||| |||||||    
T  20228440 agagagcatgtcgaattctgagtttttgacttttgagatgaaccttagatgcctttgagt 20228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 21162208 - 21162117
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctg 125  Q
    ||||| ||||||||| |||  |||| |||||||||||||||| || | ||||||||| | || ||||||| || ||||||  ||||||||||    
T  21162208 tttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 26065295 - 26065196
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaagattttgcgaactgtgtcgcacaagttgtta 258  Q
    ||||||||||||| || ||| |||||||||||||||||||||  |||||  ||||| | ||||| ||| | |||||||| || |||||||| || |||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 26065196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 45489394 - 45489433
Alignment:
Q  32 tattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  45489394 tatttttgacttttgagttgaaccttagatgcttttgagt 45489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 21162121 - 21162056
Alignment:
Q  159 acctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 224  Q
    ||||| ||||||||  | ||||||||||||||||||||||||  |||| ||| |||| ||||||||    
T  21162121 acctgtactcgccatggcgagcagaggctctcgcctcgcgagcaaccctgaaccagaatgccttgt 21162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 3704716 - 3704776
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| |||||  || ||||  |||||||||||||  |||||||||||||||||    
T  3704716 cagagagcatgttgaatttcgtgttttggacttttgagttgatccttagatgcttttgagt 3704776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 16080074 - 16080134
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| ||||||||||||||  || ||||| |||||||    
T  16080074 cagagagcatgtcgaattctgagtttttgacttttgagttgaacattggatgcctttgagt 16080134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 18393593 - 18393653
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  ||||||||||||||  ||||||||||||||||    
T  18393593 cagagagcatgttgattttcgtattttggacttttgagttgaactttagatgcttttgagt 18393653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 20637300 - 20637236
Alignment:
Q  64 ttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||||||||| || ||| |||| ||| ||||||||||||||||| |   |||||||||||||    
T  20637300 ttttgagtgcctagacttgtataatgatgattaggaaagattggagattaagattgaacctggaa 20637236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 21715026 - 21714986
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  21715026 ttttgacttttgagttgaaccttagatgtttttgagtgcct 21714986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 22468339 - 22468379
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  22468339 ttttgacttttgagttgaaccttagatgtttttgagtgcct 22468379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 45309996 - 45310056
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  ||||||||||||||  ||||||||||||||||    
T  45309996 cagagagcatgttgattttcgtattttggacttttgagttgaactttagatgcttttgagt 45310056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 383 - 163
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| ||| |||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||||||||    
T  383 ttttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattt 284  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||| ||  ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  283 -agaatgaaactttttgagttctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttgttaggattttg 185  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| ||||||||||||||||||    
T  184 cgatctgtgtcgcacaagttgt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 33136 - 33360
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||| |||||||||  ||||||||||||||| |||||||||| || || |||  |||||||||||||||||||    
T  33136 ttttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattt 33235  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||||||||| ||| ||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||| | |||||||    
T  33236 tagaatgaaacttttggaagtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttg 33335  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| |||||||  ||||||||||||    
T  33336 cgatctgtgtcatacaagttgttaa 33360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 34 - 255
Target Start/End: Original strand, 25706 - 25926
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||| |||||||    
T  25706 tttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagatt 25805  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
     |||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25806 gtagaatgaat-ttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggatttt 25904  T
Q  234 gcgaactgtgtcgcacaagttg 255  Q
    |||| || ||| |||| |||||    
T  25905 gcgacctttgttgcacgagttg 25926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 255
Target Start/End: Complemental strand, 14973333 - 14973114
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  ||| |||| | ||||||||    
T  14973333 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattt 14973234  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||| ||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14973233 tagaaagaa-cttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttg 14973135  T
Q  235 cgaactgtgtcgcacaagttg 255  Q
    |||  ||||||||||||||||    
T  14973134 cgatttgtgtcgcacaagttg 14973114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 40213363 - 40213584
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||   |||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  40213363 ttttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 40213462  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||| ||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40213463 tagaatgaa-cttttgggaatctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 40213561  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  40213562 cgacctttgttgcacgagttgtt 40213584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 26687366 - 26687175
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  26687366 ttttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 26687267  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26687266 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtta 26687175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 18439013 - 18438792
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || | ||||  |||||||||||||||||||    
T  18439013 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagattt 18438914  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||||||| ||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  18438913 -agaatgaaacttttggaattctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttg 18438815  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  18438814 cgacctttgttgcacgagttgtt 18438792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 25476027 - 25476248
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||| ||| |||||||||||||||| ||| |||||| || ||||||  || ||||||||||||||||    
T  25476027 ttttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattt 25476126  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||||||||| |||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25476127 tagaatgaaacttttggaa-tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 25476225  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  25476226 cgacctttgttgcacgagttgtt 25476248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 34 - 257
Target Start/End: Complemental strand, 14573068 - 14572846
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| |||||||||||||  ||||||||| ||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||| |    
T  14573068 tttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagact 14572969  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
    | |||||||||| ||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||    
T  14572968 t-agaatgaaacctttggaaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggttttt 14572870  T
Q  234 gcgaactgtgtcgcacaagttgtt 257  Q
    |||| || ||| |||| |||||||    
T  14572869 gcgacctttgttgcacgagttgtt 14572846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 11424405 - 11424626
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||| | || ||||||  |||||||||||||||||||    
T  11424405 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagattt 11424504  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||||||| ||| ||||||||||||||||||| | ||| |||||||||||||||||||| |||| |||||||||||| ||||||| | |||||    
T  11424505 -agaatgaaactttttgaactctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgttaggtttttg 11424603  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  11424604 cgacctttgttgcacgagttgtt 11424626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 35 - 257
Target Start/End: Original strand, 14576475 - 14576696
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||| ||||||||||| |||||||||||| ||| |||| ||||| || ||||||  |||||||||||||||| ||    
T  14576475 ttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagactt 14576574  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     |||||||||| |||||||||||||||||||| |||||| | ||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  14576575 -agaatgaaacctttggaaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttg 14576673  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  14576674 cgacctttgttgcacgagttgtt 14576696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 17247928 - 17248141
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  17247928 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 17248027  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaag-atttt 233  Q
    ||||||||||| ||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||  ||||| || |||||| || |||||    
T  17248028 tagaatgaaac-tttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatg-cttgtttagaatttt 17248125  T
Q  234 gcgaactgtgtcgcac 249  Q
    |||| || ||||||||    
T  17248126 gcgatctttgtcgcac 17248141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 63 - 256
Target Start/End: Complemental strand, 13442725 - 13442533
Alignment:
Q  63 cttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaatctgacct 162  Q
    ||||||||||||| |||||||||||||||| |||||||| | || || |||  |||||||||||||||||| ||||||||||||| ||| | ||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  163 gaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgt 256  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||| ||||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-agattttgcgacctttgttgcacgagttgt 13442533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 40 - 256
Target Start/End: Complemental strand, 17488331 - 17488115
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    ||||||||| |||  ||||||||| ||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||||||| |||||    
T  17488331 acttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaa 17488232  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccag-aaacagagtgccttgttaagattttgcgaa 238  Q
    |||||||| | | | ||||||||||| ||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||     
T  17488231 tgaaacttgtaggattctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgccttgtt-agattttgcgac 17488133  T
Q  239 ctgtgtcgcacaagttgt 256  Q
    || ||| |||| ||||||    
T  17488132 ctttgttgcacgagttgt 17488115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 17499818 - 17499597
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||| |||  ||||||||| ||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  17499818 ttttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 17499719  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccag-aaacagagtgccttgttaagatttt 233  Q
    ||||||||||||| | | | ||||||||||| ||||||| | ||||||||||||||||||| | ||||||| || ||||||||||||||||| |||||||    
T  17499718 tagaatgaaacttgttggattctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaaacagagtgccttgtt-agatttt 17499620  T
Q  234 gcgaactgtgtcgcacaagttgt 256  Q
    |||| || ||| |||| ||||||    
T  17499619 gcgacctttgttgcacgagttgt 17499597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 30 - 256
Target Start/End: Original strand, 20698084 - 20698298
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||||||||||||| |||||||||||||||||| || |||||||||||||||| |||||||||| || || |||  |||||||||||||     
T  20698084 tgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa- 20698182  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaaga 229  Q
              |||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  20698183 ----------tgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-aga 20698271  T
Q  230 ttttgcgaactgtgtcgcacaagttgt 256  Q
    |||||||| || ||| |||| ||||||    
T  20698272 ttttgcgacctttgtggcacgagttgt 20698298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 12933952 - 12934117
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||    
T  12933952 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 12934051  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||| |||  |||  ||| ||||||||||||||  | |||||||| ||||||||||||||||    
T  12934052 tagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 43841331 - 43841220
Alignment:
Q  115 aattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacag 214  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  43841331 aattgaacctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacag 43841232  T
Q  215 agtgccttgtta 226  Q
    |||| |||||||    
T  43841231 agtgtcttgtta 43841220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 9513384 - 9513228
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||  |||||||||| |||||||||||||    
T  9513384 acttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaa 9513285  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
    ||||| |||||  ||    |||||||||| |||  | ||||||||||||||||||||    
T  9513284 tgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 9521359 - 9521203
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||  |||||||||| |||||||||||||    
T  9521359 acttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaa 9521260  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
    ||||| |||||  ||    |||||||||| |||  | ||||||||||||||||||||    
T  9521259 tgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 32308147 - 32307983
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||  ||||||||| | |||| ||    
T  32308147 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactt 32308048  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||  |||||| || ||| ||||||||||||||  | |||||||||||||||||||||||||    
T  32308047 tagaatgaa--ttttgggaa-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 49667726 - 49667890
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| ||||||| |||| |||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||    
T  49667726 ttttgacttttgagttgatccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 49667824  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||  ||  |||  ||| ||||||||||||||  | |||||||||||||||||||||||||    
T  49667825 tagaatgaaatattgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 23082979 - 23083224
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    |||||||||||||  ||| |||  |||| |||||||||||||  |||||||||||||||||||||  | |||||||||| || |||||| | | || ||     
T  23082979 cagagagcatgtcagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtagg 23083078  T
Q  111 atggaattgaacctggaaagattttagaatgaaacttttggaaatctga-cctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccaga 209  Q
