View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16307_high_24 (Length: 305)
Name: NF16307_high_24
Description: NF16307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16307_high_24 |
 | |
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| [»] scaffold0097 (1 HSPs) |
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| [»] chr2 (7 HSPs) |
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| [»] chr8 (5 HSPs) |
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| [»] chr7 (6 HSPs) |
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| [»] scaffold0850 (1 HSPs) |
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| [»] scaffold0013 (1 HSPs) |
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| [»] scaffold0184 (1 HSPs) |
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| [»] scaffold0078 (1 HSPs) |
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| [»] scaffold1868 (1 HSPs) |
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Alignment Details
Target: scaffold0097 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 10 - 305
Target Start/End: Original strand, 26252 - 26547
Alignment:
| Q |
10 |
aagaatatggtgctcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggagg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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|
| T |
26252 |
aagagtatggtgctcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggagcaccccacagacgagggagg |
26351 |
T |
|
| Q |
110 |
aaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacat |
209 |
Q |
| |
|
| |||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
26352 |
agatgctggagagagatacgagaaggagttgttgtgtgaggagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacat |
26451 |
T |
|
| Q |
210 |
cgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatcttga |
305 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |
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|
| T |
26452 |
cgacttggtatatcttgattgtatggtggacctgaatgcaattgggaagtgatcatggggagggatgaccttagcttacctatatgattatcttga |
26547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 10 - 305
Target Start/End: Original strand, 20722423 - 20722718
Alignment:
| Q |
10 |
aagaatatggtgctcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggagg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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|
| T |
20722423 |
aagagtatggtgctcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggagcaccccacagacgagggagg |
20722522 |
T |
|
| Q |
110 |
aaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacat |
209 |
Q |
| |
|
| |||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
20722523 |
agatgctggagagagatacgagaaggagttgttgtgtgaggagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacat |
20722622 |
T |
|
| Q |
210 |
cgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatcttga |
305 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20722623 |
cgacttggtatatcttgattgtatggtggacctgaatgcaattgggaagtgatcatggggagggatgaccttagcttacctatatgattatcttga |
20722718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 29901085 - 29901371
Alignment:
| Q |
15 |
tatggtgctcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatg |
114 |
Q |
| |
|
||||||||||||||||||||| | || ||||||| ||||||||| | | ||||| |||||||||| ||||| |||| ||| |||||||||| ||| |
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|
| T |
29901085 |
tatggtgctcatattagttatcccacactgaagcggctttatgaagctcacctgacaaaggctagacgactggaggaccc-acaatcgagggaggagatg |
29901183 |
T |
|
| Q |
115 |
ctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgact |
214 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
29901184 |
ctggagagagataggaggaggcagtggtgtgtgaggagttttcttctatatctcgccggtagtgcgttgttcactaacaaaacgaacagacacatcgact |
29901283 |
T |
|
| Q |
215 |
tggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatct |
302 |
Q |
| |
|
|| |||||||||||||||||| |||| || | |||||||| ||||||||| |||||||||||| ||| ||||||| || |||||||| |
|
|
| T |
29901284 |
tgatatatcttgattgtatggcggacttgcaggcaattgggaagtgatcaaggggagggatgactttatcttacctgtacgattatct |
29901371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 72 - 302
Target Start/End: Complemental strand, 695922 - 695693
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtc |
171 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||||||| | ||| ||||||| ||||||||| |||||||||| |||||| ||||||||||| || |
|
|
| T |
695922 |
gaggctagacggctggaggaccc-acatacgagggagcagctgcatgagagaggcaggaggagggtgtggtgtgtgaggagtttccttttatatctcgtt |
695824 |
T |
|
| Q |
172 |
ggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggag |
271 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| || | || ||||||||||| |||| ||||| |
|
|
| T |
695823 |
ggttgtgcgttgttcactaacaaaacgaacagacacatcaacttgatatatcttgattgtatggcggacttgcaggcgattggaaagtggtcatggggag |
695724 |
T |
|
| Q |
272 |
ggatgaccttagcttacctatatgattatct |
302 |
Q |
| |
|
|||||||||||||||||| || |||||||| |
|
|
| T |
695723 |
ggatgaccttagcttacccctacgattatct |
695693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 290
Target Start/End: Original strand, 4173675 - 4173941
Alignment:
| Q |
23 |
tcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagag |
122 |
Q |
| |
|
|||||| |||||| | |||||||||| |||||||| || ||||| |||||||||||||||||| |||| ||| | ||||||||| ||| |||||| |
|
|
| T |
4173675 |
tcatatcagttatcccacattgaagcgggtttatgaagaccacctgacagaggctagacggctggacgaccc-acatatgagggaggagttgcaggagag |
