View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16308_low_5 (Length: 318)

Name: NF16308_low_5
Description: NF16308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16308_low_5
NF16308_low_5
[»] chr5 (39 HSPs)
chr5 (11-302)||(14868580-14868872)
chr5 (106-302)||(10461529-10461730)
chr5 (106-302)||(43197085-43197286)
chr5 (109-302)||(18786165-18786362)
chr5 (105-302)||(6542443-6542644)
chr5 (106-302)||(15969428-15969629)
chr5 (106-302)||(24491027-24491228)
chr5 (103-302)||(6497187-6497391)
chr5 (108-302)||(3598413-3598612)
chr5 (108-302)||(41137141-41137340)
chr5 (106-302)||(5933309-5933510)
chr5 (103-302)||(22394308-22394512)
chr5 (104-302)||(40588834-40589036)
chr5 (109-302)||(4122761-4122959)
chr5 (174-302)||(29991173-29991301)
chr5 (187-302)||(7133209-7133324)
chr5 (104-258)||(40589481-40589639)
chr5 (104-241)||(18785978-18786119)
chr5 (105-241)||(3598658-3598799)
chr5 (106-240)||(22394122-22394261)
chr5 (103-241)||(43196896-43197039)
chr5 (104-241)||(4122575-4122715)
chr5 (106-241)||(24490842-24490981)
chr5 (174-241)||(5933196-5933263)
chr5 (170-241)||(7133370-7133441)
chr5 (174-241)||(10461416-10461483)
chr5 (106-272)||(6497406-6497577)
chr5 (109-241)||(14868918-14869054)
chr5 (170-241)||(6542326-6542397)
chr5 (174-241)||(15969675-15969742)
chr5 (173-241)||(25329167-25329235)
chr5 (247-285)||(24640648-24640686)
chr5 (174-263)||(29991325-29991414)
chr5 (106-160)||(5933123-5933177)
chr5 (103-157)||(10461340-10461394)
chr5 (219-297)||(16416054-16416132)
chr5 (199-241)||(41137386-41137428)
chr5 (107-158)||(29991103-29991152)
chr5 (104-160)||(35928404-35928460)
[»] chr4 (56 HSPs)
chr4 (106-302)||(5720951-5721151)
chr4 (106-302)||(989259-989460)
chr4 (106-302)||(43749945-43750146)
chr4 (105-302)||(11021670-11021872)
chr4 (106-302)||(13683002-13683203)
chr4 (106-302)||(16959948-16960149)
chr4 (106-302)||(17107430-17107631)
chr4 (106-302)||(22487218-22487419)
chr4 (106-302)||(37815339-37815540)
chr4 (105-302)||(2184578-2184781)
chr4 (104-302)||(12792756-12792958)
chr4 (170-302)||(46480984-46481116)
chr4 (108-302)||(46081558-46081757)
chr4 (103-302)||(39385345-39385550)
chr4 (170-302)||(17865043-17865175)
chr4 (108-302)||(26314659-26314858)
chr4 (106-295)||(9301760-9301953)
chr4 (106-302)||(4712177-4712377)
chr4 (106-302)||(13493068-13493270)
chr4 (170-302)||(16491714-16491846)
chr4 (107-302)||(32592927-32593123)
chr4 (106-241)||(4712423-4712562)
chr4 (175-302)||(20045874-20046001)
chr4 (106-241)||(17865221-17865361)
chr4 (106-241)||(22487465-22487603)
chr4 (106-241)||(37815586-37815727)
chr4 (104-241)||(16959759-16959902)
chr4 (174-272)||(43750161-43750259)
chr4 (105-241)||(13492881-13493022)
chr4 (106-158)||(17864945-17864997)
chr4 (174-241)||(12792643-12792710)
chr4 (104-239)||(26314472-26314611)
chr4 (170-241)||(32592810-32592881)
chr4 (106-161)||(46480944-46480999)
chr4 (170-241)||(2184462-2184532)
chr4 (189-272)||(13683218-13683301)
chr4 (174-237)||(17107681-17107744)
chr4 (184-241)||(16491892-16491949)
chr4 (184-241)||(46481162-46481219)
chr4 (174-262)||(9301641-9301729)
chr4 (170-241)||(11021918-11021989)
chr4 (106-157)||(17107765-17107816)
chr4 (174-241)||(20046047-20046114)
chr4 (173-242)||(6100550-6100619)
chr4 (174-241)||(5721197-5721265)
chr4 (170-272)||(989144-989244)
chr4 (106-160)||(16491977-16492031)
chr4 (107-157)||(43750279-43750329)
chr4 (106-158)||(2184422-2184474)
chr4 (104-160)||(13073757-13073813)
chr4 (106-162)||(16491645-16491701)
chr4 (104-160)||(19321805-19321861)
chr4 (122-162)||(29420481-29420521)
chr4 (109-157)||(42239407-42239455)
chr4 (106-158)||(46481250-46481302)
chr4 (170-226)||(49097807-49097863)
[»] chr3 (45 HSPs)
chr3 (103-302)||(52835540-52835744)
chr3 (106-302)||(27934449-27934650)
chr3 (106-302)||(46962766-46962967)
chr3 (106-302)||(49499841-49500042)
chr3 (109-302)||(16056350-16056547)
chr3 (105-302)||(50645469-50645671)
chr3 (108-302)||(42093579-42093777)
chr3 (106-302)||(29838478-29838679)
chr3 (104-302)||(27284966-27285168)
chr3 (109-298)||(38807539-38807733)
chr3 (108-302)||(14546020-14546219)
chr3 (108-302)||(26582796-26582995)
chr3 (107-302)||(32315560-32315759)
chr3 (103-294)||(7029380-7029576)
chr3 (106-302)||(33162504-33162705)
chr3 (107-302)||(49121714-49121915)
chr3 (174-302)||(55092278-55092406)
chr3 (104-272)||(21323101-21323275)
chr3 (188-291)||(17110046-17110149)
chr3 (106-241)||(49500088-49500228)
chr3 (106-241)||(50645717-50645857)
chr3 (170-241)||(17109918-17109989)
chr3 (106-241)||(46962580-46962720)
chr3 (174-241)||(52835790-52835857)
chr3 (174-240)||(32315447-32315513)
chr3 (108-241)||(29838294-29838432)
chr3 (170-241)||(42093462-42093533)
chr3 (170-272)||(889195-889297)
chr3 (174-241)||(14545906-14545974)
chr3 (182-241)||(26582691-26582750)
chr3 (170-241)||(33162387-33162458)
chr3 (170-241)||(55092452-55092523)
chr3 (107-241)||(38807783-38807922)
chr3 (173-272)||(27285183-27285282)
chr3 (106-241)||(27934696-27934836)
chr3 (106-162)||(19590436-19590492)
chr3 (106-162)||(55092203-55092259)
chr3 (108-158)||(17109747-17109797)
chr3 (104-158)||(52835878-52835932)
chr3 (106-154)||(17109849-17109897)
chr3 (106-157)||(32315374-32315425)
chr3 (103-160)||(31480446-31480503)
chr3 (99-156)||(43441263-43441320)
chr3 (106-158)||(14545833-14545885)
chr3 (106-154)||(55092544-55092592)
[»] chr8 (47 HSPs)
chr8 (104-302)||(26479478-26479681)
chr8 (107-302)||(6891778-6891977)
chr8 (106-302)||(13154237-13154438)
chr8 (106-302)||(6943655-6943856)
chr8 (106-302)||(31403097-31403298)
chr8 (110-302)||(31685672-31685869)
chr8 (103-302)||(18764469-18764673)
chr8 (105-302)||(31186371-31186572)
chr8 (106-302)||(9180043-9180244)
chr8 (170-302)||(24332329-24332461)
chr8 (106-291)||(220511-220700)
chr8 (106-291)||(689666-689855)
chr8 (106-291)||(734134-734323)
chr8 (106-291)||(858030-858219)
chr8 (106-302)||(2835123-2835324)
chr8 (109-302)||(37586201-37586398)
chr8 (170-302)||(13405515-13405647)
chr8 (199-302)||(3272816-3272919)
chr8 (184-302)||(27993461-27993579)
chr8 (184-302)||(28050763-28050881)
chr8 (170-241)||(31685916-31685987)
chr8 (105-241)||(3272965-3273106)
chr8 (221-302)||(20112533-20112615)
chr8 (109-272)||(24332476-24332640)
chr8 (170-241)||(13405693-13405764)
chr8 (106-162)||(3272747-3272803)
chr8 (170-241)||(9180290-9180361)
chr8 (170-241)||(13154484-13154555)
chr8 (170-272)||(31186587-31186689)
chr8 (106-238)||(26479324-26479460)
chr8 (172-241)||(31402982-31403051)
chr8 (106-241)||(6943902-6944042)
chr8 (106-241)||(18764283-18764423)
chr8 (106-238)||(2835342-2835478)
chr8 (109-160)||(31186675-31186726)
chr8 (106-156)||(13405446-13405496)
chr8 (252-302)||(36449151-36449201)
chr8 (106-158)||(31402910-31402962)
chr8 (106-137)||(20112424-20112455)
chr8 (198-241)||(37586113-37586156)
chr8 (199-241)||(6892023-6892065)
chr8 (103-160)||(7185950-7186007)
chr8 (103-160)||(14489019-14489076)
chr8 (103-160)||(34963610-34963667)
chr8 (103-160)||(42133100-42133157)
chr8 (104-160)||(1778562-1778618)
chr8 (247-303)||(32399173-32399228)
[»] chr1 (45 HSPs)
chr1 (106-302)||(20061982-20062183)
chr1 (106-302)||(50624764-50624965)
chr1 (106-302)||(14602008-14602209)
chr1 (106-302)||(33619080-33619281)
chr1 (106-302)||(26244547-26244748)
chr1 (106-302)||(28031645-28031846)
chr1 (107-302)||(50096132-50096332)
chr1 (103-302)||(10913770-10913973)
chr1 (103-302)||(37172432-37172636)
chr1 (106-302)||(33555-33756)
chr1 (106-302)||(43191840-43192041)
chr1 (106-294)||(47828961-47829153)
chr1 (170-302)||(42154817-42154949)
chr1 (106-293)||(12322090-12322282)
chr1 (106-271)||(18963607-18963777)
chr1 (173-302)||(39288338-39288467)
chr1 (106-241)||(50625011-50625149)
chr1 (106-241)||(20061796-20061936)
chr1 (170-272)||(50096347-50096449)
chr1 (106-275)||(14602221-14602393)
chr1 (106-206)||(50616937-50617042)
chr1 (106-241)||(28031892-28032032)
chr1 (109-272)||(47829176-47829342)
chr1 (170-241)||(43191723-43191794)
chr1 (170-272)||(10913988-10914090)
chr1 (170-275)||(42154961-42155066)
chr1 (174-241)||(26244794-26244861)
chr1 (106-241)||(37172246-37172386)
chr1 (170-229)||(39027548-39027607)
chr1 (174-241)||(39288224-39288292)
chr1 (170-241)||(33802-33873)
chr1 (174-241)||(12322337-12322404)
chr1 (106-225)||(39027606-39027730)
chr1 (247-285)||(52490081-52490119)
chr1 (204-298)||(29584494-29584588)
chr1 (183-241)||(33618976-33619034)
chr1 (170-302)||(44561605-44561735)
chr1 (174-250)||(51999546-51999622)
chr1 (105-160)||(42154777-42154831)
chr1 (106-155)||(42155085-42155134)
chr1 (107-160)||(43191655-43191708)
chr1 (103-152)||(50096472-50096521)
chr1 (104-160)||(10631162-10631218)
chr1 (104-160)||(24977776-24977832)
chr1 (104-160)||(40718108-40718164)
[»] chr7 (35 HSPs)
chr7 (106-302)||(19157693-19157892)
chr7 (106-302)||(20757092-20757291)
chr7 (107-302)||(42516866-42517066)
chr7 (105-302)||(13426476-13426678)
chr7 (104-303)||(34595502-34595706)
chr7 (107-302)||(24540-24742)
chr7 (106-302)||(44219478-44219679)
chr7 (105-302)||(35026442-35026643)
chr7 (106-294)||(44483227-44483421)
chr7 (173-302)||(40729133-40729262)
chr7 (105-302)||(22364837-22365037)
chr7 (106-302)||(19476391-19476593)
chr7 (106-302)||(34487140-34487341)
chr7 (106-302)||(31579615-31579817)
chr7 (170-300)||(22954526-22954647)
chr7 (173-241)||(19476639-19476707)
chr7 (103-241)||(24351-24494)
chr7 (106-241)||(19157938-19158078)
chr7 (106-241)||(20757337-20757477)
chr7 (106-160)||(40729090-40729144)
chr7 (173-241)||(829926-829994)
chr7 (173-241)||(1195106-1195174)
chr7 (107-241)||(22364656-22364791)
chr7 (106-241)||(40729308-40729448)
chr7 (170-241)||(42517112-42517183)
chr7 (170-241)||(44483471-44483542)
chr7 (108-241)||(44219294-44219432)
chr7 (173-272)||(22954410-22954509)
chr7 (170-241)||(31579498-31579569)
chr7 (174-241)||(34487387-34487454)
chr7 (174-241)||(34595390-34595457)
chr7 (170-241)||(35026689-35026760)
chr7 (104-160)||(827094-827151)
chr7 (104-160)||(829105-829162)
chr7 (108-156)||(13426325-13426373)
[»] scaffold0167 (1 HSPs)
scaffold0167 (105-302)||(4571-4773)
[»] chr6 (38 HSPs)
chr6 (106-302)||(19661533-19661734)
chr6 (104-302)||(30609050-30609253)
chr6 (107-302)||(5923825-5924026)
chr6 (106-302)||(3345204-3345404)
chr6 (106-302)||(31717173-31717374)
chr6 (109-302)||(33783581-33783780)
chr6 (104-302)||(28853480-28853684)
chr6 (107-302)||(8926186-8926386)
chr6 (170-302)||(29819453-29819585)
chr6 (107-302)||(8936443-8936643)
chr6 (107-302)||(3484782-3484983)
chr6 (104-302)||(17238028-17238233)
chr6 (103-302)||(16525191-16525392)
chr6 (199-302)||(5404666-5404769)
chr6 (106-272)||(17238248-17238419)
chr6 (106-241)||(5404815-5404955)
chr6 (170-241)||(30608933-30609004)
chr6 (104-272)||(19661346-19661518)
chr6 (106-160)||(29819413-29819467)
chr6 (173-241)||(16525438-16525506)
chr6 (106-241)||(26272225-26272365)
chr6 (106-241)||(28853730-28853870)
chr6 (170-241)||(31717420-31717491)
chr6 (103-241)||(8926432-8926577)
chr6 (103-241)||(8936689-8936834)
chr6 (173-241)||(3345090-3345158)
chr6 (173-241)||(5924072-5924140)
chr6 (106-241)||(3485019-3485159)
chr6 (108-209)||(5140690-5140796)
chr6 (109-162)||(5404601-5404654)
chr6 (106-241)||(9571641-9571781)
chr6 (174-241)||(29819631-29819698)
chr6 (173-263)||(33783467-33783557)
chr6 (106-211)||(5409170-5409280)
chr6 (14-66)||(24638851-24638903)
chr6 (109-160)||(5924159-5924210)
chr6 (122-162)||(1214712-1214752)
chr6 (122-162)||(6564598-6564638)
[»] chr2 (60 HSPs)
chr2 (109-302)||(7877508-7877707)
chr2 (105-302)||(19204589-19204791)
chr2 (107-302)||(14379297-14379497)
chr2 (106-302)||(13572470-13572670)
chr2 (106-302)||(18369197-18369397)
chr2 (107-302)||(38873473-38873671)
chr2 (108-302)||(3371302-3371501)
chr2 (106-302)||(12806546-12806748)
chr2 (106-302)||(29683174-29683373)
chr2 (107-302)||(41594135-41594335)
chr2 (106-302)||(2395155-2395356)
chr2 (106-302)||(6164082-6164283)
chr2 (106-302)||(28921192-28921392)
chr2 (106-302)||(30432779-30432980)
chr2 (106-302)||(37609140-37609340)
chr2 (107-302)||(6880157-6880357)
chr2 (107-302)||(17457902-17458102)
chr2 (106-302)||(10748678-10748876)
chr2 (175-302)||(4171597-4171724)
chr2 (170-302)||(3948548-3948680)
chr2 (170-302)||(33940861-33940993)
chr2 (105-302)||(32521471-32521674)
chr2 (204-302)||(42705053-42705151)
chr2 (105-262)||(25318518-25318680)
chr2 (184-281)||(30771149-30771246)
chr2 (107-241)||(29683419-29683558)
chr2 (106-241)||(18369011-18369151)
chr2 (170-241)||(7877391-7877462)
chr2 (170-272)||(4171739-4171841)
chr2 (170-241)||(3948431-3948502)
chr2 (106-241)||(12806794-12806934)
chr2 (106-241)||(28921438-28921578)
chr2 (170-272)||(6880040-6880142)
chr2 (174-240)||(19204838-19204904)
chr2 (173-241)||(3371547-3371615)
chr2 (109-241)||(14379114-14379251)
chr2 (170-241)||(10748561-10748632)
chr2 (170-241)||(41594018-41594089)
chr2 (170-241)||(42705197-42705268)
chr2 (106-241)||(2395402-2395542)
chr2 (174-272)||(17457789-17457887)
chr2 (175-241)||(37609028-37609094)
chr2 (106-155)||(42704987-42705036)
chr2 (173-241)||(32521720-32521788)
chr2 (173-241)||(33940751-33940819)
chr2 (174-241)||(6163969-6164036)
chr2 (106-241)||(30432594-30432733)
chr2 (104-160)||(6879998-6880054)
chr2 (106-153)||(13278062-13278110)
chr2 (170-241)||(13572716-13572787)
chr2 (184-273)||(35510901-35510990)
chr2 (170-272)||(25318383-25318485)
chr2 (122-160)||(30215817-30215855)
chr2 (106-160)||(33940679-33940733)
chr2 (104-162)||(42695866-42695924)
chr2 (107-160)||(10748493-10748546)
chr2 (108-157)||(42705286-42705335)
chr2 (109-161)||(3948695-3948747)
chr2 (109-157)||(4171859-4171907)
chr2 (106-158)||(19204926-19204978)
[»] scaffold0817 (2 HSPs)
scaffold0817 (106-295)||(3981-4175)
scaffold0817 (106-241)||(4227-4367)
[»] scaffold0103 (3 HSPs)
scaffold0103 (103-302)||(43461-43666)
scaffold0103 (173-241)||(43347-43415)
scaffold0103 (106-160)||(43275-43329)
[»] scaffold0006 (3 HSPs)
scaffold0006 (106-302)||(212596-212797)
scaffold0006 (170-241)||(212479-212550)
scaffold0006 (106-160)||(212410-212464)
[»] scaffold0021 (2 HSPs)
scaffold0021 (108-303)||(118029-118228)
scaffold0021 (170-241)||(118277-118348)
[»] scaffold0126 (2 HSPs)
scaffold0126 (106-302)||(36178-36378)
scaffold0126 (170-241)||(36061-36132)
[»] scaffold0170 (3 HSPs)
scaffold0170 (106-302)||(8726-8927)
scaffold0170 (170-241)||(8609-8680)
scaffold0170 (105-160)||(8538-8594)
[»] scaffold0147 (3 HSPs)
scaffold0147 (106-279)||(25121-25299)
scaffold0147 (170-241)||(25356-25427)
scaffold0147 (106-160)||(25467-25521)
[»] scaffold0137 (3 HSPs)
scaffold0137 (199-302)||(36949-37052)
scaffold0137 (106-241)||(36765-36903)
scaffold0137 (106-162)||(37064-37120)
[»] scaffold0028 (2 HSPs)
scaffold0028 (103-302)||(73928-74114)
scaffold0028 (170-241)||(74159-74230)
[»] scaffold0045 (2 HSPs)
scaffold0045 (106-158)||(43908-43960)
scaffold0045 (108-160)||(43999-44051)
[»] scaffold0062 (1 HSPs)
scaffold0062 (224-290)||(11299-11365)


Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 302
Target Start/End: Original strand, 14868580 - 14868872
Alignment:
Q  11 cacagacaagaatcattatttataacgccacaccgaaacaagttatcctttgttgataattaggaatgactataaatgaatgactatattactttggctt 110  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14868580 cacagacaagaatcattatttataacgccacatcgaaacaagttattctttgttgataattaggaatgactataaatgaatgactatattactttggctt 14868679  T
Q  111 aaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat-nnnnnnnttggttttagtccctgcaaatatagaatatttggttttgg 209  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||||||    
T  14868680 aaatatggaaacggtccctccaaatatctggcgttttggttttagtccctataaaaaaaattggttttagtcactgcaaatatagaatatttggttttgg 14868779  T
Q  210 tccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14868780 tccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 14868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 10461730 - 10461529
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       ||     |||||||||||||||||||||||||||||    
T  10461730 ggcttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatt 10461631  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10461630 tggttttggtcattggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 10461531  T
Q  301 aa 302  Q
    ||    
T  10461530 aa 10461529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 43197286 - 43197085
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||       ||     | |||||||||||||||||||||||||||    
T  43197286 ggcttaaatatggaaatggtccctgcaaatatctggtgtttttgttttagtccctataaaaatatttttttgtttttagtccctgcaaatatagaatatt 43197187  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43197186 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatatttattttagtcctcattttgagggacta 43197087  T
Q  301 aa 302  Q
    ||    
T  43197086 aa 43197085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 109 - 302
Target Start/End: Complemental strand, 18786362 - 18786165
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttgg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||     ||||||||||| ||||||||||||||||||||    
T  18786362 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttagtcc-tgcaaatatagaatatttgg 18786264  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18786263 ttttggtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattcattttagtcctcattttgagggactaaa 18786165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 105 - 302
Target Start/End: Complemental strand, 6542644 - 6542443
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn----ttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||           || ||||||||||||||||||||||||||||    
T  6542644 tggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaaaaaaaatttgttttagtccctgcaaatatagaatatt 6542545  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  6542544 tggttttagtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttaatcctcattttgaaggacta 6542445  T
Q  301 aa 302  Q
    ||    
T  6542444 aa 6542443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 15969428 - 15969629
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||       |     ||||||||||| ||||||||||||||||||    
T  15969428 ggcttaaatatggaaatggtccttacaaatatttggcgttttggttttagtccctataaaaatatatttttggttttagtctctgcaaatatagaatatt 15969527  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| || ||||||    
T  15969528 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccttataatattcattttagtcctcatttggaaggacta 15969627  T
Q  301 aa 302  Q
    ||    
T  15969628 aa 15969629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 24491228 - 24491027
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||  ||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||||||||||    
T  24491228 ggcttaaatatggaaatggtccctgcaataatctgacattttggttttagtccctgtaaaaatatttgtttggttttagtccctgcaaatatagaatatt 24491129  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24491128 tggttttggtccttgatattttgttttagtccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 24491029  T
Q  301 aa 302  Q
    ||    
T  24491028 aa 24491027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 103 - 302
Target Start/End: Original strand, 6497187 - 6497391
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||  |||||||| |||       ||     | ||||||||||||||||||||||||    
T  6497187 tttggcttaaatatggaaatggtctctgtaaatatttggcgttttgaatttagtccttataaaaatatttttttgattttagtccctgcaaatatagaat 6497286  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6497287 atttggttttggtccttggtattttgttttaatccttataaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgaggga 6497386  T
Q  298 ctaaa 302  Q
    |||||    
T  6497387 ctaaa 6497391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 3598413 - 3598612
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||| |||||||||||||||||||||| | |||||| |||||||||| |       ||     |||||||||||||||||||||||||||||||    
T  3598413 cttaaatatgaaaatggtccctgcaaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatatttg 3598512  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  3598513 gttttggtccttggtattttgttttaattcttgtaaaatcatttcatattgaaattggtccctataatattctttttagtcctcattttgagggactaaa 3598612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 41137141 - 41137340
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| | |||||       ||     ||||||||||| ||||||||||||||||||     
T  41137141 cttaaatatggaaatgatcactgcaaatatctggcgttttggttttaatacctataaaaatatttttttggttttagtccttgcaaatatagaatattta 41137240  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  41137241 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaatcggtccctataatattcattttagtcctcattttgggggactaaa 41137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 5933510 - 5933309
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||||||||||| |||||||| ||||||||| |||||| |||||       |     | ||||||||||||||||||||||||||||    
T  5933510 ggcttaaatatgaaaatggtccctgtaaatatctagcgttttggatttagttcctataaaaatatattttttgttttagtccctgcaaatatagaatatt 5933411  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||  |||||    
T  5933410 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaatcggtccctataatattcattttagtcctcattttgaatgacta 5933311  T
Q  301 aa 302  Q
    ||    
T  5933310 aa 5933309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 103 - 302
Target Start/End: Complemental strand, 22394512 - 22394308
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||| |||| ||||| | |||||||| ||||||||| |||||| |||||       ||     ||||||||||| ||||||||||||||    
T  22394512 tttggcttaaatatgaaaatagtcccggtaaatatctagcgttttggatttagttcctataaaaatatttttttggttttagtccatgcaaatatagaat 22394413  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  22394412 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaacttgatccctataatattcattttagtcctcattttgaggga 22394313  T
Q  298 ctaaa 302  Q
    |||||    
T  22394312 ctaaa 22394308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 40589036 - 40588834
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn-----ttggttttagtccctgcaaatatagaata 198  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||            ||| |||||||||||||||||||| ||||    
T  40589036 ttggcttaaatatggaaatggtccctgcaaatatctggagttttgcttttaatccctataaaaaaaattttttgtttttagtccctgcaaatataaaata 40588937  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||| | ||||| ||||||||||||||| |||||||||||||| |||||| ||||||||| |||||||||| | ||||||||||||||||||||||    
T  40588936 tttggttt-gatccttggtattttgttttaattcttgtaaaatcatttcatattaaaattggtctctataatattcactttagtcctcattttgagggac 40588838  T
Q  299 taaa 302  Q
    ||||    
T  40588837 taaa 40588834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 109 - 302
Target Start/End: Complemental strand, 4122959 - 4122761
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttgg 203  Q
    ||||||||||||||| |||  | ||||||||||||||||| |||||||||||||       ||     |||||||||||||| |||||||||||||||||    
T  4122959 ttaaatatggaaatgttcctcgtaaatatctggcgttttgcttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatatttgg 4122860  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||    
T  4122859 ttttggtccttgatattttgttttaatcctagtaaaatcatttcatattgaaattggcccctataatattcattttagtcctcatttttagggtctaaa 4122761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 29991173 - 29991301
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatt 273  Q
    ||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29991173 ttttaatccctgcaaatataaaatatttggttttggttcttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatatt 29991272  T
Q  274 tattttagtcctcattttgagggactaaa 302  Q
     ||||||||||||||||| ||||||||||    
T  29991273 cattttagtcctcattttaagggactaaa 29991301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 7133209 - 7133324
Alignment:
Q  187 aaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctc 286  Q
    |||||||||||||||| ||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  7133209 aaatatagaatatttgattttgatccttgatattttgttttaatcattgtaaaatcatttcatattgaaattgatccctataatattcattttagtcctc 7133308  T
Q  287 attttgagggactaaa 302  Q
    ||||||||||| ||||    
T  7133309 attttgagggagtaaa 7133324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 258
Target Start/End: Complemental strand, 40589639 - 40589481
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn-----ttggttttagtccctgcaaatatagaata 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||            ||| |||||||||||||||||||| ||||    
T  40589639 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttgcttttaatccctataaaaaaaaaaatttgtttttagtccctgcaaatataaaata 40589540  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaatt 258  Q
    |||||||| | ||||| ||||||||||||||| |||||||||||||| |||||| |||||    
T  40589539 tttggttt-gatccttggtattttgttttaattcttgtaaaatcatttcatattaaaatt 40589481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 104 - 241
Target Start/End: Original strand, 18785978 - 18786119
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaata 198  Q
    |||| ||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||       ||     ||||||||||| |||||||||||||||    
T  18785978 ttggtttaaataaggaaatggttcctgcaaatat-tggcattttggttttagtccctataaaaatatttttttggttttagtccttgcaaatatagaata 18786076  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  18786077 tttggttttggtccttggtattttgttttagtccttgtaaaat 18786119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 3598799 - 3598658
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    |||||||||| || |||| |||| |||||||||||| | ||||||||||||||||| |       ||     ||||||||||||||||||||||| | ||    
T  3598799 tggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataggaaat 3598700  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  3598699 ttggttttggtccttggtattttgttttagtccttgtaaaat 3598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 240
Target Start/End: Original strand, 22394122 - 22394261
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| || |||    
T  22394122 ggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 22394221  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaa 240  Q
    |||||||||||| |  |||||||||||| |||||||||||    
T  22394222 tggttttggtccctgatattttgttttagtccttgtaaaa 22394261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 43196896 - 43197039
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||| |||| |||| | |||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| ||     
T  43196896 tttggcttaaatatgaaaatagtccttacaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 43196995  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||    
T  43196996 atttagttttggtccttagtgttttgttttagtccttgtaaaat 43197039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 104 - 241
Target Start/End: Original strand, 4122575 - 4122715
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn---ttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||| |||| |||||||||||||| || | ||||| ||||||||||| |          ||| |||||||||||||||||||| || |||    
T  4122575 ttggcttaaatatgaaaatagtccctgcaaatatttgacattttgattttagtccctgtaaaaaaaaaattgattttagtccctgcaaatataaaaaatt 4122674  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||| || |||||||||    
T  4122675 tggttttggtccttggtattttgttttagtctttgtaaaat 4122715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 24490842 - 24490981
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||| || |||| ||||||||||||||||| | ||||||||||||||||| |       ||    ||||||||||||||||||||||||| ||||    
T  24490842 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttggttttagtccctgcaaatatagaaaattt 24490941  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||| || |  ||||||||||||| ||||||||||||    
T  24490942 ggttttgatcatcggtattttgttttagtccttgtaaaat 24490981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 5933196 - 5933263
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||||||    
T  5933196 ttttagtccctgcaaatataaaatatttggttttggtctttggtattttgttttagtccttgtaaaat 5933263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 7133441 - 7133370
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  7133441 ttggttttagtccctgcaaatataaaatttttggttttggtccttggtatttttttttagtccttgtaaaat 7133370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 10461416 - 10461483
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  10461416 ttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 10461483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 272
Target Start/End: Complemental strand, 6497577 - 6497406
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||     | ||||||| |||||||||||| || |||    
T  6497577 ggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttgattttagttcctgcaaatataaaaaatt 6497478  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    |||||||| |||||  |||||||||||| |||||||||||| | | ||||||| | ||||||| | ||||||    
T  6497477 tggttttgatccttgatattttgttttagtccttgtaaaattaattcatattggatttggtccttgtaatat 6497406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 14869054 - 14868918
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttgg 203  Q
    ||||||||| |||| ||||||||||||||||| | |||||||||||||| || |       ||     |||||||||||||||||||||| || ||||||    
T  14869054 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaatatttttttggttttagtccctgcaaatataaaa-atttgg 14868956  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||| ||||| ||||||||||||| ||||||||||||    
T  14868955 ttttgatccttggtattttgttttagtccttgtaaaat 14868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 6542326 - 6542397
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || ||||| ||||| ||||| ||||||| ||||| ||||||||||||    
T  6542326 ttggttttagtccctgcaaatataaaaaatttgattttgatccttggtattttattttagtccttgtaaaat 6542397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 15969742 - 15969675
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||| | | ||||||||||    
T  15969742 ttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgtttaagttcttgtaaaat 15969675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 25329167 - 25329235
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| |||||||| || ||||| ||||||||||| ||||| ||||||| ||||||||||||    
T  25329167 gttttagtccctacaaatataaaaaatttgattttggtccttcgtattatgttttagtccttgtaaaat 25329235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 24640686 - 24640648
Alignment:
Q  247 catattgaaattggtccctataatatttattttagtcct 285  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24640686 catattgaaattggtccctataatatttattttagtcct 24640648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 29991414 - 29991325
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtcc 263  Q
    ||||||||||| |||||||| || ||||| |||||||| ||  |||||||||||| ||||||||||||   | ||||||| |||||||||    
T  29991414 ttttagtccctacaaatataaaaaatttgattttggtctttgatattttgttttagtccttgtaaaattgattcatattggaattggtcc 29991325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 5933123 - 5933177
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||| |||| |||||||||||||| || | |||||||||||||||||    
T  5933123 ggcttaaatatgaaaattgtccctgcaaatatgtgacattttggttttagtccct 5933177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 10461340 - 10461394
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 157  Q
    ||||||||||||||| |||| ||||||||||||||| | | ||||||||||||||    
T  10461340 tttggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc 10461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 16416132 - 16416054
Alignment:
Q  219 ttttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    |||||||||| |||||||||||||  | |||||| |||||| ||  ||||||||| |||||| |||| |||||| ||||    
T  16416132 ttttgttttagtccttgtaaaatctattcatatttaaattgatctatataatattcattttaatccttattttgtggga 16416054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 41137428 - 41137386
Alignment:
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||    
T  41137428 tttggttttagtccttggtattttgttttagtccttgtaaaat 41137386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 29991103 - 29991152
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    ||||||||||| ||||||||||| ||||||| ||||||||  ||||||||||    
T  29991103 gcttaaatatgaaaatggtccctccaaatatttggcgttt--gttttagtcc 29991152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 35928460 - 35928404
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  35928460 ttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 35928404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 7e-80; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 5720951 - 5721151
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    ||||||||||||||||||||||||||||||    
T  5720951 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatattttttggttttagtccctgcaaatatagaatattt 5721050  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5721051 ggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggactaa 5721150  T
Q  302 a 302  Q
    |    
T  5721151 a 5721151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 989460 - 989259
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||     |||||||||||||||| ||||||||||||    
T  989460 ggcttaaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaatatttttttggttttagtccctgcagatatagaatatt 989361  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  989360 tggttttggtctttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 989261  T
Q  301 aa 302  Q
    ||    
T  989260 aa 989259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 43749945 - 43750146
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||       ||     |||||||||||||||||||||||||||||    
T  43749945 ggcttaaatatggaaatggtccctgcaaatatctggtgttttgattttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatatt 43750044  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43750045 tggttttggtccttggtattttgctttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 43750144  T
Q  301 aa 302  Q
    ||    
T  43750145 aa 43750146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 11021670 - 11021872
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||       ||     | |||| ||||||||||||||| |||||    
T  11021670 tggcttaaatatgaaaatggtccctacaaatatctggcgttttggttttagtccctataaaaatatttttttgattttggtccctgcaaatataaaatat 11021769  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11021770 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggact 11021869  T
Q  300 aaa 302  Q
    |||    
T  11021870 aaa 11021872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 13683002 - 13683203
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||       ||     |||||||||||||| ||||||||||||||    
T  13683002 ggcttaaatatggaaatgatccctgcaaatatctgacattttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatatt 13683101  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13683102 tggttttggtccttggtattttgctttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 13683201  T
Q  301 aa 302  Q
    ||    
T  13683202 aa 13683203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 16960149 - 16959948
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||       ||     ||||||||||| |||||| ||||||||||    
T  16960149 ggcttaaatatggaaatggtccctgcaaatatcttgcattttggttttagtccctataaaaatatttttttggttttagtccttgcaaaaatagaatatt 16960050  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  16960049 tggttttgatccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggacta 16959950  T
Q  301 aa 302  Q
    ||    
T  16959949 aa 16959948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 17107430 - 17107631
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |       ||     |||||||||||||||||||||||||||||    
T  17107430 ggcttaaatatggaaatggtccctgaaaatatttggcgttttagttttagtccctgttaaaatatttttttggttttagtccctgcaaatatagaatatt 17107529  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17107530 tggttttggtccttggtattttgttttaatccttgtacaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 17107629  T
Q  301 aa 302  Q
    ||    
T  17107630 aa 17107631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 22487218 - 22487419
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||       ||     | |||||||| ||||||||||||||||||    
T  22487218 ggcttaaatatggaaatggtccccgcaaatatctggtgttttggttttagtccttataaaaatatttttttgtttttagtctctgcaaatatagaatatt 22487317  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22487318 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 22487417  T
Q  301 aa 302  Q
    ||    
T  22487418 aa 22487419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 37815339 - 37815540
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||       ||     ||||||||||| |||||||||||||||||    
T  37815339 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatttttttggttttagtccatgcaaatatagaatatt 37815438  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  37815439 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgaaggacta 37815538  T
Q  301 aa 302  Q
    ||    
T  37815539 aa 37815540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 105 - 302
Target Start/End: Complemental strand, 2184781 - 2184578
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc-cctatnnnnnnntt-----ggttttagtccctgcaaatatagaata 198  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||       ||     |||||||||||||||||||||||||||    
T  2184781 tggctttaatatggaaatggtccctgcaaatatctgacgttttggttttagtgtcctataaaaatatttttttggttttagtccctgcaaatatagaata 2184682  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||| |    
T  2184681 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccatataatattcattttagtcctcatattgagggtc 2184582  T
Q  299 taaa 302  Q
    ||||    
T  2184581 taaa 2184578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 12792958 - 12792756
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaata 198  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||       |     |  |||||||||||||||||||||||||    
T  12792958 ttggcttaaatatggaaatggtcc-tgcaaatatctagcattttggttttagtccctataattttttattttttattttagtccctgcaaatatagaata 12792860  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  12792859 tttggttttggtccttggtattttgttttaatccttgtaaaattatttcatattgaaattggtcactataatattcattttagtcctcattttgagggac 12792760  T
Q  299 taaa 302  Q
    ||||    
T  12792759 taaa 12792756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 46480984 - 46481116
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  46480984 ttggttttagtccctacaaatatagaatatttggttttggtccttggtattttgttttaatcattgtaaaatcatttcatattgaaattggtccctataa 46481083  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| ||||||||||||||||||||||||||||    
T  46481084 tattcattttagtcctcattttgagggactaaa 46481116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 46081757 - 46081558
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||| ||||||| || ||||||||||| ||||||||||||| ||| |||       |     | ||||||||  ||||||||||||||||||||    
T  46081757 cttaaatatgaaaatggttcccgcaaatatctgacgttttggttttaatccttatgagaatatattttttgttttagtttctgcaaatatagaatatttg 46081658  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46081657 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaa 46081558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 302
Target Start/End: Complemental strand, 39385550 - 39385345
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt------tggttttagtccctgcaaatatagaa 196  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||       |      | ||||||||||||||||||||| ||    
T  39385550 tttggcttaaatatggaaatggtccctacaaatatctgacgttttgcttttaatccctataaaaatatattattttgttttagtccctgcaaatataaaa 39385451  T
Q  197 tatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggg 296  Q
    ||||||||||| ||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  39385450 tatttggtttttgtctttggtatattgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgaagg 39385351  T
Q  297 actaaa 302  Q
    ||||||    
T  39385350 actaaa 39385345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 17865043 - 17865175
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  17865043 ttggttttagtccctgcaaatatagaatatttggttttggtccttgatattttgttttaatccttgtaaaatcatttcatattgaaaatggtccctataa 17865142  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| |||||||||||| |||||||||||||||    
T  17865143 tattcattttagtcctcgttttgagggactaaa 17865175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 26314858 - 26314659
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||| |||||||       ||     |||||||||||||||||||||||||||||||    
T  26314858 cttaaatatggaaatgttcctggcaaatatctggcgttttggttttaatccctataaaaatatttttttggttttagtccctgcaaatatagaatatttg 26314759  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||| | ||||| |||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  26314758 gtttagatccttggtattttgttttaatccacgtaaaatcatttcatattgaaattggtccatataatattcattttagttctcattttgagggactaaa 26314659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 106 - 295
Target Start/End: Complemental strand, 9301953 - 9301760
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||       ||     ||||||||||| |||||||||||||||||    
T  9301953 ggcttaaatatggaaatggtcca-gcaaatatctggcgttttgattttagtctctataaaaatatttttttggttttagtccatgcaaatatagaatatt 9301855  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagg 295  Q
    || ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  9301854 tgattttggtccttggtattttgttttaatccttgtaaaatcatttcatattgatattggtccgtataatattcattttagtcctcattttgagg 9301760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 4712177 - 4712377
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||       ||     ||| |||||||||||||||||||||||||    
T  4712177 ggcttaaatatgaaaatggtccctgcaaatatttggcgttttggttttagttcctataattttttttttttggtattagtccctgcaaatatagaatatt 4712276  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||| |||| || |||||    
T  4712277 tggttttggtccttggtattttgttt-aatccttataaaatcatttcatattgaaattggtccctataatattcattttaatcctcgttttaagagacta 4712375  T
Q  301 aa 302  Q
    ||    
T  4712376 aa 4712377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 13493270 - 13493068
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn------ttggttttagtccctgcaaatatagaatat 199  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||  ||              ||||||||||||||||||||||||||||||    
T  13493270 ggcttaaatatggaaatggtccctgcaaatatttagcgttttggttttagtctataaaaataaaataaaattggttttagtccctgcaaatatagaatat 13493171  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||| ||| | ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |  ||| |||||||||||||||||||||    
T  13493170 ttggttttgatccatggtattttgttttaatccttgtaaaaccatttcatattgaaattggtccctataatgtacattgtagtcctcattttgagggact 13493071  T
Q  300 aaa 302  Q
    |||    
T  13493070 aaa 13493068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 16491714 - 16491846
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |    
T  16491714 ttggttttaatccctgcaaatatagaatatttggttttggtccttggtattttattttaatccttataaaatcatttcatattgaaattggtccctatga 16491813  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| ||||||||||||||||||||||| ||||    
T  16491814 tattcattttagtcctcattttgagggattaaa 16491846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 32593123 - 32592927
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||| || ||||||||||  | ||||||||||| ||| |||       ||    ||||||||||||||||||||||||||||||     
T  32593123 gcttaaatatggaaatggttccagcaaatatcttacattttggttttaatccttataaaataattttttggttttagtccctgcaaatatagaatattta 32593024  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||    ||||||||||||||||||| |||||||||| |||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||    
T  32593023 gttttggtcg---gtattttgttttaatccttataaaatcatttcatattgatattggttcatataatattcattttagtcctcattttgagggactaaa 32592927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 4712562 - 4712423
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||||||||       ||    |||||||||||||||||||||| || ||||    
T  4712562 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaatattttttggttttagtccctgcaaatataaaaaattt 4712463  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  4712462 ggttttggtccttggtattttgttttaatccttgtaaaat 4712423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 20045874 - 20046001
Alignment:
Q  175 tttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatattt 274  Q
    |||||| |||||||||||| ||||||| ||||||||| || || ||||||||||||| || |||||| ||| |||||||||||||| | ||||||||||     
T  20045874 tttagttcctgcaaatatataatatttagttttggtctttggtgttttgttttaatctttataaaattatttcatattgaaattggcctctataatattc 20045973  T
Q  275 attttagtcctcattttgagggactaaa 302  Q
    ||||||||||||||||||| ||||||||    
T  20045974 attttagtcctcattttgaaggactaaa 20046001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 17865361 - 17865221
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| || |||    
T  17865361 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 17865262  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  17865261 tggttttggtctttggtattttgttttaatccttgtaaaat 17865221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 22487603 - 22487465
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct---atnnnnnnnttggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||||| |||| |||||||||||||| || | |||||||||||||||||   ||       ||||||||||||| |||||||||  || |||||    
T  22487603 ggcttaaatatgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaattttttttttggttttagtccttgcaaatatgaaaaatttg 22487504  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  22487503 gttttggtccttggtattttgttttagtccttgtaaaat 22487465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 37815727 - 37815586
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct------atnnnnnnnttggttttagtccctgcaaatatagaatat 199  Q
    |||||||||||| |||| ||||| ||||||||||| | |||||||||||||||||      ||       |||||||||||||||||||||||| || ||    
T  37815727 ggcttaaatatgaaaattgtcccagcaaatatctgacattttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatataaaaaat 37815628  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  37815627 ttggttttggtccttggtattttattttagtccttgtaaaat 37815586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 241
Target Start/End: Original strand, 16959759 - 16959902
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt------ggttttagtccctgcaaatatagaat 197  Q
