View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16309_high_7 (Length: 205)

Name: NF16309_high_7
Description: NF16309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16309_high_7
NF16309_high_7
[»] chr8 (43 HSPs)
chr8 (6-176)||(21389237-21389407)
chr8 (6-175)||(21395768-21395937)
chr8 (6-175)||(21790261-21790430)
chr8 (3-183)||(17353715-17353894)
chr8 (3-183)||(19899257-19899436)
chr8 (3-183)||(16184890-16185069)
chr8 (51-181)||(19976654-19976784)
chr8 (33-183)||(24755912-24756062)
chr8 (3-183)||(19983255-19983434)
chr8 (3-178)||(23776617-23776792)
chr8 (3-181)||(21161838-21162015)
chr8 (2-183)||(21168499-21168679)
chr8 (136-183)||(22113507-22113554)
chr8 (136-183)||(22135010-22135057)
chr8 (136-183)||(22166160-22166207)
chr8 (136-183)||(23846794-23846841)
chr8 (137-183)||(17055168-17055214)
chr8 (130-183)||(19259379-19259432)
chr8 (127-183)||(20465817-20465873)
chr8 (127-183)||(22010457-22010513)
chr8 (136-183)||(15538728-15538775)
chr8 (136-183)||(17828362-17828409)
chr8 (136-183)||(20856203-20856250)
chr8 (136-183)||(24434016-24434063)
chr8 (136-183)||(39094720-39094767)
chr8 (136-179)||(43252093-43252136)
chr8 (125-183)||(30643069-30643127)
chr8 (137-183)||(32598959-32599005)
chr8 (137-183)||(32605491-32605537)
chr8 (142-183)||(15602795-15602836)
chr8 (142-183)||(15611247-15611288)
chr8 (136-181)||(23834453-23834498)
chr8 (136-183)||(377572-377619)
chr8 (136-183)||(15532168-15532215)
chr8 (136-183)||(16231254-16231301)
chr8 (136-183)||(16861105-16861152)
chr8 (136-179)||(19278066-19278109)
chr8 (136-179)||(21972367-21972410)
chr8 (136-179)||(21976452-21976495)
chr8 (136-183)||(22028837-22028884)
chr8 (143-182)||(22045145-22045184)
chr8 (136-182)||(18619758-18619804)
chr8 (142-183)||(17926485-17926526)
[»] chr1 (32 HSPs)
chr1 (33-183)||(21714741-21714891)
chr1 (33-183)||(42864989-42865139)
chr1 (3-183)||(21787820-21787999)
chr1 (33-183)||(20091251-20091401)
chr1 (33-183)||(22831156-22831306)
chr1 (51-181)||(18181901-18182031)
chr1 (67-176)||(22468481-22468590)
chr1 (33-180)||(6152046-6152193)
chr1 (137-183)||(21615718-21615764)
chr1 (137-182)||(20138364-20138409)
chr1 (127-183)||(21022923-21022979)
chr1 (127-183)||(22449044-22449100)
chr1 (136-183)||(12647149-12647196)
chr1 (136-183)||(16080223-16080270)
chr1 (136-179)||(16375240-16375283)
chr1 (136-183)||(17678366-17678413)
chr1 (136-183)||(21305594-21305641)
chr1 (136-179)||(21407636-21407679)
chr1 (136-183)||(33797813-33797860)
chr1 (136-183)||(36819087-36819134)
chr1 (136-183)||(45489522-45489569)
chr1 (136-183)||(46975747-46975794)
chr1 (136-179)||(52639822-52639865)
chr1 (142-183)||(3472704-3472745)
chr1 (136-184)||(19212147-19212195)
chr1 (136-183)||(8761411-8761458)
chr1 (136-183)||(20228588-20228635)
chr1 (136-183)||(23819078-23819125)
chr1 (136-183)||(24782879-24782926)
chr1 (136-183)||(45310145-45310192)
chr1 (142-183)||(33049866-33049907)
chr1 (3-79)||(48603678-48603754)
[»] chr2 (34 HSPs)
chr2 (1-183)||(40621986-40622167)
chr2 (52-183)||(23038245-23038376)
chr2 (51-179)||(22740742-22740870)
chr2 (51-183)||(22758493-22758625)
chr2 (3-183)||(22798904-22799083)
chr2 (52-183)||(23019484-23019615)
chr2 (98-183)||(23101008-23101093)
chr2 (136-183)||(15477884-15477931)
chr2 (136-183)||(19928281-19928328)
chr2 (137-183)||(26125484-26125530)
chr2 (137-183)||(41667230-41667276)
chr2 (138-183)||(25963495-25963540)
chr2 (51-183)||(45677933-45678065)
chr2 (136-179)||(12901295-12901338)
chr2 (136-183)||(22460969-22461016)
chr2 (136-179)||(24649637-24649680)
chr2 (136-179)||(27379215-27379258)
chr2 (136-179)||(27383261-27383304)
chr2 (136-179)||(27602077-27602120)
chr2 (136-179)||(41530792-41530835)
chr2 (125-183)||(21918094-21918152)
chr2 (105-183)||(24673839-24673917)
chr2 (142-183)||(24175097-24175138)
chr2 (142-183)||(24655117-24655158)
chr2 (142-183)||(25961313-25961354)
chr2 (142-183)||(37524964-37525005)
chr2 (142-183)||(40428762-40428803)
chr2 (127-183)||(44370077-44370133)
chr2 (136-183)||(23187355-23187402)
chr2 (136-183)||(23598618-23598665)
chr2 (136-179)||(24628261-24628304)
chr2 (142-183)||(24735689-24735730)
chr2 (3-47)||(20309269-20309313)
chr2 (147-183)||(24716309-24716345)
[»] chr7 (41 HSPs)
chr7 (4-183)||(18154614-18154792)
chr7 (3-183)||(9703429-9703608)
chr7 (45-183)||(11880456-11880594)
chr7 (3-183)||(24054631-24054810)
chr7 (1-183)||(17137841-17138022)
chr7 (51-183)||(19649262-19649394)
chr7 (51-183)||(12321520-12321652)
chr7 (1-180)||(12187174-12187352)
chr7 (125-183)||(10508860-10508918)
chr7 (136-183)||(13149434-13149481)
chr7 (136-183)||(6801492-6801539)
chr7 (136-179)||(12718949-12718992)
chr7 (136-179)||(12723860-12723903)
chr7 (136-179)||(16906983-16907026)
chr7 (136-179)||(18279684-18279727)
chr7 (136-179)||(18283647-18283690)
chr7 (136-183)||(48593235-48593282)
chr7 (137-183)||(16275772-16275818)
chr7 (142-183)||(9445937-9445978)
chr7 (142-183)||(14430179-14430220)
chr7 (142-183)||(18557257-18557298)
chr7 (136-184)||(13462041-13462089)
chr7 (136-183)||(18837-18884)
chr7 (127-182)||(2760413-2760468)
chr7 (136-183)||(9593625-9593672)
chr7 (136-183)||(9644588-9644635)
chr7 (136-183)||(11312928-11312975)
chr7 (136-183)||(11987492-11987539)
chr7 (136-179)||(12715145-12715188)
chr7 (136-183)||(13635248-13635295)
chr7 (136-183)||(15580971-15581018)
chr7 (136-183)||(15728604-15728651)
chr7 (136-179)||(16114522-16114565)
chr7 (136-179)||(16117675-16117718)
chr7 (136-183)||(16438813-16438860)
chr7 (136-183)||(26292675-26292722)
chr7 (136-181)||(12318407-12318452)
chr7 (142-183)||(20569375-20569416)
chr7 (3-47)||(27847746-27847790)
chr7 (139-183)||(35151888-35151932)
chr7 (136-168)||(39722546-39722578)
[»] scaffold0101 (1 HSPs)
scaffold0101 (3-183)||(8735-8914)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-183)||(26983-27164)
[»] scaffold0131 (1 HSPs)
scaffold0131 (33-183)||(36649-36799)
[»] scaffold0004 (2 HSPs)
scaffold0004 (33-183)||(69987-70137)
scaffold0004 (136-183)||(10363-10410)
[»] chr5 (44 HSPs)
chr5 (33-183)||(26704257-26704407)
chr5 (33-183)||(26973990-26974140)
chr5 (33-183)||(37724095-37724245)
chr5 (33-183)||(23201559-23201710)
chr5 (3-183)||(21873411-21873590)
chr5 (1-180)||(22032476-22032654)
chr5 (33-183)||(23501123-23501273)
chr5 (34-183)||(14079340-14079489)
chr5 (53-183)||(23512318-23512448)
chr5 (136-183)||(123084-123131)
chr5 (136-183)||(21884968-21885015)
chr5 (136-183)||(26172744-26172791)
chr5 (136-183)||(26680870-26680917)
chr5 (136-183)||(26952477-26952524)
chr5 (127-183)||(23572364-23572420)
chr5 (136-183)||(12028344-12028391)
chr5 (136-183)||(16674432-16674479)
chr5 (136-183)||(17410727-17410774)
chr5 (136-183)||(17918930-17918977)
chr5 (136-183)||(18356607-18356654)
chr5 (1-180)||(18769785-18769963)
chr5 (136-179)||(19472502-19472545)
chr5 (136-183)||(20232830-20232877)
chr5 (136-179)||(20296128-20296171)
chr5 (136-183)||(20910579-20910626)
chr5 (136-183)||(21340546-21340593)
chr5 (136-183)||(23451637-23451684)
chr5 (136-183)||(23463142-23463189)
chr5 (136-183)||(23535368-23535415)
chr5 (136-183)||(26665910-26665957)
chr5 (136-183)||(26937507-26937554)
chr5 (136-182)||(42805700-42805746)
chr5 (142-183)||(21366444-21366485)
chr5 (142-183)||(24222174-24222215)
chr5 (142-183)||(31342403-31342444)
chr5 (136-183)||(1858755-1858802)
chr5 (136-183)||(23458881-23458928)
chr5 (136-183)||(25229185-25229232)
chr5 (136-183)||(25293341-25293388)
chr5 (136-178)||(22757416-22757458)
chr5 (142-183)||(17718218-17718259)
chr5 (142-183)||(18774490-18774531)
chr5 (142-183)||(20805847-20805888)
chr5 (142-183)||(21887124-21887165)
[»] scaffold0021 (1 HSPs)
scaffold0021 (34-183)||(174959-175108)
[»] scaffold0261 (1 HSPs)
scaffold0261 (51-182)||(1549-1680)
[»] scaffold0139 (1 HSPs)
scaffold0139 (51-182)||(20192-20323)
[»] scaffold0102 (1 HSPs)
scaffold0102 (33-183)||(48238-48388)
[»] chr6 (44 HSPs)
chr6 (33-183)||(19863171-19863321)
chr6 (33-183)||(19873313-19873463)
chr6 (51-179)||(25641965-25642093)
chr6 (51-183)||(22432461-22432593)
chr6 (3-183)||(22438964-22439143)
chr6 (51-183)||(22334669-22334801)
chr6 (67-183)||(15041328-15041444)
chr6 (99-183)||(16924657-16924741)
chr6 (33-183)||(21739800-21739950)
chr6 (33-183)||(18907299-18907449)
chr6 (136-183)||(12496588-12496635)
chr6 (137-183)||(21702568-21702614)
chr6 (51-183)||(15894207-15894339)
chr6 (99-183)||(16965088-16965172)
chr6 (136-184)||(27553385-27553433)
chr6 (87-183)||(31164625-31164721)
chr6 (136-179)||(8244141-8244184)
chr6 (136-179)||(11567143-11567186)
chr6 (136-183)||(12706968-12707015)
chr6 (136-183)||(16741486-16741533)
chr6 (136-183)||(17804477-17804524)
chr6 (136-179)||(19870871-19870914)
chr6 (136-183)||(22429809-22429856)
chr6 (136-179)||(22863226-22863269)
chr6 (136-179)||(23395349-23395392)
chr6 (136-183)||(23657199-23657246)
chr6 (136-183)||(25135451-25135498)
chr6 (136-183)||(27415721-27415768)
chr6 (136-183)||(27567388-27567435)
chr6 (142-183)||(16523181-16523222)
chr6 (142-183)||(22592583-22592624)
chr6 (136-177)||(23990201-23990242)
chr6 (136-176)||(12618630-12618670)
chr6 (127-183)||(22059521-22059577)
chr6 (136-183)||(1587510-1587557)
chr6 (136-183)||(1644985-1645032)
chr6 (136-183)||(5616593-5616640)
chr6 (136-183)||(9482072-9482119)
chr6 (136-183)||(14472550-14472597)
chr6 (136-183)||(20907760-20907807)
chr6 (125-184)||(21834667-21834726)
chr6 (142-183)||(18180789-18180830)
chr6 (142-183)||(19790558-19790599)
chr6 (3-47)||(22831666-22831710)
[»] scaffold0174 (1 HSPs)
scaffold0174 (51-183)||(18231-18363)
[»] scaffold0043 (2 HSPs)
scaffold0043 (3-183)||(18402-18581)
scaffold0043 (136-183)||(76950-76997)
[»] scaffold0031 (2 HSPs)
scaffold0031 (51-183)||(65571-65703)
scaffold0031 (136-183)||(53845-53892)
[»] chr4 (36 HSPs)
chr4 (3-183)||(13569674-13569853)
chr4 (3-183)||(23843640-23843819)
chr4 (51-183)||(15093982-15094114)
chr4 (3-183)||(44675794-44675973)
chr4 (33-183)||(12570212-12570362)
chr4 (1-183)||(15121581-15121762)
chr4 (87-183)||(15124932-15125028)
chr4 (136-183)||(2015058-2015105)
chr4 (136-183)||(9556810-9556857)
chr4 (134-183)||(19757380-19757429)
chr4 (134-183)||(19782377-19782426)
chr4 (136-179)||(4561116-4561159)
chr4 (136-179)||(5756720-5756763)
chr4 (136-183)||(11250340-11250387)
chr4 (136-183)||(15353085-15353132)
chr4 (140-183)||(16243179-16243222)
chr4 (136-183)||(18222157-18222204)
chr4 (136-183)||(26243444-26243491)
chr4 (136-183)||(27534305-27534352)
chr4 (136-179)||(33742658-33742701)
chr4 (136-183)||(36133741-36133788)
chr4 (125-183)||(16487856-16487914)
chr4 (137-183)||(42997229-42997275)
chr4 (142-183)||(16351627-16351668)
chr4 (142-183)||(16356731-16356772)
chr4 (142-183)||(43255940-43255981)
chr4 (142-183)||(45938433-45938474)
chr4 (135-183)||(16678368-16678416)
chr4 (136-183)||(1951540-1951587)
chr4 (136-183)||(17152266-17152313)
chr4 (136-183)||(18237172-18237219)
chr4 (136-183)||(23139550-23139597)
chr4 (136-183)||(28569223-28569270)
chr4 (137-183)||(14708413-14708459)
chr4 (142-183)||(3413082-3413123)
chr4 (142-183)||(25555802-25555843)
[»] scaffold0081 (3 HSPs)
scaffold0081 (2-183)||(14833-15013)
scaffold0081 (2-183)||(23848-24028)
scaffold0081 (2-183)||(39272-39452)
[»] chr3 (49 HSPs)
chr3 (62-183)||(15877606-15877727)
chr3 (3-183)||(23077256-23077435)
chr3 (3-162)||(17524951-17525109)
chr3 (33-183)||(23408623-23408773)
chr3 (34-180)||(856327-856473)
chr3 (2-183)||(14878283-14878464)
chr3 (125-183)||(19725690-19725748)
chr3 (125-183)||(23052855-23052913)
chr3 (127-183)||(16369692-16369748)
chr3 (127-183)||(16910034-16910090)
chr3 (127-183)||(26190787-26190843)
chr3 (136-183)||(326943-326990)
chr3 (136-183)||(1598259-1598306)
chr3 (136-183)||(3833954-3834001)
chr3 (136-179)||(7109982-7110025)
chr3 (136-179)||(7113917-7113960)
chr3 (136-183)||(11300290-11300337)
chr3 (136-183)||(11594918-11594965)
chr3 (104-183)||(15060553-15060632)
chr3 (136-183)||(15482942-15482989)
chr3 (136-183)||(15849864-15849911)
chr3 (136-183)||(15941683-15941730)
chr3 (136-183)||(16690499-16690546)
chr3 (136-183)||(16697072-16697119)
chr3 (136-183)||(16797833-16797880)
chr3 (136-183)||(16808660-16808707)
chr3 (136-183)||(17242252-17242299)
chr3 (136-183)||(20461279-20461326)
chr3 (136-179)||(22337003-22337046)
chr3 (136-179)||(27409426-27409469)
chr3 (136-183)||(38814664-38814711)
chr3 (136-183)||(42326224-42326271)
chr3 (142-184)||(322888-322930)
chr3 (133-183)||(1982589-1982639)
chr3 (125-183)||(12173068-12173126)
chr3 (142-183)||(3402734-3402775)
chr3 (138-183)||(11298307-11298352)
chr3 (142-183)||(12496554-12496595)
chr3 (127-183)||(12037731-12037787)
chr3 (136-183)||(7793125-7793172)
chr3 (136-179)||(15617657-15617700)
chr3 (136-179)||(22321948-22321991)
chr3 (125-183)||(11863073-11863131)
chr3 (142-183)||(11557163-11557204)
chr3 (34-183)||(15051707-15051856)
chr3 (142-183)||(18383695-18383736)
chr3 (142-182)||(2897603-2897643)
chr3 (3-79)||(14179596-14179672)
chr3 (143-183)||(20723288-20723328)
[»] scaffold0096 (1 HSPs)
scaffold0096 (3-183)||(16127-16306)
[»] scaffold0671 (1 HSPs)
scaffold0671 (2-183)||(6264-6444)
[»] scaffold0324 (1 HSPs)
scaffold0324 (87-183)||(15646-15742)
[»] scaffold0297 (1 HSPs)
scaffold0297 (3-183)||(15447-15626)
[»] scaffold0555 (1 HSPs)
scaffold0555 (33-183)||(773-923)
[»] scaffold0042 (3 HSPs)
scaffold0042 (33-183)||(34688-34838)
scaffold0042 (136-183)||(64133-64180)
scaffold0042 (136-183)||(76017-76064)
[»] scaffold1895 (1 HSPs)
scaffold1895 (51-154)||(1034-1137)
[»] scaffold0761 (1 HSPs)
scaffold0761 (105-183)||(6087-6165)
[»] scaffold0149 (2 HSPs)
scaffold0149 (3-183)||(3904-4082)
scaffold0149 (3-183)||(8335-8513)
[»] scaffold0412 (1 HSPs)
scaffold0412 (105-183)||(6194-6272)
[»] scaffold0311 (1 HSPs)
scaffold0311 (33-183)||(6856-7006)
[»] scaffold0210 (2 HSPs)
scaffold0210 (33-183)||(21584-21734)
scaffold0210 (33-183)||(29476-29626)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-183)||(12918-13099)
scaffold0029 (136-179)||(61395-61438)
scaffold0029 (138-179)||(65311-65352)
[»] scaffold0111 (2 HSPs)
scaffold0111 (87-176)||(32679-32768)
scaffold0111 (136-183)||(8779-8826)
[»] scaffold0676 (1 HSPs)
scaffold0676 (127-183)||(4712-4768)
[»] scaffold0585 (1 HSPs)
scaffold0585 (136-184)||(9614-9662)
[»] scaffold0080 (1 HSPs)
scaffold0080 (127-183)||(18434-18490)
[»] scaffold0056 (1 HSPs)
scaffold0056 (127-183)||(13855-13911)
[»] scaffold0035 (1 HSPs)
scaffold0035 (33-168)||(46520-46655)
[»] scaffold0013 (1 HSPs)
scaffold0013 (136-183)||(2452-2499)
[»] scaffold0012 (1 HSPs)
scaffold0012 (136-183)||(24747-24794)
[»] scaffold0008 (2 HSPs)
scaffold0008 (137-183)||(2157-2203)
scaffold0008 (136-183)||(30523-30570)
[»] scaffold1124 (1 HSPs)
scaffold1124 (32-180)||(2066-2214)
[»] scaffold0615 (1 HSPs)
scaffold0615 (127-183)||(1862-1918)
[»] scaffold0546 (2 HSPs)
scaffold0546 (136-184)||(2179-2227)
scaffold0546 (136-180)||(6039-6083)
[»] scaffold0371 (1 HSPs)
scaffold0371 (137-181)||(15618-15662)
[»] scaffold0109 (3 HSPs)
scaffold0109 (136-184)||(11080-11128)
scaffold0109 (136-183)||(45398-45445)
scaffold0109 (136-180)||(7224-7268)
[»] scaffold0107 (1 HSPs)
scaffold0107 (136-184)||(15196-15244)
[»] scaffold0023 (2 HSPs)
scaffold0023 (127-183)||(23445-23501)
scaffold0023 (3-154)||(38286-38436)
[»] scaffold1461 (1 HSPs)
scaffold1461 (136-183)||(209-256)
[»] scaffold1220 (1 HSPs)
scaffold1220 (136-183)||(2082-2129)
[»] scaffold0483 (1 HSPs)
scaffold0483 (136-183)||(611-658)
[»] scaffold0372 (1 HSPs)
scaffold0372 (136-179)||(4884-4927)
[»] scaffold0284 (1 HSPs)
scaffold0284 (136-179)||(18634-18677)
[»] scaffold0228 (1 HSPs)
scaffold0228 (136-183)||(18411-18458)
[»] scaffold0184 (1 HSPs)
scaffold0184 (136-183)||(4003-4050)
[»] scaffold0168 (1 HSPs)
scaffold0168 (136-183)||(3309-3356)
[»] scaffold0120 (1 HSPs)
scaffold0120 (136-183)||(19796-19843)
[»] scaffold0070 (1 HSPs)
scaffold0070 (136-183)||(10183-10230)
[»] scaffold0044 (3 HSPs)
scaffold0044 (136-183)||(19468-19515)
scaffold0044 (137-183)||(62541-62587)
scaffold0044 (142-183)||(13190-13231)
[»] scaffold0036 (1 HSPs)
scaffold0036 (136-183)||(66194-66241)
[»] scaffold0017 (3 HSPs)
scaffold0017 (136-183)||(56377-56424)
scaffold0017 (142-183)||(191059-191100)
scaffold0017 (143-183)||(192762-192802)
[»] scaffold0009 (1 HSPs)
scaffold0009 (136-183)||(228152-228199)
[»] scaffold0003 (4 HSPs)
scaffold0003 (136-183)||(71593-71640)
scaffold0003 (136-183)||(96886-96933)
scaffold0003 (142-183)||(413829-413870)
scaffold0003 (136-183)||(139990-140037)
[»] scaffold0034 (1 HSPs)
scaffold0034 (137-183)||(16442-16488)
[»] scaffold0439 (2 HSPs)
scaffold0439 (142-183)||(2214-2255)
scaffold0439 (142-183)||(10074-10115)
[»] scaffold0393 (1 HSPs)
scaffold0393 (142-183)||(1790-1831)
[»] scaffold0327 (1 HSPs)
scaffold0327 (142-183)||(576-617)
[»] scaffold0158 (2 HSPs)
scaffold0158 (142-183)||(3139-3180)
scaffold0158 (142-183)||(6805-6846)
[»] scaffold1326 (1 HSPs)
scaffold1326 (127-183)||(1268-1324)
[»] scaffold0220 (1 HSPs)
scaffold0220 (2-182)||(4712-4891)
[»] scaffold0410 (1 HSPs)
scaffold0410 (136-183)||(11660-11707)
[»] scaffold0346 (1 HSPs)
scaffold0346 (136-183)||(15377-15424)