4173773 |
T |
|
| Q |
123 |
agataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatat |
222 |
Q |
| |
|
|| |||||||| |||||||||| |||||||||| ||||||| |||||| ||||| ||||||||||||||||||| |||||||||||| || ||||| |
|
|
| T |
4173774 |
agccaggaggagacagtggtgtgtgaggagttttcttctatatctcgtcggttgtgcgctgttcactaacaaaacgaatagacacatcgacatgatatat |
4173873 |
T |
|
| Q |
223 |
cttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
|||||||||||||||||| || | | ||||| ||||| |||| |||||||||| ||||||| ||||| |
|
|
| T |
4173874 |
cttgattgtatggtggacttgcagacgattgggaagtggtcatggggagggatggccttagcgtacct |
4173941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 31502296 - 31502100
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||||| ||||||||| ||| |||||||| |||| |||| |||||||||| |||||| ||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
31502296 |
ccacagatgagggaggagctgcaggagagaggcaggatgagggtgtggtgtgtgaggagtttccttctatatctcgtcggttttgcgttgttcactaaca |
31502197 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| |||| |||| || | || |||| ||||| |||| |||||||||||||||||||||||| |
|
|
| T |
31502196 |
aaacgaacagatacatcgacttgatatatcttgattgcatggcggacttgcaggcgattgagaagtggtcatggggagggatgaccttagcttacct |
31502100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 139 - 288
Target Start/End: Original strand, 26390634 - 26390782
Alignment:
| Q |
139 |
tggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtgg |
238 |
Q |
| |
|
|||||||||| |||||| ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
26390634 |
tggtgtgtgaggagtttccttctatatctcgtcggttgtgcgttgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatgacgg |
26390733 |
T |
|
| Q |
239 |
acctgaatgcaattggaaagtgatcatagggagggatgaccttagcttac |
288 |
Q |
| |
|
|| || | || ||||| ||||| ||| |||||||||| || |||||||| |
|
|
| T |
26390734 |
acttgcaggcgattgggaagtggtca-ggggagggatggccctagcttac |
26390782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 21832518 - 21832597
Alignment:
| Q |
224 |
ttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatctt |
303 |
Q |
| |
|
||||||||||||||||| || | || ||||| ||||| |||| || || ||||||||||||||||||||||||||||||| |
|
|
| T |
21832518 |
ttgattgtatggtggacttgtaggcgattgggaagtggtcatgggaagagatgaccttagcttacctatatgattatctt |
21832597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 303
Target Start/End: Complemental strand, 13827623 - 13827336
Alignment:
| Q |
15 |
tatggtgctcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatg |
114 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||| ||||||||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
13827623 |
tatggtgctcatattagttataccgcactgaagcggctttatgaatcccacctgacagaggctagacggctggagaaccc-acaaacgagggaggaaatg |
13827525 |
T |
|
| Q |
115 |
ctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgact |
214 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
13827524 |
ctggagagaaataggaggaggagttggtgtgtgaggagttttcttttatatctcgttggtagtgcgttgttcactaacaaaacgaacagacaaattgact |
13827425 |
T |
|
| Q |
215 |
tggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatctt |
303 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| ||| | ||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13827424 |
tggtatatcttgattgtatgacagacttgaatgctatttggaagtggtcatggggagggatgaccttagcttacctatatgattatctt |
13827336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 43 - 302
Target Start/End: Complemental strand, 47868196 - 47867938
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||||||||||||| ||| ||||| ||||||||||||||||| |||| || ||||||||||| |||| |||||||| ||||||||| |||| |
|
|
| T |
47868196 |
tgaagcgactttatgaagcccacctgacagaggctagacggctggaggacccg-catacgagggaggagatgcaggagagaggcaggaggaggcagtggt |
47868098 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||| | |
|
|
| T |
47868097 |
gtgtggagagttttcttctatatctcgtcggtagtgcgctgttcactaacaaaacgaacaaacacatcaacttgatatatcttgattgtatggcggactt |
47867998 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatct |
302 |
Q |
| |
|
| | | |||| ||||| |||| |||||||||||||||||||||||| || |||||||| |
|
|
| T |
47867997 |
gcaggtgattgtgaagtggtcatggggagggatgaccttagcttacctgtacgattatct |
47867938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 43 - 290
Target Start/End: Original strand, 45033568 - 45033814
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || ||||| |||| |||||||||||| |||| ||| ||||||||||| ||| |||||||| |||||||| |||| |
|
|
| T |
45033568 |
tgaagcgggtttatgaagaccacctgacagagggtagacggctggaggaccc-acaaacgagggaggagttgcaggagagagccaggaggagacagtggt |
45033666 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | |
|
|
| T |
45033667 |
gtgtgaggagttttcttctatatctcgtcggttgtgcgttgttcactaacaaaacgaacagacacatcgacttggtatattttgattgtatggcggactt |
45033766 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
| | | ||||| ||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
45033767 |
gcagacgattgggaagtggttatagggagggatgaccttagcgtacct |
45033814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 72 - 290
Target Start/End: Original strand, 48163735 - 48163952
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtc |
171 |
Q |
| |
|
||||||||| ||||||| |||| |||||||||||||||| ||| |||||||| |||||||| |||||| ||| |||||||||| ||||||| || |
|
|
| T |
48163735 |
gaggctagatggctggaggaccc-acagacgagggaggaattgcaggagagagccaggaggagacagtggtgtatgaggagttttcttctatatctcgtt |
48163833 |
T |
|
| Q |
172 |
ggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggag |
