View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16322_high_19 (Length: 313)

Name: NF16322_high_19
Description: NF16322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16322_high_19
NF16322_high_19
[»] chr3 (53 HSPs)
chr3 (113-313)||(6110064-6110264)
chr3 (113-313)||(10572599-10572799)
chr3 (113-313)||(15600891-15601091)
chr3 (113-313)||(15607436-15607636)
chr3 (116-313)||(13211305-13211502)
chr3 (113-313)||(13248607-13248807)
chr3 (115-313)||(16482490-16482688)
chr3 (119-313)||(17781125-17781319)
chr3 (119-313)||(10579362-10579556)
chr3 (115-313)||(18522665-18522863)
chr3 (113-313)||(15357593-15357793)
chr3 (113-299)||(8490488-8490674)
chr3 (115-313)||(18519980-18520175)
chr3 (119-313)||(19089752-19089946)
chr3 (115-313)||(17200191-17200389)
chr3 (132-313)||(15342226-15342407)
chr3 (115-313)||(13516813-13517011)
chr3 (113-274)||(18640792-18640953)
chr3 (119-313)||(32056907-32057101)
chr3 (119-305)||(1647536-1647726)
chr3 (115-301)||(16200128-16200313)
chr3 (113-305)||(29924971-29925163)
chr3 (113-305)||(29974124-29974316)
chr3 (115-301)||(16200434-16200619)
chr3 (120-313)||(24253395-24253589)
chr3 (219-313)||(17136465-17136559)
chr3 (115-177)||(18534758-18534820)
chr3 (21-77)||(6109972-6110028)
chr3 (21-77)||(8490396-8490452)
chr3 (21-77)||(13248515-13248571)
chr3 (21-77)||(13211211-13211267)
chr3 (21-77)||(18640989-18641045)
chr3 (21-77)||(17136137-17136193)
chr3 (21-71)||(10579603-10579653)
chr3 (21-77)||(15607672-15607729)
chr3 (115-160)||(18510924-18510969)
chr3 (21-77)||(15351237-15351293)
chr3 (21-77)||(15357829-15357885)
chr3 (21-77)||(16482727-16482782)
chr3 (21-77)||(17200427-17200483)
chr3 (21-77)||(18519885-18519941)
chr3 (21-71)||(10572840-10572890)
chr3 (20-77)||(1647768-1647825)
chr3 (21-77)||(15601127-15601184)
chr3 (21-77)||(13516719-13516775)
chr3 (21-77)||(17781358-17781414)
chr3 (21-77)||(19089985-19090041)
chr3 (21-77)||(32057144-32057200)
chr3 (21-77)||(18510829-18510885)
chr3 (21-77)||(18522570-18522626)
chr3 (29-77)||(18534671-18534719)
chr3 (21-77)||(29924879-29924935)
chr3 (21-77)||(29974032-29974088)
[»] scaffold0234 (4 HSPs)
scaffold0234 (113-313)||(2328-2528)
scaffold0234 (113-313)||(11219-11419)
scaffold0234 (21-77)||(2564-2620)
scaffold0234 (21-77)||(11455-11511)
[»] chr4 (47 HSPs)
chr4 (113-313)||(19926767-19926967)
chr4 (113-313)||(26970463-26970663)
chr4 (113-313)||(55612683-55612883)
chr4 (113-313)||(868597-868797)
chr4 (113-313)||(5707320-5707520)
chr4 (113-313)||(26963640-26963840)
chr4 (115-313)||(18262214-18262412)
chr4 (113-313)||(5713948-5714148)
chr4 (113-313)||(10621340-10621540)
chr4 (113-313)||(10628419-10628619)
chr4 (115-313)||(18269070-18269273)
chr4 (115-313)||(28393141-28393339)
chr4 (115-313)||(4426611-4426808)
chr4 (125-311)||(8845215-8845401)
chr4 (125-311)||(8858179-8858365)
chr4 (113-228)||(12357136-12357251)
chr4 (121-312)||(20311299-20311491)
chr4 (119-305)||(5668140-5668327)
chr4 (119-313)||(10677562-10677753)
chr4 (119-313)||(10891202-10891393)
chr4 (115-312)||(5616215-5616414)
chr4 (119-313)||(35223576-35223760)
chr4 (17-77)||(19927003-19927063)
chr4 (21-77)||(5713856-5713912)
chr4 (21-77)||(26963548-26963604)
chr4 (21-77)||(26970371-26970427)
chr4 (21-77)||(5707228-5707284)
chr4 (21-77)||(10621576-10621632)
chr4 (21-77)||(12357044-12357100)
chr4 (23-77)||(868507-868561)
