View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16310_low_8 (Length: 206)

Name: NF16310_low_8
Description: NF16310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16310_low_8
NF16310_low_8
[»] chr1 (13 HSPs)
chr1 (11-189)||(1843900-1844078)
chr1 (68-157)||(37097371-37097461)
chr1 (56-160)||(15214303-15214408)
chr1 (45-108)||(12189981-12190044)
chr1 (45-161)||(13208586-13208704)
chr1 (45-151)||(16222763-16222870)
chr1 (56-136)||(5911683-5911764)
chr1 (15-108)||(18308177-18308270)
chr1 (11-151)||(51758738-51758879)
chr1 (9-125)||(28636915-28637031)
chr1 (56-106)||(3399653-3399703)
chr1 (57-108)||(897484-897535)
chr1 (56-88)||(15204643-15204675)
[»] chr5 (17 HSPs)
chr5 (11-159)||(17037520-17037669)
chr5 (11-157)||(5079038-5079185)
chr5 (45-157)||(31068971-31069083)
chr5 (17-157)||(7410803-7410944)
chr5 (45-138)||(9354397-9354491)
chr5 (56-125)||(12042196-12042265)
chr5 (56-136)||(30786267-30786348)
chr5 (13-157)||(23679420-23679565)
chr5 (13-157)||(23855246-23855391)
chr5 (13-104)||(19985028-19985119)
chr5 (56-108)||(9333580-9333632)
chr5 (12-136)||(31571029-31571158)
chr5 (45-98)||(42076086-42076139)
chr5 (58-98)||(10869476-10869516)
chr5 (56-108)||(40402028-40402080)
chr5 (58-108)||(37233061-37233111)
chr5 (74-138)||(18191886-18191951)
[»] chr7 (13 HSPs)
chr7 (10-108)||(26608512-26608610)
chr7 (10-158)||(9242457-9242606)
chr7 (13-108)||(30089764-30089859)
chr7 (11-136)||(26621065-26621191)
chr7 (11-157)||(4685377-4685524)
chr7 (20-157)||(26224961-26225099)
chr7 (13-136)||(26619080-26619202)
chr7 (11-105)||(20277334-20277428)
chr7 (56-157)||(26205434-26205536)
chr7 (13-98)||(16086526-16086611)
chr7 (11-157)||(10022103-10022250)
chr7 (46-104)||(8241630-8241688)
chr7 (64-108)||(3374330-3374374)
[»] chr4 (13 HSPs)
chr4 (12-157)||(47066009-47066155)
chr4 (12-157)||(53300330-53300476)
chr4 (11-159)||(43600244-43600393)
chr4 (11-159)||(1152021-1152170)
chr4 (11-158)||(1684926-1685074)
chr4 (22-106)||(4904125-4904209)
chr4 (22-108)||(4881054-4881140)
chr4 (11-69)||(27739749-27739807)
chr4 (57-108)||(24559015-24559066)
chr4 (59-105)||(48464072-48464118)
chr4 (12-104)||(21539247-21539338)
chr4 (10-105)||(37750963-37751058)
chr4 (56-88)||(21317487-21317519)
[»] chr2 (11 HSPs)
chr2 (12-157)||(30266982-30267128)
chr2 (12-155)||(44920939-44921082)
chr2 (11-137)||(31342690-31342817)
chr2 (10-98)||(24479191-24479279)
chr2 (11-85)||(7702481-7702555)
chr2 (45-108)||(41573422-41573485)
chr2 (11-88)||(22966574-22966651)
chr2 (56-104)||(40016624-40016672)
chr2 (12-138)||(7718183-7718310)
chr2 (11-108)||(15513696-15513793)
chr2 (56-108)||(11017486-11017538)
[»] chr6 (13 HSPs)
chr6 (11-157)||(16734784-16734931)
chr6 (10-158)||(6684072-6684220)
chr6 (11-157)||(11936741-11936888)
chr6 (11-149)||(12591820-12591959)
chr6 (13-157)||(14669322-14669467)
chr6 (11-157)||(15361694-15361841)
chr6 (11-157)||(17719697-17719844)
chr6 (11-125)||(11948721-11948835)
chr6 (56-108)||(29667934-29667986)
chr6 (46-158)||(15690416-15690529)
chr6 (11-88)||(23904327-23904403)
chr6 (56-108)||(23264515-23264567)
chr6 (60-88)||(9631178-9631206)
[»] chr8 (17 HSPs)
chr8 (12-157)||(25638786-25638932)
chr8 (13-157)||(25637623-25637768)
chr8 (17-158)||(28249055-28249197)
chr8 (11-159)||(45356086-45356235)
chr8 (10-108)||(5650918-5651016)
chr8 (11-158)||(19369884-19370032)
chr8 (11-157)||(17634445-17634592)
chr8 (11-157)||(5528722-5528869)
chr8 (11-157)||(19448427-19448574)
chr8 (11-157)||(19532502-19532649)
chr8 (14-108)||(14997650-14997744)
chr8 (14-105)||(6801807-6801898)
chr8 (46-138)||(6403591-6403684)
chr8 (13-157)||(18766896-18767041)
chr8 (56-125)||(29345443-29345512)
chr8 (13-98)||(6223440-6223525)
chr8 (56-108)||(31347378-31347430)
[»] chr3 (14 HSPs)
chr3 (12-157)||(7407729-7407875)
chr3 (11-152)||(13845976-13846118)
chr3 (13-148)||(1627923-1628059)
chr3 (17-157)||(2550145-2550286)
chr3 (11-108)||(2943188-2943285)
chr3 (11-157)||(1654555-1654702)
chr3 (13-108)||(36035318-36035413)
chr3 (56-108)||(26707888-26707940)
chr3 (56-125)||(16457350-16457419)
chr3 (13-105)||(9633418-9633510)
chr3 (45-108)||(5498507-5498570)
chr3 (45-88)||(26735683-26735726)
chr3 (11-88)||(35083025-35083102)
chr3 (11-105)||(2179959-2180053)
[»] scaffold0684 (1 HSPs)
scaffold0684 (10-157)||(720-868)
[»] scaffold0576 (1 HSPs)
scaffold0576 (11-157)||(6678-6825)
[»] scaffold0069 (1 HSPs)
scaffold0069 (11-157)||(40672-40819)


Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 1844078 - 1843900
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1844078 agataatactataaaatgcaattaaagcccttcagtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaacatttttcttat 1843979  T
Q  111 tccagttacaattttaagtgttactaaaggtcattattgtagtagtgatcattcaatgattctcataaacattaaaact 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1843978 tccagttacaattttaagtgttactaaaggtcattattgtagtagtgatcattcaatgattctcataaacattaaaact 1843900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 37097371 - 37097461
Alignment:
Q  68 ttgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |||||||||||||||||||||  |||||||| |||||||||  |  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  37097371 ttgttcaaatgttactaaattttatcagtaacatttttcttgatttagttacaattttcaagtgttactaaatgtcattattgtagtagtg 37097461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 15214408 - 15214303
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaaggtcattattgtagta 154  Q
    |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||  |  |||| ||||||| ||||||||||||| | | |||||||||||    
T  15214408 tttacccaacaattgttcaaatattactaaatttaattagtaaaatttttcttgatttagttgcaattttcaagtgttactaaatgccgttattgtagta 15214309  T
Q  155 gtgatc 160  Q
    ||||||    
T  15214308 gtgatc 15214303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 12190044 - 12189981
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  12190044 gtaacacgggctttacctaacaattgttcaaatgttactaaatttaattagtaatatttttctt 12189981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 13208704 - 13208586
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt--aagtgttactaaaggtc 142  Q
    |||||| ||| ||||||||||||| |||||| || ||||||||| ||| ||||| |||||||||| |  | ||||||||||  |||| ||||||||  ||    
T  13208704 gtaacacgggttttacctaacaatggttcaagtggtactaaatttaattagtaacatttttcttaatttaattacaattttcaaagtattactaaatatc 13208605  T
Q  143 attattgtagtagtgatca 161  Q
    || ||||||||||||||||    
T  13208604 atcattgtagtagtgatca 13208586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 16222870 - 16222763