    |||||||||||||| |||| ||||||||||||||||| | |||| ||||||||||||||       ||      ||||||||||| |||||||||| ||     
T  16959759 ttggcttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtccctataaaaatattttttttggttttagtccatgcaaatataaaaa 16959858  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||    
T  16959859 atttggttttggtcctttgtattttgatttagtccttgtaaaat 16959902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 43750259 - 43750161
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||  || ||||||| | ||||||| | ||||||    
T  43750259 ttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgtttcatattggatttggtccttgtaatat 43750161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 13492881 - 13493022
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||| | || |     
T  13492881 tggcttaaatatgaaaatagtccctgcaaatatctgactttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaataaaaaaaaa 13492980  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| || ||||||||||||| ||||||||||||    
T  13492981 ttggttttggtctttggtattttgttttattccttgtaaaat 13493022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 17864945 - 17864997
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17864945 ggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtcc 17864997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 12792643 - 12792710
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||| || ||||| |||||||||||  |||||||||||||||||||||||||    
T  12792643 ttttagtccctgcaaatataaaaaatttgattttggtccttgatattttgttttaatccttgtaaaat 12792710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 26314472 - 26314611
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaata 198  Q
    ||||||||||| || |||| ||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| || |    
T  26314472 ttggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaactatttttttggttttagtccctgcaaatataaaaaa 26314571  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaa 239  Q
    || | ||||||||||| ||||||||||||| ||||||||||    
T  26314572 tt-gtttttggtccttggtattttgttttagtccttgtaaa 26314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 32592810 - 32592881
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||  |||||||||||| ||||||||||||    
T  32592810 ttggttttagtccctgcaaatataaaaattttggttttggtccttgatattttgttttagtccttgtaaaat 32592881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 46480944 - 46480999
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcccta 161  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  46480944 ggcttaaatatgaaaatggtccttgcaaatatctggcgttttggttttagtcccta 46480999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 2184462 - 2184532
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||| |||||||||  || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  2184462 ttggttttagtcc-tgcaaatattaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 2184532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 13683301 - 13683218
Alignment:
Q  189 atatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    ||||| || ||||||||||||||||| ||||||||||||| ||||||||||||   | ||||||| | ||||||| ||||||||    
T  13683301 atataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttataatat 13683218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 17107744 - 17107681
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgta 237  Q
    |||||||||||||||||||| || | ||| ||||||||||| ||||||||||||| ||||||||    
T  17107744 ttttagtccctgcaaatataaaaaaattgattttggtccttggtattttgttttagtccttgta 17107681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 16491949 - 16491892
Alignment:
Q  184 tgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||| || | ||||||||||||||| ||||||||||||| ||||||||||||    
T  16491949 tgcaaatataaaaaaattggttttggtccttggtattttgttttagtccttgtaaaat 16491892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 46481219 - 46481162
Alignment:
Q  184 tgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||| || |||||||| |||||||| ||||||||||||| ||||||||||||    
T  46481219 tgcaaatataaaaaatttggttatggtccttggtattttgttttagtccttgtaaaat 46481162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 9301641 - 9301729
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtc 262  Q
    ||||||||||| |||| ||| || |||||||||||||||||   ||||||||||| |||||||||||| | | ||||||| | ||||||    
T  9301641 ttttagtcccttcaaacataaaaaatttggttttggtccttgaaattttgttttagtccttgtaaaattaattcatattggatttggtc 9301729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 11021989 - 11021918
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||| | |||||||| || ||||| ||||||||||  ||||||||||||| || |||||||||    
T  11021989 ttggttttagtccttacaaatataaaaaatttgattttggtcctcggtattttgttttagtctttgtaaaat 11021918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 17107816 - 17107765
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 157  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||    
T  17107816 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtc 17107765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 20046114 - 20046047
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||  |||||| || |||||||||||||||||  |||||||||||| | ||||||||||    
T  20046114 ttttagtccctgtcaatataaaaaatttggttttggtccttgctattttgttttagttcttgtaaaat 20046047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 6100619 - 6100550
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatc 242  Q
    |||||||||  ||||||||||||| ||||  ||||||||||| ||||||||||||| || || |||||||    
T  6100619 gttttagtctttgcaaatatagaaaatttcattttggtccttggtattttgttttagtctttataaaatc 6100550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 5721265 - 5721197
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggtttt-ggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||  ||||||||| || |||||||||| |||| || ||||||||||||| ||||||||||||    
T  5721265 ttttagtccaagcaaatataaaaaatttggtttttggtcattggtattttgttttagtccttgtaaaat 5721197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 989144 - 989244
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||||| || ||||||| || | ||||||||| ||||| ||||||||||| | ||||||||||||   | ||||||||| ||||||| | |||    
T  989144 ttggttttagtcc-tgtaaatataaaaaaattggttttgatcctt-gtattttgtttcagtccttgtaaaattgattcatattgaatttggtccttgtaa 989241  T
Q  270 tat 272  Q
    |||    
T  989242 tat 989244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 16492031 - 16491977
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||| |||| ||| ||||||||||||| | ||||||||||| |||||    
T  16492031 ggcttaaatatgaaaatagtcactgcaaatatctgacattttggttttaatccct 16491977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 43750329 - 43750279
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 157  Q
    ||||||||||| |||| ||||||||||||||| | | ||||||||||||||    
T  43750329 gcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc 43750279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 2184422 - 2184474
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    |||||||||||| |||| | | ||||||||||||| | |||||||||||||||    
T  2184422 ggcttaaatatgaaaatagcctctgcaaatatctgacattttggttttagtcc 2184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 13073757 - 13073813
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  13073757 ttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 13073813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 16491645 - 16491701
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||| ||||||||| || ||||||||||| ||||  ||||||| |||||    
T  16491645 ggcttaaatatgaaaatggtccttgtaaatatctggcattttaattttagttcctat 16491701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 19321861 - 19321805
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  19321861 ttggctaaaatatggttttggtccctgcaaatatgtttcgttttggttttagtccct 19321805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 29420521 - 29420481
Alignment:
Q  122 tggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||||||| |  |||||||||||||||||||||    
T  29420521 tggtccctgcaaatatgtctcgttttggttttagtccctat 29420481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 42239455 - 42239407
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 157  Q
    ||||||||| |||| ||||||||||||||||| | |||| |||||||||    
T  42239455 ttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtc 42239407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 46481302 - 46481250
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    |||||||||||| |||| ||||||||||||||||  | |||||| ||||||||    
T  46481302 ggcttaaatatgaaaatagtccctgcaaatatctaacattttggatttagtcc 46481250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 49097863 - 49097807
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttt 226  Q
    ||||||| | ||| |||||||||||||||||| |||||| |||||| | ||||||||    
T  49097863 ttggtttcactccttgcaaatatagaatattttgttttgatccttactgttttgttt 49097807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 103 - 302
Target Start/End: Original strand, 52835540 - 52835744
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       ||     ||||||||||||||||||||||||||    
T  52835540 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaat 52835639  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  52835640 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgaggga 52835739  T
Q  298 ctaaa 302  Q
    |||||    
T  52835740 ctaaa 52835744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 27934449 - 27934650
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||     ||||||||||||| |||||||||||||||    
T  27934449 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtcccttcaaatatagaatatt 27934548  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27934549 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 27934648  T
Q  301 aa 302  Q
    ||    
T  27934649 aa 27934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 46962967 - 46962766
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||     ||||||| |||||||||||||||||||||    
T  46962967 ggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccctataaaaatatttttttggttttaatccctgcaaatatagaatatt 46962868  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  46962867 tggttttggttcttggtattttgttttaatccttgtaaaatcatttcatattgaaattgatccctataatattcattttagtcctcattttgagggacta 46962768  T
Q  301 aa 302  Q
    ||    
T  46962767 aa 46962766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 49499841 - 49500042
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||       ||     |||||||||||||||||||||| ||||||    
T  49499841 ggcttaaatatggaaatggtccttgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatatataatatt 49499940  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  49499941 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggacta 49500040  T
Q  301 aa 302  Q
    ||    
T  49500041 aa 49500042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 109 - 302
Target Start/End: Original strand, 16056350 - 16056547
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatatttggt 204  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||    |||||||||||||||||||||||||||||||||    
T  16056350 ttaaatatggaattggtccctgcaaatatctggcgttttggttttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggt 16056449  T
Q  205 tttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  16056450 tttggtcattgatattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtccttattttgagggactaaa 16056547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 50645469 - 50645671
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||       ||     ||||||||||| |||||| |||||||||    
T  50645469 tggcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagttcctataaaaatatttttttggttttagtccttgcaaaaatagaatat 50645568  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  50645569 ttggttttgatccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggact 50645668  T
Q  300 aaa 302  Q
    |||    
T  50645669 aaa 50645671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 42093777 - 42093579
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatatttgg 203  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||       ||    | ||||| |||||||||||||||||||||||     
T  42093777 cttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaatatttttttgtttttaatccctgcaaatatagaatatttga 42093678  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  42093677 ttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtcccaataatattcattttagtcctcattttgagggactaaa 42093579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 29838679 - 29838478
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||       ||     ||||||||||| |||||| ||||||||||    
T  29838679 ggcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccatataaaaatatttttttggttttagtccttgcaaaaatagaatatt 29838580  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  29838579 tagttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggacta 29838480  T
Q  301 aa 302  Q
    ||    
T  29838479 aa 29838478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 27284966 - 27285168
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaata 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||       ||     |||||||||||||||||||||||||||    
T  27284966 ttggcttaaatatggaaatggtccctgcaaatatctggcattttgattttagttcctataaaaatatttttttggttttagtccctgcaaatatagaata 27285065  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||||||||| ||    
T  27285066 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtctctat-atattcattttagtcctcattttgaggtac 27285164  T
Q  299 taaa 302  Q
    ||||    
T  27285165 taaa 27285168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 109 - 298
Target Start/End: Original strand, 38807539 - 38807733
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttgg 203  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||| || |||       ||     ||||||||||||||||||||||||||||||||    
T  38807539 ttaaatatgaaaatggtccctgtaaatatctggcgttttggttttagcccttataaaaatatttttttggttttagtccctgcaaatatagaatatttgg 38807638  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38807639 ttttggtccttggtattttgtttcaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggac 38807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 14546219 - 14546020
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-----gttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| |||| || |       ||      ||||||||||||||||||||||||||||||    
T  14546219 cttaaatatggaaatggtccctgcaaatatctgacattttggtttcagtcactgtaaaaatattttttgagttttagtccctgcaaatatagaatatttg 14546120  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  14546119 gttttggtcctttgtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagttctcattttgagggactaaa 14546020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 26582995 - 26582796
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |       ||     | |||||||||||||||||||||||||||||    
T  26582995 cttaaatatggaaatggtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttgattttagtccctgcaaatatagaatatttg 26582896  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
     ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  26582895 attttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggattaaa 26582796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 32315759 - 32315560
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||| |       ||    |||||||| || | |||||||||||||||||    
T  32315759 gcttaaatatggaaatggtccctgcaaatatctgatattttggttttagtccctgtaaaaatattttttggttttaggccatacaaatatagaatatttg 32315660  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32315659 gttttggtccttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaa 32315560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 103 - 294
Target Start/End: Original strand, 7029380 - 7029576
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||       ||     ||||||||||||||||||||||||||    
T  7029380 tttggcttaaatatggaaatggttcctgcaaatatctggcgtttttgttctagtccctataaaaatatttttttggttttagtccctgcaaatatagaat 7029479  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgag 294  Q
    |||||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  7029480 atttggttttggtcttcggtattttgttttaatccttgtaaaatcatttcatattgaaattgatccctataatattcaatttagtcctcattttgag 7029576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 33162705 - 33162504
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||| | ||||||||| |||||| ||||||||||||||       ||     ||||||||||| |||||||||||||||||    
T  33162705 ggcttaaatatggaaatggtccccgtaaatatctgacgttttagttttagtccctataaaaatatttttttggttttagtccttgcaaatatagaatatt 33162606  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  33162605 tggttttggtccttgatattttgtgttaatccttgtaaaatcatttcatattgaaattggtccgtataatattcattttagtcctcattttgagggatta 33162506  T
Q  301 aa 302  Q
    ||    
T  33162505 aa 33162504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 49121714 - 49121915
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn------ttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||             ||||||||||||| |||||||||| ||||||    
T  49121714 gcttaaatatggaaatggtccctgcaaatatctggcattttgattttagcccctataaaaatactttttttggttttagtccatgcaaatataaaatatt 49121813  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    | ||||||||||||  ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  49121814 tagttttggtccttgatattttgttttaatcattgtaaaattatttcatattgaaattggtccctataatattcactttagtcctcattttgagggacta 49121913  T
Q  301 aa 302  Q
    ||    
T  49121914 aa 49121915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 55092278 - 55092406
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatt 273  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  55092278 ttttagtccgtgcaaatatagaatatttggttttggtccttgatattttgttttaatccttgtaaaatcatttcatattgaaattggtctctataatatt 55092377  T
Q  274 tattttagtcctcattttgagggactaaa 302  Q
     ||||||||||||||||||||||||||||    
T  55092378 cattttagtcctcattttgagggactaaa 55092406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 104 - 272
Target Start/End: Complemental strand, 21323275 - 21323101
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaata 198  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||       ||     |||||||||||||||||||||||||||    
T  21323275 ttggtttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaatttttttttttggttttagtccctgcaaatatagaata 21323176  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattgg-tccctataatat 272  Q
    |||||||||  ||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  21323175 tttggttttaatccttggtattttgttttaatccttataaaatcatttcatattgaaattggatccctataatat 21323101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 188 - 291
Target Start/End: Complemental strand, 17110149 - 17110046
Alignment:
Q  188 aatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctca 287  Q
    ||||||||||||||||| ||  || || ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  17110149 aatatagaatatttggtcttaatctttggtattttgttttaattcttgtaaaatcatttcatattgaaattggtctctataatattcattttagtcctca 17110050  T
Q  288 tttt 291  Q
    ||||    
T  17110049 tttt 17110046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 49500228 - 49500088
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| |||||||||||||| ||   |||||||||||||||||     |        ||||||||||||| |||||||||| || |||    
T  49500228 ggcttaaatatgaaaatagtccctgcaaatatttgatattttggttttagtccctgtaaaaatatttttttggttttagtccttgcaaatataaaaaatt 49500129  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  49500128 tggttttggtccttggtattttgttttaatccttgtaaaat 49500088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 50645857 - 50645717
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||| ||||||||| | |||| ||||||||||||||       ||     |||||||||||||||||||||| || |||    
T  50645857 ggcttaaatatgaaaatagtccctgtaaatatctgacattttagttttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatt 50645758  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| |||||||| |||| ||||||||||||    
T  50645757 tggttttggtcctttgtattttgatttagtccttgtaaaat 50645717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 17109918 - 17109989
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| |||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  17109918 ttggttttagtgcctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 17109989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 46962580 - 46962720
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn-----ttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| |||||||||||||||||   ||||||||||||||||| |            |||||||||||||||||||||||| || |||    
T  46962580 ggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgtaaaaaaaattttttggttttagtccctgcaaatataaaaaatt 46962679  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||  |||||||||||| ||| ||||||||    
T  46962680 tggttttggtccttgatattttgttttagtccctgtaaaat 46962720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 52835857 - 52835790
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  52835857 ttttagtccctgcaaatataaaaaatttggttttggtccttcgtattttgttttagtccttgtaaaat 52835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 32315447 - 32315513
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaa 240  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  32315447 ttttagtccttgcaaatatagaaaatttggttttggtccttggtattttgttttagtccttgtaaaa 32315513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 29838294 - 29838432
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||| |||| |||||||||||||||||   |||||||||||||||||     |        || ||||||||| ||||||||||| || |||||    
T  29838294 cttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgcaaaaatatttttttcgttttagtctctgcaaatataaaaaatttg 29838393  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  29838394 gttttggtcctttgtattttgttttagtccttgtaaaat 29838432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 42093462 - 42093533
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||| ||||||||||||    
T  42093462 ttggttttagtctctgcaaatataaaaaatttggttttgatccttggtattttgttttagtccttgtaaaat 42093533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 889195 - 889297
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||| || | ||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||   | ||||||| | ||||||| |||||    
T  889195 ttggttttagttcccgtaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttataa 889294  T
Q  270 tat 272  Q
    |||    
T  889295 tat 889297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 14545906 - 14545974
Alignment:
Q  174 ttttagtccctgcaaatatagaata-tttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||| || | |||||||||||||||| ||||||||||||| ||||||||||||    
T  14545906 ttttagtccctgcaaatataaaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 14545974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 26582691 - 26582750
Alignment:
Q  182 cctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||    
T  26582691 cctgcaaatatagaaaatttggttttggtccttgatattttgttttagtccttgtaaaat 26582750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 33162387 - 33162458
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||  | || ||||||||||| ||||| ||||||||||||| ||||||||||||    
T  33162387 ttggttttagtccctgcaaattaaaaaaatttggttttgatccttggtattttgttttagtccttgtaaaat 33162458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 55092523 - 55092452
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||| || ||||| ||||||||||| |||| ||||||||||| |||||||||    
T  55092523 ttggttttagtctctgcaaatataaaaaatttgattttggtccttggtatattgttttaatcattgtaaaat 55092452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 38807922 - 38807783
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||| ||||||| ||||||||| | ||||| ||||||||||| |       |     ||||||||||||||||||||||| || ||||    
T  38807922 gcttaaatatggaaatagtccctgtaaatatctgacattttgattttagtccctgtaaaaatatatgtttggttttagtccctgcaaatataaaaaattt 38807823  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||  ||||||| ||||| || ||| |||||    
T  38807822 ggttttggtcctctgtattttattttagtctttgaaaaat 38807783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 27285282 - 27285183
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    ||||||||||||||||||||| ||  ||||||||||||| ||  |||||||||||| || |||||||||   | ||||||| | ||||||| ||||||||    
T  27285282 gttttagtccctgcaaatataaaaagtttggttttggtcattgatattttgttttagtctttgtaaaattgattcatattggatttggtccttataatat 27285183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 27934836 - 27934696
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccc-----tatnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | || |||||||||||||      |        ||| |||||||||||| ||||||| | | ||    
T  27934836 ggcttaaatatgaaaatagtccctgcaaatatctgacattctggttttagtcccagtaaaaatatttttttgattttagtccctgtaaatataaattttt 27934737  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  27934736 tggttttggtccttgttattttgttttagtccttgtaaaat 27934696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 19590436 - 19590492
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||||||| |||| ||||||||||||| ||||||| |||||||| ||||    
T  19590436 ggcttaaatatggaaacggtctctgcaaatatctgacgttttgattttagtcgctat 19590492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 55092203 - 55092259
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||| ||||| |||||| ||||||||| |||||||||||||||| ||||    
T  55092203 ggcttaaatatgaaaatgatccctgtaaatatctgacgttttggttttagtctctat 55092259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 17109747 - 17109797
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    |||||||||| |||| |||||||||||||||| || |||||||||||||||    
T  17109747 cttaaatatgaaaatagtccctgcaaatatctagcattttggttttagtcc 17109797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 52835932 - 52835878
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    |||||||||||||| |||| ||||||||||||||| | | |||||||||||||||    
T  52835932 ttggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtcc 52835878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 17109849 - 17109897
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggtttta 154  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||    
T  17109849 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggtttta 17109897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 32315374 - 32315425
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 157  Q
    ||||||||| || |||| ||||||||||||||||| | ||||||||||||||    
T  32315374 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtc 32315425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 31480503 - 31480446
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||| |||||||||  ||||||||||||||||    |||||||||||||||||||    
T  31480503 tttggctaaaatatggatttggtccctgcaaatatgcctcgttttggttttagtccct 31480446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 43441263 - 43441320
Alignment:
Q  99 ttactttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagt 156  Q
    ||||||||||| ||||||||   |||||||||||||||| |  |||||||||||||||    
T  43441263 ttactttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagt 43441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 14545833 - 14545885
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    ||||||||| || |||| |||| |||||||||||| | |||||||||||||||    
T  14545833 ggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtcc 14545885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 55092592 - 55092544
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggtttta 154  Q
    |||||||||||| |||| |||||| |||||||||| | |||||||||||    
T  55092592 ggcttaaatatgaaaatagtccctccaaatatctgacattttggtttta 55092544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 26479681 - 26479478
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn-----ttggttttagtccctgcaaatatagaata 198  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||    
T  26479681 ttggctttaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaaaaaaaatttggttttagtccctgcaaatatagaata 26479582  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  26479581 tttggttttggtccttagtattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattcattttagtcctcattttgagggac 26479482  T
Q  299 taaa 302  Q
    ||||    
T  26479481 taaa 26479478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 6891778 - 6891977
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcccta----tnnnnnnnttggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    |       ||| |||||||||||||||||||||||||||||    
T  6891778 gcttaaatatggaaatggtccctgcaaatatctggcgtttttgttttagtctctaaaaatattttttttgtttttagtccctgcaaatatagaatatttg 6891877  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6891878 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatatttattttagtcctcattttgagggactaaa 6891977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 13154237 - 13154438
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |       ||     |||||||||||||||||||||||||||||    
T  13154237 ggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatatt 13154336  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    || ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13154337 tgattttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 13154436  T
Q  301 aa 302  Q
    ||    
T  13154437 aa 13154438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 6943655 - 6943856
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||       ||     | |||||||||||||||||||||||||||    
T  6943655 ggcttaaatatggaaatggtccccgcaaatatttggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaatatt 6943754  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  6943755 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattcattttagtcctcattttgaaggacta 6943854  T
Q  301 aa 302  Q
    ||    
T  6943855 aa 6943856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 31403298 - 31403097
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||       ||     ||||||||||||| |||||||||||||||    
T  31403298 ggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcttataaaaatatttttttggttttagtcccttcaaatatagaatatt 31403199  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  31403198 tggttttggtcctttgtattttgttttaatccttgtaaaatcatttcttattgagattggtccctataatattcattttagtcctcattttgagggacta 31403099  T
Q  301 aa 302  Q
    ||    
T  31403098 aa 31403097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 31685672 - 31685869
Alignment:
Q  110 taaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttggt 204  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||||       ||     ||||||||||| |||||||||||||||||||||    
T  31685672 taaatatggaaaaggtccctgcaaatatctagcgttttggttttaatccctataaaaatatttttttggttttagtccatgcaaatatagaatatttggt 31685771  T
Q  205 tttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  31685772 tttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaa 31685869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 103 - 302
Target Start/End: Complemental strand, 18764673 - 18764469
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn-----ttggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||            || |||||||||||||||||||||||||    