chr4 (19-77)||(17142372-17142430)
chr4 (21-77)||(10628655-10628711)
chr4 (21-77)||(55612594-55612650)
chr4 (21-75)||(28393380-28393434)
chr4 (20-77)||(4426847-4426904)
chr4 (21-77)||(18268976-18269032)
chr4 (162-229)||(39074278-39074346)
chr4 (28-77)||(55992680-55992729)
chr4 (139-305)||(21454152-21454319)
chr4 (36-77)||(5668371-5668412)
chr4 (29-77)||(8845118-8845166)
chr4 (29-77)||(8858082-8858130)
chr4 (37-77)||(18262136-18262176)
chr4 (163-222)||(11161913-11161972)
chr4 (23-77)||(20311207-20311261)
chr4 (29-77)||(24699958-24700006)
chr4 (250-302)||(39074218-39074270)
[»] chr1 (26 HSPs)
chr1 (113-313)||(18252030-18252230)
chr1 (113-313)||(18532521-18532721)
chr1 (113-313)||(27131416-27131616)
chr1 (115-313)||(21171240-21171438)
chr1 (115-313)||(27310584-27310782)
chr1 (115-313)||(16359042-16359240)
chr1 (119-305)||(36816648-36816834)
chr1 (113-313)||(3855926-3856126)
chr1 (113-305)||(22657236-22657429)
chr1 (119-313)||(27277564-27277756)
chr1 (18-77)||(18532757-18532816)
chr1 (147-305)||(12006554-12006712)
chr1 (147-312)||(12014292-12014457)
chr1 (20-77)||(18251935-18251992)
chr1 (21-77)||(27310821-27310877)
chr1 (125-311)||(9917927-9918106)
chr1 (21-77)||(16359280-16359336)
chr1 (21-77)||(21171479-21171535)
chr1 (119-188)||(30720625-30720694)
chr1 (29-74)||(36816881-36816926)
chr1 (21-77)||(3856164-3856220)
chr1 (21-73)||(22657469-22657521)
chr1 (21-77)||(27131652-27131704)
chr1 (143-220)||(3403248-3403325)
chr1 (143-220)||(3443494-3443571)
chr1 (21-77)||(27277800-27277856)
[»] scaffold0220 (2 HSPs)
scaffold0220 (113-313)||(18288-18488)
scaffold0220 (21-77)||(18196-18252)
[»] chr7 (27 HSPs)
chr7 (113-313)||(29327784-29327984)
chr7 (113-313)||(11536069-11536269)
chr7 (113-313)||(11542987-11543187)
chr7 (115-313)||(15152445-15152643)
chr7 (115-313)||(15148144-15148342)
chr7 (115-313)||(18561009-18561207)
chr7 (115-305)||(12750828-12751018)
chr7 (119-313)||(12738542-12738736)
chr7 (115-305)||(18257857-18258047)
chr7 (119-301)||(13392157-13392338)
chr7 (135-305)||(2364917-2365086)
chr7 (19-77)||(12738441-12738499)
chr7 (20-77)||(2653275-2653332)
chr7 (21-77)||(11543223-11543279)
chr7 (119-206)||(39111819-39111905)
chr7 (146-305)||(7396221-7396381)
chr7 (21-77)||(11536305-11536361)
chr7 (21-77)||(12750733-12750789)
chr7 (21-77)||(15152350-15152406)
chr7 (21-76)||(29327690-29327745)
chr7 (21-77)||(15148049-15148105)
chr7 (187-230)||(3132748-3132791)
chr7 (21-76)||(13392030-13392085)
chr7 (163-228)||(10234179-10234244)
chr7 (21-77)||(18258087-18258143)
chr7 (113-145)||(2653207-2653239)
chr7 (21-77)||(18560913-18560969)
[»] chr6 (29 HSPs)
chr6 (113-313)||(27381259-27381459)
chr6 (113-313)||(27471642-27471842)
chr6 (115-313)||(17684476-17684674)
chr6 (113-313)||(29308890-29309090)
chr6 (113-313)||(29315850-29316050)
chr6 (115-313)||(16566327-16566525)
chr6 (113-313)||(17691447-17691647)
chr6 (115-313)||(188984-189182)
chr6 (115-313)||(25537166-25537364)
chr6 (115-313)||(11651725-11651923)
chr6 (115-303)||(13359286-13359474)
chr6 (23-77)||(17691683-17691737)
chr6 (152-313)||(20553594-20553755)
chr6 (21-77)||(27381495-27381551)
chr6 (21-77)||(27471878-27471934)
chr6 (21-77)||(29308798-29308854)
chr6 (21-77)||(29315758-29315814)
chr6 (21-77)||(17684712-17684768)
chr6 (132-305)||(8509941-8510115)
chr6 (21-75)||(11651630-11651684)
chr6 (136-305)||(27925772-27925946)
