View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16307_high_19 (Length: 317)
Name: NF16307_high_19
Description: NF16307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16307_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 24 - 306
Target Start/End: Original strand, 42062752 - 42063034
Alignment:
| Q |
24 |
catcatcataccaatctgatcagctaagtaatgaacgtaactcagccttccgctggaagcatcccaactgaaatgaatacgaaggatgagggggagggtg |
123 |
Q |
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| T |
42062752 |
catcatcataccaatctgatcagctaagtaatgaacgtaactcagccttccgctggaagcatcccaactgaaatgaatacgaaagatgagggggagggtg |
42062851 |
T |
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| Q |
124 |
agttacttcacattaatgggaaacctatcaagggaaattttagactttgaaccaaaagaacttcgcattgcactctttcttcactttatcctcttattgc |
223 |
Q |
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|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
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| T |
42062852 |
agttgcttcacaataatgggaaacctatcaagggaaattttagactttgaaccaaaagaactttgccttgcactctttcttcactttatcctcttattgc |
42062951 |
T |
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| Q |
224 |
tgcaaagatccctctccagtgtcaactatcactgagatatggagaatcagtactagttatgtgatccattacacaaactcatt |
306 |
Q |
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| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42062952 |
tacaaagatccctctccagtgtcaactatcactgagatatggagaatcagtactagttatgtgatccattacacaaactcatt |
42063034 |
T |
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