T  18764673 tttggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttatagtccctataaattttgtttatttgttttagtccctgcaaatatagaat 18764574  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| ||||| ||||||||| |||    
T  18764573 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataaaattcattatagtcgtcattttgaagga 18764474  T
Q  298 ctaaa 302  Q
    |||||    
T  18764473 ctaaa 18764469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 31186371 - 31186572
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||     | ||||||||||||||||||||||||||    
T  31186371 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaatat 31186470  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    |||||||||||| || |||||||||||||||| ||||||||||||| |||||| |||| ||||| ||||||||| |||||||||||||||||||||||||    
T  31186471 ttggttttggtcattggtattttgttttaatc-ttgtaaaatcatttcatattaaaatcggtccttataatattcattttagtcctcattttgagggact 31186569  T
Q  300 aaa 302  Q
    |||    
T  31186570 aaa 31186572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 9180043 - 9180244
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||| | |||||       ||     ||||||||||| |||||||||||||||||    
T  9180043 ggcttaaatatgaaaatggtccctgcaaatatctggcgttttgattttaattcctataaaaatatttttttggttttagtccatgcaaatatagaatatt 9180142  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  9180143 tggttgtggtccttggttttttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggacta 9180242  T
Q  301 aa 302  Q
    ||    
T  9180243 aa 9180244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 24332329 - 24332461
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24332329 ttggttttagtccctgcaaatatagaatatttggtttgggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataa 24332428  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| ||||||||||||||||||||||||||||    
T  24332429 tattcattttagtcctcattttgagggactaaa 24332461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 220511 - 220700
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||       ||    ||||||||||||||||||||||||||||||    
T  220511 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatattttttggttttagtccctgcaaatatagaatattt 220610  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcatttt 291  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||| |||||| ||||||||||    
T  220611 ggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattcattttaatcctcatttt 220700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 689666 - 689855
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||       ||    ||||||||||||||||||||||||||||||    
T  689666 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatattttttggttttagtccctgcaaatatagaatattt 689765  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcatttt 291  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||| |||||| ||||||||||    
T  689766 ggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattcattttaatcctcatttt 689855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 734134 - 734323
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||       ||    ||||||||||||||||||||||||||||||    
T  734134 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatattttttggttttagtccctgcaaatatagaatattt 734233  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcatttt 291  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||| |||||| ||||||||||    
T  734234 ggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattcattttaatcctcatttt 734323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 858030 - 858219
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||       ||    ||||||||||||||||||||||||||||||    
T  858030 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatattttttggttttagtccctgcaaatatagaatattt 858129  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcatttt 291  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||| |||||| ||||||||||    
T  858130 ggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattcattttaatcctcatttt 858219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 2835123 - 2835324
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||  ||||       ||     |||||||||| ||| ||||||| ||||||    
T  2835123 ggcttaaatatggaaatggtctctgcaaatatctgatgttttggttttagtttctataaaaatatttttttggttttagtctctgtaaatataaaatatt 2835222  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||  |||||||||||||||| ||||||||||||| | || |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  2835223 tggttttggtcctcggtattttgttttaatcattgtaaaatcatttcgtactgaaattggtccctataatattcattttaatcctcattttgagggacta 2835322  T
Q  301 aa 302  Q
    ||    
T  2835323 aa 2835324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 302
Target Start/End: Complemental strand, 37586398 - 37586201
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaatatttgg 203  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||  |||       |     |||||||||||  || |||||| | ||||||||    
T  37586398 ttaaatatggaaatggtccttacaaatatctggcgttttggttttattctttataaaaatatatttttggttttagtct-tgtaaatattggatatttgg 37586300  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  37586299 ttttggtccttggtattttgttttaatcctggtaaaatcatttcatattgaaattggtccatataatattcattttagtcttcattttgagggactaaa 37586201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 13405515 - 13405647
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||| ||||| ||||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  13405515 ttggttttagaccctgtaaatatagaatattttgttttggtctttggtattttgttttaatcattgtaaaatcatttcatattgaaattggtccttataa 13405614  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| ||||||||||||||||  ||||||||||    
T  13405615 tattcattttagtcctcatttcaagggactaaa 13405647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 3272816 - 3272919
Alignment:
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  3272816 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggat 3272915  T
Q  299 taaa 302  Q
    ||||    
T  3272916 taaa 3272919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 27993579 - 27993461
Alignment:
Q  184 tgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtc 283  Q
    |||||||||  |||| || |||||||||||| || |||||||||| ||| |||||||||  | |||| |||||||||||||||||||||||||||||||     
T  27993579 tgcaaatatgaaataatttgttttggtccttggtgttttgttttagtccctgtaaaatccattcataatgaaattggtccctataatatttattttagtt 27993480  T
Q  284 ctcattttgagggactaaa 302  Q
    || ||||||||||||||||    
T  27993479 cttattttgagggactaaa 27993461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 28050881 - 28050763
Alignment:
Q  184 tgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtc 283  Q
    |||||||||  |||| || |||||||||||| || |||||||||| ||| |||||||||  | |||| |||||||||||||||||||||||||||||||     
T  28050881 tgcaaatatgaaataatttgttttggtccttggtgttttgttttagtccctgtaaaatccattcataatgaaattggtccctataatatttattttagtt 28050782  T
Q  284 ctcattttgagggactaaa 302  Q
    || ||||||||||||||||    
T  28050781 cttattttgagggactaaa 28050763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 31685987 - 31685916
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  31685987 ttggttttagtccctgcaaatataaaaaatttggttttggtccttagtattttgttttagtccttgtaaaat 31685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 3273106 - 3272965
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    |||||||||| || |||| ||||||||||||||||| | |||||||||||||||||||       ||     | |||||||||||||||||||| || |     
T  3273106 tggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaatatttttttgattttagtccctgcaaatataaaaaac 3273007  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  3273006 ttggttttggtccttggtattttgttttagtccttgtaaaat 3272965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 302
Target Start/End: Original strand, 20112533 - 20112615
Alignment:
Q  221 ttgttttaatccttgtaaaatcattccatattgaaattggtccctat-aatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||| |||||| ||||||||||||||||||| ||||||||    
T  20112533 ttgttttaatccttgtaaaatcatttcatattgaaattggttactataaatattcattttagtcctcattttgaaggactaaa 20112615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 109 - 272
Target Start/End: Complemental strand, 24332640 - 24332476
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg--gttttagtccctgcaaatatagaatatttggttt 206  Q
    ||||||||| |||| ||||||||||||||||| | |||| |||||||||||| |       ||   |||||||||||||||| |||| || |||||||||    
T  24332640 ttaaatatgaaaattgtccctgcaaatatctgacattttagttttagtccctgtaattttttttttgttttagtccctgcaa-tataaaaaatttggttt 24332542  T
Q  207 tggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    |||||||| ||||||||||||| ||||||||||||   | ||||||||| ||||||| | ||||||    
T  24332541 tggtccttggtattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaatat 24332476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 13405764 - 13405693
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  13405764 ttggttttagtcccttcaaatataaaaaatttggttttggtccttggtattttgttttattccttgtaaaat 13405693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 3272747 - 3272803
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  3272747 ggcttaaatatgtaaatgatccctgcaaatatctggcgttttggttttagtccctat 3272803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 9180361 - 9180290
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||| |||||||||| || |||||||||||||||||  |||||||||||| ||||||||||||    
T  9180361 ttggttttagtccttgcaaatataaaaaatttggttttggtccttgatattttgttttagtccttgtaaaat 9180290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 13154555 - 13154484
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || | ||||||||||||||| ||||||||||||  ||||||||||||    
T  13154555 ttggttttagtccctgcaaatataaaaaaattggttttggtccttggtattttgtttttgtccttgtaaaat 13154484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 31186689 - 31186587
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||||| |||| || || ||||||||||||||||| |||||||||| || ||||||||||||   | ||||||| | ||||||| |||||    
T  31186689 ttggttttagtccctgtaaatctaaaaaatttggttttggtccttggtattttgttgtagtccttgtaaaattgattcatattggatttggtccttataa 31186590  T
Q  270 tat 272  Q
    |||    
T  31186589 tat 31186587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 26479324 - 26479460
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn----ttggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||| || |||| |||||||||||||| || | ||||||||||||||||| |           |||||||||||| ||||||||||| ||  |||    
T  26479324 ggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaaaaaaaattggttttagtcactgcaaatataaaaatttt 26479423  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaa 238  Q
    |||||||||| || ||||||||||||| |||||||||    
T  26479424 ggttttggtcattggtattttgttttagtccttgtaa 26479460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 31402982 - 31403051
Alignment:
Q  172 ggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||  || |||||||||    
T  31402982 ggttttagtccctgcaaatataaaatatttggttttggtcgttggtaatttgttttcgtctttgtaaaat 31403051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 6944042 - 6943902
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||| ||| |       ||     |||||||||||||||||||||  || |||    
T  6944042 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaatatttttttggttttagtccctgcaaatatgaaaaatt 6943943  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    || ||||||| |||  |||||| ||||| ||||||||||||    
T  6943942 tgattttggttcttgatattttattttagtccttgtaaaat 6943902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 18764283 - 18764423
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||| |     |        ||||||| ||||||| |||||||| ||  ||    
T  18764283 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccttgtaaaaatatttttttggtttgagtcccttcaaatataaaaactt 18764382  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| || ||||||||||||  ||||||||||||    
T  18764383 tggttttggtctttggtattttgtttttgtccttgtaaaat 18764423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 2835478 - 2835342
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||| ||||||||||| | |||||||||||||| ||     |        ||| |||||||||||||||||||| || | |    
T  2835478 ggcttaaatatgaaaatagtccccgcaaatatctgacattttggttttagtcgctgtaaaaatatttttttgattttagtccctgcaaatata-aaaaat 2835380  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaa 238  Q
    |||||||||| ||| ||||||||||||| |||||||||    
T  2835379 tggttttggttcttggtattttgttttagtccttgtaa 2835342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 31186726 - 31186675
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||||| |||| ||||||||||||||||| | |||||||||||||||||    
T  31186726 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccct 31186675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 13405446 - 13405496
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagt 156  Q
    |||||||||||| |||||||||||||||||||||||  ||||| |||||||    
T  13405446 ggcttaaatatgcaaatggtccctgcaaatatctggtattttgattttagt 13405496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 36449201 - 36449151
Alignment:
Q  252 tgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||||||||||| |||||| ||||||||||| |||||| |||||||||    
T  36449201 tgaaattggtccctacaatattcattttagtccttattttgtgggactaaa 36449151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 31402910 - 31402962
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    |||||||||||| |||| |||||||||||||||||   |||||||||||||||    
T  31402910 ggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtcc 31402962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 137
Target Start/End: Original strand, 20112424 - 20112455
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatat 137  Q
    ||||||||||||||||||||||||||||||||    
T  20112424 ggcttaaatatggaaatggtccctgcaaatat 20112455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 37586113 - 37586156
Alignment:
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||    
T  37586113 atttagttttggtccttggtattttgttttagtccttgtaaaat 37586156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 6892065 - 6892023
Alignment:
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||| || |||||||||| ||||||||||||    
T  6892065 tttggttttggtccttggtgttttgttttagtccttgtaaaat 6892023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 7186007 - 7185950
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  7186007 tttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 7185950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 14489076 - 14489019
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  14489076 tttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 14489019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 34963667 - 34963610
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  34963667 tttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 34963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 42133157 - 42133100
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  42133157 tttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 42133100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 1778562 - 1778618
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  1778562 ttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 1778618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 32399228 - 32399173
Alignment:
Q  247 catattgaaattggtccctataatatttattttagtcctcattttgagggactaaat 303  Q
    ||||||||||||||| | ||||||||| ||||||||  | |||||||||||||||||    
T  32399228 catattgaaattggtacttataatattcattttagt-tttattttgagggactaaat 32399173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 20062183 - 20061982
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||     |||||||||||||||||||||||||||||    
T  20062183 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatatagaatatt 20062084  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  20062083 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcatcattttgagggacta 20061984  T
Q  301 aa 302  Q
    ||    
T  20061983 aa 20061982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 50624764 - 50624965
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||       ||     |||||||||||||||||||||||||||||    
T  50624764 ggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttatatatatatttttttggttttagtccctgcaaatatagaatatt 50624863  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  50624864 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattcattttagtcctcattttgagggacta 50624963  T
Q  301 aa 302  Q
    ||    
T  50624964 aa 50624965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 14602008 - 14602209
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-----gttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||| |||       ||      ||||||||||||||||||||||||||||    
T  14602008 ggcttaaatatggaaatggtccctgcaaatatctggcactttggttttagtccatataaaaatatttttttagttttagtccctgcaaatatagaatatt 14602107  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14602108 tggttttgatccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 14602207  T
Q  301 aa 302  Q
    ||    
T  14602208 aa 14602209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 33619281 - 33619080
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||       ||     ||||||||||||| |||||||||||||||    
T  33619281 ggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcctataaaaatatttttttggttttagtccctacaaatatagaatatt 33619182  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  33619181 tggttttggtcctttgtattttgttttaatccttgtaaaatcatttcttattgagattggtccctataatattcattttagtcctcattttgagggacta 33619082  T
Q  301 aa 302  Q
    ||    
T  33619081 aa 33619080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 26244547 - 26244748
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |       ||     || ||||||||||||||||||||||||||    
T  26244547 ggcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggatttagtccctgcaaatatagaatatt 26244646  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    || ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26244647 tgattttggtccttggtatttagttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 26244746  T
Q  301 aa 302  Q
    ||    
T  26244747 aa 26244748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 28031645 - 28031846
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||       ||     |||||||||||||||||||||| ||||||    
T  28031645 ggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccttataaaattatttttttggttttagtccctgcaaatatataatatt 28031744  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  28031745 tggttttggtccttgatattttgttttaatccttgtaaaatcatttcatattgaaattggtccttataatattcattttagtcctcattttgaaggacta 28031844  T
Q  301 aa 302  Q
    ||    
T  28031845 aa 28031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 50096132 - 50096332
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |       ||     ||||||||||||||||||||||||||||||    
T  50096132 gcttaaatatggaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatattt 50096231  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  50096232 ggttttgatccttggtattttgttttaatccttgtaaaatcattttatattgaaattggtccctataatattcattttagtcctcattttgagggactaa 50096331  T
Q  302 a 302  Q
    |    
T  50096332 a 50096332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 103 - 302
Target Start/End: Original strand, 10913770 - 10913973
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||       ||     ||||||||||||||||||||||||||    
T  10913770 tttggcttaaatatggaaatggtccatgcaaatatttgg-gttttggttttaatccctataaagatatttttttggttttagtccctgcaaatatagaat 10913868  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10913869 atttggttttggtcattgatattttgttttaatccttgtaaaatcatttcatattgagattggtccctataatattcattttagtcctcattttgaggga 10913968  T
Q  298 ctaaa 302  Q
    |||||    
T  10913969 ctaaa 10913973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 103 - 302
Target Start/End: Complemental strand, 37172636 - 37172432
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||       ||     ||||||||||||||| ||||||||||    
T  37172636 tttggcttaaatatggacatggtcccggtaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcgaatatagaat 37172537  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  37172536 atttggttttggtctttggtattttgttttaatcattgtaaaatcatttcatattaatattggtccctataatattcattttagtcctcattttgaggga 37172437  T
Q  298 ctaaa 302  Q
    |||||    
T  37172436 ctaaa 37172432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 33555 - 33756
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-----gttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||       ||      ||||||||| ||||||||||| ||||||    
T  33555 ggcttaaatatgaacatgatccctgcaaatatctgacgttttggttttagtccctataaaaatatttttctagttttagtctctgcaaatataaaatatt 33654  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  33655 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaaatggtccctataatattcattttagtcctcgttttgagggacta 33754  T
Q  301 aa 302  Q
    ||    
T  33755 aa 33756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 43192041 - 43191840
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat-----nnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| | ||||||| || ||||||||||| |||||| |||||| |||||            ||||||||||| |||||||||||||||||||    
T  43192041 ggcttaaatatgaatatggtccatgtaaatatctggcattttggatttagttcctataaaaatatttttttggttttagttcctgcaaatatagaatatt 43191942  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43191941 tggttttggtccttggtattttgttttgatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 43191842  T
Q  301 aa 302  Q
    ||    
T  43191841 aa 43191840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 106 - 294
Target Start/End: Original strand, 47828961 - 47829153
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg----gttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||| |||||| ||||||  ||| |||||| ||||||||||||       ||     |||||||||||||||||||||||||||||    
T  47828961 ggcttaaatatggaaatgatccctgtaaatatacggcattttggatttagtccctataaaaatatttttttgttttagtccctgcaaatatagaatattt 47829060  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgag 294  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47829061 ggttttggtccttggtattttcttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgag 47829153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 42154817 - 42154949
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  42154817 ttggttttagtccctgcaaatatagaatatttagttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaactggtccctataa 42154916  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| |||||||||||| |||||||||| ||||    
T  42154917 tattcattttagtcctcgttttgagggattaaa 42154949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 106 - 293
Target Start/End: Original strand, 12322090 - 12322282
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||       ||     ||| ||||||||| |||||||||||||||    
T  12322090 ggcttaaatatgaaaatggtctctgtaaatatctgacgttttggttttagtccctataaaaatatttttttggtattagtccctacaaatatagaatatt 12322189  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttga 293  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  12322190 tggttttggtcctaggtatattgttttaatccttgtaaaatcatttcatattgaaattggtctctataatattcattttagtcctcattttga 12322282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 18963607 - 18963777
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||       ||     ||||||||||| |||||||||||||||||    
T  18963607 ggcttaaatgtggaaatggtccctgcaaatatccggcgttttggttttagtccctataaaaatatttttttggttttagtccttgcaaatatagaatatt 18963706  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataata 271  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18963707 tggttttggtcattgttattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataata 18963777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 39288467 - 39288338
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    |||||||||| | |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  39288467 gttttagtccattcaaataaagaatatttggttttggtccttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccctataatat 39288368  T
Q  273 ttattttagtcctcattttgagggactaaa 302  Q
    | |||||||||||| |||||||||||||||    
T  39288367 tcattttagtcctcgttttgagggactaaa 39288338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 50625149 - 50625011
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn---ttggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |          |||||||||||||||||||||||| || |||||    
T  50625149 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaaaaaatttggttttagtccctgcaaatataaaaaatttg 50625050  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||||| ||| ||||||||    
T  50625049 gttttggtccttggtattttgttttagtccctgtaaaat 50625011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 20061796 - 20061936
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| || |||    
T  20061796 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 20061895  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    || ||||||||||| ||||||||||||| ||||||||||||    
T  20061896 tgattttggtccttggtattttgttttactccttgtaaaat 20061936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 50096449 - 50096347
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||   | ||||||||| ||||||| | |||    
T  50096449 ttggttttagtccctacaaatatagaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaa 50096350  T
Q  270 tat 272  Q
    |||    
T  50096349 tat 50096347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 14602393 - 14602221
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg---gttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||| |||||||       ||    ||||||||||||||||||||| || | |||    
T  14602393 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccctataattttttttttagttttagtccctgcaaatataaaaaaattg 14602294  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatattta 275  Q
    ||||||||||||  |||||||||||| ||||||||||||   | ||||||| | ||||||| | |||||||||    
T  14602293 gttttggtccttgttattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatattta 14602221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 50616937 - 50617042
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat-----nnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||            |||||||||||||||||||||||||||||||    
T  50616937 ggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttatatatatatttttttggttttagtccctgcaaatatagaatatt 50617036  T
Q  201 tggttt 206  Q
    ||||||    
T  50617037 tggttt 50617042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 28032032 - 28031892
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-----gttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||      ||||||||||||||||||||| ||  ||    
T  28032032 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattt 28031933  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  28031932 tggttttggtccttggtattttgttttagtccttgtaaaat 28031892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 272
Target Start/End: Complemental strand, 47829342 - 47829176
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct---atnnnnnnnttggttttagtccctgcaaatatagaatatttggtt 205  Q
    ||||||||| |||| ||||||||||||||||| | ||||||||||||| |||   ||       || ||||||||||||||||||||| || | ||||||    
T  47829342 ttaaatatgaaaattgtccctgcaaatatctgacattttggttttagttcctgtaatttttgtttttgttttagtccctgcaaatataaaaaaattggtt 47829243  T
Q  206 ttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    |||||||||  |||||||||||| ||||||||||||   | ||||||||| ||||||| | ||||||    
T  47829242 ttggtccttgatattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaatat 47829176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 43191723 - 43191794
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || | ||||||||||||||| ||||||||||||| ||||||||||||    
T  43191723 ttggttttagtccctgcaaatataaaaaaattggttttggtccttggtattttgttttagtccttgtaaaat 43191794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 10914090 - 10913988
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||| | ||||||||||||   | ||||||| ||||||||| | |||    
T  10914090 ttggttttagtccctgcaaatataacaaatttggttttggtccttggtattttgtttcagtccttgtaaaattgattcatattggaattggtccttgtaa 10913991  T
Q  270 tat 272  Q
    |||    
T  10913990 tat 10913988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 42155066 - 42154961
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||||||||||||| || |||||||||||||||||  |||||||||||| ||||| ||||||   | ||||||| | ||||||| | |||    
T  42155066 ttggttttagtccctgcaaatataaaaaatttggttttggtccttgatattttgttttagtccttataaaattgattcatattggatttggtccttgtaa 42154967  T
Q  270 tattta 275  Q
    ||||||    
T  42154966 tattta 42154961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 26244861 - 26244794
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| || |||||||||    
T  26244861 ttttagtccctgcaaatatagaaaatttggttttgatccttggtattttgttttagtcattgtaaaat 26244794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 37172246 - 37172386
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||| ||||||||||||| | ||||||||||||||||| |       |     || ||||||||||| |||||||| || |||    
T  37172246 ggcttaaatatgaaaatagtctctgcaaatatctgtcattttggttttagtccctgtaaaaatatatttttgattttagtcccttcaaatataaaaaatt 37172345  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    || ||||| ||||| ||||||||||||||||||||||||||    
T  37172346 tgattttgatccttggtattttgttttaatccttgtaaaat 37172386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 39027548 - 39027607
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaa 229  Q
    |||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||    
T  39027548 ttggttttagtccctgcaaatataaaaaatttggttttgatccttggtattttgttttaa 39027607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 39288224 - 39288292
Alignment:
Q  174 ttttagtccctgcaaatatagaatattt-ggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||| ||||||||||| || |||| ||||||||||||| ||||||||||||| ||||||||||||    
T  39288224 ttttagtcactgcaaatataaaaaattttggttttggtccttggtattttgttttagtccttgtaaaat 39288292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 33873 - 33802
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||| || ||| ||||||| || ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  33873 ttggttttattctctgtaaatataaaaaatttggttttggtccttggtattttattttagtccttgtaaaat 33802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 12322404 - 12322337
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||  | || |||||||||||||||||  |||||||||||| ||||||||||||    
T  12322404 ttttagtccctgcaaattaaaaaaatttggttttggtccttgatattttgttttagtccttgtaaaat 12322337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 39027730 - 39027606
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||| ||   |||| |||||||||| |||       ||     | ||||||||  |||||||||||||||||    
T  39027730 ggcttaaatatggaaatggtccctgcaaatatttgatattttagttttagtccttataaaatattttttttgattttagtctttgcaaatatagaatatt 39027631  T
Q  201 tggttttggtccttagtattttgtt 225  Q
    ||||||| |||||| ||||||||||    
T  39027630 tggttttagtccttggtattttgtt 39027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 52490081 - 52490119
Alignment:
Q  247 catattgaaattggtccctataatatttattttagtcct 285  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52490081 catattgaaattggtccctataatatttattttagtcct 52490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 29584494 - 29584588