    |||  |||| ||||||||||| ||||||||||||||||| | | ||||| ||| |||||||||  | ||| ||||||||||||||||||| |||||||||    
T  23083079 atgagattggacctggaaaga-tttagaatgaaactttttggattctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccaga 23083177  T
Q  210 aacagagtgccttgttaagattttgcgaactgtgtcgcacaagttgtt 257  Q
    |||| |||| |||||| || |||||||| || ||| |||| |||||||    
T  23083178 aacatagtgtcttgtt-aggttttgcgacctttgttgcacgagttgtt 23083224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 12340231 - 12340068
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| || || |||  ||||||||||||||||  |    
T  12340231 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 12340133  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||| | ||||||||||||  | ||||||||||||||||||||||||    
T  12340132 tagaatgaaactttggagaatct-aactgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 16097809 - 16097645
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| ||| ||||||||| || |||||||||||||||  ||||||||||||||||||||  |||||||||| ||||||||    
T  16097809 ttttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattt 16097710  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||| || |||||  |||  |||||||||||||||  | ||| ||||||||||||||||||||    
T  16097709 tagaatg-aatttttgtgaattggacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 197
Target Start/End: Original strand, 49389286 - 49389446
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||| ||| ||    
T  49389286 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 49389385  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgc 197  Q
    |||||||||  |||||  || ||| ||||||||||||||  | ||||||||| |||||||||||    
T  49389386 tagaatgaa--ttttgtgaa-ctgaacctgaactcgccatggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 200
Target Start/End: Original strand, 13209966 - 13210133
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||  | ||||||  |||||||||||||||    
T  13209966 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtagaatgagattgaacctggaaag 13210064  T
Q  131 attttagaatg-aaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |  |||||||| ||||| |||  ||| ||||| ||||||||||  | ||| ||||||||||||||||||||    
T  13210065 a-cttagaatgaaaactcttgagaatgtgacc-gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 53070341 - 53070505
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||||||| || ||||||  ||||||||||| |  | ||    
T  53070341 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attaatt 53070439  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     |||||| ||||||| | || |||||||||||||||||  | ||| |||||||||||||||||||||    
T  53070440 aagaatg-aactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 53070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 14179805 - 14179693
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  ||||||| |||||||    
T  14179805 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaag 14179706  T
Q  131 attttagaatgaaa 144  Q
    |  |||||||||||    
T  14179705 a-cttagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 1644325 - 1644489
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||| |||| |||||||||||| ||||||||| |||||| |||||||||||| |||||||  ||||||||||  |||| ||    
T  1644325 ttttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactt 1644424  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||  |||||  || ||| ||||||||||||||  | |||||||||||||||||||||||||    
T  1644425 tagaatgaa--ttttgtgaa-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 12852006 - 12852169
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||||| ||  ||||||||  |||||||||| ||||||||||||| || |||||||||| || || |||  |||||| |||||||||  |    
T  12852006 ttttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaaga-ct 12852104  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||||||  ||||||| ||||||||||||  | ||||||||||||| ||||||||||    
T  12852105 tagaatgaaacttttgataatctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 14666084 - 14665921
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||   |||||||||| |||||| |||||| || |||||||||| || || |||  ||||||||||||||||  |    
T  14666084 ttttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 14665986  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||||| |||||||||| |  | ||||||||||||||||||||||||    
T  14665985 tagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 14669239 - 14669076
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||   |||||||||| ||||||||||||| ||  ||||||||| || || |||  ||||||||||||||||  |    
T  14669239 ttttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaaaga-ct 14669141  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||||| ||||||||||||  | |||||||||||||| |||||||||    
T  14669140 tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 14735597 - 14735434
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||   |||||||||| |||||| |||||| || |||||||||| || || |||  ||||||||||||||||  |    
T  14735597 ttttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 14735499  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||||| |||||||||| |  | ||||||||||||||||||||||||    
T  14735498 tagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 214
Target Start/End: Complemental strand, 12399679 - 12399506
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| | |  || ||||  |||||||||        
T  12399679 tgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctg---- 12399584  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacag 214  Q
           ||||||||||| ||    ||||||||||||||||||| | ||| | ||||||||||||| ||||||||||||||||||    
T  12399583 -------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaaacag 12399506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 16104259 - 16104151
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||   |||||||||| |||| ||    
T  16104259 ttttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgggaagactt 16104160  T
Q  135 tagaatgaa 143  Q
    |||| ||||    
T  16104159 tagattgaa 16104151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 4588457 - 4588590
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| || || |||  |||||||||| |||||  |    
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaaga-ct 4588555  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgc 170  Q
    |||||||||||||| |  ||||||| ||||||||||    
T  4588556 tagaatgaaactttggagaatctga-ctgaactcgc 4588590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 12173285 - 12173213
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  12173285 cagagagcatgtcgaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 12173213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 321634 - 321718
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggtta 96  Q
    ||||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||| |||| || ||| |||||    
T  321634 agagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaaggtta 321718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 11298148 - 11298212
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||    
T  11298148 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 11298212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 14878124 - 14878196
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||| ||| ||||||||||||||| ||||    
T  14878124 cagagagcatgtcgaattctgtatttttgacttttgagttgaaccttatatgtttttgagtgcctaaagatgt 14878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 15052015 - 15051943
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  15052015 cagagagcatgttgaattctgtaattttaacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 15051943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 15060791 - 15060719
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  15060791 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 15060719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 256
Target Start/End: Complemental strand, 30030302 - 30030098
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||| ||||||||| |||||||| || |||||||||||||||| ||| |||||| ||  | |||  ||||||||||           |||    
T  30030302 acttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctg-----------gaa 30030214  T
Q  140 tgaaac-ttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtga-cccagaaacagagtgccttgttaagattttgcga 237  Q
    ||||||  ||||||| |||||||| |||||||||  | ||||||||||||||||||||||||| | ||||| |||||| ||||||||| |||||||||||    
T  30030213 tgaaacagtttggaattctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccag-aacagaatgccttgtt-agattttgcga 30030117  T
Q  238 actgtgtcgcacaagttgt 256  Q
     || ||| |||| ||||||    
T  30030116 cctttgttgcacgagttgt 30030098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 856635 - 856563
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||| ||||| ||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||    
T  856635 cagagaacatgttgaattctgtatttttgactttttagttgaaccttagatgcttttgagtgcctaaagatgt 856563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 3402585 - 3402649
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||| ||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  3402585 cagagagcttgtcgaattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 3402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 12496754 - 12496690
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  12496754 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 12496690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 18383536 - 18383600
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  18383536 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 18383600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 23077097 - 23077161
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||| |||||||||||||||||    
T  23077097 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttggatgcttttgagtgcct 23077161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 26190632 - 26190692
Alignment:
Q  15 gagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  26190632 gagcatgttgaattatgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 26190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 12171759 - 12171830
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattg 106  Q
    |||| |||||| ||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||    
T  12171759 ttttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattg 12171830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 323088 - 323026
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgc 73  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||    
T  323088 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgc 323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 324702 - 324549
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    |||||||  ||||||| |||||||||||| || |||| |||||||| ||||||||||||| ||||||  |||||||   |||   ||| |||||| || |    
T  324702 agttgaactttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatg-aatt 324604  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||| | |   |||||||||||||| || ||| |||||||||||||||||||||    
T  324603 tttgggagttgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 17524794 - 17524860
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    ||||||||||| |||||  |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  17524794 agagagcatgtagaattcagtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaa 17524860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 15471395 - 15471310
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||||||| |||||||| |||||||| ||| ||||||| |||| ||| ||||||||||||||||| |   |||||||||||||    
T  15471395 tttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaa 15471310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 17247162 - 17247239
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaat 112  Q
    |||| |||||||||||||  |||||||| |||||||||||  |||||||||||||||| |||||||||| || |||||    
T  17247162 ttttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 7792976 - 7793036
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||||||  ||||| |||||||||||||| ||||||||| |||||||    
T  7792976 cagagagcatgtcgaattatgagtttttgacttttgagttgaaccttagatgcctttgagt 7793036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 16369907 - 16369835
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |||| |||| || ||||||||||| ||||||||||||||||||| |||| ||||    
T  16369907 cagagagcatgttgaattctgtaattttgacctttgagttgaaccttagatgcttttgagtgcataaagatgt 16369835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 17674194 - 17674258
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||||  ||| |||| |||||||||||||| |||||||||||||||||||||    
T  17674194 cagagagcatgttgaatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 43842657 - 43842589
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaaga 103  Q
    |||| |||||| ||||||  ||||||||||||||||||||| | |||||||||||||| ||||||||||    
T  43842657 ttttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaaga 43842589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 2050855 - 2050913
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    ||||||| |||||||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  2050855 agttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagatt 2050913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 326794 - 326854
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  326794 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 326854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 15483138 - 15483078
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  15483138 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 15483078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 20461130 - 20461190
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  20461130 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 20461190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 31097184 - 31097244
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  31097184 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 31097244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 257
Target Start/End: Complemental strand, 42386878 - 42386669
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| ||||| || || ||||||| | ||||||  |||||||| ||||| |||| |  ||| ||  |||||||||| ||| | || |||||||||||    
T  42386878 agttgaaccttagttgtttatgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctg-aaatagttaagaatgaaact 42386780  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaagattttgcgaactgtgtc 245  Q
    ||||| | |   ||||||||||||||  | ||| |||||||||| ||||||||||  ||||   |||||  |||||| ||| ||||||||||||| ||||    
T  42386779 tttgggagttatacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacaga-agccttgtttaggattttgcgaactttgtc 42386681  T
Q  246 gcacaagttgtt 257  Q
    |||| |||||||    
T  42386680 gcacgagttgtt 42386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 16796875 - 16796837
Alignment:
Q  186 ctctcgcctcgcgagtgacccagaaacagagtgccttgt 224  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgt 16796837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 11852067 - 11852006
Alignment:
Q  14 agagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||| |||||  ||| |||| |||||| ||||||| |||||||||||||||||||||    
T  11852067 agagcatgttgaatttcgtaattttaacttttcagttgaaccttagatgcttttgagtgcct 11852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 3389600 - 3389640
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  3389600 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 11594769 - 11594829