271 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || | || ||||| ||||| |||| ||||| |
|
|
| T |
48163834 |
ggttgtgcgttgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggcggacttgcaggcgattgggaagtggtcatggggag |
48163933 |
T |
|
| Q |
272 |
ggatgaccttagcttacct |
290 |
Q |
| |
|
||||| ||||||| ||||| |
|
|
| T |
48163934 |
ggatggccttagcgtacct |
48163952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 275
Target Start/End: Original strand, 18907137 - 18907339
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtc |
171 |
Q |
| |
|
||||| ||||||||||| |||| ||||||||||||||| ||| |||||||| ||||||||| |||||||||| |||||||||| ||||||| ||| |
|
|
| T |
18907137 |
gaggcaagacggctggaggaccc-acagacgagggaggagctgcaggagagagttaggaggagacagtggtgtgtgaggagttttcttctatatctcgtc |
18907235 |
T |
|
| Q |
172 |
ggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggag |
271 |
Q |
| |
|
||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| || | || ||| | ||||| |||| ||||| |
|
|
| T |
18907236 |
ggttgtgcgttgttcactaacaaaacgaacatacacatcgacttgatatatcttgattgtatggcggacttgcaggcgattcggaagtggtcatggggag |
18907335 |
T |
|
| Q |
272 |
ggat |
275 |
Q |
| |
|
|||| |
|
|
| T |
18907336 |
ggat |
18907339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 290
Target Start/End: Complemental strand, 181543 - 181297
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || ||||| |||||||||||||||||| | || ||| |||| |||||| ||| |||||||| ||||||||| |||| |
|
|
| T |
181543 |
tgaagcgggtttatgaagaccacctgactgaggctagacggctggaggagcc-acatacgaaggaggagctgcaggagagaggcaggaggagggtgtggt |
181445 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||| | |||||| ||| ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| | |
|
|
| T |
181444 |
gtgtcaggagtttccttctatatctcgtcggttgtgcgttgttcactaacaaaatgaacagacacatcgacttgatatatcttgattgtatgacggactt |
181345 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
| | || ||||| ||||| |||| ||||||||| ||||||||||||| |
|
|
| T |
181344 |
gcaggcgattgggaagtggtcatggggagggattgccttagcttacct |
181297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 290
Target Start/End: Complemental strand, 18943993 - 18943727
Alignment:
| Q |
23 |
tcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagag |
122 |
Q |
| |
|
|||||| |||||| | |||||||||| |||||||| || |||||| ||||||||||||||||| |||| | |||||||||||| ||| |||||| |
|
|
| T |
18943993 |
tcatatcagttatcccacattgaagcgggtttatgaagaccacctgatagaggctagacggctggaggaccc-attgacgagggaggagctgcaggagag |
18943895 |
T |
|
| Q |
123 |
agataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatat |
222 |
Q |
| |
|
|| ||||| || |||||||||| |||||| ||| ||||||| |||| | ||| |||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
18943894 |
agccaggagaagacagtggtgtgtgaggagtttgcttctatatctcgtcgattgtgtgttgttcacttacaaaacgaacagacacatcgacttgatatat |
18943795 |
T |
|
| Q |
223 |
cttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
||||||||||||| |||| || | || ||||| | ||| |||| |||||||||| ||||||| ||||| |
|
|
| T |
18943794 |
cttgattgtatggcggacttgcaggcgattgggatgtggtcatggggagggatggccttagcgtacct |
18943727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 72 - 290
Target Start/End: Original strand, 38110059 - 38110276
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtc |
171 |
Q |
| |
|
||||||||||||||||| | || ||||||||||||||| ||| || |||| ||||||||| |||||||||| |||||| ||| ||||| | ||| |
|
|
| T |
38110059 |
gaggctagacggctggaggagcc-acagacgagggaggagttgcaagaaagaggcaggaggagggtgtggtgtgtgaggagtttccttctatatttcgtc |
38110157 |
T |
|
| Q |
172 |
ggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggag |
271 |
Q |
| |
|
||| ||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| || | || ||||| ||||| |||| |||| |
|
|
| T |
38110158 |
ggttgtgcgctgttcactaacaaaatgaacagacacatcaacttgatatatcttgattgtatgacggacttgtaggcgattgggaagtggtcatgtggag |
38110257 |
T |
|
| Q |
272 |
ggatgaccttagcttacct |
290 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
38110258 |
ggatgaccttagcttacct |
38110276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 43 - 235
Target Start/End: Original strand, 8079 - 8270
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| ||| || || ||||||||||||||||| |||| ||||||||||||||| ||| |||||||| |||||||| |||| |
|
|
| T |
8079 |
tgaagcgggtttatgaagcccaccagacagaggctagacggctggaggaccc-acagacgagggaggagctgcaggagagagtcaggaggagacagtggt |
8177 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatgg |
235 |
Q |
| |
|
|||| | |||||| ||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
8178 |
gtgtcaggagtttccttctatatctcgtcggttgtgcgatgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgcatgg |
8270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 121; Significance: 5e-62; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 93 - 305
Target Start/End: Complemental strand, 23714716 - 23714504
Alignment:
| Q |
93 |
cccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaac |
192 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| || ||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
23714716 |
cccacagttgagggaggagatgctggagagagatatgaggaggagttggtgtgtgaggatttttcttctatatctcgtcggtagtgcgttgttcactaac |
23714617 |
T |
|
| Q |
193 |
aaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctat |
292 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||| ||||||| ||| || |||| ||||| ||||| |||| |||||||||||||||||||||||| | |
|
|
| T |
23714616 |