Alignment:
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    ||||||| ||| || | |||| ||| |||||| ||||||  | ||||||||| |||||| || ||||||| ||||||||||| ||||||||||||    
T  29584494 ttttggtacttggtgtattgtcttagtccttgcaaaatctattcatattgaagttggtctctctaatattcattttagtccttattttgagggac 29584588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 33618976 - 33619034
Alignment:
Q  183 ctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||  || |||||||||    
T  33618976 ctgcaaatataaaatatttggttttggtcgttggtattttgttttcgtctttgtaaaat 33619034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 44561605 - 44561735
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||| | ||| ||||||||||||||||||  ||||| |||||||| |||| ||||| | | ||| |||||  | |||||| |||||||||| | |||    
T  44561605 ttggtttcaatccttgcaaatatagaatattttattttgatccttagtgttttattttagtacctgt-aaatctattcatattaaaattggtccttgtaa 44561703  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| | |||| |||| | ||||||||||||||    
T  44561704 tattca-tttaatccttagtttgagggactaaa 44561735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 51999546 - 51999622
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccata 250  Q
    |||||||| ||  ||||||| || ||||||||||  |||||  |||||||||||| |||||||||||||||| ||||    
T  51999546 ttttagtctctagaaatataaaaaatttggttttaatccttgatattttgttttagtccttgtaaaatcatttcata 51999622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 42154777 - 42154831
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||||||||||||||||||   | |||||||| ||||||||||||||||||||    
T  42154777 tggcttaaatatggaaatggtcttcgtaaatatct-gcgttttggttttagtccct 42154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 42155134 - 42155085
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttag 155  Q
    |||||||||||| |||| ||||||| ||||||||| | ||||||||||||    
T  42155134 ggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttag 42155085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 43191655 - 43191708
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||||||| |||| |||||||||||||||||   |||| ||||||||||||    
T  43191655 gcttaaatatgaaaattgtccctgcaaatatctgatattttagttttagtccct 43191708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 50096521 - 50096472
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttt 152  Q
    |||||||||||| || |||| ||||||||||||||||| | |||||||||    
T  50096521 tttggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttt 50096472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 10631162 - 10631218
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  10631162 ttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 10631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 24977776 - 24977832
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  24977776 ttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 24977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 40718108 - 40718164
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||    
T  40718108 ttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccct 40718164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 6e-74; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 19157693 - 19157892
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt---ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||       ||   |||||||||||||||||||||||||||||||    
T  19157693 ggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttataattttttttttggttttagtccctgcaaatatagaatatttg 19157792  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19157793 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattcattttagtcctcattttgagggactaaa 19157892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 20757092 - 20757291
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt---ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||       ||   |||||||||||||||||||||||||||||||    
T  20757092 ggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttataattttttttttggttttagtccctgcaaatatagaatatttg 20757191  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  20757192 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattcattttagtcctcattttgagggactaaa 20757291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 42516866 - 42517066
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||       ||     ||||||||||||||||||||||||||||||    
T  42516866 gcttaaatatggaaatggtccctgcaaatatctggcattttggttttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatattt 42516965  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
     |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42516966 agttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggactaa 42517065  T
Q  302 a 302  Q
    |    
T  42517066 a 42517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 302
Target Start/End: Complemental strand, 13426678 - 13426476
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |       ||     ||||||||||||||||||||||||||||    
T  13426678 tggcttaaatatgggaatggtccctgcaaatatctgacgttttagttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatat 13426579  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  13426578 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgaggggct 13426479  T
Q  300 aaa 302  Q
    |||    
T  13426478 aaa 13426476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 104 - 303
Target Start/End: Complemental strand, 34595706 - 34595502
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaata 198  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||       ||     || ||||||||||||||||||||||||    
T  34595706 ttggcttaaatatgaaaatggtccctgtaaatatctgacgttttggttttagtccctataaaaatatttttttggctttagtccctgcaaatatagaata 34595607  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  34595606 tttggttttggtccttggtatattgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcatttcagtcctcattttgagggac 34595507  T
Q  299 taaat 303  Q
    |||||    
T  34595506 taaat 34595502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 24742 - 24540
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-------ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||       ||       |||||||||||||||||| |||||||||    
T  24742 gcttaaatacggaaatggtccccgcaaatatcttgcgttttggttttagtccctataaatttttttttttttggttttagtccctgcaaaaatagaatat 24643  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  24642 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcttattgaaattggtccctataatattcattttagtcctcgttttgagggact 24543  T
Q  300 aaa 302  Q
    |||    
T  24542 aaa 24540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 44219679 - 44219478
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||       ||     |||||||||||||||||| ||||||||||    
T  44219679 ggcttaaatatggaaatagtccctgcaaatatcttgcgttttggttttattccctataaaaatatttttttggttttagtccctgcaaaaatagaatatt 44219580  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| |||||||||||| |||||||||||||    
T  44219579 tggttttggcccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctctagtattcattttagtcctcgttttgagggacta 44219480  T
Q  301 aa 302  Q
    ||    
T  44219479 aa 44219478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 35026442 - 35026643
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg----gttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |       ||     |||||||||| |||||||||||||||||    
T  35026442 tggcttaaatatggaaatggtccctgcaaacatctgacgttttggttttagtccctgtaaaaatttttttttgttttagtccatgcaaatatagaatatt 35026541  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||| || || |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  35026542 tggttttgatcattggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattcattttagtcctcgttttgaaggacta 35026641  T
Q  301 aa 302  Q
    ||    
T  35026642 aa 35026643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 106 - 294
Target Start/End: Original strand, 44483227 - 44483421
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt------ggttttagtccctgcaaatatagaatat 199  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||       ||      | ||||| ||||||||||||||||||||    
T  44483227 ggctttaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaatattttttttgattttaatccctgcaaatatagaatat 44483326  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgag 294  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  44483327 ttggttttagtccttgatattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattcattttagtcctcattttgag 44483421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 40729133 - 40729262
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  40729133 gttttagtccctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatat 40729232  T
Q  273 ttattttagtcctcattttgagggactaaa 302  Q
    | |||||||| |||||||||||||||||||    
T  40729233 tcattttagttctcattttgagggactaaa 40729262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 105 - 302
Target Start/End: Complemental strand, 22365037 - 22364837
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||||||||||| | ||||||||||| || ||||||||||||||  |||       ||     ||||||||||||||||||||||||||||    
T  22365037 tggcttaaatatggaaatggttcttgcaaatatcttgcattttggttttagtctttataaaaatatttttttggttttagtccctgcaaatatagaatat 22364938  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  22364937 ttggttttgatccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggt-cctataatattcattttagtcct-attttgagggact 22364840  T
Q  300 aaa 302  Q
    |||    
T  22364839 aaa 22364837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 19476391 - 19476593
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-------gttttagtccctgcaaatatagaata 198  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||       ||        ||||||||||||||||||||||||||    
T  19476391 ggcttaaatatggaaatggtccctgccaatatttggcgttttggttttagtccctataaaaatattttttttttgttttagtccctgcaaatatagaata 19476490  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||| ||| ||||||  |||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  19476491 tttggttttggttcttggtatttaattttaatc-ttgtaaaatcatttcatattgaagttggtccctataatattcattttagtactcattttgagggac 19476589  T
Q  299 taaa 302  Q
    ||||    
T  19476590 taaa 19476593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 34487140 - 34487341
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||||||  | |||       ||     |||||||||| ||||||||||||||||||    
T  34487140 ggcttaaatatgaaaatggttcctgcaaatatctgccgttttggttttagctcttataaaaatatttttttggttttagtctctgcaaatatagaatatt 34487239  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||| ||| || |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  34487240 tggtttttgtctttggtattttgttttaatcgttgtaaaatcatttcatattgaaattggtctctataatattcattttagtcctcattttgagggacta 34487339  T
Q  301 aa 302  Q
    ||    
T  34487340 aa 34487341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 31579817 - 31579615
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct------atnnnnnnnttggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||| |||||||||| ||||||| ||| |||||||| |||||||| ||      ||       |||||||||||||||||||||||| |||||    
T  31579817 ggcttaaatatagaaatggtccttgcaaatttctagcgttttgattttagtctctctaaaaatattttttttggttttagtccctgcaaatataaaatat 31579718  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||| |||||||| || |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| |||    
T  31579717 ttgattttggtctttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattcattttagtcctcattttgaggtact 31579618  T
Q  300 aaa 302  Q
    |||    
T  31579617 aaa 31579615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 22954647 - 22954526
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||          ||||||| ||||||||||    
T  22954647 ttggttttagtccctgcaaatatagaatatttgattttggtctttggtattttgttttaatccttgtaaaat---------atgaaattagtccctataa 22954557  T
Q  270 tatttattttagtcctcattttgagggacta 300  Q
    |||| |||||| |||||||||||||||||||    
T  22954556 tattcattttaatcctcattttgagggacta 22954526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 19476707 - 19476639
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19476707 gttttagtccctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaat 19476639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 24351 - 24494
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||| |||| ||||| ||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| ||     
T  24351 tttggcttaaatatgaaaatagtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 24450  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||| |||||||| |||| ||||||||||||| ||||||||||||    
T  24451 attgggttttggacctttgtattttgttttattccttgtaaaat 24494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 19158078 - 19157938
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-----gttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||      ||||||||||||||||||||| ||  ||    
T  19158078 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattt 19157979  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||| ||| ||||||||    
T  19157978 tggttttggtccttggtattttgttttagtccctgtaaaat 19157938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 20757477 - 20757337
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-----gttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||      ||||||||||||||||||||| ||  ||    
T  20757477 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattt 20757378  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||| ||| ||||||||    
T  20757377 tggttttggtccttggtattttgttttagtccctgtaaaat 20757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 40729090 - 40729144
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40729090 ggcttaaatatggaaatggtccctgcaaatatctggcgtttttgttttagtccct 40729144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 829994 - 829926
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||| |||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  829994 gtttcagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 829926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 1195174 - 1195106
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||| |||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  1195174 gtttcagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 1195106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 22364656 - 22364791
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt--ggttttagtccctgcaaatatagaatatttggt 204  Q
    |||||||| || |||| ||||||||||||||||| | ||||||||||||||||| |       ||  |||||||||||||||||||||| || ||||||     
T  22364656 gcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaatttttttttggttttagtccctgcaaatataaaaaatttgg- 22364754  T
Q  205 tttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||  |||||||||||| |||||| |||||    
T  22364755 tttggtccttgatattttgttttagtccttgcaaaat 22364791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 40729448 - 40729308
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| |||  |||||||||||| | |||||||||||||||||     |        |||||||||||||||||||||||| || |||    
T  40729448 ggcttaaatatgaaaatagtctttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 40729349  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
     ||||||||||||| || |||||||||| ||||||||||||    
T  40729348 gggttttggtccttggtgttttgttttagtccttgtaaaat 40729308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 42517183 - 42517112
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || ||||| |||| |||||| ||||||||||||| ||||||||||||    
T  42517183 ttggttttagtccctgcaaatataaaaaatttgattttagtccttggtattttgttttagtccttgtaaaat 42517112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 44483542 - 44483471
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| ||  ||||||||||||| || ||||||||||||| ||||||||||||    
T  44483542 ttggttttagtccctgcaaatataaaaattttggttttggtcattggtattttgttttagtccttgtaaaat 44483471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 44219294 - 44219432
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||| |||| ||||||||||||||||| | |||||||||||||| || |       ||     | |||||||||||  ||||||| || |||||    
T  44219294 cttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaatatttttttgtttttagtccctataaatataaaaaatttg 44219393  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  44219394 gttttggtcctttgtattttgttttagtccttgtaaaat 44219432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 22954410 - 22954509
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    ||||||||||||||||||||| || | |||||| ||||||||  |||||||||||| ||||||||||||   | ||||||||| ||||||| | ||||||    
T  22954410 gttttagtccctgcaaatataaaaaaattggttgtggtccttgatattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaatat 22954509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 31579498 - 31579569
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || | ||| ||||||||||| ||||||||||||  ||||||||||||    
T  31579498 ttggttttagtccctgcaaatataaaaaaattgattttggtccttggtattttgtttttgtccttgtaaaat 31579569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 34487454 - 34487387
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| |||||||| || ||||||||| ||||||| ||||||||||||| ||||||||||||    
T  34487454 ttttagtccctccaaatataaaaaatttggtttcggtccttggtattttgttttagtccttgtaaaat 34487387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 34595390 - 34595457
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||  | || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  34595390 ttttagtccctgcaaattaaaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 34595457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 35026760 - 35026689
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||| ||||||| || | |||||||||||||||  |||||||||||| ||||||||||||    
T  35026760 ttggttttagtctctgtaaatataaaaaaattggttttggtccttgatattttgttttagtccttgtaaaat 35026689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 827094 - 827151
Alignment:
Q  104 ttggcttaaatatggaaa-tggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||||||||| |||||| |||||||||||| | ||||| || ||||||||    
T  827094 ttggcttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccct 827151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 829105 - 829162
Alignment:
Q  104 ttggcttaaatatggaaa-tggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||||||||| |||||| |||||||||||| | ||||| || ||||||||    
T  829105 ttggcttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccct 829162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 13426325 - 13426373
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagt 156  Q
    |||||||||  |||| ||||||||||||||||| | |||||||||||||    
T  13426325 cttaaatatcaaaatagtccctgcaaatatctgacattttggttttagt 13426373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 105 - 302
Target Start/End: Complemental strand, 4773 - 4571
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||       ||     |||||||||||||||||||||| |||||    
T  4773 tggcttaaatatggaaatggtccctgcaaatatttgacgttttggttttagtccctataaatttttttttttggttttagtccctgcaaatatataatat 4674  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4673 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggact 4574  T
Q  300 aaa 302  Q
    |||    
T  4573 aaa 4571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 19661734 - 19661533
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       ||     | |||||||||||||||||||||||||||    
T  19661734 ggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaatatt 19661635  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  19661634 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatgttgaaattggtccctataatattcattttagtcttcattttgagggacta 19661535  T
Q  301 aa 302  Q
    ||    
T  19661534 aa 19661533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 30609253 - 30609050
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaata 198  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||       ||     ||||||||||| |||||||||| ||||    
T  30609253 ttggcttaaatatgaaaatggtccctgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccatgcaaatatataata 30609154  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  30609153 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggac 30609054  T
Q  299 taaa 302  Q
    ||||    
T  30609053 taaa 30609050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 5923825 - 5924026
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt------ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       ||      |||||||||||||||||| ||||||||||    
T  5923825 gcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaatattttttttggttttagtccctgcaaaaatagaatatt 5923924  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  5923925 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctagaatattcattttagtcctcgttttgagggacta 5924024  T
Q  301 aa 302  Q
    ||    
T  5924025 aa 5924026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 3345404 - 3345204
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||     ||||||||| |||| |||||||||| |||    
T  3345404 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagttcctgtaaatatagaacatt 3345305  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  3345304 tggttttggtccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttag-cctcgttttgagggacta 3345206  T
Q  301 aa 302  Q
    ||    
T  3345205 aa 3345204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 31717173 - 31717374
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||       ||     ||||||||||| |||||||||||||||||    
T  31717173 ggcttaaatatggaaatggtccctgcaaatatttgacgttttggttttaatccctataaaaatatttttttggttttagtccatgcaaatatagaatatt 31717272  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  31717273 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccatataatattcattttagtcctcattttgagggacta 31717372  T
Q  301 aa 302  Q
    ||    
T  31717373 aa 31717374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 109 - 302
Target Start/End: Complemental strand, 33783780 - 33783581
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct------atnnnnnnnttggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||       ||       |||||||||||||||||||||||||||||||||    
T  33783780 ttaaatatggaaatgatccctgcaaatatctggcgtttcggttttagtccccctaaaaatattttttttggttttagtccctgcaaatatagaatatttg 33783681  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  33783680 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattctttttagtcctcattttgagggactaaa 33783581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 28853480 - 28853684
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct------atnnnnnnnttggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||      ||       ||||||||||||||||||||||||||||    
T  28853480 ttggcttaaatatggaaatggtcactacaaatatttggcgttttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatatagaat 28853579  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggga 297  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  28853580 atttagttttggtccttggtattttgttttaatccttctaaaatcatttcatattgaaattggtccatataatattcattttagtcctcattttgaggga 28853679  T
Q  298 ctaaa 302  Q
    |||||    
T  28853680 ctaaa 28853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 8926186 - 8926386
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||||| | ||||||||||  |||||||||||||||||||||       ||     |||||||||||||||||| |||||||||||    
T  8926186 gcttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatattt 8926285  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  8926286 ggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagagactaa 8926385  T
Q  302 a 302  Q
    |    
T  8926386 a 8926386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 29819453 - 29819585
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29819453 ttggttttagtccctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataa 29819552  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| ||||||||||||||||||||||||||||    
T  29819553 tattcattttagtcctcattttgagggactaaa 29819585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 8936443 - 8936643
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||||| | ||||||||||  |||||||||||||||||||||       ||     |||||||||||||||||| |||||||||||    
T  8936443 gcttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatattt 8936542  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  8936543 ggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagagactaa 8936642  T
Q  302 a 302  Q
    |    
T  8936643 a 8936643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 3484782 - 3484983
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct------atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||| |||||||||||||||  | ||||||||||||||  |      ||       |||||||||||||||||||||||||||||||    
T  3484782 gcttaaatatggaaatgatccctgcaaatatctaacattttggttttagtctgtgtaaaaatattttttttggttttagtccctgcaaatatagaatatt 3484881  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3484882 tggttttggtccttggtattttgttttaatcattgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggacta 3484981  T
Q  301 aa 302  Q
    ||    
T  3484982 aa 3484983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 17238028 - 17238233
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagt--ccctgcaaatatagaa 196  Q
    |||||||||||||||||||| ||||||||||||||||   |||||||||||||||||     ||       |||||||||||  |||| |||||||||||    
T  17238028 ttggcttaaatatggaaatgatccctgcaaatatctgatattttggttttagtccctgcaaaattttttttttggttttagtatccctacaaatatagaa 17238127  T
Q  197 tatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgaggg 296  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  17238128 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtcccaataatattcattttagtcctcattttgaggg 17238227  T
Q  297 actaaa 302  Q
    ||||||    
T  17238228 actaaa 17238233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 302
Target Start/End: Original strand, 16525191 - 16525392
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt--ggttttagtccctgcaaatatagaatatt 200  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||       ||  |||||||||||||||||||||| ||||||    
T  16525191 tttggtttaaatatggaaatagtccctgcaaatatctgacgttttgcttttaatccctataatttttttttggttttagtccctgcaaatataaaatatt 16525290  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||  || || |||||||||||||||||||||||||||||| ||||||||||||| || |||||||| | ||||||||||||||||||||||||||    
T  16525291 tggtttttatctttggtattttgttttaatccttgtaaaatcatttcatattgaaattgatctctataatactcattttagtcctcattttgagggacta 16525390  T
Q  301 aa 302  Q
    ||    
T  16525391 aa 16525392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 5404666 - 5404769
Alignment:
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  5404666 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattcattttagtcctcattttgagggac 5404765  T
Q  299 taaa 302  Q
    ||||    
T  5404766 taaa 5404769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 106 - 272
Target Start/End: Complemental strand, 17238419 - 17238248
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn-----ttggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||| || |||| ||||||||||||||||| | ||||||||||||||||| |            ||||||||||||||||||||||||||| |||    
T  17238419 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaataattttttggttttagtccctgcaaatatagaaaatt 17238320  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    |||||||||||||| ||||||||||||| ||||||||||||   | ||||||||| ||||||| | ||||||    
T  17238319 tggttttggtccttggtattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaatat 17238248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 5404955 - 5404815
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||| ||||       ||     | |||||||||||||||||||| || |||    
T  5404955 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaatatttttttgattttagtccctgcaaatataaaaaatt 5404856  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  5404855 tggttttggtcattagtattttgttttagtccttgtaaaat 5404815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 30608933 - 30609004
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  30608933 ttggttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 30609004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 272
Target Start/End: Original strand, 19661346 - 19661518
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatat 199  Q
    |||||||||||||| |||| ||||||||||||||||| | |||||||||||||  || |       ||    |||||||||||||||||||||| || ||    
T  19661346 ttggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtttctgtaaaaatattttttggttttagtccctgcaaatataaaaaat 19661445  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    ||| ||||||||||| ||||||||||||| || |||||||||   | ||||||||| ||||||| | ||||||    
T  19661446 ttgattttggtccttggtattttgttttagtctttgtaaaattgattcatattgaatttggtccttgtaatat 19661518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 29819413 - 29819467
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29819413 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 29819467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 16525506 - 16525438
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||    
T  16525506 gttttagtccctgtaaatataaaaaatttggttttggtccttcgtattttgttttaatccttgtaaaat 16525438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 26272365 - 26272225
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt-----tggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||| ||||||||| | |||||||||||||||||||       |     |||||||||| |||||||||||| || |||    
T  26272365 ggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagtccctataaaaatatatttttggttttagttcctgcaaatataaaaaatt 26272266  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    || ||||||||||| |||| |||||||| ||||||||||||    
T  26272265 tgattttggtccttggtatattgttttagtccttgtaaaat 26272225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 28853870 - 28853730
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||| ||| |||| |||||| |||||||||| | |||||||||||||||||||       ||     ||||||||| |||||||||||| || |||    
T  28853870 ggcttaaacatgaaaatagtccctacaaatatctgacattttggttttagtccctataaaaatatttttttggttttagttcctgcaaatataaaaaatt 28853771  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  28853770 tggttttggtccttgatattttgttttagtccttgtaaaat 28853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 31717491 - 31717420
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||| ||||||||||||    
T  31717491 ttggttttagtccctgcaaatataacaaatttggttttggtccttggtattttgttttagtccttgtaaaat 31717420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 8926577 - 8926432
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||| |||| ||||| | ||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| ||     
T  8926577 tttggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 8926478  T
Q  198 atttggttttggtccttag--tattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||| |  |||||||||||| ||||||||||||    
T  8926477 atttggttttggtcctttgtatattttgttttagtccttgtaaaat 8926432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 8936834 - 8936689
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||| |||| ||||| | ||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| ||     