[»] scaffold0342 (1 HSPs)
scaffold0342 (136-183)||(7049-7096)
[»] scaffold0280 (1 HSPs)
scaffold0280 (136-183)||(19070-19117)
[»] scaffold0177 (1 HSPs)
scaffold0177 (136-183)||(13266-13313)
[»] scaffold0171 (1 HSPs)
scaffold0171 (136-183)||(35289-35336)
[»] scaffold0132 (1 HSPs)
scaffold0132 (136-183)||(36585-36632)
[»] scaffold0130 (1 HSPs)
scaffold0130 (136-183)||(5779-5826)
[»] scaffold0037 (1 HSPs)
scaffold0037 (125-180)||(21350-21405)
[»] scaffold0028 (1 HSPs)
scaffold0028 (136-179)||(58501-58544)
[»] scaffold0010 (1 HSPs)
scaffold0010 (136-183)||(23496-23543)
[»] scaffold0001 (1 HSPs)
scaffold0001 (136-183)||(173570-173617)
[»] scaffold1296 (1 HSPs)
scaffold1296 (125-183)||(673-731)
[»] scaffold0476 (2 HSPs)
scaffold0476 (145-183)||(5885-5923)
scaffold0476 (145-183)||(7080-7118)
[»] scaffold0193 (1 HSPs)
scaffold0193 (137-183)||(9701-9747)
[»] scaffold1552 (1 HSPs)
scaffold1552 (142-183)||(639-680)
[»] scaffold0216 (1 HSPs)
scaffold0216 (142-183)||(16899-16940)
[»] scaffold0198 (2 HSPs)
scaffold0198 (3-84)||(24006-24086)
scaffold0198 (147-183)||(26706-26742)
[»] scaffold0114 (1 HSPs)
scaffold0114 (127-180)||(7575-7628)
[»] scaffold0104 (2 HSPs)
scaffold0104 (130-183)||(2114-2167)
scaffold0104 (130-183)||(9796-9849)
[»] scaffold0351 (1 HSPs)
scaffold0351 (3-47)||(16443-16487)
[»] scaffold0015 (1 HSPs)
scaffold0015 (136-180)||(192098-192142)


Alignment Details
Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 21389407 - 21389237
Alignment:
Q  6 tcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaaca 105  Q
    |||||||||||| |||||| |||||||||||| ||||||||||| |||||||| |||||  ||||||||||||| ||||  |||||||| || |||| ||    
T  21389407 tcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcatatattggtctcattactacccaagggtccatctctaatcaaatca 21389308  T
Q  106 tgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctc 176  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||| |||||||| |||||||    
T  21389307 tgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaagcgagagcatctgctc 21389237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 21395937 - 21395768
Alignment:
Q  6 tcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaaca 105  Q
    |||||||||| | |||||| |||||||||||| |||| |||||| ||||||||||||||| ||||||||||||| ||||  |||||||| || |||| ||    
T  21395937 tcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatca 21395838  T
Q  106 tgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 175  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||    
T  21395837 tgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgct 21395768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 21790430 - 21790261
Alignment:
Q  6 tcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaaca 105  Q
    |||||||||| | |||||| |||||||||||| |||| |||||| ||||||||||||||| ||||||||||||| ||||  |||||||| || |||| ||    
T  21790430 tcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatca 21790331  T
Q  106 tgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 175  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||    
T  21790330 tgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgct 21790261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 17353894 - 17353715
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| |||||| ||||||||||||||| ||||||||||||| ||||  |||||||| || | ||    
T  17353894 acatcatattcaacataaacatttcataa-cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaa 17353796  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      ||||||||||||||||| | |||||||||| ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  17353795 ttatgcgacacaaatcgcaatatcctcacttgcactcagttctgcaagtgctcgcgaggcgagagcatctgctcgccatgg 17353715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 19899257 - 19899436
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||| ||| ||| ||||||||| ||||  |||||||| || ||||    
T  19899257 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaa 19899355  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19899356 ttatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19899436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 16184890 - 16185069
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||| ||||||||||| ||||| || ||| ||||| |||| ||| || ||||| ||||||||| ||| ||||||||| || |  |||||||| || ||||    
T  16184890 acattataatcaacattaacatctcatat-cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaa 16184988  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      ||||||||||  |||||   |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16184989 ttatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16185069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 19976654 - 19976784
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||| ||| ||| |||||||||  | |  |||||||| || ||||  |||||||||| ||||||   |||||||||| ||||| |||||||||    
T  19976654 ttaacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaag 19976753  T
Q  151 tgctggcgaggcgagagcgtctgctcgccat 181  Q
    |||| ||||||||||||| ||||||||||||    
T  19976754 tgctcgcgaggcgagagcatctgctcgccat 19976784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 24755912 - 24756062
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| || |||||| ||| ||||||||| ||||  |||||||| ||||||   ||||||||||  |||||   | ||||||    
T  24755912 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 24756011  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  24756012 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24756062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 19983255 - 19983434
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||| ||| ||| ||||||||| || |  |||||||| || ||||    
T  19983255 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaa 19983353  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| ||||||   |||||| ||| ||||| || |||||||||| ||||||||||||| ||||||| ||||||    
T  19983354 ttatgcgacacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcaccatgg 19983434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 178
Target Start/End: Complemental strand, 23776792 - 23776617
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||||||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| |||||||||  |||  |||||||| || ||||    
T  23776792 acatcatattcaacatcaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattactacctaagtgtccatctctaaccaaa 23776694  T
Q  103 acatgcgacacaaat-cgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgc 178  Q
      |||||||||| || |||| | ||||  |||| ||||| ||||| ||||||| ||||||||||||| |||||||||    
T  23776693 ttatgcgacacagattcgcaatatcctagcttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgc 23776617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 21162015 - 21161838
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| ||   |||||||| |||   |||||||| || ||||    
T  21162015 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaa 21161917  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 181  Q
      || ||||||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  21161916 ctatacgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 21161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 21168679 - 21168499
Alignment:
Q  2 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaa 101  Q
    ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| ||   |||||||| |||   |||||||| || |||    
T  21168679 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaa 21168581  T
Q  102 aacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  |||||||||| ||||||   |||||||||| |||||  || ||||||||| ||||||||||||| ||||||||||||||    
T  21168580 actatgcgacacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatctgctcgccatgg 21168499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 22113554 - 22113507
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22113554 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22113507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 22135057 - 22135010
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22135057 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22135010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 22166207 - 22166160
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22166207 actcaattctggaagtgcttgcgaggcgagagcatctgctcgccatgg 22166160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 23846841 - 23846794
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  23846841 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23846794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 17055214 - 17055168
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17055168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 19259432 - 19259379
Alignment:
Q  130 acttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19259432 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19259379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 20465873 - 20465817
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  20465873 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatgg 20465817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 22010513 - 22010457
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22010513 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22010457  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 15538728 - 15538775
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15538728 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15538775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 17828409 - 17828362
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17828409 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17828362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20856250 - 20856203
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20856250 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 24434063 - 24434016
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  24434063 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24434016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 39094767 - 39094720
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  39094767 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 39094720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 43252093 - 43252136
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  43252093 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 43252136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 30643127 - 30643069
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||| | ||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  30643127 tcctaacttgcattcaattctggaagtgctcgcgaggcaagagcatctgctcgccatgg 30643069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 32598959 - 32599005
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatgg 32599005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 32605491 - 32605537
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatgg 32605537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 15602836 - 15602795
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  15602836 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15602795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 15611288 - 15611247
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  15611288 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15611247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 23834453 - 23834498
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 181  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  23834453 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 23834498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 377572 - 377619
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||| ||||||| ||||||||||||||    
T  377572 actcagttctggaagtgctcgcgagacgagagcatctgctcgccatgg 377619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 15532168 - 15532215
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| |||||||| |||||    
T  15532168 actcagttctggaagtgctcgcgaggcgagagcatctgctcggcatgg 15532215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 16231301 - 16231254
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  16231301 actcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgg 16231254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 16861152 - 16861105
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  16861152 actcagttctggaagtgctcgcgaggcgagagcatctactcgccatgg 16861105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 19278109 - 19278066
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  19278109 actcaattctgaaagtgctcgcgaggcgagagcatctgctcgcc 19278066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 21972410 - 21972367
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||    
T  21972410 actcaattctggaagtgctcgcggggcgagagcatctgctcgcc 21972367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 21976495 - 21976452
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||    
T  21976495 actcaattctggaagtgctcgcggggcgagagcatctgctcgcc 21976452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 22028837 - 22028884
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  22028837 actcagttctggaagtgctcgcgaggcgagagcatctgcttgccatgg 22028884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 22045145 - 22045184
Alignment:
Q  143 tctggaagtgctggcgaggcgagagcgtctgctcgccatg 182  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  22045145 tctggaagtgctcgcgaggcgagagcatctgctcgccatg 22045184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 18619758 - 18619804
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 182  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||||    
T  18619758 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatg 18619804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 17926526 - 17926485
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||| |||||| ||||||||||||| ||||||||||||||    
T  17926526 ttctgggagtgctcgcgaggcgagagcatctgctcgccatgg 17926485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 7e-42; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 21714741 - 21714891
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || |||| ||||||||||| |||||||||||||||||    
T  21714741 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcact 21714840  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21714841 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21714891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 42865139 - 42864989
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| ||||||||| ||| ||||||||| ||||  |||||||| || ||||  |||||||||| ||||||   ||||||||    
T  42865139 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 42865040  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  42865039 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 42864989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 21787999 - 21787820
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||||||||||||||||| || ||  ||||| || | ||| || ||||||||||||||| ||  ||||||||| ||||  |||||||| ||||||     
T  21787999 acatcataatcaacatcaacatttcataa-cagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctctaaacaag 21787901  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      ||||||||||  |||||  || |||||||| ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  21787900 ttatgcgacacaggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatgg 21787820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 20091401 - 20091251
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||| ||| ||||||||||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||| |    
T  20091401 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatt 20091302  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| |||||| |||| | ||||||||||||||    
T  20091301 tgcactcagttctggaagtgctcgcgaggtgagaacatctgctcgccatgg 20091251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 22831306 - 22831156
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| || |||||| ||| |||||||||  |||| |||||| | ||||||  ||||||||||| ||||||   | |||| |    
T  22831306 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaat 22831207  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||| ||||||||| ||||||||||||| ||||||||||||||    
T  22831206 tgcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatgg 22831156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 18182031 - 18181901
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||| | ||| |||||||||  |||| |||||| | || |||   |||||||||| ||||||   |||| ||||| ||||| |||||||||    
T  18182031 ttaacttcttatacaagtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaag 18181932  T
Q  151 tgctggcgaggcgagagcgtctgctcgccat 181  Q
    |||| || |||||||||| ||||||||||||    
T  18181931 tgctcgcaaggcgagagcatctgctcgccat 18181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 22468590 - 22468481
Alignment:
Q  67 gtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgaga 166  Q