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaaggtca 143  Q
    |||||| ||| |||||||||||||| ||||| ||||||||||||  || ||||| |||||||||  |  |||||||||||| || |||||||||| ||||    
T  16222870 gtaacacgggctttacctaacaattattcaagtgttactaaattttattagtaacatttttcttgatttagttacaattttcaaatgttactaaatgtca 16222771  T
Q  144 ttattgta 151  Q
    ||||||||    
T  16222770 ttattgta 16222763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 5911683 - 5911764
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttacta 136  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||||||||  |  ||||| |||||| |||||||||||    
T  5911683 tttacctaacaattgttcaagtgttactaaatttaatcagtaacatttttcttgatttagttaaaattttcaagtgttacta 5911764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 18308270 - 18308177
Alignment:
Q  15 aatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||||||| |||||||||||||| ||||||  || ||||||||||||||||  |||||||| ||| |  |||| |||| |||||||||    
T  18308270 aatactataaaatgtaactaaagcccttcagtaacacaggctttacctaacaattgtagaaatgttaataattgtaatctgtaacatttttctt 18308177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 51758879 - 51758738
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||||||||||| ||||||| | |||  |||| | | | ||||||||| |||||||| | |||| ||||||| ||| | ||| |||||||||      
T  51758879 agataatactataaaatgtaactaaaactctttagtaatacgagctttacctaataattgttcgagtgttgctaaatttaattactaacatttttcttga 51758780  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgta 151  Q
    |  |||||||||||| || |||||||||| ||||||||||||    
T  51758779 tttagttacaattttcaaatgttactaaatgtcattattgta 51758738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 28637031 - 28636915
Alignment:
Q  9 gtagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||| |||||||||||| ||||||| | |||  | ||||  |  |||||||||||||| |||||||||||||||||| ||| ||||| |||||||||    
T  28637031 gtagatattactataaaatgtaactaaatctctttagcaacagtgactttacctaacaattattcaaatgttactaaattgaattagtaacatttttctt 28636932  T
Q  109 attccagttacaatttt 125  Q
      |  ||||||||||||    
T  28636931 gatttagttacaatttt 28636915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 3399703 - 3399653
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttc 106  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  3399703 tttacctaacaattgttcaaatgttactaaatttaattagtaacatttttc 3399653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 897535 - 897484
Alignment:
Q  57 ttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||||||||| |||||||||||| ||| || || |||||||||    
T  897535 ttacctaacaattgttcaattgttactaaatttaattaggaacatttttctt 897484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 15204675 - 15204643
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaatt 88  Q
    |||||||||||||||||||| ||||||||||||    
T  15204675 tttacctaacaattgttcaagtgttactaaatt 15204643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 9e-32; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 17037669 - 17037520
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||||||||||| ||||||| | |||  ||||||  |  ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||      
T  17037669 agataatactataaaatgtaactaaaactctttagtaacactgactttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttga 17037570  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtgat 159  Q
    |  |||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  17037569 tttagttacgattttcaagtgttactaaatgtcattattgtagtagtgat 17037520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 5079038 - 5079185
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  5079038 agatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 5079137  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  5079138 tttagttacaattttcaagtgttactaattgtcattattgtagtagtg 5079185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 31068971 - 31069083
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaaggtca 143  Q
    |||||| ||| |||||||||||||||||||| |||||||||||| ||| ||||| |||||||||  |  |||||||||||| ||||||||||||| ||||    
T  31068971 gtaacacgggctttacctaacaattgttcaa-tgttactaaatttaattagtaacatttttcttgatttagttacaatttttaagtgttactaaatgtca 31069069  T
Q  144 ttattgtagtagtg 157  Q
    ||||||||||||||    
T  31069070 ttattgtagtagtg 31069083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 7410944 - 7410803
Alignment:
Q  17 tactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagt 116  Q
    |||||||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| |||| ||||||| ||| ||||| |||||| ||  |  |||    
T  7410944 tactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacattttttttgatttagt 7410845  T
Q  117 tacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    ||||||||| || |||||||||  ||||||||||||||||||    
T  7410844 tacaattttgaaatgttactaattgtcattattgtagtagtg 7410803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 9354397 - 9354491
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaa 138  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| ||| ||||| |||||||||  | ||||||||||||| || ||||||||||    
T  9354397 gtaacatgggctttacctaacaattgctcaaatgttattaaatttaattagtaacatttttcttgattcagttacaattttcaattgttactaaa 9354491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 12042196 - 12042265
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt 125  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||  |  ||||||||||||    
T  12042196 tttacctaacaattgttcaaatgttactaaattgaatcagtaacatttttcttgatttagttacaatttt 12042265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 30786348 - 30786267
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttacta 136  Q
    |||||||||||||| |||||||||||||||||| ||||||||| |||||||||  |  |||||||||||| |||||||||||    
T  30786348 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 30786267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 23679565 - 23679420
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattc 112  Q
    |||||||||||||||| ||||||| | |||  |||||| |   |||| |||| |||||||| |||||| | ||||| ||| | ||| |||||||||  |     
T  23679565 ataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaattaataacatttttcttgatt 23679466  T
Q  113 cagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
     |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  23679465 tagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 23679420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 23855246 - 23855391
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattc 112  Q