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  11594769 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttgagt 11594829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 15849719 - 15849775
Alignment:
Q  15 gagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  15849719 gagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 15849775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 16690695 - 16690635
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||| |||||||||||||| ||||||||| |||||||    
T  16690695 cagagagcatgttgattttcgtatttttgacttttgagttgaaccttagatgcctttgagt 16690635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 16697268 - 16697208
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||| |||||||||||||| ||||||||| |||||||    
T  16697268 cagagagcatgttgattttcgtatttttgacttttgagttgaaccttagatgcctttgagt 16697208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 16809868 - 16809775
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||||||| |||||||||||||| |||| |||||||||||||| | ||||    |||||||| |||||||||| || || |||  ||||| |||||||    
T  16809868 gtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaaca----taataatgattaggaaagaatgtaggatgagattgatcctggaa 16809775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 19725531 - 19725595
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||||  ||| |||| |||||||||||||| |||| ||||||||| ||||||    
T  19725531 cagagagcatgttgaatttcgtaattttgacttttgagttgaaccttaaatgcttttgtgtgcct 19725595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 14234957 - 14234899
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    ||||||| |||||||  |||||||||||| ||||||| |||| ||| ||||||||||||    
T  14234957 agttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagatt 14234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 11557015 - 11557075
Alignment:
Q  11 cagagagcatgtcgaattatgtatttttt-acttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||| ||||||||| |||| ||||  |||||||||||||| |||||||||||||||||    
T  11557015 cagagagcttgtcgaatt-tgtaattttggacttttgagttgaaccttagatgcttttgagt 11557075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 37250932 - 37250973
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||||| || ||| |||||||||||||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 37250973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 52523390 - 52523439
Alignment:
Q  56 ttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    ||||||| |||||||||||| ||||||| |||||||  ||||||||||||    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagatt 52523439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 1982440 - 1982500
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||| ||||||||    
T  1982440 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgtttttgagt 1982500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 15877471 - 15877511
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  15877471 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15877511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||| || ||| ||||||||||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 23052696 - 23052760
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||  |||| || | ||||||||| |||||||| ||||||||||||    
T  23052696 cagagagcatgttgaattttgtgattttgacctgtgagttgaaccttagatgtttttgagtgcct 23052760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 20882 - 20662
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  20882 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatta 20783  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  20782 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgccttgtt-agattttg 20684  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  20683 cgacctttgttgcacgagttgt 20662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 126; Significance: 5e-65; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 4987 - 4763
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||||||  |||||||||||||||||||    
T  4987 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagattt 4888  T
Q  135 t-agaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
    | ||||||||||||| |||| ||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||| || ||| |||| ||||||    
T  4887 ttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggatttt 4789  T
Q  234 gcgaactgtgtcgcacaagttgttaa 259  Q
    |||| | |||||||||||||||||||    
T  4788 gcgatcagtgtcgcacaagttgttaa 4763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 12569 - 12345
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||||||  |||||||||||||||||||    
T  12569 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagattt 12470  T
Q  135 t-agaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
    | ||||||||||||| |||| ||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||| || ||| |||| ||||||    
T  12469 ttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggatttt 12371  T
Q  234 gcgaactgtgtcgcacaagttgttaa 259  Q
    |||| | |||||||||||||||||||    
T  12370 gcgatcagtgtcgcacaagttgttaa 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 22521 - 22297
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||||||  |||||||||||||||||||    
T  22521 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagattt 22422  T
Q  135 t-agaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
    | ||||||||||||| |||| ||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||| || ||| |||| ||||||    
T  22421 ttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggatttt 22323  T
Q  234 gcgaactgtgtcgcacaagttgttaa 259  Q
    |||| | |||||||||||||||||||    
T  22322 gcgatcagtgtcgcacaagttgttaa 22297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 18262 - 18326
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||| |||| ||  ||||| |||||||||||||| |||||||| ||||||||||||    
T  18262 cagagagcatgtcaaattctgagtttttgacttttgagttgaaccttagatgtttttgagtgcct 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 52391 - 52200
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  52391 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 52292  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  52291 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgtta 52200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 237
Target Start/End: Original strand, 167632 - 167822
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |  || |||  |||||||||              
T  167632 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct---------- 167721  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     ||| |||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  167722 -agattgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttg 167819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 55 - 257
Target Start/End: Complemental strand, 39218 - 39018
Alignment:
Q  55 cttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaa 154  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||| ||||||||||| ||||      
T  39218 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttt-gaatgaaacttgtggat- 39121  T
Q  155 tctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagtt 254  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||| || ||| |||| ||||    
T  39120 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgttaggtttttgcgacctttgttgcacgagtt 39021  T
Q  255 gtt 257  Q
    |||    
T  39020 gtt 39018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 115; Significance: 2e-58; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 40335 - 40114
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  | ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||  ||||||||||||||||||     
T  40335 ttttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattg 40236  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    |||||||||||||||||   ||| ||||| ||||||||| | |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||||||    
T  40235 tagaatgaaacttttgg-tttctaacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatgattttg 40137  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||||| |||||    
T  40136 cgacctttgttgcacaatttgtt 40114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 39573 - 39680
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||| ||| |||||||||| ||||| |||||||||| || ||||||  |||||||||||||||| |     
T  39573 ttttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagaatg 39672  T
Q  135 tagaatga 142  Q
    ||||||||    
T  39673 tagaatga 39680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 26662 - 26555
Alignment:
Q  77 aacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacaga 176  Q
    |||||||||||||||| |||||||||| || || |||  ||| |||||||||||||| ||||||||||||||||| | ||||||||||| ||||||| |     
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttgg-attctgacctgaagtcgccacggc 26564  T
Q  177 gagcagagg 185  Q
    |||||||||    
T  26563 gagcagagg 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 59179 - 59308
Alignment:
Q  69 agtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactc 168  Q
    ||||||| |||||||||||||||| |||||| ||| || ||||||  |||||||||| |||||  ||||||||||| ||| |  || |||||| ||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaacctgacc-gaactc 59276  T
Q  169 gccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||  | ||||||||||||||||||||||||    
T  59277 gccatggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 26213 - 26173
Alignment:
Q  197 cgagtgacccagaaacagagtgccttgttaagattttgcga 237  Q
    ||||||||||||||||  |||||||||||| ||||||||||    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcga 26173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 114; Significance: 7e-58; HSPs: 4)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 35 - 256
Target Start/End: Original strand, 23944 - 24163
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||| ||||||||||||| |||||||||||||||| |||||||| | || || |||  |||||||||||||| |||     
T  23944 ttttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaa-attg 24042  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  24043 tagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgtt-agattttg 24141  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  24142 cgacctttgttgcacgagttgt 24163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 34529 - 34593
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||| ||||||||| |||||||| ||||||||||||    
T  34529 cagagagcatgtagaattctgtatttttgacttgtgagttgaaccttagatgtttttgagtgcct 34593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 41185 - 41239
Alignment:
Q  24 gaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    ||||| ||||||||| |||| ||||||||| |||||||| |||||||||||||||    
T  41185 gaattctgtatttttgacttgtgagttgaaccttagatgattttgagtgcctaaa 41239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 64329 - 64269
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||   |||||  ||||| |||||||||||||| ||||||||| |||||||    
T  64329 cagagagcatgtcattttatgagtttttgacttttgagttgaaccttagatgcctttgagt 64269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 34 - 254
Target Start/End: Original strand, 5762 - 5981
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||||| || |||  ||||||||||| ||||||    
T  5762 ttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgggaagatt 5861  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
     | |||||||| ||  || | ||||||||||||| ||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  5862 attgaatgaaatttgcgggattctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgccttgtt-agatttt 5960  T
Q  234 gcgaactgtgtcgcacaagtt 254  Q
    |||| || ||| |||| ||||    
T  5961 gcgacctttgttgcacgagtt 5981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 821 - 622
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||||||  ||||||||| |||||| ||    
T  821 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatt 722  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||||||| ||||||| ||||||||||| | | ||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  721 tagaatgaaacttttgg-aatctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 3949 - 3728
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||   ||||||||||||||||| || |||||||||||||||| |||||||||| || || |||  ||||||||||||| ||||     
T  3949 ttttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattg 3850  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    |||||| |||||| ||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||  ||||| || |||||    
T  3849 tagaatcaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgtt-aggttttg 3751  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  3750 cgacctttgttgcacgagttgtt 3728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 8175 - 8365
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||| ||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  8175 ttttgacttttgagttgatcctt-gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 8273  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    ||||||||||||||||||| |||| ||| |||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  8274 tagaatgaaacttttggaattctggcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtta 8365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 112; Significance: 1e-56; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 125061 - 124844
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||     |||||||||||||||     
T  125061 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattg 124965  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||    
T  124964 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgtt-agattttg 124866  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  124865 cgacctttgttgcacgagttgt 124844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 63035 - 62932
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||  |||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||  |||||||||||||| |||||||||    
T  63035 acttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaa 62936  T
Q  140 tgaa 143  Q
    ||||    
T  62935 tgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 136132 - 136173
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||||| || ||| |||||||||||||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 144840 - 144881
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||||| || ||| |||||||||||||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 175243 - 175203
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  175243 ttttgacttttgagttgaaccttagatgtttttgagtgcct 175203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 1720 - 1932
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  1720 ttttgacttttgagttgatccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattt 1818  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||| ||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||||||||  ||||| ||| |  ||| |||||||    
T  1819 tagaatgaaac-tttggaaatctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttg 1917  T
Q  235 cgaactgtgtcgcac 249  Q
    ||| || ||||||||    
T  1918 cgatctttgtcgcac 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 13571 - 13350
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||| ||| |||||||||| || || |||  |||||| ||| |||||||     
T  13571 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattg 13472  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||| || |||||    
T  13471 tagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgtt-aggttttg 13373  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  13372 cgacctttgttgcacgagttgtt 13350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 34603 - 34437