    |||||| |||||| ||||  |||||||| || | ||  |||||||||| |||||| |  ||||||||| ||||| ||||||||||||| |||||||||||    
T  22468590 gtctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcgaga 22468491  T
Q  167 gcgtctgctc 176  Q
    || |||||||    
T  22468490 gcatctgctc 22468481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 6152046 - 6152193
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| || |||||| ||| |||||||||  |||| |||||| | || |||  ||||||||||| ||||||   |||| ||     
T  6152046 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaaca 6152145  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    || | ||| ||||||||||||| ||||||||||||| |||||||||||    
T  6152146 tgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgcca 6152193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 21615718 - 21615764
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21615764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 20138364 - 20138409
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 182  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatg 20138409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 21022923 - 21022979
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||| ||||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  21022923 ctcactagtactgagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21022979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 22449100 - 22449044
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22449100 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22449044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 12647149 - 12647196
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12647149 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12647196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 16080270 - 16080223
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16080270 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16080223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 16375283 - 16375240
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  16375283 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 16375240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 17678413 - 17678366
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17678413 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17678366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 21305594 - 21305641
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21305594 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21305641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 21407636 - 21407679
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  21407636 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 21407679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 33797813 - 33797860
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  33797813 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 33797860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 36819134 - 36819087
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  36819134 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 36819087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 45489569 - 45489522
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  45489569 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 45489522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 46975747 - 46975794
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  46975747 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 46975794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 52639822 - 52639865
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  52639822 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 52639865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 3472745 - 3472704
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  3472745 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3472704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 19212147 - 19212195
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    ||||| || |||||||||| ||||||||||||| |||||||||||||||    
T  19212147 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggt 19212195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 8761458 - 8761411
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||| | ||||||||||||| ||||||||||||||    
T  8761458 actcagttctggaagtgttcgcgaggcgagagcatctgctcgccatgg 8761411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20228635 - 20228588
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  20228635 actcaattctggatgtgctcgcgaggcgagagcatttgctcgccatgg 20228588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 23819125 - 23819078
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23819125 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 23819078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 24782926 - 24782879
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  24782926 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 24782879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 45310192 - 45310145
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  45310192 actcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatgg 45310145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 33049907 - 33049866
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| |||||| |||||||    
T  33049907 ttctggaagtgctcgcgaggcgagagcatctgcttgccatgg 33049866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 48603678 - 48603754
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactac 79  Q
    ||||||||||||||| |||||  |||||  ||||| |||| |||| | ||||||||||||||| ||| || ||||||    
T  48603678 acatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatactac 48603754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 40622167 - 40621986
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    |||||||||||||||||  ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| |||||    
T  40622167 atacatcataatcaacacaaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaaca 40622069  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||| |||||| ||| |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  40622068 aaatatgcgaaacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 40621986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 23038245 - 23038376
Alignment:
Q  52 taacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagt 151  Q
    |||||||||||||| |||||| |||||| ||||  |||||||| || |||| ||||||||||| |||||| |||||||||||| ||||| ||||||||||    
T  23038245 taacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcacttgcactcagttctggaagt 23038344  T
Q  152 gctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||  |||||||||||| ||||||||||||||    
T  23038345 gctcacgaggcgagagcatctgctcgccatgg 23038376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 22740870 - 22740742
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| |||||||||    
T  22740870 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 22740771  T
Q  151 tgctggcgaggcgagagcgtctgctcgcc 179  Q
    |||| ||||||||||||| ||||||||||    
T  22740770 tgctcgcgaggcgagagcatctgctcgcc 22740742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 22758625 - 22758493
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    |||| |||||||||| ||||||||||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| ||||| |||    
T  22758625 ttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaag 22758526  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||  |||||||||||| ||||||||||||||    
T  22758525 tgctcacgaggcgagagcatctgctcgccatgg 22758493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 22799083 - 22798904
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||| || |  |||||||| || ||||    
T  22799083 acatcatattcaacattaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccatctctaatcaaa 22798985  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| |||||| | |||| ||||| ||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  22798984 ttatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22798904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 52 - 183
Target Start/End: Complemental strand, 23019615 - 23019484
Alignment:
Q  52 taacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagt 151  Q
    |||||||||||||| ||| ||||||||| ||||  |||| ||| ||  |||  |||||||||| |||||| | |||| ||||| ||||| ||||||||||    
T  23019615 taacttcttatataggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgacttgcactcagttctggaagt 23019516  T
Q  152 gctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||| ||||||||||||| ||| ||||||||||    
T  23019515 gctcgcgaggcgagagcatctactcgccatgg 23019484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 23101093 - 23101008
Alignment:
Q  98 acaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||| | |||||||| |||||||||| ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  23101093 acaaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatgg 23101008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 15477884 - 15477931
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  15477884 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15477931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 19928328 - 19928281
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  19928328 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19928281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 26125484 - 26125530
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatgg 26125530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 41667230 - 41667276
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatgg 41667276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 25963540 - 25963495
Alignment:
Q  138 tcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25963540 tcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 25963495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 45678065 - 45677933
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||| || |||||| ||| |||||||||  |||| |||||| | || |||  ||||||||||| ||| ||   | |||| ||| ||||| |||||||||    
T  45678065 ttaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcactcagttctggaag 45677966  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||  |||||||||||| ||||||||||||||    
T  45677965 tgctcacgaggcgagagcatctgctcgccatgg 45677933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 12901338 - 12901295
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12901338 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 12901295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 22461016 - 22460969
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22461016 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22460969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 24649637 - 24649680
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  24649637 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 24649680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 27379258 - 27379215
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27379258 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27379215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 27383304 - 27383261
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27383304 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27383261  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 27602077 - 27602120
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27602077 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27602120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 41530835 - 41530792
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  41530835 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 41530792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 21918152 - 21918094
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21918152 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21918094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 24673839 - 24673917
Alignment:
Q  105 atgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||| ||||||   |||| ||||| | ||| || |||||||||| ||||||||||||| ||||||||||||||    
T  24673839 atgcgacacagatcgcaacatcctaacttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatgg 24673917  T

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Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 24175097 - 24175138
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  24175097 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24175138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 24655158 - 24655117
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  24655158 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24655117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 25961354 - 25961313
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  25961354 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 25961313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 37524964 - 37525005
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  37524964 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 37525005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 40428762 - 40428803
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  40428762 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 40428803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 44370133 - 44370077
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  44370133 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatgg 44370077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23187355 - 23187402
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23187355 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 23187402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23598618 - 23598665
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23598618 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 23598665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 24628304 - 24628261
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  24628304 actcaattctgaaagtgctcgcgaggcgagagcatctgctcgcc 24628261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 24735689 - 24735730
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||    
T  24735689 ttctggaagtgctcgcgaggcgagagcatctgctcaccatgg 24735730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 20309269 - 20309313
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatatta 47  Q
    ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  20309269 acatcataatcaacaacaacatatcttattcagcttcacagatta 20309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 24716345 - 24716309
Alignment:
Q  147 gaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  24716345 gaagtgctcgcgaggcgagagcatctgctcgccatgg 24716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 18154792 - 18154614
Alignment:
Q  4 catcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaa 103  Q
    ||||||| ||||||| ||||| || ||  ||||| |||||||| || ||||||||||||||| ||||||||||||| |||   |||||||  || ||||     
T  18154792 catcatattcaacattaacatctcataa-cagcttcacatattgcagttaacttcttatataggtctcattactacccaatggtccatctttaatcaaat 18154694  T
Q  104 catgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||| ||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  18154693 catgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18154614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 9703429 - 9703608
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||||||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||| ||| ||||  |||||||| || ||||    
T  9703429 acatcataatcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaa 9703527  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||  |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  9703528 ttatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 9703608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 11880456 - 11880594
Alignment:
Q  45 ttacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattc 144  Q
    ||||| ||||| ||||||||| ||| ||||||||| ||||  |||||||| || ||||  |||||||||| ||||||   |||||||||| ||||| |||    
T  11880456 ttacagttaacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttc 11880555  T
Q  145 tggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||  |||||||||||| ||||||||||||||    
T  11880556 tggaagtgctcacgaggcgagagcatctgctcgccatgg 11880594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 24054631 - 24054810
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||||||||||  ||||| || ||  ||||| |||| ||| || |||||| |||||||| ||||||||||||| ||||  |||||||| || | ||    
T  24054631 acatcataatcaacactaacatctcataa-cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtccatctctaatcgaa 24054729  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| |||||| | | |||||||  ||||| ||||||||||||| || || ||||||| ||||||||||||||    