aaaacgaacagacacatcaacttaatatatcttgactgtatggcagacttgcatgcgattgggaagtggtcatggggagggatgaccttagcttaccttt |
23714517 |
T |
|
| Q |
293 |
atgattatcttga |
305 |
Q |
| |
|
||| |||||||| |
|
|
| T |
23714516 |
atgggtatcttga |
23714504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 41268736 - 41268996
Alignment:
| Q |
23 |
tcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagag |
122 |
Q |
| |
|
||||||||||||| | || ||||| | |||||||| || ||||| ||||||||||||||||| |||| ||||||||||||||| ||| |||||| |
|
|
| T |
41268736 |
tcatattagttatcccacactgaagtgggtttatgaagaccacctgacagaggctagacggctggaggaccc-acagacgagggaggagctgcaggagag |
41268834 |
T |
|
| Q |
123 |
agataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatat |
222 |
Q |
| |
|
|| |||||||| |||||||||| |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
41268835 |
agccaggaggagacaatggtgtgtgaggagttttcttctatatctcgtcggttgtgcgctgttcactaacaaaacgaacagacacatcgacttgatatat |
41268934 |
T |
|
| Q |
223 |
cttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagc |
284 |
Q |
| |
|
||||||||||||| |||| || | || ||||| ||||| |||| |||||| ||| ||||||| |
|
|
| T |
41268935 |
cttgattgtatggcggacttgcaggcgattgggaagtggtcatggggaggaatggccttagc |
41268996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 118 - 290
Target Start/End: Complemental strand, 42096919 - 42096747
Alignment:
| Q |
118 |
gagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttgg |
217 |
Q |
| |
|
||||||| ||||||||| |||||||||| | |||| ||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42096919 |
gagagaggcaggaggagggtgtggtgtgtgaggggtttccttctatatctcgtcggttgcgcgttgttcactaacaaaacgaacagacacatcgacttga |
42096820 |
T |
|
| Q |
218 |
tatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
|||||||||||||||||| | || || | || ||||| |||||||||| | |||||||||||||||||||||| |
|
|
| T |
42096819 |
tatatcttgattgtatggcgaacttgcaggcgattgggaagtgatcatggagagggatgaccttagcttacct |
42096747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 44117072 - 44116872
Alignment:
| Q |
102 |
gagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaac |
201 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||| |||||||||| |||||| ||| ||||||| |||||| ||||| |||||||||||||||||||| |
|
|
| T |
44117072 |
gagggaggagctgcaggagagaggcaggaggagggtgtggtgtgtgaggagtttccttctatatctcgtcggttgtgcgctgttcactaacaaaacgaac |
44116973 |
T |
|
| Q |
202 |
agacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatc |
301 |
Q |
| |
|
| ||||||||||||| ||||||||||||| | || |||| || | || ||||| ||||| |||| |||||||||||||||||||||| | || ||||||| |
|
|
| T |
44116972 |
atacacatcgacttgatatatcttgattgcacggcggacttgcaggcgattgggaagtggtcatggggagggatgaccttagcttacttgtacgattatc |
44116873 |
T |
|
| Q |
302 |
t |
302 |
Q |
| |
|
| |
|
|
| T |
44116872 |
t |
44116872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 290
Target Start/End: Complemental strand, 20478538 - 20478348
Alignment:
| Q |
100 |
acgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacga |
199 |
Q |
| |
|
||||||||||| ||| |||||||| | ||||||| |||| ||| | |||||| ||| ||||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
20478538 |
acgagggaggagctgcaggagagaggcatgaggagggtgtggtatgtcaggagtttccttctatatctcgttggtggtgcgttgttcactaacaaaacga |
20478439 |
T |
|
| Q |
200 |
acagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||| || | || ||||| ||||| || | |||||||||| ||||||||||||| |
|
|
| T |
20478438 |
acagacacatcgacttgatatatcttgattgtatggctgacttgcaggcgattgggaagtggtcttggggagggatggccttagcttacct |
20478348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 93 - 305
Target Start/End: Complemental strand, 11407842 - 11407630
Alignment:
| Q |
93 |
cccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaac |
192 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||| |||||||||||||||||||| |||||||||| | ||||| |||||||||||||| ||||||||| |
|
|
| T |
11407842 |
cccacagacgagggaggagcggctggagagacatatgaggaggagttggtgtgtgaggagttttcttctttatctcgtcggtagtgcgttattcactaac |
11407743 |
T |
|
| Q |
193 |
aaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctat |
292 |
Q |
| |
|
|||| ||||||| ||||| ||||| ||||||||||||||||| | || || |||| ||||| ||||| |||| ||||||||||||| |||||||||||| |
|
|
| T |
11407742 |
aaaatgaacagagacatccacttgatatatcttgattgtatgacgcacttggatgctattgggaagtggtcatggggagggatgaccctagcttacctat |
11407643 |
T |
|
| Q |
293 |
atgattatcttga |
305 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
11407642 |
atgattattttga |
11407630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 15 - 303
Target Start/End: Complemental strand, 28508758 - 28508471
Alignment:
| Q |
15 |
tatggtgctcatattagttatactgcattgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatg |
114 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||||| | ||||| || |||||||||||||| |||| |||||||| ||| | |
|
|
| T |
28508758 |
tatggtgctcatattagttatcctgcactgaagcgactttatgaggagcacctgacagaagctagacggctggaagaccc-acagacgatggaatggccg |
28508660 |
T |
|
| Q |
115 |
ctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgact |
214 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||||| | |
|
|
| T |
28508659 |
gtggagagagataggaggaggcattggtatgtgaggagttttcttctatatctcatcggtagtgcgctgttcactaacaaaacgaacggacacatcaatg |
28508560 |
T |
|
| Q |
215 |
tggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatctt |
303 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||| ||||| ||||| |||| || |||||||| ||||||||| | |||||||||||| |
|
|
| T |
28508559 |
