View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16317_high_5 (Length: 350)
Name: NF16317_high_5
Description: NF16317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16317_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 24 - 321
Target Start/End: Original strand, 49007878 - 49008175
Alignment:
| Q |
24 |
tcatcagagcaagaaacaagatcgtggtgtgtgaagacaagaaccgaacacttgctactcaagtggataacttggacagaataaaagttgttgcgggtgt |
123 |
Q |
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| T |
49007878 |
tcatcagagcaagaaacaagatcgtggtgtgtgaagacaagaaccgaacacttgctactcaagtggataacttggacagaataaaagttgttgcgggtgt |
49007977 |
T |
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| Q |
124 |
tttcatatcaaatagttctgaggatataacatattacattcaaactaagtttccatctannnnnnngaatccaattaatggagaacttatcaaggatttc |
223 |
Q |
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| T |
49007978 |
tttcatatcaaatagttctgaggatataacatattacattcaaactaagtttccatctatttttttgaatccaattaatggagaacttatcaaggatttc |
49008077 |
T |
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| Q |
224 |
attaagtgcaatactaatccaaaagcaagcatgcaatttaataaaactgttttaggtacaaaaccagcaccaagtgtggatagttatagctcaagagg |
321 |
Q |
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| T |
49008078 |
attaagtgcaatactaatccaaaagcaagcatgcaatttaataaaactgttttaggtacaaaaccagcaccaagtgtggatagttatagctcaagagg |
49008175 |
T |
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