    |||||||||||||||| ||||||| | |||  |||||| |   |||| |||| |||||||| |||||| | ||||| ||| | ||| |||||||||  |     
T  23855246 ataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaattaataacatttttcttgatt 23855345  T
Q  113 cagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
     |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  23855346 tagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 23855391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 19985119 - 19985028
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttt 104  Q
    |||||||||||||||| ||||||| | |||  ||||| |||  |||||||||||||| |||||||||||||||||  ||| ||||| |||||    
T  19985119 ataatactataaaatgtaactaaaactctttagtaacctggactttacctaacaattattcaaatgttactaaatctaattagtaacatttt 19985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 9333580 - 9333632
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||    
T  9333580 tttacctaacaattgctcaaatgttactaaatttaattagtaacatttttctt 9333632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 31571158 - 31571029
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttc----aaatgttactaaattcaatcagtaaaatttttct 107  Q
    |||||||||||| |||| | ||||||| |||  |||||||||| |||||||||||||||| |    | |||||||||| || ||||||||| ||||||||    
T  31571158 gataatactatataatggatctaaagctctttagtaacatgggttttacctaacaattgtacatatatatgttactaattttaatcagtaacatttttct 31571059  T
Q  108 tattccagttacaatttt-aagtgttacta 136  Q
    | ||  | | |||||||| |||||||||||    
T  31571058 tgttttaataacaattttcaagtgttacta 31571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 42076139 - 42076086
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaa 98  Q
    |||||||||  |||| |||||||||||||||||||||||||||| ||| |||||    
T  42076139 gtaacatggactttatctaacaattgttcaaatgttactaaatttaattagtaa 42076086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 10869516 - 10869476
Alignment:
Q  58 tacctaacaattgttcaaatgttactaaattcaatcagtaa 98  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  10869516 tacctaacaattgttcaaatgttactaaatttaattagtaa 10869476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 40402028 - 40402080
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||||||||||| || |||||||| ||| ||||| |||||||||    
T  40402028 tttacctaacaattgttcaaacgtaactaaatttaattagtaacatttttctt 40402080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 37233111 - 37233061
Alignment:
Q  58 tacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||| ||||||||||||||||| ||| |||||  ||||||||    
T  37233111 tacctaacaattgctcaaatgttactaaatttaattagtaacttttttctt 37233061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 18191886 - 18191951
Alignment:
Q  74 aaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaa 138  Q
    ||||||||||||||| ||| ||||| |||||||||| |  |||||||||||| || ||||||||||    
T  18191886 aaatgttactaaatttaattagtaacatttttcttaatttagttacaattttcaattgttactaaa 18191951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 26608512 - 26608610
Alignment:
Q  10 tagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||| |||||||||||||||||||||| |||  |||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26608512 tagatagtactataaaatgcaactaaagctctttagtaacatgggctttatctaacaattgttcaaatgttactaaatttaatcagtaacatttttctt 26608610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 158
Target Start/End: Original strand, 9242457 - 9242606
Alignment:
Q  10 tagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctta 109  Q
    ||||||||||||||||||| ||||||| | |||  |||||||||  |||| ||||||||||||||| |||||| ||||| ||| ||||| | |||||||     
T  9242457 tagataatactataaaatgtaactaaaactctttagtaacatggactttatctaacaattgttcaagtgttacaaaatttaattagtaacaattttcttg 9242556  T
Q  110 ttccagttacaatttt-aagtgttactaaaggtcattattgtagtagtga 158  Q
     |  |||||||||||| ||||||| ||||| |||||||||||||||||||    
T  9242557 atttagttacaattttcaagtgttgctaaatgtcattattgtagtagtga 9242606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 30089859 - 30089764
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||||||||| ||||||||| |||  |||||||||| ||| ||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  30089859 ataatactataaaatgtaactaaagctctttagtaacatgggcttttcctaacaattgttcaaatgttactaaatataatcagtaacatttttctt 30089764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 26621065 - 26621191
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||||||||||| ||||||||| |||  |||||||||  |||| |||||||||||| ||||||| ||||||| ||||||||| ||||||||||     
T  26621065 agataatactataaaatgtaactaaagctctttagtaacatggcttttatctaacaattgtttaaatgttgctaaatttaatcagtaacatttttcttaa 26621164  T
Q  111 tccagttacaatttt-aagtgttacta 136  Q
    |  ||| |||||||| |||||||||||    
T  26621165 tttagtaacaattttcaagtgttacta 26621191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 4685377 - 4685524
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||| | ||| |||||||||||||||||||| |||| ||||||| ||| | ||| |||||||||      
T  4685377 agatagtactataaaatgtaactaaaacactttagtaatacgggctttacctaacaattgttcaagtgttgctaaatttaattactaacatttttcttga 4685476  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||||||||  | ||||||||||||||||    
T  4685477 tttagttacaattttcaagtgttactaattgccattattgtagtagtg 4685524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 26224961 - 26225099
Alignment:
Q  20 tataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttac 119  Q
    ||||||||| ||||||| | |||  ||||||  || ||||||||| |||||||||| |||||||||||| ||| ||||  |||||||||  |  ||||||    
T  26224961 tataaaatgaaactaaaactctttagtaacaccggctttacctaataattgttcaagtgttactaaatttaattagtatcatttttcttgatttagttac 26225060  T
Q  120 aatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |||||| |||||||| |||| ||||||||||||||||||    
T  26225061 aattttcaagtgttattaaatgtcattattgtagtagtg 26225099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 26619080 - 26619202
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattc 112  Q
    |||||||||| ||||| ||||||||  |||  ||||||| || |||||||| ||||||||||||||||| |||||| ||||||||| |||||||||  |     
T  26619080 ataatactatcaaatgtaactaaagttctttagtaacataggatttaccta-caattgttcaaatgttaataaatttaatcagtaacatttttcttgatt 26619178  T
Q  113 cagttacaattttaagtgttacta 136  Q
     ||| ||||||| |||||||||||    
T  26619179 tagtaacaatttcaagtgttacta 26619202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 20277334 - 20277428
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaattttt 105  Q
    ||||||||||||| |||| ||||||||| |||  |||||| | | ||||||||||||||||| ||||||||||||||| ||| | ||| ||||||    
