View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1631-INSERTION-5 (Length: 194)
Name: NF1631-INSERTION-5
Description: NF1631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1631-INSERTION-5 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 4142870 - 4142690
Alignment:
| Q |
8 |
gttactgctttcatggaatgaaagttgccgtggacgttcaagaacacccaacacctgcaccatctccatctctatctctttcagatacagtgaaatctag |
107 |
Q |
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| T |
4142870 |
gttactgctttcacggaatgaaagttgccgtggacgttcaagaacacccaacacctgcaccatctccatctct------ttcagatacagcgaaatccgg |
4142777 |
T |
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| Q |
108 |
tggtggttctattttaccatcaatgtgtacatgctttgggattattgttgctaatgtggtttatgtgagtttgtttttagtggggat |
194 |
Q |
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| T |
4142776 |
tggtgattctattttgccatcaatgtatacatgctttgggattattgttgctaatgttgtttatgtgagtttggttttagtggggat |
4142690 |
T |
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