T  8936834 tttggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 8936735  T
Q  198 atttggttttggtccttag--tattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||| |  |||||||||||| ||||||||||||    
T  8936734 atttggttttggtcctttgtatattttgttttagtccttgtaaaat 8936689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 3345090 - 3345158
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| | ||||||||||    
T  3345090 gttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttacttcttgtaaaat 3345158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 5924140 - 5924072
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| |||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  5924140 gttttagtccctacaaatataaaaaatttggttttggtcctttgtattttgttttagtccttgtaaaat 5924072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 3485159 - 3485019
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||| || |||| |||||||||||||| || | |||||||||||||||||     |        ||| |||||||||||||||||||| || |||    
T  3485159 ggcttaaatgtgaaaatagtccctgcaaatatgtgacattttggttttagtccctgcaaaaatatttttttgattttagtccctgcaaatataaaaaatt 3485060  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  3485059 tggttttggtctttggtattttgttttagtccttgtaaaat 3485019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 5140690 - 5140796
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||        ||     | |||||||||||||||||||| ||||||||    
T  5140690 cttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctacaaaaatatttttttgattttagtccctgcaaatatataatatttg 5140789  T
Q  203 gttttgg 209  Q
    |||||||    
T  5140790 gttttgg 5140796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 5404601 - 5404654
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5404601 ttaaatatggaaatggtccctgcaaatatctggcattttgattttagtccctat 5404654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 9571781 - 9571641
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| |||| |||||||||||| | |||| ||||||||||||     |        |||||||||||||||||||||||  || |||    
T  9571781 ggcttaaatatgaaaatagtccttgcaaatatctgacattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatgaaaaatt 9571682  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    || ||||| ||||| ||||||||||||| ||||||||||||    
T  9571681 tgattttgatccttcgtattttgttttagtccttgtaaaat 9571641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 29819698 - 29819631
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||  ||||||||| || |||||||||||||| || ||||||||||||| ||||||||||||    
T  29819698 ttttagtccaagcaaatataaaaaatttggttttggtcattggtattttgttttagtccttgtaaaat 29819631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 33783467 - 33783557
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtcc 263  Q
    |||||||||| |||||||||| || ||||||||||||| |||  |||||||||||  ||||||||||||   | ||||||||| |||||||    
T  33783467 gttttagtccttgcaaatataaaaaatttggttttggttcttgatattttgtttttgtccttgtaaaattgattcatattgaatttggtcc 33783557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 5409280 - 5409170
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat-----nnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||| ||||            ||| |||||||||||||||||||| || |||    
T  5409280 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaatatttttttgattttagtccctgcaaatataaaaaatt 5409181  T
Q  201 tggttttggtc 211  Q
    |||||||||||    
T  5409180 tggttttggtc 5409170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 24638903 - 24638851
Alignment:
Q  14 agacaagaatcattatttataacgccacaccgaaacaagttatcctttgttga 66  Q
    ||||||||||||||| ||||||| |||| ||||| ||||||||| ||||||||    
T  24638903 agacaagaatcattagttataactccacgccgaagcaagttatcttttgttga 24638851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 5924210 - 5924159
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||||| |||| ||||||||||||||||| | ||||||||||||| |||    
T  5924210 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcct 5924159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 1214712 - 1214752
Alignment:
Q  122 tggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||||||| | || |||||||||||||||||||    
T  1214712 tggtccctgcaaatatgtcgcattttggttttagtccctat 1214752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 6564598 - 6564638
Alignment:
Q  122 tggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||||||| |  |||||||||||||||||||||    
T  6564598 tggtccctgcaaatatgtctcgttttggttttagtccctat 6564638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 109 - 302
Target Start/End: Complemental strand, 7877707 - 7877508
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt------ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||       ||      |||||||||||||||||||||||||||||||    
T  7877707 ttaaatatgaaaatggtccctgcaaatatctggcgttttggttctagtccctataaaaatattttttttggttttagtccctgcaaatatagaatatttg 7877608  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  7877607 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattgaaccctataatatttattttagtcctcattttgagggactaaa 7877508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 19204589 - 19204791
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||       ||     ||||||||||||||||||||||||||||    
T  19204589 tggcttaaatatggaaatggtccctgcaaatatttagcgttttgattttagtccttataaaaatatttttttggttttagtccctgcaaatatagaatat 19204688  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  19204689 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattctagtcctcattttgagggact 19204788  T
Q  300 aaa 302  Q
    |||    
T  19204789 aaa 19204791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 14379497 - 14379297
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       ||     ||||||||||| |||||| |||||||||||    
T  14379497 gcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaatatttttttggttttagtccttgcaaaaatagaatattt 14379398  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    |||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14379397 ggtttttgtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaa 14379298  T
Q  302 a 302  Q
    |    
T  14379297 a 14379297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 13572470 - 13572670
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg----gttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||     ||||||||||||||||||||||||| |||    
T  13572470 ggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccctataaaaatatttttttgttttagtccctgcaaatatagaatgttt 13572569  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  13572570 ggttttggtccttggtattttgttttaatccttgtaaaatcatttcatgttgaaattggttcttataatattcattttagtcctcattttgagggactaa 13572669  T
Q  302 a 302  Q
    |    
T  13572670 a 13572670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 18369397 - 18369197
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||       ||    ||||||||||||||||||||||||||||||    
T  18369397 ggcttaaatatggaaatgatacctgcaaatatctggcgttttggttttagtccctataaaaatattttttggttttagtccctgcaaatatagaatattt 18369298  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    |||||||||| ||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  18369297 ggttttggtcattgatattttgttttaatccttgtaaaatcatttcatattgagattggtccctataatattcattttagtccttattttgagggactaa 18369198  T
Q  302 a 302  Q
    |    
T  18369197 a 18369197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 38873473 - 38873671
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn---ttggttttagtccctgcaaatatagaatatttgg 203  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||          ||||||||||||| ||||||||||||||||||||    
T  38873473 gcttaaatatggaaatggtccctccaaatatctaacgttttggttttagtccctataaaaaaaaatttggttttagtccttgcaaatatagaatatttgg 38873572  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  38873573 ttttggtccttggtattttgttttaattcttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttaagggactaaa 38873671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 3371302 - 3371501
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||||||| |       ||     ||||||||| ||||||||||||||||||||     
T  3371302 cttaaatatggaaatggtccaggtaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaatattta 3371401  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3371402 gttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaa 3371501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 12806546 - 12806748
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnt------tggttttagtccctgcaaatatagaatat 199  Q
    |||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||       |      | |||||||||||||||||||||||||||    
T  12806546 ggcttaaatatggaaatggtccttgtaaatatttggcgttttggatttagtccctataaaaatatatttttttgttttagtccctgcaaatatagaatat 12806645  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12806646 ttggttttgatccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggact 12806745  T
Q  300 aaa 302  Q
    |||    
T  12806746 aaa 12806748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 29683174 - 29683373
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       ||     |||||||| ||||||||||||||||||||    
T  29683174 ggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagcccctgcaaatatagaatatt 29683273  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||| || |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  29683274 tggttt-ggcccttggtattttgttttaatccttgtaaaatcatttcatattgaaattgg-ccctataatattcattttagtcctcattttgagggacta 29683371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 41594335 - 41594135
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| |||||||    
T  41594335 gcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaatattt 41594236  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    |||||||||| ||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  41594235 ggttttggtcattgatattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattcattttagtcctcattttgagggactaa 41594136  T
Q  302 a 302  Q
    |    
T  41594135 a 41594135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 2395155 - 2395356
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||       ||     |||||||||||||||||||||||||||||    
T  2395155 ggcttaaatatggaaatggtcactgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatt 2395254  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||| |||||| ||||||| ||||| |||||||||||||||| ||||||||||||| || |||||||||| ||||||| ||||||||||||||||||    
T  2395255 tggttttagtccttggtattttattttagtccttgtaaaatcatttcatattgaaattgatctctataatattcattttagccctcattttgagggacta 2395354  T
Q  301 aa 302  Q
    ||    
T  2395355 aa 2395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 6164283 - 6164082
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||| |||| |||||| |||||||||||||||| ||||| |||||||       ||     |||||||||||| ||||||||||||||||    
T  6164283 ggcttaaatatggatatggcccctgctaatatctggcgttttgattttaatccctataaaaatatttttttggttttagtcccagcaaatatagaatatt 6164184  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||| |||||||||||||    
T  6164183 tggttttggtccttagtattttgttttaatccttgtaaaatcatttcatattgaaattagtccttataatattcattttagtcctcgttttgagggacta 6164084  T
Q  301 aa 302  Q
    ||    
T  6164083 aa 6164082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 28921192 - 28921392
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||| |||||||||||||||||||||||||||  |||||||| |||||||||||       ||    ||||||||||||||||||||||||||||||    
T  28921192 ggcttaactatggaaatggtccctgcaaatatctgatgttttggtattagtccctataaaaatattttttggttttagtccctgcaaatatagaatattt 28921291  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    | ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||| |||||||||||| ||||||||||||||    
T  28921292 gattttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaactggtctttataatattcattttagtcctcgttttgagggactaa 28921391  T
Q  302 a 302  Q
    |    
T  28921392 a 28921392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 30432980 - 30432779
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||||||| ||    
T  30432980 ggcttaaatatggaaatggtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatttt 30432881  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  30432880 tggttttggtctttgttattttgttttaatccttgtaaaatcatttcatattgaaattggtgcttataatattcattttagtcctcattttgagggacta 30432781  T
Q  301 aa 302  Q
    ||    
T  30432780 aa 30432779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 37609340 - 37609140
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |       ||     |||||||||||||||||||||||||||||    
T  37609340 ggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatatt 37609241  T
Q  201 tggttttggtccttagtattttg-ttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggact 299  Q
    |||||||||||||| || ||| | |||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37609240 tggttttggtccttggtttttagtttttaatccttgtaaaat-atttcatattgaaattggt-cctataatattcattttagtcctcattttgagggact 37609143  T
Q  300 aaa 302  Q
    |||    
T  37609142 aaa 37609140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 6880357 - 6880157
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||| ||||||  |||||||||||||||||| |||||||| |||       ||     |||||||||| |||||||||||||||||||    
T  6880357 gcttaaatatggaaatagtccctataaatatctggcgttttggatttagtccttataaaaatatttttttggttttagtctctgcaaatatagaatattt 6880258  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||| |||    
T  6880257 ggttttggtccttggtattttgttttaatcattgtaaaatcatttcgtattgaaattggtccccataatattcattttagtcctcattttgagggattaa 6880158  T
Q  302 a 302  Q
    |    
T  6880157 a 6880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 17458102 - 17457902
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    ||||||||||| ||||||| ||||||||||||| | ||||| ||||||||||||||       ||     ||||||| || ||||||||||| |||||||    
T  17458102 gcttaaatatgaaaatggttcctgcaaatatctagtgttttcgttttagtccctataaaaatatttttttggttttaatctctgcaaatataaaatattt 17458003  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
     |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17458002 agttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtccttattttgagggactaa 17457903  T
Q  302 a 302  Q
    |    
T  17457902 a 17457902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 10748876 - 10748678
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnn--ttggttttagtccctgcaaatatagaatatttgg 203  Q
    |||||||||||||||||| | ||| ||||||| |||||||||| ||||||||| |||         |||||||||||||| | |||||||||||||||||    
T  10748876 ggcttaaatatggaaatgattcctacaaatatttggcgttttgattttagtccttataaaaaaaaattggttttagtcccagtaaatatagaatatttgg 10748777  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||    
T  10748776 ttttggtcattggtattttgttttaatccttgtaaaatcatttcatattgaaattggtctctataatattcattttagtcctcattttgatgaactaaa 10748678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 4171597 - 4171724
Alignment:
Q  175 tttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatattt 274  Q
    |||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  4171597 tttagtccctgcaaatatagaacatttggttttggtctttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattc 4171696  T
Q  275 attttagtcctcattttgagggactaaa 302  Q
    |||||||||||||||||||| |||||||    
T  4171697 attttagtcctcattttgagagactaaa 4171724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 3948680 - 3948548
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||  |||||    
T  3948680 ttggttttagtccctgcaaatatagaatatttggttttggtcctttatattttgttttaatccttgtaaaatcatttcatattgaaattggtcattataa 3948581  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| ||||||||||||||||| |||| |||||    
T  3948580 tattcattttagtcctcatttttagggtctaaa 3948548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 33940993 - 33940861
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  33940993 ttggttttagtccctgcaaatatagaatatttggttttggtcattgatattttgttttaatccttataaaatcatttcatattgaaattggtccctataa 33940894  T
Q  270 tatttattttagtcctcattttgagggactaaa 302  Q
    |||| ||||||||| | ||||||||||||||||    
T  33940893 tattcattttagtctttattttgagggactaaa 33940861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 32521471 - 32521674
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct------atnnnnnnnttggttttagtccctgcaaatatagaata 198  Q
    ||||||||||||||||||||| || | |||||| || ||||||||||||||||| |      ||       ||||||||||||| || ||||||| ||||    
T  32521471 tggcttaaatatggaaatggttccggtaaatatatgacgttttggttttagtccttctaaaaatattttttttggttttagtccttgtaaatataaaata 32521570  T
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    ||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  32521571 tttggttttggtctttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccttataatattcattttagtcttcattttgagggac 32521670  T
Q  299 taaa 302  Q
    ||||    
T  32521671 taaa 32521674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 42705053 - 42705151
Alignment:
Q  204 ttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42705053 ttttggtccttcgtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaa 42705151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 25318680 - 25318518
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatat 199  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |       ||     | |||||||| || ||||||||||||||    
T  25318680 tggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttgattttagtctctacaaatatagaatat 25318581  T
Q  200 ttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtc 262  Q
    ||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  25318580 ttgattttggtctttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtc 25318518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 30771149 - 30771246
Alignment:
Q  184 tgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttag 281  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  30771149 tgcaaaaatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttag 30771246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 29683558 - 29683419
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||||||| ||||||||||||||||| | ||||| ||||||||||| |       ||     |||||||||||||||||||||| || ||||    
T  29683558 gcttaaatatggaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattt 29683459  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  29683458 ggttttggtccttggtattttgttttagtccttgtaaaat 29683419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 18369011 - 18369151
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| || |||    
T  18369011 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttgggttttagtccctgcaaatataaaaaatt 18369110  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  18369111 tggttttggtctttggtattttgttttagtccttgtaaaat 18369151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 7877391 - 7877462
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  7877391 ttggttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 7877462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 4171841 - 4171739
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||| ||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||| | | ||||||| | ||||||| | |||    
T  4171841 ttggttttagtcccagcaaatataaaaaatttggttttggtccttggtaatttgttttaatccttgtaaaattaattcatattggatttggtccttgtaa 4171742  T
Q  270 tat 272  Q
    |||    
T  4171741 tat 4171739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 3948431 - 3948502
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||| ||||||||||||    
T  3948431 ttggttttagtccctgcaaatataaaaaatttggtttcggtccttggtattttgttttagtccttgtaaaat 3948502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 12806934 - 12806794
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccc-----tatnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||  | ||||||||||||||||      |        |||||||||||| ||||||||||| || |||    
T  12806934 ggcttaaatatgaaaattgtccctgcaaatatctaacattttggttttagtccccgtaaaaatatttttttggttttagtcactgcaaatataaaaaatt 12806835  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  12806834 tggttttggtccttggtattttgttttagtccttgtaaaat 12806794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 28921578 - 28921438
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| |||||||||||||| || | ||||||||||| |||||     |        |||||||||||||||||||||||| || |||    
T  28921578 ggcttaaatatgaaaatagtccctgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 28921479  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  28921478 tggttttggtccttgatattttgttttagtccttgtaaaat 28921438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 6880040 - 6880142
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||| ||| ||||||||   | ||||||| | ||||||| |||||    
T  6880040 ttggttttagtccctgcaaatataaaaaatttgattttggtccttggtattttgttttagtccatgtaaaatttattcatattggatttggtccttataa 6880139  T
Q  270 tat 272  Q
    |||    
T  6880140 tat 6880142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 19204904 - 19204838
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaa 240  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||    
T  19204904 ttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttaatacttgtaaaa 19204838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 3371615 - 3371547
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||| ||||||||||||    
T  3371615 gttttagtccctgcaaatataaaaaatttggttttgatccttggtattttgttttagtccttgtaaaat 3371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 14379114 - 14379251
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttgg 203  Q
    ||||||||| |||| |||| |||||||||||| | ||||||||||||||||| |       ||     ||||||||||||||||||| || || ||||||    
T  14379114 ttaaatatgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatgtaaaaaatttgg 14379213  T
Q  204 ttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| |||||||| |||| ||||||||||||    
T  14379214 ttttggtcctttgtattttgatttagtccttgtaaaat 14379251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 10748561 - 10748632
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||| |||||||||||||| || ||||||||||||||||| ||| ||||||||| ||||||||||||    
T  10748561 ttggttttaatccctgcaaatataaaaaatttggttttggtccttggtactttgttttagtccttgtaaaat 10748632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 41594018 - 41594089
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||| || |||||||||    
T  41594018 ttggttttagttcctgcaaatatagaaaatttggttttggtccttgatattttgttttagtctttgtaaaat 41594089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 42705268 - 42705197
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||  |||||||||| || |||||||||||| |||| ||||||||||||||||||||||||||    
T  42705268 ttggttttagtcagtgcaaatataaaaaatttggttttggaccttggtattttgttttaatccttgtaaaat 42705197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 2395542 - 2395402
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct-----atnnnnnnnttggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||||||     |        || |||||| |||||||||||||| || |||    
T  2395542 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttttgttttaatccctgcaaatataaaaaatt 2395443  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    || |||||||||||  |||||||||| | ||||||||||||    
T  2395442 tgattttggtccttgatattttgtttaagtccttgtaaaat 2395402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 17457789 - 17457887
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatat 272  Q
    ||||||| |||||||||||| || ||| |||||||||||||  |||||||||||| |||||||||||| | | ||||||| | ||||||| | ||||||    
T  17457789 ttttagttcctgcaaatataaaaaattaggttttggtccttgatattttgttttagtccttgtaaaattaattcatattggatttggtccttgtaatat 17457887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 37609028 - 37609094
Alignment:
Q  175 tttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||| |||||||||| || ||||||||||||||||| ||||||||||||  ||||||||||||    
T  37609028 tttagtccttgcaaatataaaaaatttggttttggtccttggtattttgtttttgtccttgtaaaat 37609094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 42704987 - 42705036
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttag 155  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  42704987 ggcttaaatatgaaaatggtccctgcaaatatctggcgttttgcttttag 42705036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 32521788 - 32521720
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||| |||||||||||||| || |||||||||||||||||  |||||||||||  ||||||||||||    
T  32521788 gttttaatccctgcaaatataaaaaatttggttttggtccttgatattttgtttttgtccttgtaaaat 32521720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 33940751 - 33940819
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||| |||||||||||| || |||||||||||||||||  |||||||||||  ||||||||||||    
T  33940751 gttttagttcctgcaaatataaaaaatttggttttggtccttgatattttgtttttgtccttgtaaaat 33940819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 6163969 - 6164036
Alignment:
Q  174 ttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||| ||| ||||||||||| || |||| |||||||||||| ||||||||||||| ||||||||||||    
T  6163969 tttttgtctctgcaaatataaaaaatttagttttggtccttggtattttgttttagtccttgtaaaat 6164036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 30432594 - 30432733
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||| || |||| ||||||||||||||||| | ||||||||||||||||| |       ||     | |||||||||||| ||| | | || |||    
T  30432594 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaagtatttttttgattttagtccctgtaaaaacaaaa-att 30432692  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  30432693 tggttttggtccttggtattttgttttagtccttgtaaaat 30432733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 6879998 - 6880054
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||||| |||| |||||| |||||||||| | |||||||||||||||||    
T  6879998 ttggcttaaatatgaaaattgtccctacaaatatctgacattttggttttagtccct 6880054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 13278062 - 13278110
Alignment:
Q  106 ggcttaaatatggaaatggtccc-tgcaaatatctggcgttttggtttt 153  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  13278062 ggcttaaatatggaaatggtcccctgcaaatatctgacgttttggtttt 13278110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 13572787 - 13572716
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||| || ||||| ||||||  ||| |||| |||||||| ||||||||||||    
T  13572787 ttggttttagtcccagcaaatataaaaaatttgattttggcactttgtatattgttttagtccttgtaaaat 13572716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 35510990 - 35510901
Alignment:
Q  184 tgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatt 273  Q
    |||||||||||| | ||| |||||| |||||||| ||||||| || ||| |||||||||  | |||||| |||||| | |||||||||||    
T  35510990 tgcaaatatagatttttttgttttgatccttagtgttttgttctagtccatgtaaaatctattcatattaaaattgattcctataatatt 35510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 25318383 - 25318485
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataa 269  Q
    |||||||||||  | ||||||||| || | |||||||||||||||  |||||||||||  ||||| ||||||   | ||||||||| ||||||| | |||    
T  25318383 ttggttttagtttcagcaaatataaaaaaattggttttggtccttgatattttgtttttgtccttataaaattgattcatattgaatttggtccttgtaa 25318482  T
Q  270 tat 272  Q
    |||    
T  25318483 tat 25318485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 160
Target Start/End: Complemental strand, 30215855 - 30215817
Alignment:
Q  122 tggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  30215855 tggtccctgcaaatatatcgcgttttggttttagtccct 30215817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 33940679 - 33940733
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||| |||| ||||||||||||||||  | ||||| |||||||||||    
T  33940679 ggcttaaatatgaaaatagtccctgcaaatatcttacattttgattttagtccct 33940733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 42695866 - 42695924
Alignment:
Q  104 ttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||| ||||||||   |||||||||||||||| |  |||||||||||||||||||||    
T  42695866 ttggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctat 42695924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 10748493 - 10748546
Alignment:
Q  107 gcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||||||| |||| ||| ||||||| ||||| | |||||||||||||||||    
T  10748493 gcttaaatatgaaaatagtctctgcaaacatctgacattttggttttagtccct 10748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 42705335 - 42705286
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 157  Q
    |||||||||| |||| ||||||||||||||||| | |||||| |||||||    
T  42705335 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtc 42705286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 3948747 - 3948695
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcccta 161  Q
    |||||||||||||||||||    ||||||||| |||||| |||||||||||||    
T  3948747 ttaaatatggaaatggtcctcataaatatctgacgttttagttttagtcccta 3948695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 4171907 - 4171859
Alignment:
Q  109 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 157  Q
    |||||| || |||| ||||||||||||||||| | ||||||||||||||    
T  4171907 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtc 4171859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 19204978 - 19204926
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    |||||||||||| |||| ||||||| ||||||| | | |||||||||||||||    
T  19204978 ggcttaaatatgaaaatagtccctgtaaatatccgtcattttggttttagtcc 19204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 106 - 295
Target Start/End: Original strand, 3981 - 4175
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||     |||||||||||||| |||||||||| |||    
T  3981 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaaaatt 4080  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagg 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  4081 tggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattcattttagtcctcgttttgagg 4175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 4367 - 4227
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||||||||||| |       ||     |||||||||||||||||||||| || |||    
T  4367 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 4268  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  4267 tggttttggtccttggtattttgttttagtccttgtaaaat 4227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 129; Significance: 9e-67; HSPs: 3)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 103 - 302
Target Start/End: Complemental strand, 43666 - 43461
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaat 197  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||       ||     ||||||||||||||||||||||||||    
T  43666 tttggcttaaatatggaaatggttcttgcaaatatctggcgttttggttttagttcctataaatttttttttttggttttagtccctgcaaatatagaat 43567  T
Q  198 atttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggt-ccctataatatttattttagtcctcattttgaggg 296  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  43566 atttggttttgatccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtcccctataatattcattttagtcctcattttgaggg 43467  T
Q  297 actaaa 302  Q
    ||||||    
T  43466 actaaa 43461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 43347 - 43415
Alignment:
Q  173 gttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| | ||||||||||    
T  43347 gttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtacttgtaaaat 43415  T