T  20277334 agataatactatataatgtaactaaagctctttagtaacaggtgctttacctaacaattgtttaaatgttactaaatttaattaataatattttt 20277428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 26205434 - 26205536
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaaggtcattattgtagta 154  Q
    |||||||| ||||| ||||| |||||||||||| ||| ||||| |||||||||  |  ||||| |||||| |||||| |||||| |||||||||||||||    
T  26205434 tttacctaccaatttttcaagtgttactaaatttaattagtaacatttttcttgatttagttataattttcaagtgtcactaaatgtcattattgtagta 26205533  T
Q  155 gtg 157  Q
    |||    
T  26205534 gtg 26205536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 16086611 - 16086526
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaa 98  Q
    ||||||||||||||||  ||| ||||  ||  |||||||| | |||||||||||||| ||||||||||| |||||| ||| |||||    
T  16086611 ataatactataaaatgttactgaagctattaagtaacatgagctttacctaacaattattcaaatgttattaaatttaattagtaa 16086526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 10022250 - 10022103
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaa-aatttttctta 109  Q
    ||||| || ||||||||| |||||||   |||  |||||| | | |||||||||||||||||||  |||||||||| | ||| ||||| | ||||||| |    
T  10022250 agatagtaatataaaatgtaactaaaattctttagtaacacgagctttacctaacaattgttcatgtgttactaaacttaattagtaacattttttctga 10022151  T
Q  110 ttccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    ||  |||||||||||| || |||||||||| ||||||||| ||| ||||    
T  10022150 tt-tagttacaattttcaattgttactaaatgtcattattttagcagtg 10022103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 8241688 - 8241630
Alignment:
Q  46 taacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttt 104  Q
    ||||||||  |||| ||||||| ||||||||| ||| |||||||||||||||| |||||    
T  8241688 taacatggattttatctaacaactgttcaaatattattaaattcaatcagtaacatttt 8241630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 3374374 - 3374330
Alignment:
Q  64 acaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  3374374 acaattgttcaaatgttacttaatttaatcaataacatttttctt 3374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 47066009 - 47066155
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttatt 111  Q
    |||| |||||||||||| ||||||| | ||| ||||||| ||| |||||||||||||||||||  |||||||||||| ||| | ||| |||||||||  |    
T  47066009 gatagtactataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgttcaggtgttactaaatttaattactaacatttttcttgat 47066108  T
Q  112 ccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
      |||||||||||| ||||||||||||| ||||||||||||||||||    
T  47066109 ttagttacaattttcaagtgttactaaatgtcattattgtagtagtg 47066155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 53300476 - 53300330
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttatt 111  Q
    |||| ||| |||||||| ||||||| | ||| ||||||| ||| ||||||||||||||||| |  |||||||||||| ||| | ||| |||||||||  |    
T  53300476 gatagtacgataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgtttaggtgttactaaatttaattactaacatttttcttgat 53300377  T
Q  112 ccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
      | |||||||||| ||||||||||||| ||||||||||||||||||    
T  53300376 ttaattacaattttcaagtgttactaaatgtcattattgtagtagtg 53300330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 43600393 - 43600244
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| | || ||||||| ||| ||||| |||||||||      
T  43600393 agatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagttttgctaaatttaattagtaacatttttcttga 43600294  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtgat 159  Q
    |  |||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  43600293 tttagttacaattttcaagtgttaccaattgccattattgtagtagtgat 43600244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 1152170 - 1152021
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||| |||||| || ||||||| | |||  |||||| ||  |||| ||||||||||||  | |||| | ||||| ||| ||||| ||||||||||     
T  1152170 agataatattataaactgtaactaaaactctttagtaacacggactttatctaacaattgtttgagtgttgcaaaatttaattagtaacatttttcttaa 1152071  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtgat 159  Q
    |  |||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  1152070 tttagttacaattttcaagtgttgctaaatgtcattattgtagtagtgat 1152021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 1684926 - 1685074
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||||||||||||| || ||||||| | |||  |||||| ||  |||| ||||||||||||| | |||| | ||||| ||| ||||| |||||||||      
T  1684926 agataatactataaattgtaactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttga 1685025  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtga 158  Q
    |  |||||||||||| ||||||| ||||| ||||||||| |||||||||    
T  1685026 tttagttacaattttcaagtgttgctaaatgtcattattatagtagtga 1685074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 4904125 - 4904209
Alignment:
Q  22 taaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttc 106  Q
    ||||||| ||||||||| |||  |||||| | | |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  4904125 taaaatgtaactaaagcactttagtaacaagtgctttacctaacaattgtacaaatgttactaaatttaatcagtaacatttttc 4904209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 4881054 - 4881140
Alignment:
Q  22 taaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||||||| |||  |||||| ||  |||||||||||||| | ||||| |||||||||| ||||||||| |||||||||    
T  4881054 taaaatgcaactaaagcactttagtaacacggactttacctaacaattatacaaatattactaaatttaatcagtaacatttttctt 4881140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 27739749 - 27739807
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaatt 69  Q
    |||||||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||    
T  27739749 agataatactataaaatgtaactaaagctcttcagtaacatgggctttacctaacaatt 27739807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 24559015 - 24559066
Alignment:
Q  57 ttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||||| ||||||||||||||||||| ||| ||||| |||||||||    
T  24559015 ttacctaacaatcgttcaaatgttactaaatttaattagtaacatttttctt 24559066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 48464118 - 48464072
Alignment:
Q  59 acctaacaattgttcaaatgttactaaattcaatcagtaaaattttt 105  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  48464118 acctaacaattgttcaaatgttactaaatttaattagtaacattttt 48464072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 21539247 - 21539338
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttt 104  Q
    |||||||||| |||||| ||||||| | |||  |||||| ||  || | |||||||||||| ||||||||||||||| ||||||||| |||||    
