View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16324_high_2 (Length: 352)

Name: NF16324_high_2
Description: NF16324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16324_high_2
NF16324_high_2
[»] chr5 (38 HSPs)
chr5 (23-233)||(36205900-36206111)
chr5 (241-342)||(36294178-36294280)
chr5 (242-327)||(18864428-18864513)
chr5 (242-341)||(12189293-12189393)
chr5 (243-338)||(40738891-40738987)
chr5 (240-338)||(4621143-4621241)
chr5 (245-338)||(6245188-6245282)
chr5 (241-327)||(10666139-10666225)
chr5 (248-343)||(7338624-7338720)
chr5 (244-335)||(31498837-31498929)
chr5 (244-338)||(31484649-31484744)
chr5 (245-327)||(37105851-37105933)
chr5 (244-336)||(43548575-43548668)
chr5 (245-327)||(15272771-15272853)
chr5 (247-335)||(37274608-37274697)
chr5 (243-327)||(8232542-8232626)
chr5 (244-335)||(42437368-42437460)
chr5 (267-341)||(31527565-31527640)
chr5 (240-338)||(37340796-37340895)
chr5 (244-327)||(41881922-41882005)
chr5 (247-327)||(18978453-18978533)
chr5 (267-341)||(4156156-4156231)
chr5 (267-341)||(9065721-9065796)
chr5 (240-327)||(18522158-18522244)
chr5 (258-338)||(13210979-13211060)
chr5 (243-319)||(6469944-6470020)
chr5 (286-341)||(33280851-33280907)
chr5 (267-341)||(13145868-13145943)
chr5 (242-341)||(19034708-19034808)
chr5 (286-341)||(24559110-24559166)
chr5 (286-341)||(24600142-24600198)
chr5 (267-319)||(25084879-25084931)
chr5 (267-319)||(25142852-25142904)
chr5 (286-341)||(37865917-37865973)
chr5 (267-341)||(43518279-43518354)
chr5 (245-327)||(10552506-10552588)
chr5 (277-344)||(27308706-27308774)
chr5 (267-315)||(38760537-38760585)
[»] chr1 (54 HSPs)
chr1 (242-341)||(7009006-7009105)
chr1 (238-344)||(24527620-24527726)
chr1 (244-338)||(29922214-29922309)
chr1 (240-338)||(40498613-40498712)
chr1 (243-338)||(51776028-51776124)
chr1 (242-338)||(17605725-17605822)
chr1 (242-338)||(51002021-51002118)
chr1 (244-338)||(13146022-13146116)
chr1 (241-338)||(26307843-26307941)
chr1 (241-344)||(3485812-3485917)
chr1 (247-338)||(41712763-41712855)
chr1 (241-335)||(9640884-9640979)
chr1 (244-338)||(35273826-35273921)
chr1 (248-338)||(23444334-23444424)
chr1 (242-328)||(32086480-32086566)
chr1 (239-338)||(12601849-12601948)
chr1 (247-338)||(19247767-19247859)
chr1 (267-341)||(20581522-20581597)
chr1 (240-315)||(32561260-32561335)
chr1 (245-327)||(17474665-17474747)
chr1 (245-338)||(19514126-19514220)
chr1 (243-335)||(8114897-8114990)
chr1 (241-341)||(33010772-33010873)
chr1 (242-341)||(42948187-42948287)
chr1 (267-341)||(2482618-2482693)
chr1 (268-338)||(5672915-5672986)
chr1 (244-327)||(6016615-6016698)
chr1 (243-341)||(13942142-13942241)
chr1 (267-341)||(24317204-24317279)
chr1 (267-341)||(28852905-28852980)
chr1 (267-341)||(39569441-39569516)
chr1 (244-341)||(18909215-18909313)
chr1 (266-327)||(14290295-14290356)
chr1 (238-315)||(48933209-48933286)
chr1 (242-341)||(15932784-15932884)
chr1 (267-341)||(6653247-6653322)
chr1 (267-341)||(34270759-34270834)
chr1 (267-341)||(40400056-40400131)
chr1 (267-341)||(44721894-44721969)
chr1 (267-341)||(52024748-52024823)
chr1 (267-341)||(52044375-52044450)
chr1 (244-336)||(46291814-46291907)
chr1 (267-319)||(11173509-11173561)
chr1 (241-317)||(14247456-14247532)
chr1 (267-319)||(39982286-39982338)
chr1 (267-338)||(50727820-50727892)
chr1 (267-319)||(51290572-51290624)
chr1 (267-322)||(13240225-13240280)
chr1 (240-341)||(26151151-26151253)
chr1 (196-229)||(16708871-16708904)
chr1 (286-319)||(40536797-40536830)
chr1 (241-341)||(51677234-51677335)
chr1 (286-341)||(2138231-2138287)
chr1 (286-341)||(35841494-35841550)
[»] chr4 (62 HSPs)
chr4 (247-344)||(8713227-8713324)
chr4 (244-344)||(22301742-22301842)
chr4 (244-344)||(37683259-37683359)
chr4 (240-338)||(24896981-24897080)
chr4 (246-344)||(32135358-32135456)
chr4 (243-338)||(48349487-48349583)
chr4 (253-338)||(49328-49414)
chr4 (243-335)||(40430121-40430214)
chr4 (238-327)||(41202360-41202449)
chr4 (244-335)||(35339650-35339742)
chr4 (238-336)||(22847098-22847197)
chr4 (244-338)||(24034518-24034613)