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Target: scaffold0103; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 43275 - 43329
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    ||||||||| || |||| |||||||||||||| || | |||||||||||||||||    
T  43275 ggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccct 43329  T

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Target: scaffold0006 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 212797 - 212596
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    ||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||       ||     |||||||||||||||||||||||||||||    
T  212797 ggcttaaatatggaaatggtccccgtaaatatctgatgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatt 212698  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  212697 tggttttggtctttcgtattttgttttaatccttgtaaaatcatttcatattgaaattggttcctataatattcattttagtcctcattttgagggacta 212598  T
Q  301 aa 302  Q
    ||    
T  212597 aa 212596  T

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Target: scaffold0006; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 212479 - 212550
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||| |||||||||||||  | ||  |||||||||||||||| ||||||||||||| ||||||||||||    
T  212479 ttggtttaagtccctgcaaattaaaaaattttggttttggtccttggtattttgttttagtccttgtaaaat 212550  T

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Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 212410 - 212464
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||| |||| ||||| ||||||||| | | |||||||||||||||||    
T  212410 ggcttaaatatgaaaatagtccccgcaaatatcagacattttggttttagtccct 212464  T

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Target: scaffold0021 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 108 - 303
Target Start/End: Original strand, 118029 - 118228
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatttg 202  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||       ||     ||||||||||||||||||||||||||||||     
T  118029 cttaaatatggaaatggtccctgtaaatatctggcgttttggatttagtccccatataaatatttttttggttttagtccctgcaaatatagaatattta 118128  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
     ||||| ||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  118129 attttgatcctttgtattttgttttaatcct-gtaaagtcatttcatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 118227  T