T  21539247 gataatactaaaaaatgtaactaaatctctttagtaacaaggactt-atctaacaattgtttaaatgttactaaatttaatcagtaacatttt 21539338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 37750963 - 37751058
Alignment:
Q  10 tagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaattttt 105  Q
    ||||||||||||||||||| |||||||||   |  ||||||| || |||| ||||||||||  ||||||||||| | || ||| ||||| ||||||    
T  37750963 tagataatactataaaatgtaactaaagcttcttagtaacattggctttatctaacaattgcgcaaatgttactgattttaattagtaacattttt 37751058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 21317519 - 21317487
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaatt 88  Q
    ||||||||||||||||| |||||||||||||||    
T  21317519 tttacctaacaattgttgaaatgttactaaatt 21317487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 30267128 - 30266982
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttatt 111  Q
    |||| |||||||||||| ||||||| | ||| ||||||| ||| |||||||||||||||||||  |||||||||||| ||| | ||| |||||||||  |    
T  30267128 gatagtactataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgttcaggtgttactaaatttaattactaacatttttcttgat 30267029  T
Q  112 ccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
      |||||||||||| ||||||||||||| ||||||||||||||||||    
T  30267028 ttagttacaattttcaagtgttactaaatgtcattattgtagtagtg 30266982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 44921082 - 44920939
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttatt 111  Q
    |||| |||||||||||| ||||||| | |||  |||||| | | ||||||||||||||||| |  |||||||||||| ||| ||||| |||||| | |||    
T  44921082 gatagtactataaaatgtaactaaaactctttagtaacacgagctttacctaacaattgtttaggtgttactaaatttaattagtaacatttttttgatt 44920983  T
Q  112 ccagttacaatttt-aagtgttactaaaggtcattattgtagtag 155  Q
      |||||||||||| ||||||||||||| ||||||||||||||||    
T  44920982 -tagttacaattttcaagtgttactaaatgtcattattgtagtag 44920939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 31342690 - 31342817
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| |||| ||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  31342690 agatagtactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 31342789  T
Q  111 tccagttacaatttt-aagtgttactaa 137  Q
    |  |||||||||||| ||||||||||||    
T  31342790 tttagttacaattttcaagtgttactaa 31342817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 24479279 - 24479191
Alignment:
Q  10 tagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaa 98  Q
    ||||||||||||||||||  ||||||||| |||  |||||| | | ||||||||| ||||||||||||||||||||||| ||| |||||    
T  24479279 tagataatactataaaatataactaaagctctttagtaacacgagctttacctaagaattgttcaaatgttactaaatttaattagtaa 24479191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 7702555 - 7702481
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaa 85  Q
    ||||||||||| |||||| ||||||||| |||  |||| ||||| |||||||||||||||| |||||||||||||    
T  7702555 agataatactacaaaatgtaactaaagctctttagtaatatgggctttacctaacaattgtacaaatgttactaa 7702481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 41573485 - 41573422
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||| ||||||||||||||||||||| || |||||||||||| ||| ||||| |||||||||    
T  41573485 gtaacacggggtttacctaacaattgtttaactgttactaaatttaattagtaacatttttctt 41573422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 22966651 - 22966574
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaatt 88  Q
    |||||||||| ||||||| ||||||||  |||  |||||| ||| ||||||||||||||||| |||||| ||||||||    
T  22966651 agataatactctaaaatgtaactaaaggtctttagtaacaggggctttacctaacaattgtttaaatgtaactaaatt 22966574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 40016672 - 40016624
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttt 104  Q
    |||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  40016672 tttacctaacaattattcaaatgttactaaatttaatcagtaacatttt 40016624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 7718310 - 7718183
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttatt 111  Q
    |||| |||||||||||| || |||| | |||  |||||| ||  |||| ||||||||||||||  |||||||||||| ||| ||||| |||||||||  |    
T  7718310 gatagtactataaaatgtaattaaaactctttagtaacacggactttatctaacaattgttcatgtgttactaaatttaattagtaatatttttcttgat 7718211  T
Q  112 ccagttacaatttt-aagtgttactaaa 138  Q
      |||||||||||| |||| ||||||||    
T  7718210 ttagttacaattttcaagtattactaaa 7718183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 15513793 - 15513696
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||| |||||||||||| ||||||| |  ||  |||||| | | |||||||||||||||||||| |||||| ||||| ||  ||||| |||||||||    
T  15513793 agatagtactataaaatgtaactaaatctttttagtaacacgagctttacctaacaattgttcaagtgttacaaaatttaactagtaacatttttctt 15513696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 11017538 - 11017486
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||| | |||||||    
T  11017538 tttacctaacaattggtcaaatgttactaaatttaattagtaacaattttctt 11017486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 16734931 - 16734784
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| ||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||      
T  16734931 agatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaaatgttgctaaatttaattagtaacatttttcttga 16734832  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||||||||  | ||||||||||||||||    
T  16734831 tttagttacaattttcaagtgttactaattgccattattgtagtagtg 16734784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 6684220 - 6684072
Alignment:
Q  10 tagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctta 109  Q
    ||||||||||||||||||| ||||||| | |||  |||||||||  |||||||||||| ||||| | |||||||||||| ||| ||||| |||||||||     
T  6684220 tagataatactataaaatgtaactaaaactctttagtaacatggactttacctaacaa-tgttcgagtgttactaaatttaattagtaacatttttcttg 6684122  T
Q  110 ttccagttacaa-ttttaagtgttactaaaggtcattattgtagtagtga 158  Q
     |  |||||||| ||||||||||||||||| | |||||||||||||||||    
T  6684121 attaagttacaatttttaagtgttactaaatgccattattgtagtagtga 6684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 11936741 - 11936888
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| |||| ||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  11936741 agatagtactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 11936840  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||||||||  | ||||||||||||||||    
T  11936841 tttagttacaattttcaagtgttactaattgccattattgtagtagtg 11936888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 12591959 - 12591820