chr4 (243-334)||(50561563-50561654)
chr4 (243-327)||(43458406-43458490)
chr4 (244-338)||(47467410-47467505)
chr4 (242-327)||(1522781-1522866)
chr4 (242-338)||(11682206-11682303)
chr4 (242-338)||(11690485-11690582)
chr4 (242-327)||(48990343-48990428)
chr4 (238-341)||(19874122-19874226)
chr4 (244-338)||(3026381-3026476)
chr4 (244-327)||(28803983-28804066)
chr4 (244-338)||(13962481-13962575)
chr4 (245-338)||(30217126-30217220)
chr4 (242-341)||(39540401-39540501)
chr4 (243-338)||(50469062-50469158)
chr4 (242-341)||(52913193-52913293)
chr4 (267-341)||(20434185-20434260)
chr4 (241-327)||(32932581-32932667)
chr4 (245-335)||(34159011-34159102)
chr4 (239-341)||(42348655-42348758)
chr4 (267-341)||(42724181-42724256)
chr4 (244-327)||(43621589-43621672)
chr4 (244-338)||(50602031-50602126)
chr4 (267-341)||(55219890-55219965)
chr4 (267-340)||(613846-613920)
chr4 (240-341)||(55215593-55215695)
chr4 (244-344)||(51322386-51322487)
chr4 (286-341)||(43830217-43830273)
chr4 (243-327)||(51322649-51322732)
chr4 (242-341)||(53875110-53875210)
chr4 (267-341)||(38291855-38291930)
chr4 (267-341)||(52839732-52839807)
chr4 (267-341)||(56362841-56362916)
chr4 (178-232)||(2702679-2702732)
chr4 (240-341)||(23895195-23895297)
chr4 (268-341)||(25857564-25857638)
chr4 (244-341)||(37234205-37234303)
chr4 (241-327)||(37828750-37828835)
chr4 (244-341)||(52307457-52307555)
chr4 (242-327)||(47429844-47429929)
chr4 (241-322)||(53036035-53036116)
chr4 (267-327)||(10542047-10542107)
chr4 (267-319)||(20737713-20737765)
chr4 (267-319)||(56018716-56018768)
chr4 (267-341)||(28406438-28406513)
chr4 (267-341)||(55183527-55183602)
chr4 (162-232)||(22397253-22397322)
chr4 (297-338)||(36851458-36851500)
chr4 (238-319)||(3019676-3019757)
chr4 (277-321)||(7817806-7817850)
chr4 (243-327)||(20293310-20293394)
[»] chr2 (36 HSPs)
chr2 (242-344)||(40659220-40659322)
chr2 (244-344)||(44798809-44798910)
chr2 (244-344)||(45443539-45443640)
chr2 (240-327)||(13480551-13480638)
chr2 (243-327)||(4331883-4331967)
chr2 (243-327)||(26170975-26171059)
chr2 (244-338)||(38629399-38629494)
chr2 (268-341)||(5109182-5109256)
chr2 (242-338)||(7722663-7722760)
chr2 (239-338)||(44456802-44456899)
chr2 (242-341)||(45505772-45505872)
chr2 (237-338)||(458599-458701)
chr2 (242-341)||(927062-927162)
chr2 (242-341)||(15011817-15011917)
chr2 (242-341)||(34202277-34202377)
chr2 (267-341)||(1481834-1481909)
chr2 (267-341)||(13196124-13196199)
chr2 (267-341)||(25853419-25853494)
chr2 (267-341)||(43577026-43577101)
chr2 (267-341)||(44143383-44143458)
chr2 (267-341)||(1520199-1520274)
chr2 (267-341)||(2390673-2390748)
chr2 (267-341)||(3178249-3178324)
chr2 (267-341)||(10638801-10638876)
chr2 (267-341)||(21657950-21658025)
chr2 (286-343)||(10554748-10554806)
chr2 (277-338)||(31569649-31569711)
chr2 (240-341)||(42342964-42343066)
chr2 (267-319)||(27980921-27980973)
chr2 (267-319)||(28067451-28067503)
chr2 (267-315)||(35895515-35895563)
chr2 (286-341)||(39697764-39697820)
chr2 (244-338)||(16313573-16313668)
chr2 (253-339)||(31640795-31640882)
chr2 (267-341)||(40811759-40811834)
chr2 (267-315)||(32551681-32551729)
[»] chr3 (53 HSPs)
chr3 (243-327)||(36232685-36232769)
chr3 (239-338)||(36885742-36885842)
chr3 (242-338)||(38145242-38145339)
chr3 (244-338)||(35039572-35039667)
chr3 (243-344)||(33392510-33392612)
chr3 (244-338)||(7681005-7681100)
chr3 (245-344)||(41588879-41588977)
chr3 (243-327)||(44354512-44354596)
chr3 (245-327)||(48584835-48584917)
chr3 (245-338)||(51662164-51662258)
chr3 (238-338)||(30418684-30418785)
chr3 (243-338)||(19941681-19941777)
chr3 (230-341)||(38871106-38871218)
chr3 (243-338)||(4596428-4596523)
chr3 (244-327)||(11123858-11123941)
chr3 (244-341)||(47098302-47098400)
chr3 (240-341)||(4516013-4516115)
chr3 (237-338)||(52812121-52812222)
chr3 (242-327)||(2613340-2613425)
chr3 (247-342)||(8947859-8947954)
chr3 (247-338)||(49779856-49779947)
chr3 (267-341)||(10841431-10841506)
chr3 (267-341)||(20835581-20835656)
chr3 (267-341)||(25710909-25710984)