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Target: scaffold0021; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 118348 - 118277
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  118348 ttggttttagtcactgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 118277  T

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Target: scaffold0126 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 36378 - 36178
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg----gttttagtccctgcaaatatagaatattt 201  Q
    |||||||||||  |||| ||||||||||||||||| |||||| ||||||||||||||       ||     |||||||| ||||||||||||||||||||    
T  36378 ggcttaaatataaaaatagtccctgcaaatatctgacgttttagttttagtccctataaaattatttttttgttttagttcctgcaaatatagaatattt 36279  T
Q  202 ggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaa 301  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  36278 ggttttgatccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccttataatattcattttagtcctcgttttgagggactaa 36179  T
Q  302 a 302  Q
    |    
T  36178 a 36178  T

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Target: scaffold0126; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 36061 - 36132
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    ||||||||||||| |||||||||| || ||||| |||||||| ||  |||||||||||| ||||||||||||    
T  36061 ttggttttagtccttgcaaatataaaaaatttgattttggtctttgatattttgttttagtccttgtaaaat 36132  T

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Target: scaffold0170 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 8927 - 8726
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttg-----gttttagtccctgcaaatatagaatatt 200  Q
    |||| |||||||||||||||||| | | |||| ||||||||||| ||||||||||||       ||      ||||||||||||||||||||||||||||    
T  8927 ggctgaaatatggaaatggtccccgtatatatttggcgttttggatttagtccctataaaaatattttttttgttttagtccctgcaaatatagaatatt 8828  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggacta 300  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  8827 tggttttgatccttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccctaaaatattcattttaatcctcattttgagggacta 8728  T
Q  301 aa 302  Q
    ||    
T  8727 aa 8726  T

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Target: scaffold0170; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 8609 - 8680
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  8609 ttggttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 8680  T

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Target: scaffold0170; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 8538 - 8594
Alignment:
Q  105 tggcttaaatatggaaatggtccctgcaaatatctggcgttttgg-ttttagtccct 160  Q
    ||||||||||||| |||| ||||||||||||||||  | |||||| |||||||||||    
T  8538 tggcttaaatatgaaaattgtccctgcaaatatctaacattttggtttttagtccct 8594  T

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Target: scaffold0147 (Bit Score: 94; Significance: 7e-46; HSPs: 3)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 106 - 279
Target Start/End: Original strand, 25121 - 25299
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnntt-----ggttttagtccctgcaaatatagaatatt 200  Q
    |||||||||||| ||||||||||   |||||| || |||||||||||||||||||||       ||     |||||||||||||| ||||||||||||||    
T  25121 ggcttaaatatgaaaatggtcccaataaatatttgacgttttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatatt 25220  T
Q  201 tggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttatttt 279  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  25221 tggttttggtccttcgtattttgttttaatccttgtaaaatcatttcatattgaaattggttcctataatattcatttt 25299  T

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Target: scaffold0147; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 25427 - 25356
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||  | ||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  25427 ttggttttagtccctgcaaattaaaaatttttggttttggtccttggtattttattttagtccttgtaaaat 25356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 25521 - 25467
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||||| |||| ||||| |||||||||||   |||||||||||||||||    
T  25521 ggcttaaatatgaaaatagtccccgcaaatatctgatattttggttttagtccct 25467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 199 - 302
Target Start/End: Complemental strand, 37052 - 36949
Alignment:
Q  199 tttggttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggac 298  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  37052 tttggttttggtccttggtattttgttttaatccttgtaaaattatttcatattgaaattggtccctataatattcattttagtcctcgttttgagggac 36953  T
Q  299 taaa 302  Q
    ||||    
T  36952 taaa 36949  T

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Target: scaffold0137; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 36765 - 36903
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct---atnnnnnnnttggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||||||   |        |||||||||||||||||||||||| || |||||    
T  36765 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgaaaatatttttttggttttagtccctgcaaatataaaaaatttg 36864  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  36865 gttttggtccttggtattttgttttagtccttgtaaaat 36903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 37120 - 37064
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctat 162  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37120 ggcttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctat 37064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 103 - 302
Target Start/End: Original strand, 73928 - 74114
Alignment:
Q  103 tttggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctatnnnnnnnttggttttagtccctgcaaatatagaatatttg 202  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||       ||  |||            ||| | ||||||||    
T  73928 tttggcttaaatatggaaatggtccctgcaaatatccggcgttttggttttattccctataaaaatattttttt------------ataaa-aatatttg 74014  T
Q  203 gttttggtccttagtattttgttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattttgagggactaaa 302  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||| ||| |||||||||||||||| ||||||||| || || ||||||||||||    
T  74015 gttttggtccttcgtattttgttttaatccttataaaatcatttcatattaaaactggtccctataatattcattttagtcatcgttatgagggactaaa 74114  T

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Target: scaffold0028; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 74230 - 74159
Alignment:
Q  170 ttggttttagtccctgcaaatatagaatatttggttttggtccttagtattttgttttaatccttgtaaaat 241  Q
    |||||||||||||||||||||||| || |||||| |||||||||| ||||||||||||| ||||||||||||    
T  74230 ttggttttagtccctgcaaatataaaaaatttggctttggtccttggtattttgttttagtccttgtaaaat 74159  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 43908 - 43960
Alignment:
Q  106 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtcc 158  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  43908 ggcttaaatatggaaatagtcccggcaaatatctgtcgttttggttttagtcc 43960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 44051 - 43999
Alignment:
Q  108 cttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccct 160  Q
    |||||||||  |||| |||||||||||||| || | |||||||||||||||||    
T  44051 cttaaatataaaaatagtccctgcaaatatttgacattttggttttagtccct 43999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 11299 - 11365
Alignment:
Q  224 ttttaatccttgtaaaatcattccatattgaaattggtccctataatatttattttagtcctcattt 290  Q
    ||||| ||||||| |||||||| ||||| |||||||||| ||| |||||||||||||||||| ||||    
T  11299 ttttagtccttgtgaaatcatttcatatcgaaattggtctctacaatatttattttagtccttattt 11365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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