tgatatatcttgattgtatggtggacttgaatgcgattgggaagtggtcatgggtagggatgaatttagcttacatgtatgattatctt |
28508471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 43 - 290
Target Start/End: Complemental strand, 46527626 - 46527380
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || ||||| |||||||||||||||||| |||| ||||||||||||||| ||| |||||||| |||||||| |||| |
|
|
| T |
46527626 |
tgaagcgggtttatgaagaccacctgacagaggctagacggctggacgaccc-acagacgagggaggagctgcaggagagagccaggaggagacagtggt |
46527528 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||||| |||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
46527527 |
gtgtgaggagttttcttctatatctcgtcggttgtgcgatgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggcagactt |
46527428 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
| | || ||||| ||||| |||| |||||||||| ||||||| ||||| |
|
|
| T |
46527427 |
gcaggcgattgggaagtggtcatggggagggatggccttagcgtacct |
46527380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 288
Target Start/End: Original strand, 10553537 - 10553752
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtc |
171 |
Q |
| |
|
||||||||||||||||| | || ||| |||||||||| ||| |||||||| | ||||||| |||||||| | |||||| ||| ||||||| || |
|
|
| T |
10553537 |
gaggctagacggctggaggagcc-acattcgagggaggagctgcaggagagaggcatgaggagggtgtggtgtgtcaggagtttccttctatatctcgtt |
10553635 |
T |
|
| Q |
172 |
ggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggag |
271 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| || | || ||||| ||||| | || ||||| |
|
|
| T |
10553636 |
ggttgtgcgttgttcactaacaaaacgaacagacacatcgacttgatttatcttgattgtatggctgacttgcaggcgattgggaagtggtaatggggag |
10553735 |
T |
|
| Q |
272 |
ggatgaccttagcttac |
288 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
10553736 |
ggatggccttagcttac |
10553752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 290
Target Start/End: Original strand, 41963350 - 41963471
Alignment:
| Q |
169 |
gtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagg |
268 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||| || | || |||| ||||| |||| || |
|
|
| T |
41963350 |
gtcggttgtgcgttgttcacgaacaaaacgaacagacacatcgacttgatacatcttgattgtatggcggacttgcaggcgattgagaagtggtcatggg |
41963449 |
T |
|
| Q |
269 |
gagggatgaccttagcttacct |
290 |
Q |
| |
|
|||||||| ||||||| ||||| |
|
|
| T |
41963450 |
gagggatggccttagcatacct |
41963471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 13907943 - 13907811
Alignment:
| Q |
44 |
gaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtg |
143 |
Q |
| |
|
|||||| ||||||||| || ||||| |||||||||||||||| |||| |||| |||||||||| |||||||||||||||| ||||||| ||||| |
|
|
| T |
13907943 |
gaagcggctttatgaagccgacctgacaaaggctagacggctggaggaccc-acagtcgagggaggagatgctggagagagatatgaggaggcagtggtg |
13907845 |
T |
|
| Q |
144 |
tgtgaagagttttcttttatatcttgtcggtagt |
177 |
Q |
| |
|
|| || |||||||||| ||||||| ||||||||| |
|
|
| T |
13907844 |
tgcgaggagttttcttctatatctcgtcggtagt |
13907811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 43 - 284
Target Start/End: Complemental strand, 42056547 - 42056307
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || |||||| |||||||||||||||||| |||| ||||||||||||||| ||| |||||||| | |||||| |||| |
|
|
| T |
42056547 |
tgaagcgggtttatgaagaccacctgatagaggctagacggctggacgaccc-acagacgagggaggagctgcaggagagagccacgaggagacagtggt |
42056449 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||||| |||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | |
|
|
| T |
42056448 |
gtgtgaggagttttcttctatatctcgtcggttgtacgttgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggcggactt |
42056349 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagc |
284 |
Q |
| |
|
| | || ||||| ||||| |||| |||||||||||||||||| |
|
|
| T |
42056348 |
gcaggcgattgggaagtggtcatggggagggatgaccttagc |
42056307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 43 - 293
Target Start/End: Original strand, 18241849 - 18242098
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || ||||| ||||||||||||||||| | || ||||||||||||||| | |||||||| ||||||||| |||| |
|
|
| T |
18241849 |
tgaagcgggtttatgaacaccacctgacagaggctagacggctggaggagcc-acagacgagggaggagctcaaggagagaggcaggaggagggtgtggt |
18241947 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||| |||||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
18241948 |
gtgtaaagagttttcttctatatctcgtcggttgtgcgctgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggctgactt |
18242047 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagcttacctata |
293 |
Q |
| |
|
| | | ||||| ||||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
18242048 |
gcaggagattgggaagtggtcatggggagggatggccttagcttacctata |
18242098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 94 - 302
Target Start/End: Original strand, 31386506 - 31386714
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||||||| |||||||||| |||||| ||| ||||||| |||||| ||||| |||||||||||| |
|
|
| T |
31386506 |
ccacagacgagggaggagctgcaggagagaggcaggaggagggtgtggtgtgtgaggagtttccttctatatctcgtcggtcgtgcgctgttcactaaca |
31386605 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctata |
293 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||| |||| | || || | || ||||| ||||| |||| |||||||||||||||| ||||||| || |
|
|
| T |
31386606 |
aaacgaacagacacatccacttgttatatcttgattgcatggcgaacttgcaggcgattgggaagtggtcatggggagggatgaccttaacttacctgta |
31386705 |
T |
|
| Q |
294 |
tgattatct |
302 |
Q |
| |
|
|||||||| |
|
|
| T |
31386706 |
cgattatct |