chr3 (267-341)||(33712622-33712697)
chr3 (244-338)||(36841107-36841202)
chr3 (245-338)||(52343083-52343177)
chr3 (245-341)||(1774036-1774133)
chr3 (250-327)||(14279112-14279189)
chr3 (242-319)||(20657409-20657486)
chr3 (258-327)||(35233678-35233747)
chr3 (267-319)||(7679719-7679771)
chr3 (244-338)||(11095647-11095742)
chr3 (286-341)||(22781906-22781962)
chr3 (277-341)||(39627121-39627185)
chr3 (286-341)||(41069877-41069933)
chr3 (267-341)||(4044807-4044882)
chr3 (267-341)||(10999745-10999820)
chr3 (267-341)||(20048357-20048432)
chr3 (267-341)||(40586170-40586245)
chr3 (267-341)||(53974333-53974408)
chr3 (241-341)||(33966892-33966993)
chr3 (267-319)||(84411-84463)
chr3 (267-319)||(672090-672142)
chr3 (286-341)||(6268357-6268413)
chr3 (267-319)||(24395118-24395170)
chr3 (267-319)||(32236155-32236207)
chr3 (242-337)||(35155763-35155859)
chr3 (267-341)||(37971673-37971748)
chr3 (286-340)||(54556389-54556444)
chr3 (241-319)||(26090198-26090276)
chr3 (274-322)||(18168502-18168550)
chr3 (196-232)||(20174921-20174957)
[»] chr7 (48 HSPs)
chr7 (243-344)||(19473937-19474037)
chr7 (242-338)||(24980853-24980950)
chr7 (242-338)||(20492682-20492778)
chr7 (244-327)||(12847175-12847258)
chr7 (240-318)||(25764870-25764948)
chr7 (241-338)||(43775880-43775978)
chr7 (242-338)||(40862357-40862454)
chr7 (242-338)||(45870158-45870255)
chr7 (243-338)||(10594083-10594179)
chr7 (247-338)||(39597858-39597950)
chr7 (244-327)||(40305474-40305557)
chr7 (244-338)||(47540290-47540385)
chr7 (244-338)||(47546847-47546942)
chr7 (243-338)||(7883665-7883761)
chr7 (243-315)||(29042143-29042215)
chr7 (239-341)||(38876036-38876139)
chr7 (244-341)||(8203423-8203521)
chr7 (244-341)||(8215900-8215998)
chr7 (241-327)||(12428596-12428682)
chr7 (242-341)||(26015848-26015948)
chr7 (242-341)||(43246939-43247039)
chr7 (267-341)||(7900456-7900531)
chr7 (267-341)||(32542165-32542240)
chr7 (267-341)||(46322028-46322103)
chr7 (267-341)||(46923901-46923976)
chr7 (267-341)||(47065922-47065997)
chr7 (243-338)||(36688725-36688820)
chr7 (244-335)||(42436496-42436588)
chr7 (247-338)||(241685-241776)
chr7 (267-341)||(7790926-7791001)
chr7 (267-341)||(38283573-38283648)
chr7 (244-338)||(46101804-46101899)
chr7 (267-341)||(47779491-47779566)
chr7 (244-327)||(48612861-48612944)
chr7 (237-341)||(21279051-21279156)
chr7 (242-327)||(30173463-30173548)
chr7 (241-341)||(32662350-32662451)
chr7 (242-319)||(39074361-39074438)
chr7 (267-339)||(40705496-40705569)
chr7 (242-322)||(25066568-25066648)
chr7 (274-341)||(27324985-27325053)
chr7 (239-338)||(34591671-34591771)
chr7 (267-327)||(35924253-35924313)
chr7 (267-319)||(42095779-42095831)
chr7 (267-319)||(43047091-43047143)
chr7 (274-329)||(48641965-48642020)
chr7 (239-327)||(25225512-25225600)
chr7 (244-328)||(39598531-39598615)
[»] chr6 (23 HSPs)
chr6 (241-341)||(18024376-18024477)
chr6 (240-338)||(6925773-6925872)
chr6 (239-322)||(31091151-31091234)
chr6 (245-344)||(32173693-32173794)
chr6 (243-338)||(23350353-23350449)
chr6 (245-338)||(34085833-34085927)
chr6 (240-341)||(7080968-7081070)
chr6 (241-341)||(6625355-6625456)
chr6 (244-335)||(8525525-8525617)
chr6 (243-327)||(11369081-11369165)
chr6 (240-338)||(8811292-8811391)
chr6 (267-341)||(29122340-29122415)
chr6 (247-335)||(5714880-5714969)
chr6 (242-341)||(13889944-13890044)
chr6 (267-341)||(3094611-3094686)
chr6 (267-341)||(6167922-6167997)
chr6 (267-341)||(18893698-18893773)
chr6 (267-341)||(29630482-29630557)
chr6 (258-327)||(29623173-29623242)
chr6 (266-327)||(13445403-13445464)
chr6 (286-341)||(7141305-7141361)
chr6 (196-232)||(8011025-8011061)
chr6 (286-341)||(25335124-25335180)
[»] chr8 (49 HSPs)
chr8 (244-338)||(31793838-31793933)
chr8 (264-344)||(39712697-39712777)
chr8 (245-338)||(5347466-5347560)
chr8 (247-335)||(12722559-12722648)
chr8 (241-334)||(35329720-35329813)
chr8 (244-338)||(42687930-42688025)
chr8 (241-327)||(41942362-41942448)
chr8 (243-338)||(4005764-4005860)
chr8 (243-338)||(36057721-36057817)