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| ||||    
T  34603 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaag 34504  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcga 199  Q
    |  ||||||||||| ||| |  ||||||||| ||||||||||  | |||||||||||||||||||||||    
T  34503 a-cttagaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 35 - 256
Target Start/End: Original strand, 51526 - 51746
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||| ||| || || |||  ||||||||||||||||||     
T  51526 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattg 51625  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    | ||||||||||| ||| | | ||||||||||||||||| | |||||||||||||| |||||| |||||||||||||||||||| |||||| ||||||||    
T  51626 tcgaatgaaacttgtgggattttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtt-agattttg 51724  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  51725 cgacctttgttgcacgagttgt 51746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 33003 - 32945
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    |||||||  ||||||| || ||||||||| ||||||| |||||||| ||||||||||||    
T  33003 agttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagatt 32945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 2330 - 2110
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  2330 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 2231  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||||||| ||| | ||||||||||||||||||  | ||| ||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||    
T  2230 tagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtt-agattttg 2132  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
     || || ||| |||| ||||||    
T  2131 tgacctttgttgcacgagttgt 2110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 207160 - 207324
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||| ||| || || |||  ||||||||||||||||      
T  207160 tttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaaga-c 207258  T
Q  134 ttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  207259 ttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 666 - 837
Alignment:
Q  46 gagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaac 145  Q
    |||||||  |||| |||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||| ||| ||||||| ||||||||| |    
T  666 gagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatgaa-c 764  T
Q  146 ttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtg 218  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  765 ttttggaaatctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaaacagagtg 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 339593 - 339815
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| |||||||||||||||| ||  |||||||||||| ||||||| || || || |||  ||||||||||||||||||     
T  339593 ttttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattg 339692  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||| ||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||    
T  339693 tagaatgaa-cttttgggaatctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgtt-aggttttg 339790  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| || ||| |||| ||| |||||    
T  339791 cgacctttgttgcacgagtcgttaa 339815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 40390 - 40170
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| || ||||| ||||||| || || || |||  |||||||||| | |||||     
T  40390 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctg-acagattg 40292  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||||| |  ||||    
T  40291 tagaatgaa-cttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttg 40193  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  40192 cgacctttgttgcacgagttgtt 40170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 18275 - 18347
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  18275 cagagagcatgtcgaattctgcattttttacttttgagttgaaccttagatgcctttgagtgcctaaagatgt 18347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 126 - 259
Target Start/End: Complemental strand, 39864 - 39732
Alignment:
Q  126 gaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||     
T  39864 gaaagattgtagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 39766  T
Q  226 aagattttgcgaactgtgtcgcacaagttgttaa 259  Q
    | |||||||||| |||||||||||||||||||||    
T  39765 aggattttgcgatctgtgtcgcacaagttgttaa 39732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 126 - 259
Target Start/End: Original strand, 74948 - 75080
Alignment:
Q  126 gaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||     
T  74948 gaaagattgtagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 75046  T
Q  226 aagattttgcgaactgtgtcgcacaagttgttaa 259  Q
    | |||||||||| |||||||||||||||||||||    
T  75047 aggattttgcgatctgtgtcgcacaagttgttaa 75080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 10637 - 10419
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||| ||| || || ||||||||||       |||  |||||||||||||||||||    
T  10637 ttttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaaga-------atgagattgaacctggaaagattt 10545  T
Q  135 tagaatgaaacttttggaaat-ctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
    ||||||||||  |||  |||| |||||||||||||||||| | ||||||||  || |||||||||||||||| ||||||| |||||||||||| ||||||    
T  10544 tagaatgaaaaattttcaaattctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctagaaacaaagtgccttgttaggatttt 10445  T
Q  234 gcgaactgtgtcgcacaagttgttaa 259  Q
    |||| |||||||||||||||||||||    
T  10444 gcgatctgtgtcgcacaagttgttaa 10419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 15257 - 15426
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| || |||| |||||||| |||||||||| || ||||||  |||||| ||||| ||||||    
T  15257 ttttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattt 15356  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacc 205  Q
    ||||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15357 tagaatgaaac-tttgggaatctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacc 15426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 12924 - 12884
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||| || ||| ||||||||||||||||||||    
T  12924 cctgaactcgccatagggagtagaggctctcgcctcgcgag 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 23361 - 23140
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||| ||||||||||| |||||||||||||||| |||||||||| || || |||  |||| | |||||||||||     
T  23361 ttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattg 23262  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||  || |||||||| ||||| |||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||    
T  23261 tagaattgaa-ttttggaattctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgttaggtttttg 23163  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  23162 cgacctttgttgcacgagttgtt 23140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 97; Significance: 9e-48; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 32601 - 32824
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||| ||| |||||||||||||||||| || |||||||||||||||| ||||||| || |||||||||  |||||||||| ||||||||    
T  32601 ttttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattt 32700  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||| || |||||  | |   |||  |||||||||||| ||| |||||||| |||||||||||||||||| ||||||| || ||||||| |||||||    
T  32701 tagaatg-aatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttg 32799  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| ||||||||||| | |||||||    
T  32800 cgatctgtgtcgcaccaattgttaa 32824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 46404 - 46181
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||| ||| |||||||||||||||||| || |||||||||||||||| ||||||| || |||||||||  |||||||||| ||||||||    
T  46404 ttttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattt 46305  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||| || |||||  | |   |||  |||||||||||| ||| |||||||| |||||||||||||||||| ||||||| || ||||||| |||||||    
T  46304 tagaatg-aatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttg 46206  T
Q  235 cgaactgtgtcgcacaagttgttaa 259  Q
    ||| ||||||||||| | |||||||    
T  46205 cgatctgtgtcgcaccaattgttaa 46181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 16565 - 16345
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||  |||||||||||||| |||||||||||||||| |||||||||| || || | |  ||||||||||||||||||     
T  16565 ttttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaagattg 16467  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    ||||||  || |||||||| ||||| |||| |||||||| | || ||||||| ||| |||||| |||||||||||||||||| | ||||||| | |||||    
T  16466 tagaattgaa-ttttggaattctgaactgagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaacagagagtcttgttaggtttttg 16368  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  16367 cgacctttgttgcacgagttgtt 16345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 19647 - 19707
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  19647 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 19707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 259
Target Start/End: Complemental strand, 4997 - 4779
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||  |||| ||||||| ||||||  |||||||||| |||||||||||||    
T  4997 acttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaagattttagaa 4898  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaac 239  Q
    || ||||||||   ||| ||||||  |||||||  | ||||| ||||||||||||||| ||  ||||||||||||| |||| ||||| |||||||||| |    
T  4897 tg-aacttttgtcgatcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacc 4799  T
Q  240 tgtgtcgcacaagttgttaa 259  Q
    | ||| |||| |||||||||    
T  4798 tttgttgcacgagttgttaa 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 8954 - 8733
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| || |||||||||| || |||||||||| || || |||  ||||||||| ||||||||     
T  8954 ttttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacctagaaagattg 8855  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
    || |||| ||||| ||| | ||||||||||||||||||| |  || ||||||||||||||||||| |||||||||||||||||| |||||| || |||||    
T  8854 taaaatggaacttgtgggattctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgtt-aggttttg 8756  T
Q  235 cgaactgtgtcgcacaagttgtt 257  Q
    ||| || ||| |||| |||||||    
T  8755 cgacctttgttgcacgagttgtt 8733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 121 - 259
Target Start/End: Complemental strand, 28223 - 28086
Alignment:
Q  121 acctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgcc 220  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||    
T  28223 acctggaaagattt-agaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcc 28125  T
Q  221 ttgttaagattttgcgaactgtgtcgcacaagttgttaa 259  Q
    |||| | |||||||| | |||||||||||||||||||||    
T  28124 ttgtcaggattttgcaatctgtgtcgcacaagttgttaa 28086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 29015 - 28924
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctgg 126  Q
    |||| |||||||||| ||  ||||||||||||||||| ||| |||||||||||||||| |||||||||| || ||||||  |||||||||||    
T  29015 ttttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 237
Target Start/End: Original strand, 10075 - 10269
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||||      
T  10075 gtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-- 10172  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10173 ---------ttaaacttgtgggattctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agat 10262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 235
Target Start/End: Original strand, 701 - 893
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||| || || |||  |||||||||||||      
T  701 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-- 798  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  799 ---------ttaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgtt-agat 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 205
Target Start/End: Complemental strand, 17259 - 17090
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||||||| || ||||||  |||||||||||| ||||||    
T  17259 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattt 17160  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacc 205  Q
    |||||| |||| ||||  ||| ||||||||||||||||  | |||||||||||||||||||||||||||||    
T  17159 tagaataaaac-tttgagaatatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 17090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 7472 - 7576
Alignment:
Q  94 ttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcc 193  Q
    |||||||||| || || |||  |||||||||||||||| || ||||||||||||| |  |||||||| |||||||||||  |  ||||||||||||||||    
T  7472 ttaggaaagaatgtaggatgagattgaacctggaaagactt-agaatgaaactttggataatctgac-tgaactcgccatggcaagcagaggctctcgcc 7569  T
Q  194 tcgcgag 200  Q
    |||||||    
T  7570 tcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 20591 - 20426
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||| ||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || |||||   |||||||||||||||| ||    
T  20591 ttttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaaga-tt 20493  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||||||||||  |||||||||| ||||||||   |||||||||||||||||||||||||    
T  20492 tagaatgaaacttttggagttctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 237
Target Start/End: Original strand, 702 - 892
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |  || |||  |||||||||              
T  702 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct---------- 791  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
     ||| |||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  792 -agattgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttg 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 133132 - 132967
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||    
T  133132 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactt 133033  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||| |||  |||  ||| ||||||||||||||  | |||||||||||||||||||||||||    
T  133032 tagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 15114 - 15327
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||| ||||||| | ||||||||||||||||||| || ||||||||||||| |||||||||| || || |||  |||||||||||||      
T  15114 gtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-- 15211  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | |||||| | | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15212 ---------taaaacttgtaggattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agat 15301  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  15302 tttgcgacctttgttgcacgagttgt 15327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 7789 - 7718
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||| ||||| ||||| ||||||||| || ||||||||||| |||||||||||||||||||||||| ||||    
T  7789 agagaacatgttgaattctgtatttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgt 7718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 32914 - 32968
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtct 85  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||| |||||||||    
T  32914 gtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgtct 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 32567 - 32397