chr6 (21-77)||(25537405-25537461)
chr6 (151-313)||(17850502-17850663)
chr6 (120-175)||(31258065-31258120)
chr6 (29-77)||(13359512-13359560)
chr6 (29-77)||(16566563-16566611)
chr6 (20-77)||(189221-189281)
chr6 (35-77)||(16394484-16394526)
chr6 (129-194)||(22259925-22259990)
[»] scaffold0390 (4 HSPs)
scaffold0390 (113-313)||(6941-7141)
scaffold0390 (113-313)||(13957-14157)
scaffold0390 (21-77)||(7177-7233)
scaffold0390 (21-77)||(14193-14249)
[»] chr8 (18 HSPs)
chr8 (113-313)||(21940665-21940865)
chr8 (115-313)||(28554885-28555083)
chr8 (115-313)||(22171491-22171687)
chr8 (119-312)||(6094129-6094322)
chr8 (119-313)||(24642655-24642849)
chr8 (119-246)||(24636860-24636987)
chr8 (18-77)||(22070105-22070164)
chr8 (21-77)||(21940573-21940629)
chr8 (21-77)||(6094031-6094087)
chr8 (21-77)||(22171396-22171452)
chr8 (21-73)||(24642556-24642608)
chr8 (21-77)||(28554791-28554847)
chr8 (125-313)||(38232384-38232570)
chr8 (143-304)||(32872857-32873019)
chr8 (134-192)||(2375027-2375085)
chr8 (151-214)||(10920234-10920297)
chr8 (21-74)||(2374947-2375000)
chr8 (21-58)||(24636605-24636642)
[»] chr2 (10 HSPs)
chr2 (113-309)||(21330259-21330455)
chr2 (113-313)||(18796506-18796706)
chr2 (115-311)||(18619807-18620002)
chr2 (119-258)||(19692598-19692737)
chr2 (178-305)||(20977957-20978084)
chr2 (19-77)||(21330493-21330551)
chr2 (147-313)||(36270199-36270366)
chr2 (147-305)||(18822115-18822275)
chr2 (21-77)||(19692773-19692829)
chr2 (149-304)||(36802664-36802820)
[»] scaffold0433 (2 HSPs)
scaffold0433 (113-313)||(7107-7307)
scaffold0433 (21-77)||(7015-7071)
[»] chr5 (20 HSPs)
chr5 (113-313)||(24695473-24695673)
chr5 (113-313)||(18569870-18570070)
chr5 (115-313)||(19714505-19714703)
chr5 (119-313)||(19707225-19707419)
chr5 (118-301)||(27347497-27347679)
chr5 (119-305)||(22547031-22547217)
chr5 (113-222)||(39537962-39538071)
chr5 (117-298)||(17285754-17285935)
chr5 (21-77)||(24695709-24695765)
chr5 (119-222)||(31886537-31886640)
chr5 (117-298)||(17298907-17299088)
chr5 (21-77)||(19714742-19714798)
chr5 (21-77)||(19707462-19707518)
chr5 (21-77)||(27347722-27347778)
chr5 (179-313)||(18807041-18807175)
chr5 (226-313)||(39538701-39538788)
chr5 (139-229)||(33477389-33477479)
chr5 (29-77)||(18570108-18570156)
chr5 (21-76)||(39537870-39537925)
chr5 (163-231)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (113-313)||(993-1193)
scaffold0657 (20-77)||(900-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (113-313)||(25997-26197)
scaffold0186 (21-76)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (115-313)||(5531-5729)
scaffold0063 (29-77)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (115-296)||(230365-230545)
scaffold0008 (21-77)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (113-177)||(8446-8510)
scaffold0176 (21-77)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (21-77)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (21-77)||(16523-16579)
scaffold0326 (113-146)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (21-77)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (21-77)||(8944-9000)
[»] scaffold0565 (2 HSPs)
scaffold0565 (23-77)||(10202-10256)
scaffold0565 (132-163)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (21-57)||(1-37)
[»] scaffold0170 (1 HSPs)
scaffold0170 (21-73)||(5878-5930)
[»] scaffold0032 (1 HSPs)
scaffold0032 (142-214)||(92194-92267)


Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 6110064 - 6110264
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  313 c 313  Q
    |    
T  6110264 c 6110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 10572799 - 10572599
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  313 c 313  Q
    |    
T  10572599 c 10572599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 15601091 - 15600891
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  313 c 313  Q
    |    
T  15600891 c 15600891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 15607636 - 15607436
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  313 c 313  Q
    |    
T  15607436 c 15607436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 116 - 313
Target Start/End: Original strand, 13211305 - 13211502
Alignment:
Q  116 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  216 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 13211502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 13248607 - 13248807
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  313 c 313  Q
    |    
T  13248807 c 13248807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 16482688 - 16482490
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 17781319 - 17781125
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17781125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 10579556 - 10579362
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 10579362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 18522665 - 18522863
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagac 18522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 15357793 - 15357593
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  313 c 313  Q
    |    
T  15357593 c 15357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 8490488 - 8490674
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 299  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 18519980 - 18520175
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18520175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 19089946 - 19089752
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagac 19089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 17200389 - 17200191
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagac 17200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 132 - 313
Target Start/End: Complemental strand, 15342407 - 15342226
Alignment:
Q  132 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 231  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  232 aactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagac 15342226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 13516813 - 13517011
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagac 13517011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 113 - 274
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 32057101 - 32056907
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||| ||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 32056907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 119 - 305
Target Start/End: Complemental strand, 1647726 - 1647536
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagta----taacttaattgtgagac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    ||| |||||||||||||||||||| | |||||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgt 1647536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 115 - 301
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 301  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 113 - 305
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 113 - 305
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 115 - 301
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 301  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||| ||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 120 - 313
Target Start/End: Complemental strand, 24253589 - 24253395
Alignment:
Q  120 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-cccca 218  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    | ||||||||||| |||||||| |||||||  || |||||  ||| |||  ||||| | || ||||||||||||||||||||||||| |||||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagac 24253395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 17136465 - 17136559
Alignment:
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagac 17136559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 10579653 - 10579603
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgt 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  21 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 17200483 - 17200427
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 10572890 - 10572840
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgt 71  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 1647825 - 1647768
Alignment:
Q  20 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1647825 atgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  21 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 17781414 - 17781358
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 19090041 - 19089985
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 2528 - 2328
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  313 c 313  Q
    |    
T  2328 c 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 11419 - 11219
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  313 c 313  Q
    |    
T  11219 c 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 19926967 - 19926767
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  313 c 313  Q
    |    
T  19926767 c 19926767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 26970463 - 26970663
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  313 c 313  Q
    |    
T  26970663 c 26970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 55612683 - 55612883
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  313 c 313  Q
    |    
T  55612883 c 55612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 868597 - 868797
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  313 c 313  Q
    |    
T  868797 c 868797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 5707320 - 5707520
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  313 c 313  Q
    |    
T  5707520 c 5707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 26963640 - 26963840
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  313 c 313  Q
    |    
T  26963840 c 26963840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 18262214 - 18262412
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 5713948 - 5714148
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  313 c 313  Q
    |    
T  5714148 c 5714148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 10621540 - 10621340
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  313 c 313  Q
    |    
T  10621340 c 10621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 10628619 - 10628419
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  313 c 313  Q
    |    
T  10628419 c 10628419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 18269070 - 18269273
Alignment:
Q  115 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 209  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  210 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  310 agac 313  Q
    ||||    
T  18269270 agac 18269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 28393339 - 28393141
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 28393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 4426808 - 4426611
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 4426611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 125 - 311
Target Start/End: Original strand, 8845215 - 8845401
Alignment:
Q  125 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  225 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 311  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 125 - 311
Target Start/End: Original strand, 8858179 - 8858365
Alignment:
Q  125 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  225 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 311  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  213 accccattaaacataa 228  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 121 - 312
Target Start/End: Original strand, 20311299 - 20311491
Alignment:
Q  121 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccat 219  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  220 taaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||| ||| || | |||||||  || |||||||||| ||| |||||| |||||||||||||||||||||||||| ||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtaga 20311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 305
Target Start/End: Complemental strand, 5668327 - 5668140
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  219 ttaaacataaggaaactattctcaaag--tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||||||| ||| |||  | |||| ||||||| |||||||||||||||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgt 5668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 10677753 - 10677562