chr8 (244-327)||(38945688-38945771)
chr8 (247-341)||(7970020-7970114)
chr8 (240-335)||(2828306-2828402)
chr8 (243-319)||(17601333-17601409)
chr8 (243-327)||(38234416-38234500)
chr8 (267-341)||(22439591-22439666)
chr8 (267-341)||(24822709-24822784)
chr8 (243-341)||(35605336-35605435)
chr8 (243-338)||(38460091-38460186)
chr8 (267-341)||(39365269-39365344)
chr8 (245-327)||(4229637-4229719)
chr8 (242-327)||(38168486-38168571)
chr8 (242-341)||(3137210-3137310)
chr8 (267-319)||(8013933-8013985)
chr8 (242-341)||(17122088-17122188)
chr8 (267-319)||(37578006-37578058)
chr8 (286-341)||(42512201-42512257)
chr8 (286-341)||(43664310-43664366)
chr8 (267-341)||(5988211-5988286)
chr8 (267-341)||(8376263-8376338)
chr8 (267-341)||(23357242-23357317)
chr8 (267-341)||(26290764-26290839)
chr8 (267-341)||(26304021-26304096)
chr8 (267-341)||(26337376-26337451)
chr8 (241-319)||(5599869-5599947)
chr8 (241-319)||(5640673-5640751)
chr8 (245-338)||(11266134-11266228)
chr8 (241-319)||(28885720-28885798)
chr8 (242-319)||(11587896-11587973)
chr8 (242-341)||(3032883-3032983)
chr8 (267-319)||(15839478-15839530)
chr8 (242-341)||(26122511-26122611)
chr8 (267-319)||(28909685-28909737)
chr8 (286-341)||(34917580-34917636)
chr8 (267-341)||(8656577-8656652)
chr8 (286-329)||(16571248-16571291)
chr8 (178-232)||(2669717-2669770)
chr8 (286-327)||(5552-5593)
chr8 (167-232)||(2563427-2563491)
chr8 (196-232)||(9782252-9782288)
[»] scaffold0578 (1 HSPs)
scaffold0578 (245-338)||(8719-8813)
[»] scaffold0391 (1 HSPs)
scaffold0391 (241-341)||(3872-3973)
[»] scaffold0368 (1 HSPs)
scaffold0368 (242-341)||(13860-13960)
[»] scaffold0896 (1 HSPs)
scaffold0896 (240-338)||(3739-3838)
[»] scaffold0276 (2 HSPs)
scaffold0276 (267-341)||(12543-12618)
scaffold0276 (242-341)||(14035-14135)
[»] scaffold0007 (2 HSPs)
scaffold0007 (267-341)||(157101-157176)
scaffold0007 (244-327)||(200033-200116)
[»] scaffold0065 (1 HSPs)
scaffold0065 (267-319)||(38421-38473)
[»] scaffold0438 (1 HSPs)
scaffold0438 (267-341)||(2101-2176)
[»] scaffold0003 (1 HSPs)
scaffold0003 (244-338)||(365840-365935)
[»] scaffold0294 (1 HSPs)
scaffold0294 (289-327)||(12554-12592)
[»] scaffold0004 (1 HSPs)
scaffold0004 (178-230)||(227778-227829)


Alignment Details
Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 36205900 - 36206111
Alignment:
Q  23 atatactgccatcctttcattggtagcaaatgtgacnnnnnnntagattttaattaaggctatagtgtgattacacaatatcatatttttgcattcttta 122  Q
    |||||||||||||| ||||||||| ||||| |||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36205900 atatactgccatccattcattggtcgcaaa-gtgacaataaaatagattttaattaaggctatagtgtgattacacaatattatatttttgcattcttta 36205998  T
Q  123 tcaaatcttgagcatctcacgttgaact--tgnnnnnnngcttacgcaaatagtaatgc-ttttatgttagatcattaagatcatactaatgaaaattgt 219  Q
    ||||||||||||||||||| ||||||||  |        |||||||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||||||    
T  36205999 tcaaatcttgagcatctcaagttgaacttataaaaaaaagcttacgcaaatagtaatgctttttatgttagttca-taagatcttactaacgaaaattgt 36206097  T
Q  220 atattcataagtta 233  Q
    ||||||||||||||    
T  36206098 atattcataagtta 36206111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 36294178 - 36294280
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||||||||||||| ||||| ||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  36294178 taagagtttttctaattacaccatgtttaatcatggttacaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaggcctcttccttc 36294277  T
Q  340 ttc 342  Q
    |||    
T  36294278 ttc 36294280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 18864428 - 18864513
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  18864428 aagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaa 18864513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 12189393 - 12189293
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||||| |||||||||||||||| ||||| ||||| ||||||    
T  12189393 aagagtttttctaattacaccttgtttaatcctggttacaccccaaaatgataaaattacccttccataaaatttaattttcaaaaaacctctcccttct 12189294  T
Q  341 t 341  Q