31386714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 43 - 302
Target Start/End: Complemental strand, 46193524 - 46193266
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || ||||| ||||||||||||||||| | || |||||| |||||| | ||| |||||||| |||| |||| | || |
|
|
| T |
46193524 |
tgaagcgggtttatgaacaccacctgacagaggctagacggctggaggagcc-acagacaagggagaagctgcaggagagaggcaggaagagggtgtagt |
46193426 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||||| |||||| ||| |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
46193425 |
gtgtgaggagtttccttctatatcttgtcggttgtgcgctgttaactaacaaatcgaacagacacatcgacttgatatatcttgattgtatggctgactt |
46193326 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatct |
302 |
Q |
| |
|
| | || ||||| ||||| |||| |||||||||| ||||||||||||| || |||||||| |
|
|
| T |
46193325 |
gcaggcgattgggaagtggtcatggggagggatggccttagcttacctgtacgattatct |
46193266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 27107183 - 27106988
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||||||| || ||||||| |||||| ||| ||||||| || ||| ||| |||||||||||||| |
|
|
| T |
27107183 |
ccacagacgagggaggatctgcaggagagaggcaggaggagggtgtgttgtgtgaggagtttccttctatatctcgttggttgtgtgttgttcactaaca |
27107084 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||| |||| |||| || | || ||||| ||||| |||| |||||||||||||||| ||||||| |
|
|
| T |
27107083 |
aaacaaacagacacatcgacttgatatatcttgattgcatggcggacttgcaggcgattggcaagtggtcat-gggagggatgaccttatcttacct |
27106988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 50913824 - 50914020
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||| ||||||||||| ||| ||||| || | ||||||| |||||||| | |||||| ||| ||||||| || ||| ||||| |||||||||||| |
|
|
| T |
50913824 |
ccacaaacgagggaggagctgcaggagataggcatgaggagggtgtggtgtgtcaggagtttccttctatatctcgttggttgtgcgatgttcactaaca |
50913923 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacct |
290 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||| || | || ||||| ||||| |||| |||||||||||||||||||||||| |
|
|
| T |
50913924 |
aaacgaacagacacatcgacttgatatatcttgattgtatggctgacttgcaggcgattgggaagtggtcatggggagggatgaccttagcttacct |
50914020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 94 - 302
Target Start/End: Complemental strand, 4913096 - 4912888
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||||||| |||||||||| |||||| ||| ||||||| |||||| ||||| |||||||||||| |
|
|
| T |
4913096 |
ccacagacgagggaggagctgcaggagagaggcaggaggagggtgtggtgtgtgaggagtttccttctatatctcgtcggttgtgcgctgttcactaaca |
4912997 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctata |
293 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||| |||| |||| || | || |||| ||||| |||| || ||||||| |||||| |||| | || |
|
|
| T |
4912996 |
aaacgaacaaacacatcgacttaatatatcttgattgcatggcggacttgtaggcggttgggaagtggtcatgggaagggatgcccttagtttacatgta |
4912897 |
T |
|
| Q |
294 |
tgattatct |
302 |
Q |
| |
|
|||||||| |
|
|
| T |
4912896 |
cgattatct |
4912888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 8645392 - 8645538
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
|||||| |||||||||| || ||||||||||||||||||| |||||||| | ||||||||| ||||||| || || || ||||||||||||| | |
|
|
| T |
8645392 |
ccacagtcgagggaggagttgaaggagagagataggaggagggagtggtgtgttaggagttttctgatatatctcgttgggtgtacgttgttcactaata |
8645491 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggac |
240 |
Q |
| |
|
| ||| ||| ||||| ||| | || ||||||| |||||||||||| |
|
|
| T |
8645492 |
agacggacaaacacaccgaggtaataaatcttgagtgtatggtggac |
8645538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 72 - 290
Target Start/End: Complemental strand, 9040090 - 9039873
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtc |
171 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||| ||| |||||||| |||||||| |||||||||| |||||||||||||||||| ||| |
|
|
| T |
9040090 |
gaggctagacggctggaggaccc-acagacgagggaggagctgcaggagagagccaggaggagacagtggtgtgtgaggagttttcttttatatctcgtc |
9039992 |
T |
|
| Q |
172 |
ggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggag |
271 |
Q |
| |
|
||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || | || ||||| ||||| |||| ||||| |
|
|
| T |
9039991 |
ggttgtgcgctgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggcggacttgcaggcgattgggaagtggtcatggggag |
9039892 |
T |
|
| Q |
272 |
ggatgaccttagcttacct |
290 |
Q |
| |
|
||||| ||||||| ||||| |
|
|
| T |
9039891 |
ggatggccttagcgtacct |
9039873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 67 - 284
Target Start/End: Original strand, 19875541 - 19875756
Alignment:
| Q |
67 |
tgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatc |
166 |
Q |
| |
|
|||| ||||||||||||||||| || | ||||||||||||||| ||| ||||||| |||||||| || ||||||| |||||||||| |||||| |
|
|
| T |
19875541 |
tgatagaggctagacggctggaggacac-acagacgagggaggagctgcaggagagatccaggaggagacaatgttgtgtgatgagttttcttctatatc |
19875639 |
T |
|
| Q |
167 |
ttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcata |
266 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || | |||||||| ||||| |||| |
|
|
| T |
19875640 |
tcgtcggttgtgcgttgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatgg-ggacttgcaggcaattgggaagtggtcatg |
19875738 |
T |
|
| Q |
267 |
gggagggatgaccttagc |
284 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
19875739 |
gggagggatggccttagc |
19875756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 288
Target Start/End: Complemental strand, 37981466 - 37981244
Alignment:
| Q |