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| |||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagac 10677562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 10891393 - 10891202
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| |||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagac 10891202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 312
Target Start/End: Original strand, 5616215 - 5616414
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||| ||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 119 - 313
Target Start/End: Original strand, 35223576 - 35223760
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||          |     
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    | ||||  ||||| | |||||| ||||||| |||||||||||||| |||  ||   ||||| |||||||||||| |||||||||||| |||||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagac 35223760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 19927063 - 19927003
Alignment:
Q  17 aatatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927063 aatatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  23 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 17142430 - 17142372
Alignment:
Q  19 tatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17142430 tatgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 75  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 4426904 - 4426847
Alignment:
Q  20 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4426904 atgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  162 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 229  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  28 ataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 305
Target Start/End: Complemental strand, 21454319 - 21454152
Alignment:
Q  139 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataaggaaactat 237  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  238 tctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    | | ||| ||||  ||||||| |||| ||| ||| || |||| || ||| ||||| ||| ||||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgt 21454152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  36 taatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  37 aatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  163 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 222  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  23 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 24699958 - 24700006
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||| |||||||||||||||||  ||||| |||||||||||    
T  24699958 taagcccgaataaccaatctatattgattgaatttggttttgtatcatg 24700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  250 cgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatta 302  Q
    ||||||||  |||| ||| |||||| |||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 18252030 - 18252230
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  313 c 313  Q
    |    
T  18252230 c 18252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 18532721 - 18532521
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  313 c 313  Q
    |    
T  18532521 c 18532521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 27131616 - 27131416
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  313 c 313  Q
    |    
T  27131416 c 27131416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 21171438 - 21171240
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 21171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 27310782 - 27310584
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagac 27310584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 16359240 - 16359042
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagac 16359042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 119 - 305
Target Start/End: Complemental strand, 36816834 - 36816648
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    ||||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgt 36816648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 3856126 - 3855926
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||| ||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  313 c 313  Q
    |    
T  3855926 c 3855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 113 - 305
Target Start/End: Complemental strand, 22657429 - 22657236
Alignment:
Q  113 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 211  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  212 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||| ||  ||| || ||||||||||||||||||||||||| ||||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgt 22657236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 27277756 - 27277564
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||| |  || || | |||||| |||||||||||||||| ||||| ||| |||  |||||| ||||||||||||||||||||||||| |||||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagac 27277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 18532816 - 18532757
Alignment:
Q  18 atatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532816 atatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 147 - 305
Target Start/End: Complemental strand, 12006712 - 12006554
Alignment:
Q  147 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 246  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  247 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    || ||||||||||| ||  || |||| |||||| ||||||| | |||||| | ||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgt 12006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 312
Target Start/End: Complemental strand, 12014457 - 12014292
Alignment:
Q  147 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 246  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  247 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||| |||||||  || |||| ||||||  |||||||| || |||| ||||||| ||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtaga 12014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 18251935 - 18251992
Alignment:
Q  20 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251935 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 311
Target Start/End: Complemental strand, 9918106 - 9917927
Alignment:
Q  125 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 224  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  225 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 311  Q
    ||||||| | |||||| ||| ||||  |||| ||||||| |||  |||||||||| |||| ||||||||||| || ||||| |||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtag 9917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 188  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatc 74  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| || |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 22657521 - 22657469
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 73  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  143 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 220  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  143 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 220  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 18288 - 18488
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  313 c 313  Q
    |    
T  18488 c 18488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 29327784 - 29327984
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  313 c 313  Q
    |    
T  29327984 c 29327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 11536269 - 11536069
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  313 c 313  Q
    |    
T  11536069 c 11536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 11543187 - 11542987
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  313 c 313  Q
    |    
T  11542987 c 11542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 15152445 - 15152643
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15152643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 15148144 - 15148342
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15148342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 18561009 - 18561207
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagac 18561207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 115 - 305
Target Start/End: Original strand, 12750828 - 12751018
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgt 12751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 119 - 313
Target Start/End: Original strand, 12738542 - 12738736
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 115 - 305
Target Start/End: Complemental strand, 18258047 - 18257857
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| ||||||||||||    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgt 18257857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 119 - 301
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 301  Q