    |    
T  12189293 t 12189293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 40738891 - 40738987
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  40738891 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctt 40738987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 4621143 - 4621241
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||||| |||||| |||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  4621143 ttaagagtttttctaattacacct-gtttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctt 4621241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 6245188 - 6245282
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||| ||||| |||||||| |||||| ||||| | |||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  6245188 agtttttctaattacaccctgtttaattctggttgcactctagaatgacaaaattacactttcataaaatttaattttcaaaaagactcttcctt 6245282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 10666225 - 10666139
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||| |||| ||||| ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||    
T  10666225 taagagtttttataattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaa 10666139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 7338624 - 7338720
Alignment:
Q  248 ttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttct 343  Q
    ||||||||| ||||  ||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||||    
T  7338624 ttttctaatgacactctgtttaatcctggttgcaccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagcatcttcctttttct 7338720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 31498837 - 31498929
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    ||||||||||||| ||||| |||||||| || ||| ||||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  31498837 gagtttttctaattacaccctgtttaattcttgttgcactctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 31498929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 31484649 - 31484744
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||| | |||||||| |||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  31484649 gagtttttctaattacagcctgtttaattctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 31484744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 37105851 - 37105933
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||| ||||  |||||||||||| || || || ||||||||||||||||||||||||||||||||||||| ||||    
T  37105851 agtttttctaattacacaatgtttaatcctgattgcattctaaaatgacaaaattaccctttcataaaatttaattttcaaaa 37105933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 43548668 - 43548575
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcc 336  Q
    ||||||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||    
T  43548668 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcc 43548575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 15272853 - 15272771
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||| ||||| ||||||||||||||| ||||  |||||| |||||||| |||| |||||||||||||||| ||||    
T  15272853 agtttttctaattacaccctgtttaatcctggttgcacttcaaaatgtcaaaattatccttccataaaatttaattttcaaaa 15272771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 37274697 - 37274608
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||||| |||||  ||||||||||| || ||| | |||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  37274697 tttttctaattacacccagtttaatcctgcttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 37274608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 8232542 - 8232626
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||  || |||||||||||| ||| | ||||||| || |||||||||||||||||||||||||| ||||    
T  8232542 agagtttttctaattacactctgcttaatcctggttgcaccccaaaatgataagattaccctttcataaaatttaattttcaaaa 8232626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 42437460 - 42437368
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    ||||||||||||| ||||  ||||||||||||||| ||| | ||||||||| ||||| |||| |||||||||||||||| ||||||| |||||    