T  24054730 ttatgcgacacagatcgcaatattctcactttcactcagttctggaagtgctcgcaagacgagagcatctgctcgccatgg 24054810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 17138022 - 17137841
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    |||||||||| ||||||  ||||| || ||| ||||| |||| ||| || ||||||||||||||| |||||||||||||  |||  |||||| | || ||    
T  17138022 atacatcatattcaacacaaacatctcatat-cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatca 17137924  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  || || ||||| ||| ||   | |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17137923 attcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17137841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 19649394 - 19649262
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||| || || |||||| |||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||  ||||  |||||||||    
T  19649394 ttaacttctaatttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaag 19649295  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||| ||||||| ||||||||||||||    
T  19649294 tgctcgcgagacgagagcatctgctcgccatgg 19649262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 12321652 - 12321520
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||| ||||||||| ||| |||||||||  |||| |||||| | || |||  ||||||||||| |||||    | |||| ||| ||||| |||||||||    
T  12321652 ttaacatcttatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgcactcagttctggaag 12321553  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||||| ||||||||||||||    
T  12321552 tgctcgcgaggcgagagcatctgctcgccatgg 12321520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 12187174 - 12187352
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    |||||||||| |||||   ||||| |||||| ||||| |||| ||| || ||||||||||||||| |||||||||||||  ||   |||||||| || ||    
T  12187174 atacatcatattcaactcaaacatctcttat-cagcttcacagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatca 12187272  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    |  || || ||| | ||| |  | | |||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  12187273 attcaagcaacatatatcactatattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgcca 12187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 10508918 - 10508860
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  10508918 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 10508860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 13149434 - 13149481
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  13149434 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13149481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 6801492 - 6801539
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  6801492 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6801539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 12718949 - 12718992
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12718949 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 12718992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 12723860 - 12723903
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12723860 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 12723903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 16907026 - 16906983
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  16907026 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 16906983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 18279684 - 18279727
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  18279684 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 18279727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 18283647 - 18283690
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  18283647 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 18283690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 48593282 - 48593235
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  48593282 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 48593235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 16275772 - 16275818
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatgg 16275818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 9445978 - 9445937
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  9445978 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 9445937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 14430179 - 14430220
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  14430179 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 14430220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 18557257 - 18557298
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  18557257 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18557298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 13462041 - 13462089
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  13462041 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggt 13462089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 18884 - 18837
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  18884 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 18837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 2760413 - 2760468
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 182  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||| |||||||||    
T  2760413 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatg 2760468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 9593625 - 9593672
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||| ||||    
T  9593625 actcagttctggaagtgctcgcgaggcgagagcatctgctcgctatgg 9593672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 9644588 - 9644635
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||| ||||    
T  9644588 actcagttctggaagtgctcgcgaggcgagagcatctgctcgctatgg 9644635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 11312928 - 11312975
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||||||    
T  11312928 actcagttctggaagtgctcccgaggcgagagcatctgctcgccatgg 11312975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 11987492 - 11987539
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  11987492 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatgg 11987539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 12715145 - 12715188
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  12715145 actcaattctggaagtgctcgcgaggcaagagcatctgctcgcc 12715188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 13635295 - 13635248
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| |||| |||||||||    
T  13635295 actcagttctggaagtgctcgcgaggcgagagcatctgttcgccatgg 13635248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 15580971 - 15581018
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  15580971 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatgg 15581018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 15728604 - 15728651
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  15728604 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 15728651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 16114522 - 16114565
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||    
T  16114522 actcaattctggaagtgctcgcgaggcgagagcatttgctcgcc 16114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 16117675 - 16117718
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||    
T  16117675 actcaattctggaagtgctcgcgaggcgagagcatttgctcgcc 16117718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 16438860 - 16438813
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||| ||||||||| ||||||||||||| ||||||||||||||    
T  16438860 actcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatgg 16438813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 26292675 - 26292722
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  26292675 actcaattctggatgtgctcgcgaggcgagagcatttgctcgccatgg 26292722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 12318407 - 12318452
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 181  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||    
T  12318407 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccat 12318452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 20569416 - 20569375
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  20569416 ttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 20569375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 27847790 - 27847746
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatatta 47  Q
    ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  27847790 acatcataatcaacaacaacatatcttattcagcttcacagatta 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 35151888 - 35151932
Alignment:
Q  139 caattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||||    
T  35151888 caattttggaagtgctcgcgaggcgagagcatctgctcaccatgg 35151932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 39722546 - 39722578
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagc 168  Q
    ||||||||||||||||||| |||||||||||||    
T  39722546 actcaattctggaagtgctcgcgaggcgagagc 39722578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 8914 - 8735
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||||||||| || ||  ||||| |||| |||||| ||||||||||||||| ||||||||||||| ||||  |||||||| || | ||    
T  8914 acatcatattcaacatcaacatttcataa-cagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaa 8816  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      ||||||||||  ||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  8815 ttatgcgacacaggtcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 26983 - 27164
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    |||||||||||||||||  ||||| || ||  ||||| |||| ||| || ||||||||||||||||||||||||||||| ||||  |||||||| |||||    
T  26983 atacatcataatcaacacaaacatctcataa-cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaaca 27081  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||| || ||| ||| |||||| | |||||||||| ||||| |||||||| |||| ||||||| ||||| ||||||||||||||    
T  27082 aaatattcgaaacagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaagagcatctgctcgccatgg 27164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 36649 - 36799
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||| ||| ||||||||||||| ||||  ||| |||| ||||||| ||||||||||| |||| ||||||||||||    
T  36649 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcact 36748  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  36749 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 36799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 69987 - 70137
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  |||||||||| |||||| | ||||||||    
T  69987 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 70086  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  70087 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 70137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10410 - 10363
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  10410 actcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatgg 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 26704257 - 26704407
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||||||||||||||||| ||||  |||||| | || |||| ||||||||||| ||| ||||||||| |||    
T  26704257 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26704356  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  26704357 tgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatgg 26704407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 26973990 - 26974140
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||||||||||||||||| ||||  |||||| | || |||| ||||||||||| ||| ||||||||| |||    
T  26973990 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26974089  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  26974090 tgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatgg 26974140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 37724095 - 37724245
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||| |||||| ||||||  |||  |||||||| || ||||  |||||||||| |||||| | ||||||||    
T  37724095 cagcttcacagattgcagttaacttcttatataggtctcaatactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcact 37724194  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  37724195 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 37724245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 23201559 - 23201710
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgc-aagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcac 131  Q
    ||||| |||| ||| || |||||||||| |||| ||||||||||||| | |||  |||||||| |||||||  |||||||||| |||||| | |||||||    
T  23201559 cagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcac 23201658  T
Q  132 ttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||| ||||| ||||  ||||||| ||||||||||||| ||||||||||||||    
T  23201659 ttgcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatgg 23201710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 21873411 - 21873590
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||| ||||  | |||||| || ||||    
T  21873411 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggttcatctctaatcaaa 21873509  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| ||| || | |||| ||||| ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  21873510 ttatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatgg 21873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 22032476 - 22032654
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    |||||||||| ||||||  ||||| || ||| ||||| |||| ||| || ||||||||||||||| |||||||||||||  |||  |||||||| || ||    
T  22032476 atacatcatattcaacacaaacatctcgtat-cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatca 22032574  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    |  || || ||||| ||| ||   | |||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  22032575 attcaagcaacacatatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgcca 22032654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 23501273 - 23501123
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || |||   || ||||||| ||||||   | ||||||    
T  23501273 cagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcact 23501174  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  ||||| ||||||||||||| |||||| |||||| ||||||||||||||    
T  23501173 ttcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatgg 23501123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 14079340 - 14079489
Alignment:
Q  34 agctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcactt 133  Q
    |||| |||| ||| || ||||||||||| ||| ||| ||||||||| || |  |||||||| || ||||  |||||||||| ||||||   |||||||||    
T  14079340 agcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcactt 14079439  T
Q  134 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    | ||||| |||| |||||||| ||||||||||||| | ||||||||||||    
T  14079440 gcactcagttctagaagtgctcgcgaggcgagagcatttgctcgccatgg 14079489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 23512318 - 23512448
Alignment:
Q  53 aacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtg 152  Q
    ||||||||||||| |||  | |||||| ||||  |||| ||| || ||||  |||||||||| ||||||   |||| || || ||||| |||||||||||    
T  23512318 aacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtg 23512417  T
Q  153 ctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||||||||||| ||||||||||||||    
T  23512418 ctcgcgaggcgagagcatctgctcgccatgg 23512448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 123131 - 123084
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  123131 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 123084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 21885015 - 21884968
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21885015 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21884968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 26172744 - 26172791
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  26172744 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 26680870 - 26680917
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26680870 actcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatgg 26680917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 26952477 - 26952524
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26952477 actcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatgg 26952524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 23572364 - 23572420
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| ||||||||||||  ||||||||||||| ||||||||||||||    
T  23572364 ctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcgccatgg 23572420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 12028391 - 12028344
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12028391 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12028344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 16674432 - 16674479