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  32567 tgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 32468  T
Q  130 gattttagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    || |||||||||||| |||  |||  ||| ||||||||||||||  | |||||||||||||| ||||||||||    
T  32467 gactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 604 - 802
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |  |||||||||||    | |     
T  604 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctgg-tttagta 702  T
Q  135 tagaatgaaactt-ttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatttt 233  Q
     |||||||||||| |||||||||||||||||||||||||  | ||||||||| || ||||||| |||||||| |||||||||| | ||||||| ||||||    
T  703 gagaatgaaacttgttggaaatctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctagaaacagagagtcttgttaggatttt 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 3973 - 3771
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||||||||  ||||||||||| |||||| ||| ||||| |||||||||| || ||     
T  3973 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtagg 3874  T
Q  111 atggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaa 210  Q
    |||  ||||||||||           ||||||||||| ||| | ||||||||||||||||||  | ||||||||||||||| |||||||||||||| |||    
T  3873 atgagattgaacctg-----------gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaa 3785  T
Q  211 acagagtgccttgt 224  Q
    ||||||||||||||    
T  3784 acagagtgccttgt 3771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 8037 - 7835
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||||||||  ||||||||||| |||||| ||| ||||| |||||||||| || ||     
T  8037 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtagg 7938  T
Q  111 atggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaa 210  Q
    |||  ||||||||||           ||||||||||| ||| | ||||||||||||||||||  | ||||||||||||||| |||||||||||||| |||    
T  7937 atgagattgaacctg-----------gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaa 7849  T
Q  211 acagagtgccttgt 224  Q
    ||||||||||||||    
T  7848 acagagtgccttgt 7835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 609 - 437
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||| ||||  ||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||    
T  609 ttttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattt 510  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccag 208  Q
    ||||||| || |||||  | |   ||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  509 tagaatg-aatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 1406 - 1172
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggaga 110  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| ||||||||||| |||||  ||||||||| |||||||||| || ||     
T  1406 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtagg 1307  T
Q  111 atggaattgaacctggaaagattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaa 210  Q
    |||  ||||||||||           ||||||||||| ||| | ||||||| ||||||||||  | ||||||||||||||||||| |||||||||| |||    
T  1306 atgagattgaacctg-----------gaatgaaacttgtgggattctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaa 1218  T
Q  211 acagagtgccttgttaagattttgcgaactgtgtcgcacaagttgtt 257  Q
    ||| ||||||||| | ||| ||||||| || ||| |||| |||||||    
T  1217 acaaagtgccttg-tgagactttgcgacctttgttgcacgagttgtt 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 13967 - 13773
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||  || || |||  ||||||||||         
T  13967 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctg----- 13873  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
          |||| |||||| ||  | ||||| ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  13872 ------gaattaaacttgtgagattctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtt-agat 13780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 28451 - 28616
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||   |||| ||    
T  28451 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactt 28550  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||| |||  |||  ||| ||||||||||||||  | |||||||||||||||||||||||||    
T  28551 tagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 7290 - 7126
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  7290 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 7191  T
Q  135 tagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||  |||| |  | ||| ||||||||||||||  | ||| |||||||||||||| |||||    
T  7190 tagaatgaa--tttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 13679 - 13470
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||| |||||||||||||||| || ||||||||||||| |||||||||| || || |||  | |||||||||||          
T  13679 ttttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa------ 13586  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttg 234  Q
         |||||||| ||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  13585 -----tgaaacttgtggcattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgccttgtt-agattttg 13492  T
Q  235 cgaactgtgtcgcacaagttgt 256  Q
    ||| || ||| |||| ||||||    
T  13491 cgacctttgttgcacgagttgt 13470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 101873 - 101709
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    ||||||||||||||||||  |||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||| ||| ||    
T  101873 tttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 101774  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||  |||||  ||  ||||||||||||||||  | ||||||||||||| |||||| ||||    
T  101773 tagaatgaa--ttttgtgaacttgacctgaactcgccatggcgagcagaggctcttgcctcgggagt 101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 38119 - 38191
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||| ||||||| ||||| |||| |||| |||||||||||||| | || ||| |||||||| |||||| ||||    
T  38119 cagaaagcatgttgaattctgtacttttgacttttgagttgaaccatatatgtttttgagtacctaaagatgt 38191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 39863 - 39907
Alignment:
Q  84 ctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  39863 ctaataatggttaggaaagattggagattgacattcaacctggaa 39907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 173
Target Start/End: Original strand, 17650 - 17788
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||||||||||| |||||     
T  17650 ttttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattg 17749  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccac 173  Q
    ||||||||||||| ||| | |||||||||||||||||||    
T  17750 tagaatgaaacttgtgggattctgacctgaactcgccac 17788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 2082 - 2250
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| ||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  |||||||||| |||    
T  2082 tgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaa 2181  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||  ||||||||||| ||| |  ||||||||| ||||||||||  | ||||||||||||||||||||||||    
T  2182 ga-cttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 45426 - 45596
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||| || ||||||||||||| |||||||||||||| |||||  ||||||||||| ||    
T  45426 tgtaatttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaa 45525  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    || |||||||||||  |||||  |||   ||||||||||||||  | ||| ||||||||||||||||||||    
T  45526 gactttagaatgaattttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 4780 - 4956
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||         
T  4780 gtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----- 4874  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtg 218  Q
          ||||  ||||| ||| | |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  4875 ------gaattgaacttatgggattctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaaacagagtg 4956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 19750 - 19573
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||| ||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||  ||||||||||||||    
T  19750 tgtaattttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaa 19651  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccag 208  Q
    |||||||||||| || ||||     |   ||||||||||||||  | ||||||||||||||||||||||| ||||||||    
T  19650 gattttagaatg-aatttttatgtgttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccag 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 10389 - 10226
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||| || || |||||||||| || || |||  ||||||||||||||||  |    
T  10389 ttttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 10291  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||| |||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  10290 tagaaggaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 217
Target Start/End: Complemental strand, 32536 - 32361
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||| ||  | |||  ||||||||||         
T  32536 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctg----- 32442  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagt 217  Q
          |||| |||||| ||| | |||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  32441 ------gaattaaacttgtgggattctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagt 32361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 52051 - 51857
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||||||||||||||| || ||| ||||| ||||||||||| |||| ||||||||||| |||||||||| || || | |  |||||||||||||      
T  52051 gtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaa-- 51954  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             ||||||||  || | ||| |||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  51953 ---------tgaaacttacgggattctaacctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agat 51864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 256
Target Start/End: Original strand, 11171 - 11375
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||           |||    
T  11171 acttttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaa 11259  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaac 239  Q
    |||||||| ||| |  |||||||||||||||||  | ||| |||||||||| ||||||||||||| |||||||| |||| |||||| ||||||||||| |    
T  11260 tgaaacttgtgggatactgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgtt-agattttgcgacc 11358  T
Q  240 tgtgtcgcacaagttgt 256  Q
    | ||| |||| ||||||    
T  11359 tttgttgcacgagttgt 11375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 28917 - 29081
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| ||||||| |||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||  ||||||||| ||||    
T  28917 tgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaa 29016  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcg 196  Q
    ||  ||||||||||| ||| |  ||||||||| ||||| ||||  | ||||||||||||||||||||    
T  29017 ga-cttagaatgaaaatttagagaatctgacc-gaactagccatggcgagcagaggctctcgcctcg 29081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 2465 - 2609
Alignment:
Q  55 cttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaacttttggaaa 154  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||||||||| || ||   |    
T  2465 cttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgtg---a 2561  T
Q  155 tctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     ||| ||||||||||||||  | ||| |||||||||||||||||||||    
T  2562 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 7936 - 8099
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| || || |||  ||||||||||||||||  |    
T  7936 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 8034  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||| | | ||||||||||  | ||||||||||||||||||||||||    
T  8035 tagaatgaaactttggagaatct-aacagaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 1939 - 2108
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||  |||||||| ||||||||  || |||||||||||||||| ||||||||||||||||||||  ||||||| |  ||||    
T  1939 gtatttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaag 2038  T
Q  131 attttagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    | |||||||||||| |||  |||  ||| ||||||||||||||  |  ||||||||||||||||||||||||    
T  2039 actttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 161164 - 161056
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||| ||| ||    
T  161164 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 161065  T
Q  135 tagaatgaa 143  Q
    |||||||||    
T  161064 tagaatgaa 161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 422163 - 422221
Alignment:
Q  14 agagcatgtcgaattatgtatttttta-cttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| ||||||||| |||| |||| | ||||||||||||| |||||||||||||||||    
T  422163 agagcttgtcgaattttgtaattttgaacttttgagttgaaccttagatgcttttgagt 422221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 173766 - 173706
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||| ||||||| ||||||||  |||||||    
T  173766 cagagagcatgtcgaattctgagtttttgactttttagttgaaccttagatgtctttgagt 173706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 256
Target Start/End: Complemental strand, 2424 - 2211
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||| ||| |||||||||||  ||||||| || || || |||  |||||||||||||      
T  2424 gtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctggaa-- 2327  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagat 230  Q
             | ||||||  || |  |||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| | |||| ||||    
T  2326 ---------ttaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgtt-agat 2237  T
Q  231 tttgcgaactgtgtcgcacaagttgt 256  Q
    ||||||| || ||| |||| ||||||    
T  2236 tttgcgacctttgttgcacgagttgt 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 226
Target Start/End: Complemental strand, 5321 - 5136
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| |||||||||||||| ||||||||||||||||||| | || ||||||||||||| |||||||||| || || |||  ||||||||||        
T  5321 tgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctg---- 5226  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
           ||||||||||| ||    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| |||||||||||| |||||||    
T  5225 -------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaacagagtgacttgtta 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 256
Target Start/End: Complemental strand, 7081 - 6869
Alignment:
Q  32 tattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaaga 131  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||| ||| |||||||||||  ||||||| || || || |||  |||||||||||||       
T  7081 tatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctggaa--- 6985  T
Q  132 ttttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagatt 231  Q
            | ||||||  || |  |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| | |||| |||||    
T  6984 --------ttaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgtt-agatt 6894  T
Q  232 ttgcgaactgtgtcgcacaagttgt 256  Q
    |||||| || ||| |||| ||||||    
T  6893 ttgcgacctttgttgcacgagttgt 6869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 197
Target Start/End: Original strand, 12451 - 12611
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| || || |||  ||||||||||||||||       
T  12451 ttttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ca 12549  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgc 197  Q
    |||||||||||||| |  ||||||| ||||||||||||  | |||||||||||||||||||||    
T  12550 tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