65 |
cctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttata |
164 |
Q |
| |
|
|||||| ||||||||||||||||| | || || |||||||||||| | | |||||||| | ||||||| |||||||| | |||||| ||| |||| |
|
|
| T |
37981466 |
cctgatagaggctagacggctggaggagcc-acggacgagggaggatctacgggagagaggcatgaggagggtgtggtgtgtcaggagtttccttctata |
37981368 |
T |
|
| Q |
165 |
tcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatca |
264 |
Q |
| |
|
||| || ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || | || ||||| ||||| ||| |
|
|
| T |
37981367 |
tctcgttggttgtgcgttgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggctgacttgcaggcgattgggaagtggtca |
37981268 |
T |
|
| Q |
265 |
tagggagggatgaccttagcttac |
288 |
Q |
| |
|
| |||||||||||||||||||||| |
|
|
| T |
37981267 |
tggggagggatgaccttagcttac |
37981244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 302
Target Start/End: Original strand, 7252460 - 7252688
Alignment:
| Q |
73 |
aggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcg |
172 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||||| ||| |||||||| | ||||||| |||||||||| ||||| ||| ||||||| |||| |
|
|
| T |
7252460 |
aggctagacggctggaggaccc-acagacaagggaggagttgcaggagagaggcaagaggagggtgtggtgtgtgagaagtttccttctatatctcgtcg |
7252558 |
T |
|
| Q |
173 |
gtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagg |
272 |
Q |
| |
|
|| |||| |||| |||||||||| ||||||| ||||||||||| |||||||||||||||||| |||| || | || ||||| ||||| |||| |||||| |
|
|
| T |
7252559 |
gttgtgcactgtttactaacaaaatgaacagatacatcgacttgatatatcttgattgtatggcggacttgcaggcgattgggaagtggtcatggggagg |
7252658 |
T |
|
| Q |
273 |
gatgaccttagcttacctatatgattatct |
302 |
Q |
| |
|
|||||||||||||||| | || |||||||| |
|
|
| T |
7252659 |
gatgaccttagcttacatgtacgattatct |
7252688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0850 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0850
Description:
Target: scaffold0850; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 43 - 302
Target Start/End: Original strand, 1080 - 1338
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || ||||| ||||||||||||||||| |||| ||||| ||||||||| ||| |||||||| ||||||||| |||| |
|
|
| T |
1080 |
tgaagcgggtttatgaacaccacctgacagaggctagacggctggaggaccc-acagatgagggaggagctgcaggagagaggcaggaggagggtgtggt |
1178 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||||| |||||| ||| ||||||| |||||| || || ||||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||| | |
|
|
| T |
1179 |
gtgtgaggagtttccttctatatctcgtcggttgtacgatgttcactaacaagaagaacagacacatcgacttgatatatcttgattgtatggcggactt |
1278 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagcttacctatatgattatct |
302 |
Q |
| |
|
| | |||||||| ||||| |||| |||||||||||||||||||||| | || |||||||| |
|
|
| T |
1279 |
gcaggcaattgggaagtggtcatggggagggatgaccttagcttacatgtacgattatct |
1338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 93 - 302
Target Start/End: Complemental strand, 63926 - 63717
Alignment:
| Q |
93 |
cccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaac |
192 |
Q |
| |
|
|||||||||||||||||| |||| |||| ||||||| |||||||||||| ||| |||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
63926 |
cccacagacgagggaggagctgctatagaggaataggagaaggagttggtgtctgaggagttttcttctatatcttgtcggtagtatgctgttcactaac |
63827 |
T |
|
| Q |
193 |
aaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctat |
292 |
Q |
| |
|
||||| || |||||||| ||| || ||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||| |||||||| |||| |
|
|
| T |
63826 |
aaaacaaatagacacatggacgtgatatatcttgattgtatggtggacttgaatgtgattgggaagtggtcatgaggagggatgactttagcttatctat |
63727 |
T |
|
| Q |
293 |
atgattatct |
302 |
Q |
| |
|
||||| |||| |
|
|
| T |
63726 |
atgatcatct |
63717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 72 - 290
Target Start/End: Complemental strand, 12026060 - 12025843
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtc |
171 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||| ||| |||||||| ||||||||| | ||||||| |||||| ||| ||||||| || |
|
|
| T |
12026060 |
gaggctagacggctggaggaccc-acagacgagggaggagctgcaggagagaggcaggaggagggtgttttgtgtgaggagtttccttctatatctcgta |
12025962 |
T |
|
| Q |
172 |
ggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggag |
271 |
Q |
| |
|
| | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || | || ||||||||||| |||| ||||| |
|
|
| T |
12025961 |
gattgtgcgctgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggcggacttgcaggcgattggaaagtggtcatggggag |
12025862 |
T |
|
| Q |
272 |
ggatgaccttagcttacct |
290 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
12025861 |
ggatggccttagcttacct |
12025843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 284
Target Start/End: Complemental strand, 39390016 - 39389776
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| |||||||| || ||||| |||||||||||||||||| || ||| ||||||||||| ||| |||||||| |||||||| |||| |
|
|
| T |
39390016 |
tgaagcggatttatgaagaccacctgacagaggctagacggctggacgactg-acatacgagggaggagctgcaggagagagccaggaggagacagtggt |
39389918 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggacct |
242 |
Q |
| |
|
|||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | |||| | |
|
|
| T |
39389917 |
gtgtgaggagttttcttctatatctcgtcggttgtgcgttgttcactaacaaaacgaacatacacatcgacttgatatatcttgattgtatcgcggactt |
39389818 |
T |
|
| Q |
243 |
gaatgcaattggaaagtgatcatagggagggatgaccttagc |
284 |
Q |
| |
|
| | || ||||| ||||| |||| |||||||||| ||||||| |
|
|
| T |
39389817 |