    |||||   ||||| | |||||| ||||||||  ||||||| |||| ||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 305
Target Start/End: Original strand, 2364917 - 2365086
Alignment:
Q  135 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 234  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  235 tattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    |||||| ||| ||| ||||||||| | || ||| ||| || |||| ||||||| |||||||||||| ||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgt 2365086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 12738441 - 12738499
Alignment:
Q  19 tatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738441 tatgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 2653332 - 2653275
Alignment:
Q  20 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2653332 atgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 206  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  146 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 244  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  245 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
      ||  |||||||||| ||  || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  187 aacattaagtataacttaattgtgagaccccattaaacataagg 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 76  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  163 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 228  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 145
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  113 acaaggcatttctttattgattttgttttgttt 145  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||| | || |||||||| ||||||||| ||||||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 27381459 - 27381259
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  313 c 313  Q
    |    
T  27381259 c 27381259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 27471842 - 27471642
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  313 c 313  Q
    |    
T  27471642 c 27471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 17684674 - 17684476
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17684476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 29308890 - 29309090
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  313 c 313  Q
    |    
T  29309090 c 29309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 29315850 - 29316050
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  313 c 313  Q
    |    
T  29316050 c 29316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 16566525 - 16566327
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16566327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 17691647 - 17691447
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  313 c 313  Q
    |    
T  17691447 c 17691447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 189182 - 188984
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 188984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 25537364 - 25537166
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 25537166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 11651725 - 11651923
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 11651923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 115 - 303
Target Start/End: Complemental strand, 13359474 - 13359286
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattat 303  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||| ||| ||| ||||| | ||||||||| |||||||||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattat 13359286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  23 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 313
Target Start/End: Complemental strand, 20553755 - 20553594
Alignment:
Q  152 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 251  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  252 tagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||| ||  ||| ||| |||||| ||||  ||||||||||| ||| | |||||| |||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagac 20553594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 305
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  132 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 230  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  231 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    |   |||| | |||||||  ||||| ||||||| ||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 75  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 305
Target Start/End: Original strand, 27925772 - 27925946
Alignment:
Q  136 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 230  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  231 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    ||| |||||| ||||||||  ||||||| |||| ||  ||||||| ||| |||| ||||| | ||||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgt 27925946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 313
Target Start/End: Complemental strand, 17850663 - 17850502
Alignment:
Q  151 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 250  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  251 gtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | |||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagac 17850502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  120 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 175  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 189281 - 189221
Alignment:
Q  20 atgttggaataagccctaatagccaatcta---tattgattgggtttggctttgtatcatg 77  Q
    |||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||||||    
T  189281 atgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 16394526 - 16394484
Alignment:
Q  35 ctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||    
T  16394526 ctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  129 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 194  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 189; Significance: 1e-102; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 7141 - 6941
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  313 c 313  Q
    |    
T  6941 c 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 14157 - 13957
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  313 c 313  Q
    |    
T  13957 c 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 21940665 - 21940865
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  313 c 313  Q
    |    
T  21940865 c 21940865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 28554885 - 28555083
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 28555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 22171491 - 22171687
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagac 22171687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 119 - 312
Target Start/End: Original strand, 6094129 - 6094322
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtaga 6094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 119 - 313
Target Start/End: Original strand, 24642655 - 24642849
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagac 24642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  219 ttaaacataaggaaactattctcaaagt 246  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 22070105 - 22070164
Alignment:
Q  18 atatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22070105 atatgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 24642556 - 24642608
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 73  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 313
Target Start/End: Complemental strand, 38232570 - 38232384
Alignment:
Q  125 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 224  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  225 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
     |||  | | |||||| |||||||  |||||||| |||| |||  ||||| ||||   |||||||||| | |||||| ||| |||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagac 38232384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 304
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  143 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 241  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  242 aaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatg 304  Q
    ||| |||  ||||| ||| ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  134 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt 192  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  151 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 2374947 - 2375000
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 74  Q
    ||||||||||||||||||||   ||| | |||||||||| ||||||||||||||    
T  2374947 tgttggaataagccctaataataaatatgtattgattggatttggctttgtatc 2375000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattg 58  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 113 - 309
Target Start/End: Complemental strand, 21330455 - 21330259
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggt 21330259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 18796506 - 18796706
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  313 c 313  Q
    |    