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16674432 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16674479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 17410727 - 17410774
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17410727 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17410774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 17918977 - 17918930
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17918977 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17918930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 18356607 - 18356654
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  18356607 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18356654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 18769963 - 18769785
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    |||||||||| ||||||  ||||| || ||| ||||| |||| ||| || ||||||||||||||| |||||||||||||  |||  |||||| | || ||    
T  18769963 atacatcatattcaacacaaacatctcatat-cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatca 18769865  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    |  || || ||||| ||| |    | ||||||||  |||| ||||||||||||| |||| |||||||| |||||||||||    
T  18769864 attcaagcaacacagatcactacattctcacttgcgctcagttctggaagtgctcgcgacgcgagagcatctgctcgcca 18769785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 19472545 - 19472502
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  19472545 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 19472502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 20232830 - 20232877
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20232830 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20232877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 20296128 - 20296171
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  20296128 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 20296171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20910626 - 20910579
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20910626 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20910579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 21340593 - 21340546
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21340593 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21340546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23451637 - 23451684
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23451637 actcagttctggaagtgcttgcgaggcgagagcatctgctcgccatgg 23451684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23463142 - 23463189
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23463142 actcagttctggaagtgcttgcgaggcgagagcatctgctcgccatgg 23463189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 23535415 - 23535368
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23535415 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23535368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 26665957 - 26665910
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26665957 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26665910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 26937554 - 26937507
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26937554 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26937507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 42805700 - 42805746
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 182  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  42805700 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatg 42805746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 21366485 - 21366444
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  21366485 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 24222174 - 24222215
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  24222174 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24222215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 31342403 - 31342444
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  31342403 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 31342444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 1858802 - 1858755
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  1858802 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 1858755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23458881 - 23458928
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  23458881 actcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatgg 23458928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 25229232 - 25229185
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  25229232 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 25229185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 25293388 - 25293341
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  25293388 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 25293341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 22757416 - 22757458
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgc 178  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||    
T  22757416 actcagttctggaagtgctcgcgaggcgagagcatctgctcgc 22757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 17718259 - 17718218
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  17718259 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 17718218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 18774490 - 18774531
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  18774490 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 18774531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 20805847 - 20805888
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  20805847 ttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 20805888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 21887124 - 21887165
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||    
T  21887124 ttctgtaagtgctcgcgaggcgagagcatctgctcgccatgg 21887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 174959 - 175108
Alignment:
Q  34 agctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcactt 133  Q
    |||| |||| ||| || ||||||||||||||| |||||||||||||  |||  |||||||| || |||| ||||||||||| ||||||||||||||||||    
T  174959 agcttcacagatttcagttaacttcttatataggtctcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcactt 175058  T
Q  134 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    | ||||  ||||||||||||| |||||| |||||| ||||||||| ||||    
T  175059 ggactcggttctggaagtgctcgcgaggtgagagcatctgctcgcaatgg 175108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 1549 - 1680
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| |||||| |||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| |||||||||    
T  1549 ttaacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 1648  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatg 182  Q
    |||| ||||||||||||| |||||||||||||    
T  1649 tgctcgcgaggcgagagcatctgctcgccatg 1680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 20192 - 20323
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| ||||||||||||| ||||  |||||| | || |||| ||||||||||| ||  |||| |||||||||| ||||| |||||||||    
T  20192 ttaacttcttatataggtctcattactacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaag 20291  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatg 182  Q
    |||| ||||||||||||| |||||||||||||    
T  20292 tgctcgcgaggcgagagcatctgctcgccatg 20323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 48388 - 48238
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||||||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||| |||||| |||||| | | || |||    
T  48388 cagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttact 48289  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  48288 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 48238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 19863171 - 19863321
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||| |||||| |||||| | |||| |||    
T  19863171 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttact 19863270  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19863271 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 19873313 - 19873463
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| ||  |||  |||||||||| |||||| | |||| |||    
T  19873313 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttact 19873412  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19873413 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19873463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 25642093 - 25641965
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||||||||||  ||||| | |||||||||| ||||| |||||||||    
T  25642093 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaag 25641994  T
Q  151 tgctggcgaggcgagagcgtctgctcgcc 179  Q
    |||| ||||||||||||| ||||||||||    
T  25641993 tgctcgcgaggcgagagcatctgctcgcc 25641965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 183
Target Start/End: Original strand, 22432461 - 22432593
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||| |||||| |||||| | | || ||||| ||||| |||||||||    
T  22432461 ttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaacttgcactcagttctggaag 22432560  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||||| ||||||||||||||    
T  22432561 tgctcgcgaggcgagagcatctgctcgccatgg 22432593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 22438964 - 22439143
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||||||||||  ||||| || ||  ||||| |||| ||| || |||||||||||||||  |||||||||||| ||||  |||||||| || | ||    
T  22438964 acatcataatcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtccatctcaaatcgaa 22439062  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| |||||| | | |||||||| ||||| || |||||||||| ||||||||||||| ||||||||| ||||    
T  22439063 ttatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagagcatctgctcgctatgg 22439143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 22334801 - 22334669
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| |||||||| |||| || |  |||| ||| || ||||  |||||||||| |||||| | |||||||||| | ||| |||||||||    
T  22334801 ttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcacttgcattcagttctggaag 22334702  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||||| ||||||| ||||||    
T  22334701 tgctcgcgaggcgagagcatctgctcaccatgg 22334669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 15041444 - 15041328
Alignment:
Q  67 gtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgaga 166  Q
    ||||||||||||| || |  |||||||| || |||||||||||| ||| ||||| ||   |||||||| ||||||||||||||||| | |||||||||||    
T  15041444 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggttgcgaggcgaga 15041345  T
Q  167 gcgtctgctcgccatgg 183  Q
    || |||||||| |||||    
T  15041344 gcatctgctcgtcatgg 15041328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 16924741 - 16924657
Alignment:
Q  99 caaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||| ||||||||   |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16924741 caaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16924657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 21739950 - 21739800
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| || |||||| ||| |||||||||  |||| |||||| | ||||||  |||| |||||| ||||||   | |||| |    
T  21739950 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaat 21739851  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||| ||||||    
T  21739850 tgtactcagttctggaagtgctcgcgaggcgagagcatctgctcaccatgg 21739800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 18907299 - 18907449
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||||||| || ||||| ||||| ||| ||| |||||||||  |||  |||||| | || |||  ||||||||||| ||||||   | |||| |    
T  18907299 cagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatt 18907398  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  18907399 tgcactctgttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18907449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 12496588 - 12496635
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12496588 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12496635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 21702568 - 21702614
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21702614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 15894339 - 15894207
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||| || |||||| ||| ||||||||| ||||  |||||||| ||||||   ||||||||||   ||||   | |||||||| ||||| |||||||||    
T  15894339 ttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcacttgcactcagttctggaag 15894240  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| |||||| |||||  ||||||||||||||    
T  15894239 tgctcgcgaggtgagagactctgctcgccatgg 15894207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 16965172 - 16965088
Alignment:
Q  99 caaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||| ||| ||||   |||||||| ||| | ||||||||||||| | ||||||||||| ||||||||||||||    
T  16965172 caaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgctcgtgaggcgagagcatctgctcgccatgg 16965088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 27553433 - 27553385
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  27553433 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggt 27553385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 31164721 - 31164625
Alignment:
Q  87 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| || ||||||||||||||||  |||||||   |||||||| |||||||||||||||| || ||||||| || || | ||||| ||||||    
T  31164721 tccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtactcgcgaggcaagggcatatgctcaccatgg 31164625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 8244141 - 8244184
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  8244141 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 8244184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 11567143 - 11567186
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  11567143 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 11567186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 12706968 - 12707015
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12706968 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12707015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 16741486 - 16741533
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16741486 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16741533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 17804477 - 17804524
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17804477 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17804524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 19870871 - 19870914
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  19870871 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 19870914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 22429856 - 22429809
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22429856 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 22863226 - 22863269
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  22863226 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 22863269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 23395349 - 23395392
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  23395349 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 23395392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 23657246 - 23657199
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23657246 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23657199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 25135498 - 25135451
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  25135498 actcgattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 25135451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 27415768 - 27415721
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  27415768 actcaattctggaagtgctcgcgaggcgagagcatccgctcgccatgg 27415721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 27567435 - 27567388
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  27567435 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 27567388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 16523222 - 16523181
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  16523222 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16523181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 22592624 - 22592583
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  22592624 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22592583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 23990201 - 23990242
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcg 177  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  23990201 actcaattctggaagtgctcgcgaggcgagagcatctgctcg 23990242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 12618670 - 12618630