gcaggcgattgggaagtggtcatggggagggatggccttagc |
39389776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 246
Target Start/End: Complemental strand, 11868551 - 11868407
Alignment:
| Q |
102 |
gagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaac |
201 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||| |||||||| | ||||||| | ||||||| ||||| ||| || ||||| ||||||| |||||| |
|
|
| T |
11868551 |
gagggaggagttgctaaagagagatagggggaggcagtggtgtgttaggagttttatcctatatctcgtcgggagtacgctgttcgctaacaagacgaac |
11868452 |
T |
|
| Q |
202 |
agacacatcgacttggtatatcttgattgtatggtggacctgaat |
246 |
Q |
| |
|
| ||||||| || | ||||||| || |||||||||||||||||| |
|
|
| T |
11868451 |
atacacatcaacatcatatatctggagtgtatggtggacctgaat |
11868407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 11868637 - 11868594
Alignment:
| Q |
15 |
tatggtgctcatattagttatactgcattgaagcgactttatga |
58 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||| |||||||| |
|
|
| T |
11868637 |
tatggtgctcatattacttatcctgcattgaagcggctttatga |
11868594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 23058397 - 23058593
Alignment:
| Q |
43 |
tgaagcgactttatgaatccctcctgattgaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggaggagttggt |
142 |
Q |
| |
|
||||||| ||||||||| ||| ||||| ||||||||| ||||||| |||| ||| |||||||||| ||| | ||||||||||||| |||| |||| |
|
|
| T |
23058397 |
tgaagcggctttatgaagcccacctgacagaggctagatggctggaggaccc-acaatcgagggaggagatgttagagagagataggaagaggcagtggt |
23058495 |
T |
|
| Q |
143 |
gtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatggtggac |
240 |
Q |
| |
|
|||||| | |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
23058496 |
gtgtgaggtgttttcttctatatctcgtcggtagtacgttgttcactaacaaaacgaacagacacatcgacttgatatatcttgattgtatggcggac |
23058593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 5619244 - 5619406
Alignment:
| Q |
72 |
gaggctagacggctggaccaccccacagacgagggaggaaatgctggagagagataggaggagg-agttggtgtgtgaagagttttcttttatatcttgt |
170 |
Q |
| |
|
|||||||||| |||||| |||| ||||||||||||||| ||| ||||||| |||||||| ||||| ||||||| |||||||||| ||||||| || |
|
|
| T |
5619244 |
gaggctagacagctggaggaccc-acagacgagggaggagctgcatgagagagccaggaggagacagttg-tgtgtgaggagttttcttctatatctcgt |
5619341 |
T |
|
| Q |
171 |
cggtagtgcgttgttcactaacaaaacgaacagacacatcgacttggtatatcttgattgtatgg |
235 |
Q |
| |
|
|||| || || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5619342 |
cggttgtacgctgttcactaacaaaatgaacagacacatcgacttgatatatcttgattgtatgg |
5619406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0184 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0184
Description:
Target: scaffold0184; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 94 - 301
Target Start/End: Complemental strand, 19371 - 19165
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||||||||||||||| ||| |||||||| | ||||||| |||||||| | |||||| ||| ||||||| |||||| ||||| |||||||||||| |
|
|
| T |
19371 |
ccacagacgagggaggagttgcaggagagaggcatgaggagggtgtggtgtgtcaggagtttccttctatatctcgtcggttgtgcgatgttcactaaca |
19272 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctata |
293 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||| |||| || | || ||||| ||||| |||| |||||| ||| ||||||| ||||| || |
|
|
| T |
19271 |
aaacgaacagacacatcgacttgatatatcttgattgcatggcggacttgcaggcgattgggaagtggtcatggggaggtatggccttagc-taccttta |
19173 |
T |
|
| Q |
294 |
tgattatc |
301 |
Q |
| |
|
|||||||| |
|
|
| T |
19172 |
tgattatc |
19165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 94 - 301
Target Start/End: Original strand, 53473 - 53679
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||||||||||||||| ||| |||||||| | ||||||| |||||||| | |||||| ||| ||||||| |||||| ||||| |||||||||||| |
|
|
| T |
53473 |
ccacagacgagggaggagttgcaggagagaggcatgaggagggtgtggtgtgtcaggagtttccttctatatctcgtcggttgtgcgatgttcactaaca |
53572 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctata |
293 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||| |||| || | || ||||| ||||| |||| |||||| ||| ||||||| ||||| || |
|
|
| T |
53573 |
aaacgaacagacacatcgacttgatatatcttgattgcatggcggacttgcaggcgattgggaagtggtcatggggaggtatggccttagc-taccttta |
53671 |
T |
|
| Q |
294 |
tgattatc |
301 |
Q |
| |
|
|||||||| |
|
|
| T |
53672 |
tgattatc |
53679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1868 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold1868
Description:
Target: scaffold1868; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 302
Target Start/End: Complemental strand, 792 - 584
Alignment:
| Q |
94 |
ccacagacgagggaggaaatgctggagagagataggaggaggagttggtgtgtgaagagttttcttttatatcttgtcggtagtgcgttgttcactaaca |
193 |
Q |
| |
|
||||||||||| ||||| ||| |||||||| | ||||||| |||||||| | ||| || ||| ||||||| |||||| ||||| |||||||||||| |
|
|
| T |
792 |
ccacagacgagtgaggagttgcaggagagaggcatgaggagggtgtggtgtgttaggagattccttctatatctcgtcggttgtgcgctgttcactaaca |
693 |
T |
|
| Q |
194 |
aaacgaacagacacatcgacttggtatatcttgattgtatggtggacctgaatgcaattggaaagtgatcatagggagggatgaccttagcttacctata |
293 |
Q |
| |
|
||||||| |||||| |||||||| ||||||||||||| |||| |||| | | || ||||| ||||| |||| |||||| ||| ||||||||||| | || |
|
|
| T |
692 |
aaacgaatagacacgtcgacttgatatatcttgattgcatggcggacttacaggcgattgggaagtggtcatggggaggtatggccttagcttactttta |
593 |
T |
|
| Q |
294 |
tgattatct |
302 |
Q |
| |
|
||||||||| |
|
|
| T |
592 |
tgattatct |
584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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