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Target: scaffold0358 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 404 - 224
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||||| |||             
T  404 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg--------- 314  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
      |||| |||||| ||| | ||||||||||||||||||  | ||||||||||||||||||||| ||||||||| ||  |||||| |||||||    
T  313 --gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgtta 224  T

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Target: scaffold0358; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 5180 - 5000
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  |||||| |||             
T  5180 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg--------- 5090  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
      |||| |||||| ||| | ||||||||||||||||||  | ||||||||||||||||||||| ||||||||| ||  |||||| |||||||    
T  5089 --gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgtta 5000  T

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Target: scaffold0064 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 226
Target Start/End: Complemental strand, 47458 - 47274
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaag 130  Q
    ||||| || |||||||||||||| |||||||||||||||||| || || ||||||||||||| ||||||| || || || |||  |||||||||||||      
T  47458 gtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctggaa-- 47361  T
Q  131 attttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
             | |||||| ||| | |||||||||| |||||||| ||| ||||||||||||||||||||||||||||| || ||||||| |||||||    
T  47360 ---------ttaaacttgtgggattctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaaccagagtgacttgtta 47274  T

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Target: scaffold0064; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 64282 - 64346
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  64282 cagagagcatgttgaattatgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 64346  T

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Target: scaffold0266 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 18600 - 18712
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||| |||  ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||     
T  18600 ttttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 18699  T
Q  135 tagaatgaaactt 147  Q
    |||||||||||||    
T  18700 tagaatgaaactt 18712  T

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Target: scaffold0166 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 9481 - 9639
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||| || ||| |||||| || || |||  |||||| |||||||||  ||||||    
T  9481 acttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaaga-cttagaa 9579  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||| |  ||||||| ||||||||| ||  | ||||||||||||||||||||||||    
T  9580 tgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 200
Target Start/End: Original strand, 24291 - 24456
Alignment:
Q  33 attttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagat 132  Q
    |||||| ||||||||||| || |||||||||  |||||||||| ||||||||||||| || |||||||||| |  || |||  ||||||||| ||||||     
T  24291 atttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaaga- 24389  T
Q  133 tttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
     ||||||||||||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  24390 cttagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

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Target: scaffold0876 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 2727 - 2825
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || |||  ||||||||||||||||||    
T  2727 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt 2825  T

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Target: scaffold0261 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 16142 - 15974
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaa 129  Q
    |||| |||| ||||| |||||||  ||||||||||||||||||||| || ||||||||||||| |||||||||| || ||||||  |||||||||| |||    
T  16142 tgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaa 16043  T
Q  130 gattttagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||  | | ||||||| ||| |  ||||||||| ||||||||||  | ||||||||||||||||||||||||    
T  16042 ga-ctcaaaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

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Target: scaffold0261; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 1845 - 1776
Alignment:
Q  6 aggatcagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| ||||||||||||   |||  ||| |||| |||||||||||||| |||||||| ||||||||||||    
T  1845 aggaccagagagcatgtaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcct 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 79974 - 80137
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| ||||||||||||||  ||| ||||  |||||||||| ||||||||||||| || |||||||||| || || |||  ||||||||||||||||  |    
T  79974 ttttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-ct 80072  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    |||||||||||||| |  ||||||| ||||||||| ||  | ||||||||||||||||||||||||    
T  80073 tagaatgaaactttggagaatctga-ctgaactcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 21188 - 21244
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgctttt 67  Q
    |||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||    
T  21188 cagagagcatgtcgaattctatattttttacttttgagttgaaccttagatgttttt 21244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 16747 - 16568
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| || || | |  ||||||||||             
T  16747 ttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctg--------- 16657  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
       ||| |||||| ||| | | ||||| ||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  16656 --aaattaaacttatgggattttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt 16568  T

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Target: scaffold0810 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 3411 - 3318
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||| |||||||||||||  |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  3411 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaa 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 506 - 344
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||| ||||| ||||||||| || |||||||| ||||||||||||| || |||||||||| || || |||  |||||||||||||| |  |    
T  506 ttttgacttttgaattgaaccttagatgcctt-gagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaata-ct 409  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||| |||||| |  ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  408 tagaatggaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 9556 - 9391
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagatt 133  Q
    ||||| ||||||||| |||  ||||||||||||||||||||| |||| ||||||||| | |||||||||| || ||| ||  |||| ||||||||||| |    
T  9556 tttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagt 9457  T
Q  134 ttagaatgaaacttttggaaatctg-acctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||  |||| |  | ||| ||||||||||||||  | ||| ||||||||||||||||||||    
T  9456 ttagaatgaa--tttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 46346 - 46418
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  46346 cagagagcatgttgaattatgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgt 46418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 12407 - 12243
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||| ||||  |||||||||||||||||| || || |||| |||||||| |||||||||| || ||||||  ||||||||||||   |||     
T  12407 ttttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatta 12308  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
     ||||||||  ||||||||| |||||||||||||||||  | ||| |||||||||| ||||||||||    
T  12307 -agaatgaactttttggaaa-ctgacctgaactcgccatggcgagtagaggctctcacctcgcgagt 12243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 197
Target Start/End: Original strand, 20073 - 20228
Alignment:
Q  40 acttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaa 139  Q
    |||||||||||||  ||||||||||||||||| ||| ||||||| ||||||||  ||||||||| || ||||||  ||||||||||| |  | || ||||    
T  20073 acttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctgg-attaattaagaa 20171  T
Q  140 tgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgc 197  Q
    || ||||||| | || |||||||||||||||||  | ||| |||||||||||||||||    
T  20172 tg-aactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgc 20228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 54041 - 53981
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| ||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  54041 cagagagcatgttgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 53981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 65412 - 65476
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||   ||| |||| |||| |||||||||||||| |||||||| ||||||||||||    
T  65412 cagagagcatgtaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcct 65476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 13250 - 13318
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaaga 103  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  13250 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 13318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 2286 - 2378
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctgga 127  Q
    |||| |||||||||||||  |||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||| ||  ||||||||||||    
T  2286 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctgga 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 15968 - 16040
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  15968 cagagagcatgttgaattctgtattttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 16040  T