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctc 176  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  12618670 actcaattctggaagtgctcgcgaggcgagagcatctgctc 12618630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 22059577 - 22059521
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  22059577 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatgg 22059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 1587557 - 1587510
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  1587557 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 1587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 1644985 - 1645032
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  1644985 actcaattctggatgtgctcgcgaggcgagagcatttgctcgccatgg 1645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 5616640 - 5616593
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  5616640 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 5616593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 9482119 - 9482072
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| | |||||| |||||    
T  9482119 actcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatgg 9482072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 14472550 - 14472597
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  14472550 actcaattctggatgtgctcgcgaggcgagagcatatgctcgccatgg 14472597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20907807 - 20907760
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| | ||||||||||| ||||||||||||||    
T  20907807 actcagttctggaagtgctcgtgaggcgagagcatctgctcgccatgg 20907760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 21834726 - 21834667
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||| |||||||||||    
T  21834726 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatggt 21834667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 18180789 - 18180830
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||    
T  18180789 ttctggaagtgctcgcgaggcgagagcatctgctctccatgg 18180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 19790599 - 19790558
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||    
T  19790599 ttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 19790558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 22831666 - 22831710
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatatta 47  Q
    ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  22831666 acatcataatcaacaacaacatatcttattcagcttcacagatta 22831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 18363 - 18231
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||| ||| ||| ||||||||| || |  |||||||| || ||||  ||||||||||||||||| | |||||||||| ||||| |||||||||    
T  18363 ttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcacttgcactcagttctggaag 18264  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||||| ||||||||||||||    
T  18263 tgctcgcgaggcgagagcatctgctcgccatgg 18231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 18402 - 18581
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||||||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  18402 acatcataatcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaa 18500  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| |||||| | |||||||||| ||||| ||||||||| ||| | ||||||||||| | ||||||||||||    
T  18501 ttatgcgacacatatcgcaatatcctcacttgcactcagttctggaagcgctcgtgaggcgagagcatttgctcgccatgg 18581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 76997 - 76950
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  76997 actcaattctggaagtgctcgcgaggcgagagcatctgcttgccatgg 76950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 65703 - 65571
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  |||||||| | |||||| | |||||||||| ||||| |||||||||    
T  65703 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaag 65604  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||  |||||||||||| ||||||||||||||    
T  65603 tgctcacgaggcgagagcatctgctcgccatgg 65571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 53845 - 53892
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  53845 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 53892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 9e-29; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 13569674 - 13569853
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||| ||| ||||  |||||||| || ||||    
T  13569674 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaa 13569772  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||  |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  13569773 ttatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13569853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 23843640 - 23843819
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||| ||||||||||| ||||| || ||  ||||| |||| ||| || ||||| ||||||||| ||| |||||| || ||||  |||||||| || ||||    
T  23843640 acattataatcaacattaacatttcataa-cagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaa 23843738  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23843739 ttatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23843819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 183
Target Start/End: Original strand, 15093982 - 15094114
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| ||| ||||||||  ||||  |||||||| || ||||  |||||||||| |||||| | |||| ||||| ||||| || ||||||    
T  15093982 ttaacttcttatataggtcacattactaaccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaag 15094081  T
Q  151 tgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||||| || |||||||||||    
T  15094082 tgctcgcgaggcgagagcatcagctcgccatgg 15094114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 44675794 - 44675973
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||| ||| ||| |||||||||  | |  |||||||| || ||||    
T  44675794 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaa 44675892  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| ||||||   |||||||||| ||||| ||||||||||||| |||||| |||||| ||||||||||||||    
T  44675893 ttatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatgg 44675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 12570212 - 12570362
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| || |||||| ||| ||||||||| ||||  |||||||| ||||||   ||||||||||  |||||   | ||||||    
T  12570212 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 12570311  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12570312 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12570362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 15121762 - 15121581
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    ||||||||||||||||   ||||| || ||| ||||  |||| ||| || ||||||||||||||| |||||||||||||  ||   ||||| || |||||    
T  15121762 atacatcataatcaactcaaacatctcatat-cagcctcacagattgcagttaacttcttatataggtctcattactacctaatggtccatgtctaaaca 15121664  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |   || ||||||| ||||||   | |||||||| ||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  15121663 agttattcgacacagatcgcaaagttctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctcaccatgg 15121581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 15125028 - 15124932
Alignment:
Q  87 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| |||||||  |||||||||| |||| | | |||||||||| ||||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  15125028 tccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatgg 15124932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 2015058 - 2015105
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  2015058 actcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatgg 2015105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 9556810 - 9556857
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9556810 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 9556857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 19757429 - 19757380
Alignment:
Q  134 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19757429 gtactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19757380  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 19782377 - 19782426
Alignment:
Q  134 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19782377 gtactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19782426  T

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Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 4561159 - 4561116
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  4561159 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 4561116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 5756763 - 5756720
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  5756763 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 5756720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 11250387 - 11250340
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  11250387 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 11250340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 15353132 - 15353085
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15353132 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15353085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 16243222 - 16243179
Alignment:
Q  140 aattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  16243222 aattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16243179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 18222204 - 18222157
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  18222204 actcaattctggaagtgctcgcgaggcgagagcatcagctcgccatgg 18222157  T

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Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 26243491 - 26243444
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26243491 actcagttctggaagtgcttgcgaggcgagagcatctgctcgccatgg 26243444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 27534305 - 27534352
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  27534305 actcaattctggatgtgctcgcgaggcgagagcatctgctcgccatgg 27534352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 33742658 - 33742701
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  33742658 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 33742701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 36133788 - 36133741
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  36133788 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 36133741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 16487914 - 16487856
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16487914 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16487856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 42997275 - 42997229
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatgg 42997229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 16351668 - 16351627
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  16351668 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16351627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 16356772 - 16356731
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  16356772 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16356731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 43255981 - 43255940
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  43255981 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 43255940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 45938433 - 45938474
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  45938433 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 45938474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 16678416 - 16678368
Alignment:
Q  135 tactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  16678416 tactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatgg 16678368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 1951587 - 1951540
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| |||| |||||||| ||||||||||||||    
T  1951587 actcagttctggaagtgctcgcgaagcgagagcatctgctcgccatgg 1951540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 17152313 - 17152266
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||||||||    
T  17152313 actcagttctggaagtgctcgcgaggcgagaacatctgctcgccatgg 17152266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 18237172 - 18237219
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  18237172 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 18237219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23139550 - 23139597
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23139550 actcagttctggaagtgctcgcgaggcgagagcatccgctcgccatgg 23139597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 28569270 - 28569223
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  28569270 actcaattctggaagtgctcacgaagcgagagcatctgctcgccatgg 28569223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 14708459 - 14708413
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| |||| |||| ||||||||||||| ||||||||||||||    
T  14708459 ctcaattcaggaaatgctcgcgaggcgagagcatctgctcgccatgg 14708413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 3413082 - 3413123
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  3413082 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 3413123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 25555802 - 25555843
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| | ||||||||||| ||||||||||||||    
T  25555802 ttctggaagtgctcgtgaggcgagagcatctgctcgccatgg 25555843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 62; Significance: 5e-27; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 14833 - 15013
Alignment:
Q  2 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaa 101  Q
    ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || |||||||||| || || |||||||| || |||    
T  14833 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaa 14931  T
Q  102 aacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  |||||||||| || ||| | |||||||| | ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  14932 attatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 23848 - 24028
Alignment:
Q  2 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaa 101  Q
    ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || |||||||||| || |  ||||||||  | |||    
T  23848 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaa 23946  T
Q  102 aacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  |||||||||| || ||| | |||||||| | ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23947 attatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 39272 - 39452
Alignment:
Q  2 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaa 101  Q
    ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || |||||||||| || |  ||||||||  | |||    
T  39272 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaa 39370  T
Q  102 aacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  |||||||||| || ||| | |||||||| | ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  39371 attatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 39452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 62 - 183
Target Start/End: Complemental strand, 15877727 - 15877606
Alignment:
Q  62 tatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgagg 161  Q
    |||| ||||||||||||| ||||  |||||||| || ||||  |||||||||  |||||| | |||||||||| ||||| ||||||||||||| ||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgagg 15877628  T
Q  162 cgagagcgtctgctcgccatgg 183  Q
    ||||||| ||||||||||||||    
T  15877627 cgagagcatctgctcgccatgg 15877606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 23077435 - 23077256
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    ||||||||| |||||| ||||| || ||  ||||| |||| |||||| | ||||||| ||||| |||||||||||||  |||  |||||||| || ||||    
T  23077435 acatcataaccaacataaacatttcataa-cagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaa 23077337  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| ||||||   |||||| ||| | ||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  23077336 ttatgcgacacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 17525109 - 17524951
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  17525109 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaa 17525011  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggc 162  Q
      |||||||||| |||||| | |||||||||| ||||| || |||||||||| |||||||    
T  17525010 ttatgcgacacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggc 17524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 23408623 - 23408773
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||| | ||| ||  || |||||| ||||  |||||||| || ||||  |||||||||| |||||| | ||||||||    
T  23408623 cagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 23408722  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  23408723 tgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23408773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 856327 - 856473