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||||||||||||| || ||||||| | |||  |||||| ||| |||||||||||||||||| |  ||||||||||| ||| | ||| |||||||||      
T  12591959 agataatactataaattgtaactaaaactctttagtaacacgggctttacctaacaattgttcgagcgttactaaatttaattactaacatttttcttga 12591860  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattg 149  Q
    |  |||||||||||| ||||||||||||| ||||||||||    
T  12591859 tttagttacaattttcaagtgttactaaatgtcattattg 12591820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 14669322 - 14669467
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattc 112  Q
    |||||||||||||||| ||||||| | |||  |||||| ||  |||||||||||||| ||| | |||| | ||||| ||| ||||| |||||||||  |     
T  14669322 ataatactataaaatgtaactaaaactctttagtaacacggactttacctaacaattattcgagtgttgcaaaatttaattagtaacatttttcttgatt 14669421  T
Q  113 cagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
     |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  14669422 tagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 14669467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 15361841 - 15361694
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| |  ||  ||||||  || |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  15361841 agatagtactataaaatgtaactaaaacattttagtaacaccggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 15361742  T
Q  111 tccagttacaa-ttttaagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||| ||||||||||||||||    ||||||||||||||||    
T  15361741 tttagttacaatttttaagtgttactaattaccattattgtagtagtg 15361694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 17719697 - 17719844
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||||||||||||| || ||||||| | |||  |||||| ||  |||| ||||||||||||| | |||| | ||| | ||| ||||| |||||||||      
T  17719697 agataatactataaattgtaactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaaattaattagtaacatttttcttga 17719796  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  17719797 tttagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 17719844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 11948721 - 11948835
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| |||| ||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  11948721 agatagtactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 11948820  T
Q  111 tccagttacaatttt 125  Q
    |  ||||||||||||    
T  11948821 tttagttacaatttt 11948835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 29667934 - 29667986
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  29667934 tttacctaacaattgttcaaatgttactaaatttaattagtaacatttttctt 29667986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 15690529 - 15690416
Alignment:
Q  46 taacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt-aagtgttactaaaggtcat 144  Q
    ||||||||  |||| ||||||||||||  | ||| |||||||| ||| ||||| |||||||||  |  |||||||||||| || |||||||||| ||| |    
T  15690529 taacatggactttagctaacaattgtttgagtgtcactaaatttaattagtaacatttttcttgatttagttacaattttcaaatgttactaaatgtctt 15690430  T
Q  145 tattgtagtagtga 158  Q
    ||||||||| ||||    
T  15690429 tattgtagtggtga 15690416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 23904327 - 23904403
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaatt 88  Q
    ||||||||||||||| || || |||| | |||  |||| | ||| |||||||||||||||||||||||||||||||||    
T  23904327 agataatactataaagtgtaa-taaacctcttttgtaagaggggctttacctaacaattgttcaaatgttactaaatt 23904403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 23264515 - 23264567
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||||||||||| |||||||||||||| ||| ||||| | |||||||    
T  23264515 tttacctaacaattgttcgaatgttactaaatttaattagtaacaattttctt 23264567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 9631178 - 9631206
Alignment:
Q  60 cctaacaattgttcaaatgttactaaatt 88  Q
    |||||||||||||||||||||||||||||    
T  9631178 cctaacaattgttcaaatgttactaaatt 9631206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 1e-27; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 25638932 - 25638786
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttatt 111  Q
    |||| |||||||||||| ||||||| | |||  |||||||||| |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||  |    
T  25638932 gatagtactataaaatgtaactaaaacactttagtaacatgggttttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 25638833  T
Q  112 ccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
      |||||||||||| ||||||||||||  | ||||||||||||||||    
T  25638832 ttagttacaattttcaagtgttactaattgccattattgtagtagtg 25638786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 25637768 - 25637623
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattc 112  Q
    |||||||||||||||| |||||||   |||  |||||| ||| |||||||||||||||||| | |||| ||||||| ||| ||||| | |||||||| |     
T  25637768 ataatactataaaatgtaactaaaattctttagtaacacgggctttacctaacaattgttcgagtgttgctaaatttaattagtaacagttttcttaatt 25637669  T
Q  113 cagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
     |||||||||||| ||||||||||||| ||||||||||||||||||    
T  25637668 tagttacaattttcaagtgttactaaatgtcattattgtagtagtg 25637623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 28249055 - 28249197
Alignment:
Q  17 tactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagt 116  Q
    |||||||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||  |  |||    
T  28249055 tactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagt 28249154  T
Q  117 tacaatttt-aagtgttactaaaggtcattattgtagtagtga 158  Q
    ||||||||| ||||||||||||  | |||||||||||||||||    
T  28249155 tacaattttcaagtgttactaagtgccattattgtagtagtga 28249197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 45356086 - 45356235
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  45356086 agatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 45356185  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtgat 159  Q
    |  |||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  45356186 tttagttacaattttcaagtgttaccaattgccattattgtagtagtgat 45356235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 5650918 - 5651016
Alignment:
Q  10 tagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||| ||||||||||||||||||  ||  |||||| ||| ||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||    
T  5650918 tagataataccataaaatgcaactaaagcttttttgtaacaagggttttacctaacaattgttcaaatgttgctaaattgaattagtaacatttttctt 5651016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 19369884 - 19370032