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Target: scaffold0029 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 13258 - 13194
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  13258 cagagagcatgttgaattatgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 13194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 6697 - 6764
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  6697 cagagagcatgtcgaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaa 6764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 15298 - 15373
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtcta 86  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||    
T  15298 cagagagcatgtagaattctgtattttttacttttgagttgaaccttagatgtttttgagtgcttaaagatgtcta 15373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 10440 - 10502
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgc 73  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||    
T  10440 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgc 10502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 13411 - 13229
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatga 142  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||| |   |||||||||||||   ||| ||||||     
T  13411 tttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatg- 13313  T
Q  143 aacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta 226  Q
    || |||||  | |   ||||||||||||||  | ||| |||||| |||||||||||||  | ||||  ||||| ||||||||||    
T  13312 aatttttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtta 13229  T

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Target: scaffold0425 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 657 - 571
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttag 97  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| | ||||||||||||||||| |||| |||| || ||||||||||    
T  657 cagagagcatgttgaattctgtatttttgacttttgagttgaaccctagatgcttttgagtgcataaagatgtttattaatggttag 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 867 - 931
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  867 cagagagcatgtagaattatgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 10910 - 10970
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataat 91  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  10910 gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 224  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 6470 - 6557
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaac 122  Q
    |||| ||||||||| |||  ||||||||| ||| ||||||| |||||||||||||||| |||||||||| || ||||||  |||||||    
T  6470 ttttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

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Target: scaffold0106 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 1663 - 1575
Alignment:
Q  137 gaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
    |||| |||||| ||||| ||| | |||||||||| || | ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  1663 gaattaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 7640 - 7552
Alignment:
Q  137 gaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 225  Q
    |||| |||||| ||||| ||| | |||||||||| || | ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  7640 gaattaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 1758 - 1692
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttag 97  Q
    |||||||| |||||| | |||||  ||||||||||||| |||||| ||||||||||||| || ||||    
T  1758 gtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 7735 - 7669
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttag 97  Q
    |||||||| |||||| | |||||  ||||||||||||| |||||| ||||||||||||| || ||||    
T  7735 gtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 7669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 16130 - 16086
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||| |||||||| ||||| | |||||||||||||||||||    
T  16130 gtatttttgacttttgaattgaaccatagatgcttttgagtgcct 16086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 6081 - 6018
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||    
T  6081 agagagcatgtcgaattctgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 6018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 7276 - 7213
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||    
T  7276 agagagcatgtcgaattctgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 1393 - 1318
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtcta 86  Q
    |||||||||||||||||| | || |||| |||||||||||||| ||||||||||||||||||||| || |||||||    
T  1393 cagagagcatgtcgaattctataattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtcta 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 766 - 687
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataa 90  Q
    |||||||||||| ||| | ||||||||| |||||||||||||| ||||||||||||||||||||| || |||| ||||||    
T  766 cagagagcatgttgaaatctgtatttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataa 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 15901 - 15834
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  15901 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaa 15834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 27322 - 27259
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  27322 agagagcatgttgaattctgtattttttacttttgagttgaaccttagatgtttttgagtgcct 27259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 21265 - 21171
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaagattttgcgaactgtgtcgcacaagttg 255  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||| |||||||||| |||||| || |||||||| || ||| |||| |||||    
T  21265 cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgttgag-ttttgcgacctttgttgcacgagttg 21171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 21374 - 21301
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaaga 103  Q
    |||| |||| |||||||||||||| |||||||| |||| ||||||| |||||||||||||||| ||| ||||||    
T  21374 tgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaaga 21301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 10995 - 10842
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| |||||||| |||||||||||| ||||||| |||||||| |||||||||||   ||| ||  |||||||||||||   ||| |||||| || |    
T  10995 agttgaatcttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatg-aatt 10897  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||  | |   |||||||||||||| || ||| |||||||||||||||||||||    
T  10896 tttgtgagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 6072 - 5979
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||| |||||| ||||||  |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||||| ||  ||||||| |||||    
T  6072 ttttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaa 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 15472 - 15565
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||| |||||| ||||||| |||||||| |||||||||||||||||||| |||| ||| ||||||||||||  ||| ||  |||||||||||||    
T  15472 ttttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaa 15565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 2376 - 2304
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||| ||||| ||||| ||||||||| || ||||||||||| |||||||||||||||||||||||| ||||    
T  2376 cagagaacatgttgaattctgtatttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgt 2304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 1703 - 1767
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||||||||||||||||||    
T  1703 cagagagcatgtcgaattttgtaattttgacctttgagttgaaccttagatgcttttgagtgcct 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 1990 - 1926
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  1990 cagagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16740 - 16804
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| |||||||||||||||||||||    
T  16740 cagagagcatgtagaattctgtgtttttgacttttgagttgaagcttagatgcttttgagtgcct 16804  T

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Target: scaffold0210 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 21425 - 21489
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||||    
T  21425 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 21489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 29317 - 29381
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||||||||    
T  29317 cagagagcatgttgaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 29381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 3339 - 3275
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||  ||||||||| |||||||||||||| |||||||||||||||||||||    
T  3339 cagagagcatgttgaatcctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 3275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 7005 - 6941
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| |||||||||||||||||||||    
T  7005 cagagagcatgttgaattttgtttttttgacttttgagttgaaccttagatgcttttgagtgcct 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 15171 - 15099
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| | | |||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  15171 cagagagcatgttgaattctattttttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 15099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 24189 - 24114
Alignment:
Q  11 cagagagcatgtcgaattatg---tattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||   | ||||||||||||||||| || |||||||| ||||||||||||||| ||||    
T  24189 cagagagcatgttgaattctgtttttttttttacttttgagttaaaccttagatgtttttgagtgcctaaagatgt 24114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 39613 - 39538
Alignment:
Q  11 cagagagcatgtcgaattatg---tattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| ||   | ||||||||||||||||| || |||||||| ||||||||||||||| ||||    
T  39613 cagagagcatgttgaattctgtttttttttttacttttgagttaaaccttagatgtttttgagtgcctaaagatgt 39538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 44550 - 44486
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  44550 cagagagcatgttgaattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 44486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 6603 - 6536
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaa 78  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||||||| ||||||    
T  6603 cagagagcatgttgaattttgtatttttgacttttgagttgaaccttagatgtttttgagttcctaaa 6536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 889 - 824
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaa 77  Q
    ||||||||||| ||||| |||| |||| |||||||||||||| ||||||||||||||||| |||||    
T  889 agagagcatgttgaattctgtaattttgacttttgagttgaaccttagatgcttttgagtacctaa 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 7015 - 6923
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||| |||||||||||||  ||| |||| ||||||||||||  ||||||||||||||  ||||||||||||||||| ||  |||||||||||||    
T  7015 ttttgacttttgagttgatcctttgatg-ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaa 6923  T

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Target: scaffold0412 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 6038 - 6099
Alignment:
Q  14 agagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    ||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||||||||||    
T  6038 agagcatgttgaattctgtacttttgacttttgagttgaaccttagatgcttttgagtgcct 6099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 130386 - 130222
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattt 134  Q
    |||| |||||||||||||  ||| |||| |||||||||||| |||||||||| | ||| |||| |||||||  ||| ||  |||||||||||||   |||    
T  130386 ttttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagttt 130287  T
Q  135 tagaatgaaacttttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
     ||||||  | |||||| |||   |||| |||||||||  | ||||||||||||||||||||||||    
T  130286 aagaatg-gatttttgggaattacacctaaactcgccatggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 60479 - 60520
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    ||||||||||||| || ||| |||||||||||||||||||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 60520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 1119 - 1183
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||| |||| |||| |||| |||||||||  ||||||||||||||||||||    
T  1119 cagagagcatgtcgaattctgtagttttgacttgtgagttgaactttagatgcttttgagtgcct 1183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 18830 - 18770
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||||||  ||||| |||||||||||||| ||||||||| |||||||    
T  18830 cagagagcatgtcgaattatgagtttttgacttttgagttgaaccttagatgcctttgagt 18770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 18921 - 18985
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||||||||  |||  |||| |||||||||||||| |||||||||||||||||||||    
T  18921 cagagagcatgtcgaatcttgtgattttgacttttgagttgaaccttagatgcttttgagtgcct 18985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 35140 - 35200
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||| ||||||||| |||| |||| |||||||||||||| |||||||||||||||||    
T  35140 cagagagcttgtcgaattttgtaattttgacttttgagttgaaccttagatgcttttgagt 35200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 10615 - 10555
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaaga 103  Q
    ||||||||||  ||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  10615 tttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaaga 10555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 18740 - 18668
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||   |||||||| |||||||||||||| |||||||| ||||||||||||||| ||||    
T  18740 cagagagcatgtagaataccgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgt 18668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 30364 - 30428
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||||||||||| |||||  ||| |||| |||||||||||||| |||||||||||||||||||||    
T  30364 cagagagcatgttgaatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 30428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 682 - 741
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattg 106  Q
    ||||||| |||||||| |||||||||||| ||||||| |||||||| |||||||||||||    
T  682 agttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattg 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 43436 - 43519
Alignment:
Q  45 tgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||||| |||||||| |||||||||||| |||||||||||| ||| |||| |||||||  ||| ||  |||||||||||||    
T  43436 tgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 43519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 47356 - 47439
Alignment:
Q  45 tgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    ||||||||| |||||||| |||||||||||| |||||||||||| ||| |||| |||||||  ||| ||  |||||||||||||    
T  47356 tgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 47439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 10218 - 10280
Alignment:
Q  43 tttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    |||||| |||| |||||||| |||||||||||| |||||||||||||||| |||| |||||||    
T  10218 tttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagatt 10280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 1062 - 994
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttagga 99  Q
    |||||||| |||||||||||||| ||||||||  |||||||||   ||||||||||||| || ||||||    
T  1062 gtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattagga 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 10305 - 10347
Alignment:
Q  159 acctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||||||||||| || ||| |||||||||||||||||||||    
T  10305 acctgaactcgccaaagcgagtagaggctctcgcctcgcgagt 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 201
Target Start/End: Original strand, 7711 - 7864
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaaagattttagaatgaaact 146  Q
    ||||||| |||||||| ||||||||| || ||||||| |||||||| |||||||||||   ||| ||  ||||||||| |||   ||| |||||| || |    
T  7711 agttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatg-aatt 7809  T
Q  147 tttggaaatctgacctgaactcgccacagagagcagaggctctcgcctcgcgagt 201  Q
    |||||   |   |||||||||||||| || ||| |||||||||||||||||||||    
T  7810 tttgggggttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 9322 - 9408
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttag 97  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| ||||||| |||| |  |||||| ||||| ||||    
T  9322 cagagagcatgtcgaattttgagtttttgacttttgagttgaaccttagatgcctttgagtacctataggtgtctactaatgattag 9408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 7080 - 7022
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    ||||||| |||||||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  7080 agttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagatt 7022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 14460 - 14402
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagatt 105  Q
    ||||||| |||||||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  14460 agttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagatt 14402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 15866 - 15963
Alignment:
Q  162 tgaactcgccacagagagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaagattttgcgaactgtgtcgcacaagttgtta 258  Q
    ||||||||||| || ||| | |||| ||||||||||||||  |||||  ||||| ||||||| ||| |||||||||| || |||||||||||||||||    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgtta 15963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 4927 - 4855
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||||||||||  | || |||| |||| |||||||||||||| |||| ||||||||||||||||||| ||||    
T  4927 cagagagcatgtgaagttctgtaattttgacttttgagttgaaccttaaatgcttttgagtgcctaaagatgt 4855  T