Alignment:
Q  34 agctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcactt 133  Q
    |||| |||| ||| || ||||||||||||||| |||||||||||||  |||  |||||| | || |||  || || ||||| ||| ||   | |||||||    
T  856327 agcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcactt 856426  T
Q  134 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    | ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  856427 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgcca 856473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 14878464 - 14878283
Alignment:
Q  2 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaa-tccatctccaaaca 100  Q
    ||||||||| ||||||| ||||| || || | |||| |||| ||| || ||||||||||||||| ||| |||||||||  | |   |||||||| || ||    
T  14878464 tacatcatattcaacattaacatttcataat-agcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatca 14878366  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||  |||||||||| |||||| | |||||| | | ||||  |||||||||||||  |||||||||| | ||||||||||||||    
T  14878365 aattatgcgacacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaacatctgctcgccatgg 14878283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 19725748 - 19725690
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19725748 tcctaacttgtattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19725690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 23052913 - 23052855
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  23052913 tcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcatctgctcgccatgg 23052855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 16369692 - 16369748
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  16369692 ctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatgg 16369748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 16910034 - 16910090
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  16910034 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 16910090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 26190843 - 26190787
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26190843 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26190787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 326990 - 326943
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  326990 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 326943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 1598306 - 1598259
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  1598306 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 1598259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 3833954 - 3834001
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  3833954 actcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3834001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 7109982 - 7110025
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  7109982 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 7110025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 7113917 - 7113960
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  7113917 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 7113960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 11300337 - 11300290
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  11300337 actcaattctggatgtgctcgcgaggcgagagcatctgctcgccatgg 11300290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 11594965 - 11594918
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  11594965 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 11594918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 15060553 - 15060632
Alignment:
Q  104 catgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||| ||||||   |||| ||||| | ||| | ||||||||||| ||||||||||||| ||||||||||||||    
T  15060553 catgcgacacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15060632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 15482942 - 15482989
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15482942 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15482989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 15849911 - 15849864
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15849911 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15849864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 15941730 - 15941683
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15941730 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15941683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 16690499 - 16690546
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16690499 actcacttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16690546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 16697072 - 16697119
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16697072 actcacttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16697119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 16797880 - 16797833
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16797880 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16797833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 16808707 - 16808660
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16808707 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16808660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 17242252 - 17242299
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17242252 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17242299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20461326 - 20461279
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20461326 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20461279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 22337003 - 22337046
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  22337003 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 22337046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 27409469 - 27409426
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27409469 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27409426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 38814664 - 38814711
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  38814664 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 38814711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 42326224 - 42326271
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  42326224 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 42326271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 322888 - 322930
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  322888 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggt 322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 1982639 - 1982589
Alignment:
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  1982639 tgtactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatgg 1982589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 12173068 - 12173126
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12173068 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12173126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 3402775 - 3402734
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  3402775 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3402734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 11298352 - 11298307
Alignment:
Q  138 tcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  11298352 tcaattctggaagtgctcgcgaggcgagagcatctgatcgccatgg 11298307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 12496554 - 12496595
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  12496554 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12496595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 12037787 - 12037731
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  12037787 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatgg 12037731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 7793172 - 7793125
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  7793172 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 7793125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 15617657 - 15617700
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  15617657 actcaattctggaagtgctcgcgaggcaagagcatctgctcgcc 15617700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 22321948 - 22321991
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||    
T  22321948 actcaattttggaagtgctcgcgaggcgagagcatctgctcgcc 22321991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 11863073 - 11863131
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||| |||||||| ||||||| ||  |||||||||||| ||||||||||||||    
T  11863073 tcctaacttgcactcaattttggaagtacttacgaggcgagagcatctgctcgccatgg 11863131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 11557204 - 11557163
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  11557204 ttctggaagtgctcgcgaggcgagagcatatgctcgccatgg 11557163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 15051707 - 15051856
Alignment:
Q  34 agctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcactt 133  Q
    |||| |||| ||| || ||||| ||||||||| ||| || ||||||  |||  |||||| | || |||  ||||||||||| ||| ||   |||| ||||    
T  15051707 agcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcacaacatcctaactt 15051806  T
Q  134 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    | | ||| | || |||||||| ||||||||||||| ||||||||||||||    
T  15051807 gcattcagtcctagaagtgctcgcgaggcgagagcatctgctcgccatgg 15051856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 18383736 - 18383695
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  18383736 ttcttgaagtgctcgcgaggcgagagcatctgctcgccatgg 18383695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 2897643 - 2897603
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatg 182  Q
    ||||||||||||| ||||||||||||| |||||||| ||||    
T  2897643 ttctggaagtgctcgcgaggcgagagcatctgctcgtcatg 2897603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 14179596 - 14179672
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactac 79  Q
    ||||||||||||||| |||||  |||||  ||||| |||| |||| | ||||||||||||||| ||| || ||||||    
T  14179596 acatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatactac 14179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 20723288 - 20723328
Alignment:
Q  143 tctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||| ||||||||||||| ||| ||||||||||    
T  20723288 tctggaagtgctcgcgaggcgagagcatctactcgccatgg 20723328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 16306 - 16127
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| |||  |||||||| ||||  |||| ||| || ||||    
T  16306 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcatattactacccaagggtccacctctaatcaaa 16208  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||||||| ||||||    ||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  16207 ttatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcgagggcatctgctcgccatgg 16127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 6264 - 6444
Alignment:
Q  2 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaa 101  Q
    ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || || ||||||| || | ||||||||| || |||    
T  6264 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaa 6362  T
Q  102 aacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  |||||||||| ||||||   |||||||||| || || ||||||||||||| |||||| |||||| ||||||||||||||    
T  6363 attatgcgacacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggagagagcatctgctcgccatgg 6444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 15646 - 15742
Alignment:
Q  87 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15646 tccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 15626 - 15447
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||    
T  15626 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaa 15528  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      | |||||||| ||| || | |||||||||| ||| | |||| |||||| | ||||||||||||| |||||| |||||||    
T  15527 ttaagcgacacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcgagagcatctgcttgccatgg 15447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 773 - 923
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||| ||| |||||||||||||  |||  |||||||| || ||||  |||||||||| |||||| | |||||| |    
T  773 cagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatt 872  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  ||||| |||||||||||||  |||||||||| | ||||||||||||||    
T  873 tacactcagttctggaagtgctcacgaggcgagaacatctgctcgccatgg 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 34838 - 34688
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| ||||||||| ||| ||||||||| ||||  |||||||| ||||||   ||| |||| |  ||||| | | ||||||    
T  34838 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcact 34739  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  34738 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 34688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 64133 - 64180
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  64133 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 64180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 76017 - 76064
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  76017 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 76064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 1137 - 1034
Alignment:
Q  51 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 150  Q
    ||||||||||||||| |||  |||||||| |||| ||||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| |||||||||    
T  1137 ttaacttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 1038  T
Q  151 tgct 154  Q
    ||||    
T  1037 tgct 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 6165 - 6087
Alignment:
Q  105 atgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||| |||||   |||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6165 atgcgacacaagtcgcaacatcctcacttgcattcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 3904 - 4082
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||| ||||||||||| ||||| || ||  ||||| |||| ||| || ||||  ||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  3904 acattataatcaacattaacatttcataa-cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaa 4002  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||| ||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| | | ||||||||||    
T  4003 t-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatgg 4082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 8335 - 8513
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||| ||||||||||| ||||| || ||  ||||| |||| ||| || ||||  ||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  8335 acattataatcaacattaacatttcataa-cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaa 8433  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
      |||||| ||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| | | ||||||||||    
T  8434 t-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatgg 8513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 6272 - 6194
Alignment:
Q  105 atgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||| |||||||||| | |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  6272 atgcgaaacaaatcgcaatatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 7006 - 6856
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| ||||||||| ||| |||||||||  |||   ||||| | || |||  ||||||||||| ||||||   | |||| |    
T  7006 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaat 6907  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  6906 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 21734 - 21584
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| ||||||||| |||||||||||||  |||  |||||| | || |||  || || ||||| ||| ||   | ||||||    
T  21734 cagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcact 21635  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21634 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 29626 - 29476
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||| ||||||||| |||||||||||||  |||  |||||| | || |||  || || ||||| ||| ||   | ||||||    
T  29626 cagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcact 29527  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  29526 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 29476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12918 - 13099
Alignment:
Q  1 atacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaaca 100  Q
    ||||||||||||||||  |||||| || |||| |||| |||| ||| || ||||||||||||||| |||||||||||||  |||  ||||||   || ||    
T  12918 atacatcataatcaactccaacatctcatatt-agcttcacaaattgcagttaacttcttatataggtctcattactacctaagggtccatccataatca 13016  T