T  18796706 c 18796706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 115 - 311
Target Start/End: Original strand, 18619807 - 18620002
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 311  Q
    ||||||||||| ||||| | |||||| |||||||| || ||||| |||| ||| |||  ||||||  ||||||||||| |||||||||||| |||||    
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtag 18620002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaa 258  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  178 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 277  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||  || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  278 tatcattaaagcatagagactattatgt 305  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 21330551 - 21330493
Alignment:
Q  19 tatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330551 tatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 313
Target Start/End: Original strand, 36270199 - 36270366
Alignment:
Q  147 aaaataataaagtccctagaatagttag-tccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 245  Q
    |||||||||||||||||||||||||||| |   || |||| ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  246 tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
     ||||||| |||||||||  || |||| |||||| |||||||| ||| |||||||| ||| |||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagac 36270366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 305
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  147 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 244  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  245 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
      ||  ||| |||||||||  |  |||||||||||||||||||||| | ||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 304
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  149 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagta 247  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   ||||||||| || || | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  248 tccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatg 304  Q
    |||||| ||||| ||   ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 181; Significance: 8e-98; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 7107 - 7307
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  313 c 313  Q
    |    
T  7307 c 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 8e-98; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 24695673 - 24695473
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  313 c 313  Q
    |    
T  24695473 c 24695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 18570070 - 18569870
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  313 c 313  Q
    |    
T  18569870 c 18569870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 19714703 - 19714505
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19714505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 119 - 313
Target Start/End: Complemental strand, 19707419 - 19707225
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 118 - 301
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  118 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 217  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  218 attaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 301  Q
    |||||||  ||||| | |||||| |||||||  ||||||||||||| ||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 119 - 305
Target Start/End: Complemental strand, 22547217 - 22547031
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 305  Q
    ||||| ||| ||| | |||| | ||||||| || |||||| |||| ||| |||||| |||| |||||||  ||||||||||||||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgt 22547031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  213 accccattaa 222  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 117 - 298
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  117 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 216  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  217 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact 298  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| ||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  119 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 218  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  219 ttaa 222  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 298
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  117 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 216  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  217 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact 298  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| |||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 18807175 - 18807041
Alignment:
Q  179 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 277  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| || ||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  278 tatcattaaagcatagagactattatgtaggtagac 313  Q
    || || |||||||||||||||||||||  |||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagac 18807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 313
Target Start/End: Original strand, 39538701 - 39538788
Alignment:
Q  226 taaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    |||||| |||||||| ||| ||||| |||| ||||||| ||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagac 39538788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  139 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 229  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 76  Q
    ||||||| |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  163 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 231  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

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Target: scaffold0657 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 993 - 1193
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  313 c 313  Q
    |    
T  1193 c 1193  T

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Target: scaffold0657; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 900 - 957
Alignment:
Q  20 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  900 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

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Target: scaffold0186 (Bit Score: 173; Significance: 5e-93; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 26197 - 25997
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  213 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  313 c 313  Q
    |    
T  25997 c 25997  T

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Target: scaffold0186; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

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Target: scaffold0063 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 5531 - 5729
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 313  Q
    ||| ||||||||||||||| |||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 5729  T

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Target: scaffold0063; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  29 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

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Target: scaffold0008 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 115 - 296
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  115 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  215 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagaga 296  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

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Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

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Target: scaffold0176 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 177  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

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Target: scaffold0203 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

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Target: scaffold0326 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  113 acaaggcatttctttattgattttgttttgtttc 146  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

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Target: scaffold0705 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  23 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 77  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  132 attttgttttgtttcaaaataataaagtccct 163  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 37 - 1
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgatt 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 5878 - 5930
Alignment:
Q  21 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 73  Q
    ||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  142 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 214  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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