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Target: scaffold0342 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 6900 - 6960
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||| ||||||||| |||| |||| ||||| |||||||| |||||||||||||||||    
T  6900 cagagagcttgtcgaattttgtaattttgactttcgagttgaaccttagatgcttttgagt 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 4552 - 4624
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||| |||||| ||||| ||||||||| |||||||||||||| |||||||  |||||| |||||||| ||||    
T  4552 cagagcgcatgttgaattctgtatttttgacttttgagttgaaccttagatatttttgaatgcctaaagatgt 4624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 18072 - 18144
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    |||||||||||| ||||| | || |||| ||||| |||||||| |||||||| ||||||||||||||| ||||    
T  18072 cagagagcatgtagaattctataattttgactttagagttgaaccttagatgtttttgagtgcctaaagatgt 18144  T

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Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 227942 - 227878
Alignment:
Q  64 ttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||||||||||||||||||| |||||||| ||||||||||||  ||| ||  |||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaa 227878  T

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Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 24598 - 24658
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||  || ||  ||||| |||||||||||||| ||||||||| |||||||    
T  24598 cagagagcatgtcgttttctgagtttttaacttttgagttgaaccttagatgcctttgagt 24658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 10214 - 10274
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||||| |||||||    
T  10214 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 10274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 70272 - 70232
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  70272 ttttgacttttgagttgaaccttagatgtttttgagtgcct 70232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 12462 - 12381
Alignment:
Q  47 agttgaaacttagatgcttttgagtgcctaaacatgtctaataatggttaggaaagattggagaatggaattgaacctggaa 128  Q
    |||||| | ||||||| ||||||||| || ||||||| |||||||| ||||||||||||  ||| ||  |||||||||||||    
T  12462 agttgatatttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaa 12381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 2277 - 2217
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| |||||  ||| |||  |||||||||||||| |||||||||||||||||    
T  2277 cagagagcatgttgaatttcgtaatttggacttttgagttgaaccttagatgcttttgagt 2217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 807 - 747
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| |||||  ||| |||  |||||||||||||| |||||||||||||||||    
T  807 cagagagcatgttgaatttcgtaatttggacttttgagttgaaccttagatgcttttgagt 747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 11430 - 11482
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgc 63  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| |||||||||    
T  11430 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatgc 11482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 2065 - 2125
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||| ||| ||||||||| |||| |||| ||||||| |||||| |||||||||||||||||    
T  2065 cagacagcttgtcgaattttgtaattttgacttttgcgttgaaccttagatgcttttgagt 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 9925 - 9985
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||| ||| ||||||||| |||| |||| ||||||| |||||| |||||||||||||||||    
T  9925 cagacagcttgtcgaattttgtaattttgacttttgcgttgaaccttagatgcttttgagt 9985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 45594 - 45534
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| |||||  ||| |||  |||||||||||||| |||||||||||||||||    
T  45594 cagagagcatgttgaatttcgtaatttggacttttgagttgaaccttagatgcttttgagt 45534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 19664 - 19604
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| ||  ||||| |||||||||||||| ||||||| | |||||||    
T  19664 cagagagcatgtcgaattctgagtttttgacttttgagttgaaccttagatacctttgagt 19604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 66045 - 66105
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| |   ||||| |||||||||||||| ||||||||| |||||||    
T  66045 cagagagcatgtcgaattctaagtttttgacttttgagttgaaccttagatgcctttgagt 66105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 71186 - 71246
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||||||||| |   ||||| |||||||||||||| ||||||||| |||||||    
T  71186 cagagagcatgtcgaattctaagtttttgacttttgagttgaaccttagatgcctttgagt 71246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 14943 - 15003
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||||||||||||    
T  14943 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgcttttgagt 15003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 190923 - 190972
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||| ||||||||||| || |||||||| ||||||||||||||| ||||    
T  190923 tttttgacttttgagttcaaccttagatgtttttgagtgcctaaagatgt 190972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 192626 - 192675
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgt 83  Q
    ||||| ||||||||||| || |||||||| ||||||||||||||| ||||    
T  192626 tttttgacttttgagttcaaccttagatgtttttgagtgcctaaagatgt 192675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 19485 - 19525
Alignment:
Q  31 gtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||  |||||||||||||| |||||||||||||||||    
T  19485 gtattttggacttttgagttgaaccttagatgcttttgagt 19525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 2325 - 2247
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataa 90  Q
    |||||| ||||| ||||| ||||| ||  |||||||||||||| ||||||||||||| ||||||| || |||| ||||||    
T  2325 cagagaacatgttgaattctgtatgttg-acttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataa 2247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 10007 - 9929
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagtgcctaaacatgtctaataa 90  Q
    |||||| ||||| ||||| ||||| ||  |||||||||||||| ||||||||||||| ||||||| || |||| ||||||    
T  10007 cagagaacatgttgaattctgtatgttg-acttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataa 9929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 806 - 769
Alignment:
Q  34 ttttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  806 tttttgacttttgagttgaaccttagatgcttttgagt 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 6489 - 6432
Alignment:
Q  14 agagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||||| ||  ||||| |||||||||||||| |||||| || |||||||    
T  6489 agagcatgtcgaattctgagtttttgacttttgagttgaaccttagacgcctttgagt 6432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 17361 - 17402
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||| |||| |||||||||||||| |||||||||||||||||    
T  17361 tgtaattttgacttttgagttgaaccttagatgcttttgagt 17402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 20464 - 20419
Alignment:
Q  30 tgtattttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||| |||||||||||||| |||||||| ||||||||||||    
T  20464 tgtagttttgacttttgagttgaaccttagatgtttttgagtgcct 20419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 2304 - 2353
Alignment:
Q  12 agagagcatgtcgaattatgtattttttacttttgagttgaaacttagat 61  Q
    ||||||||||||||||| ||  ||||| |||||||||||||| |||||||    
T  2304 agagagcatgtcgaattctgagtttttgacttttgagttgaaccttagat 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 1913 - 1853
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  |||||||||||||| |||||||| ||||||||    
T  1913 cagagagcatgttgattttcgtattttggacttttgagttgaaccttagatgtttttgagt 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 26877 - 26837
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  26877 ttttgacttttgagttgaaccttagatgtttttgagtgcct 26837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 3854 - 3914
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    |||||||||||| || ||  |||||||  ||||||||||||||  ||||||||||||||||    
T  3854 cagagagcatgttgattttcgtattttggacttttgagttgaactttagatgcttttgagt 3914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 36034 - 36074
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  36034 ttttgacttttgagttgaaccttagatgtttttgagtgcct 36074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 36934 - 36894
Alignment:
Q  35 tttttacttttgagttgaaacttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  36934 ttttgacttttgagttgaaccttagatgtttttgagtgcct 36894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 8576 - 8636
Alignment:
Q  11 cagagagcatgtcgaattatgtattttttacttttgagttgaaacttagatgcttttgagt 71  Q
    ||||||||||||  ||||  |||||||| || ||||||||||| |||||||| ||||||||    
T  8576 cagagagcatgtaaaattcggtatttttgacctttgagttgaaccttagatgtttttgagt 8636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  160 cctgaactcgccacagagagcagaggctctcgcctcgcgag 200  Q
    ||||||||||||| || ||| ||||||||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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