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||||||||||| ||||||| | |||  |||||| ||  |||| ||||||||||||| | |||| | ||||| ||| ||||| |||||||||      
T  19369884 agataatactataaaatgtaactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttga 19369983  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtga 158  Q
    |  |||||||||||| ||||||| ||||| |||||||||||||||||||    
T  19369984 tttagttacaattttcaagtgttgctaaatgtcattattgtagtagtga 19370032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 17634445 - 17634592
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| |||||||   |||  |||||| ||| |||||||| ||||||||||| ||||| |||||| ||| ||||| |||||||||      
T  17634445 agatagtactataaaatgtaactaaatttctttagtaacacgggctttacctatcaattgttcaagtgttattaaatttaattagtaacatttttcttga 17634544  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| || |||||||||| ||||||||||||| ||||    
T  17634545 tttagttacaattttcaaatgttactaaatgtcattattgtaggagtg 17634592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 5528869 - 5528722
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||| ||||||| ||||||| | |||  ||||||  |  |||| ||||||||||||  | |||| ||||||| ||| ||||| |||||||||      
T  5528869 agataatactgtaaaatgtaactaaaactctttagtaacacagactttatctaacaattgtttgagtgttgctaaatttaattagtaacatttttcttga 5528770  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||||||||| ||||||||||||||||||    
T  5528769 tttagttacaattttcaagtgttactaaatgtcattattgtagtagtg 5528722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 19448574 - 19448427
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||||||||||  ||||||| | |||  |||||| ||  |||| ||||||||||||| | |||| | ||||| ||| ||||| |||||||||      
T  19448574 agataatactataaaatataactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttga 19448475  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  19448474 tttagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 19448427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 19532502 - 19532649
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||||||||||  ||||||| | |||  |||||| ||  |||| ||||||||||||| | |||| | ||||| ||| ||||| |||||||||      
T  19532502 agataatactataaaatataactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttga 19532601  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  19532602 tttagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 19532649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 14997744 - 14997650
Alignment:
Q  14 taatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||| | ||||||||| |||  |||||||||| |||||||||||||| | ||||||||||||| || || |||||| |||||||||    
T  14997744 taatactataaaaggtaactaaagctctttagtaacatgggttttacctaacaattctacaaatgttactaattttaaccagtaacatttttctt 14997650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 6801807 - 6801898
Alignment:
Q  14 taatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaattttt 105  Q
    ||||||| ||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| |||||||||||| ||| ||||| ||||||    
T  6801807 taatactctaaaatgtaactaaaactctttagtaacaggggctttacctaacaattgttcaactgttactaaatttaattagtaacattttt 6801898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 6403684 - 6403591
Alignment:
Q  46 taacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttac-aattttaagtgttactaaa 138  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||| |  |||||| ||||| || ||||||||||    
T  6403684 taacacgggctttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttaatttagttacaaatttcaattgttactaaa 6403591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 18767041 - 18766896
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattc 112  Q
    |||||||||||||||| ||||||| | |||  |||||| |   |||||||||||||||||  | |||| | ||||| ||| | ||| |||||||||  |     
T  18767041 ataatactataaaatgtaactaaaactctttagtaacacgtactttacctaacaattgtttgagtgttgcaaaatttaattaataatatttttcttgatt 18766942  T
Q  113 cagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
     |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  18766941 tagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 18766896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 29345512 - 29345443
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt 125  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||  |  ||||||||||||    
T  29345512 tttacctaacaattgttcaaaggttactaaatttaattagtaatatttttcttgatttagttacaatttt 29345443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 6223525 - 6223440
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaa 98  Q
    |||||| |||||| || ||||||| | |||  |||||| | | |||||||||||||| | |||||||||||||||| |||||||||    
T  6223525 ataatattataaagtgtaactaaaactctttagtaacacgcgctttacctaacaattttacaaatgttactaaatttaatcagtaa 6223440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 31347430 - 31347378
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||| |||||||||| ||||||||||||||||| ||| ||||  |||||||||    
T  31347430 tttatctaacaattgatcaaatgttactaaatttaattagtagcatttttctt 31347378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 3e-25; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 7407729 - 7407875
Alignment:
Q  12 gataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttatt 111  Q
    |||| |||||||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||  |    
T  7407729 gatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaatatttttcttgat 7407828  T
Q  112 ccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
      |||||||||||| ||||||||||||  | ||||||||||||||||    
T  7407829 ttagttacaattttcaagtgttactaattgccattattgtagtagtg 7407875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 13846118 - 13845976
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||  |||||| ||| |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  13846118 agatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 13846019  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtag 152  Q
    |  |||||||||||| ||||||| ||||| |||||||||||||    
T  13846018 tttagttacaattttcaagtgttgctaaatgtcattattgtag 13845976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 1627923 - 1628059
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattc 112  Q
    |||||||||||||||| ||||||| | |||  |||||| ||  ||||| |||||||||||||| |||||||||||| ||| ||||| |||||||||  |     
T  1627923 ataatactataaaatgtaactaaaactcttttgtaacacggactttacttaacaattgttcaagtgttactaaatttaattagtaatatttttcttgatt 1628022  T