Q  101 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |  || || || || ||| ||   | |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  13017 attcaagcaactcatatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 61438 - 61395
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  61438 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 61395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 65352 - 65311
Alignment:
Q  138 tcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  65352 tcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 65311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 32679 - 32768
Alignment:
Q  87 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctc 176  Q
    |||| ||| |||||||  |||||||||| |||||  | |||||||||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  32679 tccaactctaaacaaattatgcgacacagatcgcgatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctc 32768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 8779 - 8826
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8779 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 8826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 4712 - 4768
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  4712 ctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 4768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 9614 - 9662
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9614 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggt 9662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 18490 - 18434
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  18490 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18434  T

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Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 13911 - 13855
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  13911 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13855  T

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Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 46655 - 46520
Alignment:
Q  33 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 132  Q
    ||||| |||| ||| || ||||||||||||||| ||| |||||||||  |||| |||||| | || |||   |||||||||| ||||||   |||| |||    
T  46655 cagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 46556  T
Q  133 tgtactcaattctggaagtgctggcgaggcgagagc 168  Q
    || ||||| ||||||||||||| |||||| ||||||    
T  46555 tgcactcagttctggaagtgctcgcgaggagagagc 46520  T

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Target: scaffold0013 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 2499 - 2452
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2499 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2452  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 24794 - 24747
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  24794 actcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatgg 24747  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 2157 - 2203
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 30570 - 30523
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  30570 actcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatgg 30523  T

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Target: scaffold1124 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 2066 - 2214
Alignment:
Q  32 tcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcac 131  Q
    |||||| |||| ||| || ||||||||||||||| |||||||||||||  |||  |||||| | || |||  || || ||||| |||  |   | |||||    
T  2066 tcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcac 2165  T
Q  132 ttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    ||| ||||| |||| |||||||| ||||||||||||| |||||||||||    
T  2166 ttgcactcagttctcgaagtgctcgcgaggcgagagcatctgctcgcca 2214  T

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Target: scaffold0615 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 1918 - 1862
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  1918 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 1862  T

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Target: scaffold0546 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 2179 - 2227
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  2179 actcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggt 2227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 6083 - 6039
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||    
T  6083 actcagttctggaagtgctcgcgaggcgagagcatcagctcgcca 6039  T

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Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 15618 - 15662
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 181  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccat 15662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 11128 - 11080
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  11128 actcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggt 11080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 45398 - 45445
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  45398 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 45445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 7224 - 7268
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||    
T  7224 actcagttctggaagtgctcgcgaggcgagagcatcagctcgcca 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 15244 - 15196
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 184  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  15244 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggt 15196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 23501 - 23445
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  23501 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 23445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 38436 - 38286
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 102  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| ||  |||||||||||||| ||| ||||||||| ||||  |||| ||| || ||||    
T  38436 acatcatattcaacattaacatttcataa-cagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatcaaa 38338  T
Q  103 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgct 154  Q
      |||||||||| ||||||   | |||||||| ||| | |||||||||||||    
T  38337 ttatgcgacacagatcgcaaagttctcacttgcacttagttctggaagtgct 38286  T

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Target: scaffold1461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 209 - 256
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  209 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 2082 - 2129
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  2082 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 611 - 658
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  611 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 4927 - 4884
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  4927 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 18634 - 18677
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  18634 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 18677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 18458 - 18411
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  18458 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 4050 - 4003
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  4050 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 3356 - 3309
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  3356 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 19843 - 19796
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19843 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 10183 - 10230
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  10183 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 10230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 19468 - 19515
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19468 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 62541 - 62587
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatgg 62587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 13190 - 13231
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  13190 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 66241 - 66194
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  66241 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 66194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 56377 - 56424
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  56377 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 56424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 191100 - 191059
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  191100 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 192802 - 192762
Alignment:
Q  143 tctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||| || ||||||||||||| ||||||||||||||    
T  192802 tctggaagtactcgcgaggcgagagcatctgctcgccatgg 192762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 228199 - 228152
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  228199 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 71593 - 71640
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  71593 actcaattctggaagtgctcgcgaggcgagagcatcagctcgccatgg 71640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 96886 - 96933
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  96886 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 96933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 413870 - 413829
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  413870 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 413829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 139990 - 140037
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  139990 actcagttctggaagtgctcgcgaggcgagagcatatgctcgccatgg 140037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 16488 - 16442
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||||||||||| |||||||||| || ||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatgg 16442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 2255 - 2214
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  2255 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 10115 - 10074
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  10115 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 1790 - 1831
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  1790 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 1831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 576 - 617
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  576 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 3139 - 3180
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  3139 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 6805 - 6846
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  6805 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 1324 - 1268
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||| | ||||||||||||| ||||||||||||| ||||||||| ||||    
T  1324 ctcacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgctatgg 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 182
Target Start/End: Complemental strand, 4891 - 4712
Alignment:
Q  2 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaa 101  Q
    ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || | ||||||||||||| |||  | | |||| ||||| |||| |||  | |||    
T  4891 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaa 4793  T
Q  102 aacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 182  Q
    |  ||||||||||||||||| | |||||| ||| ||||  || ||||| |||| ||||||||||||| ||| ||| |||||    
T  4792 attatgcgacacaaatcgcaatgtcctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatg 4712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 11660 - 11707
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  11660 actcagttatggaagtgctcgcgaggcgagagcatctgctcgccatgg 11707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 15377 - 15424
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  15377 actcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatgg 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 7096 - 7049
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  7096 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 7049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 19117 - 19070
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  19117 actcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgg 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 13313 - 13266
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| |||||| |||||| ||||||||||||||    
T  13313 actcagttctggaagtgctcgcgaggagagagcatctgctcgccatgg 13266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 35336 - 35289
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  35336 actcagttctggaagtgctcgcgaggcgagagcatctcctcgccatgg 35289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 36585 - 36632
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  36585 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 36632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 5826 - 5779
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  5826 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 5779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 21405 - 21350
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| |||||||||||    
T  21405 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgcca 21350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 58544 - 58501
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 179  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||    
T  58544 actcaattctagaagtgctcgcgaggcgagagcatctgctcgcc 58501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23496 - 23543
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  23496 actcagttatggaagtgctcgcgaggcgagagcatctgctcgccatgg 23543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 173570 - 173617
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  173570 actcagttatggaagtgctcgcgaggcgagagcatctgctcgccatgg 173617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 673 - 731
Alignment:
Q  125 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||| ||||||    
T  673 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcaccatgg 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 5885 - 5923
Alignment:
Q  145 tggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  5885 tggaagtgctcgcgaggcgagagcatctgctcgccatgg 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 7080 - 7118
Alignment:
Q  145 tggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  7080 tggaagtgctcgcgaggcgagagcatctgctcgccatgg 7118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 9701 - 9747
Alignment:
Q  137 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 639 - 680
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  639 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 16940 - 16899
Alignment:
Q  142 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  16940 ttcttgaagtgctcgcgaggcgagagcatctgctcgccatgg 16899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 24006 - 24086
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaag 84  Q
    |||||||| ||||||  ||||| |||||  ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||    
T  24006 acatcatattcaacactaacatctcttaa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaag 24086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 26706 - 26742
Alignment:
Q  147 gaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  26706 gaagtgctcgcgaggcgagagcatctgctcgccatgg 26742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 7575 - 7628
Alignment:
Q  127 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    |||||||| ||||| || |||||||||| ||||||||||||| | |||||||||    
T  7575 ctcacttgcactcagttttggaagtgctcgcgaggcgagagcatttgctcgcca 7628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 2114 - 2167
Alignment:
Q  130 acttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||| ||| || |||||||||| ||||||||||||| ||| ||||||||||    
T  2114 acttgtattcagttatggaagtgctcgcgaggcgagagcatctactcgccatgg 2167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 9796 - 9849
Alignment:
Q  130 acttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 183  Q
    ||||||| ||| || |||||||||| ||||||||||||| ||| ||||||||||    
T  9796 acttgtattcagttatggaagtgctcgcgaggcgagagcatctactcgccatgg 9849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 16443 - 16487
Alignment:
Q  3 acatcataatcaacatcaacatgtcttattcagctacacatatta 47  Q
    ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  16443 acatcataatcaacaacaacatatcttattcagcttcacagatta 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 192142 - 192098
Alignment:
Q  136 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 180  Q
    |||||||||||||||||||  |||||||||||| || ||||||||    
T  192142 actcaattctggaagtgctcacgaggcgagagcatcagctcgcca 192098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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