Q  113 cagttacaatttt-aagtgttactaaaggtcattatt 148  Q
     |||||||||||| ||||||||||||| |||||||||    
T  1628023 tagttacaattttcaagtgttactaaatgtcattatt 1628059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 2550286 - 2550145
Alignment:
Q  17 tactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagt 116  Q
    |||||||||||| ||||||| | |||  ||||||  || |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||  |  |||    
T  2550286 tactataaaatgtaactaaaacactttagtaacacaggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagt 2550187  T
Q  117 tacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    ||||||||| ||||||||| ||  | ||||||||||||||||    
T  2550186 tacaattttcaagtgttaccaattgccattattgtagtagtg 2550145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 2943188 - 2943285
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||||||||||| ||||||| | |||  |||||| ||| || ||||||||||||||| |||||||||||||| ||| ||||| |||||||||    
T  2943188 agataatactataaaatgtaactaaaacactttagtaacacgggcttaacctaacaattgttcgaatgttactaaatttaattagtaacatttttctt 2943285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 1654702 - 1654555
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| | |||   |||||  || ||||| |||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  1654702 agatagtactataaaatgtaactaaaacactttaataacacaggctttacttaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 1654603  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| || |||||||||  | ||||||||||||||||    
T  1654602 tttagttacaattttcaattgttactaattgccattattgtagtagtg 1654555  T

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Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 36035413 - 36035318
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    |||||||||||||||| ||||||||| |||  |||||| | | |||||||||||||||| ||| |||||||||||| ||| ||||  |||||||||    
T  36035413 ataatactataaaatgtaactaaagctctttagtaacacgagctttacctaacaattgtacaattgttactaaatttaattagtattatttttctt 36035318  T

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Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 26707940 - 26707888
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  26707940 tttacctaacaattgttcaaatgttactaaatttaattagtaacatttttctt 26707888  T

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Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 16457350 - 16457419
Alignment:
Q  56 tttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttattccagttacaatttt 125  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||  |  ||||||||||||    
T  16457350 tttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttgatttagttacaatttt 16457419  T

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Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 9633418 - 9633510
Alignment:
Q  13 ataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaattttt 105  Q
    ||||| || ||||||| ||||||| | |||  |||||| ||| ||||||||||||||||| |||||| |||||||| ||| ||||| ||||||    
T  9633418 ataatgctctaaaatgtaactaaaactctttagtaacaggggctttacctaacaattgtttaaatgtaactaaatttaattagtaacattttt 9633510  T

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Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 5498570 - 5498507
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctt 108  Q
    ||||||| || ||||||||||||||||||| | ||||||||||| ||| ||||| |||||||||    
T  5498570 gtaacataggttttacctaacaattgttcagaagttactaaatttaattagtaacatttttctt 5498507  T

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Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 26735726 - 26735683
Alignment:
Q  45 gtaacatggggtttacctaacaattgttcaaatgttactaaatt 88  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  26735726 gtaacatggattttacctaacaattgttcaaatgttactaaatt 26735683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 35083102 - 35083025
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaatt 88  Q
    ||||||||||||||| || ||||||||| | |   ||||| ||| |||| ||||||||||||||||| ||||||||||    
T  35083102 agataatactataaattgtaactaaagctcatttctaacaagggttttatctaacaattgttcaaatattactaaatt 35083025  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 2180053 - 2179959
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaattttt 105  Q
    |||||| ||||||||||  ||||||||| |||  |||||| ||  |||||| || ||||||||||||| | ||||||| ||||| ||| ||||||    
T  2180053 agataacactataaaatataactaaagctctttagtaacagggaatttacccaagaattgttcaaatgattctaaatttaatcattaacattttt 2179959  T

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Target: scaffold0684 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 157
Target Start/End: Original strand, 720 - 868
Alignment:
Q  10 tagataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttctta 109  Q
    ||||||||||||||||||| ||||||| | |||  |||||||||  |||| ||||||||||||| | |||| | ||||| ||| ||||| | |||||||     
T  720 tagataatactataaaatgtaactaaaactctttagtaacatggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacaattttcttg 819  T
Q  110 ttccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
     |  |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  820 atttagttacaattttcaagtgttgctaaatgtcattattgtagtagtg 868  T

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Target: scaffold0576 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 6825 - 6678
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    ||||| |||||||||||| ||||||| |  ||  ||||||  || |||||||||||||||||||| |||| ||||||| ||| ||||| |||||||||      
T  6825 agatagtactataaaatgtaactaaaacattttagtaacaccggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttga 6726  T
Q  111 tccagttacaa-ttttaagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||| ||||||||||||||||    ||||||||||||||||    
T  6725 tttagttacaatttttaagtgttactaattaccattattgtagtagtg 6678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 40672 - 40819
Alignment:
Q  11 agataatactataaaatgcaactaaagcccttcggtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaaaatttttcttat 110  Q
    |||||||||||||||||| ||||||| | |||  |||||||||  |||| ||||||||||||| | |||| | ||||| ||| ||||| | |||||||      
T  40672 agataatactataaaatgtaactaaaactctttagtaacatggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacaattttcttga 40771  T
Q  111 tccagttacaatttt-aagtgttactaaaggtcattattgtagtagtg 157  Q
    |  |||||||||||| |||| || ||||| ||||||||||||||||||    
T  40772 tttagttacaattttcaagtattgctaaatgtcattattgtagtagtg 40819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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