T  42437460 gagtttttctaattacactctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttc 42437368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 31527640 - 31527565
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||||| |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  31527640 ttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 31527565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 37340796 - 37340895
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||||| ||||| |||||||| ||| || ||  | ||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||    
T  37340796 ttaagagtttttctaattacaccctgtttaattctgattgcatcccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcctt 37340895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 41882005 - 41881922
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||||| ||||||||  ||||| ||| | ||||||||||||||||| || |||||||||||||||| ||||    
T  41882005 gagtttttctaattacaccctgtttaattttggttgcaccccaaaatgacaaaattacctttccataaaatttaattttcaaaa 41881922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 18978453 - 18978533
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| ||||  ||||||||||||||| ||||    
T  18978453 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttctataaaatttaattttcaaaa 18978533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 4156231 - 4156156
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  4156231 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 4156156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 9065721 - 9065796
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  9065721 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 9065796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 18522158 - 18522244
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||||| |||| || || |||||||||| ||| | ||||| ||||||||| |||| |||||||||||||||| ||||    
T  18522158 ttaagagtttttctaattacacattatt-aatcctggttgcaccctaaaataacaaaattatccttccataaaatttaattttcaaaa 18522244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 13211060 - 13210979
Alignment:
Q  258 acaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||| ||||||||||||||| |||   ||||||||||||||||  || |||||||||||||||| ||||||| ||||||||    
T  13211060 acaccctgtttaatcctggttgcaccttaaaatgacaaaattactgttccataaaatttaattttcaaaaagcatcttcctt 13210979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 6470020 - 6469944
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||||||||| |  ||||||  |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  6470020 agagtttttctacttgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 6469944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 33280851 - 33280907
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  33280851 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 33280907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 13145943 - 13145868
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  13145943 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaaccttttccttctt 13145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 19034808 - 19034708
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  ||||||  |||||| ||||| ||| | ||||| |||| |||| ||||||||||||||| ||||| ||||||| | ||||||||    
T  19034808 aagagtttttctacttgcaccttagttaatcatggttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcttattccttct 19034709  T
Q  341 t 341  Q
    |    
T  19034708 t 19034708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 24559110 - 24559166
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| || |||||||||    
T  24559110 aaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctt 24559166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 24600142 - 24600198
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| || |||||||||    
T  24600142 aaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctt 24600198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 25084879 - 25084931
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  25084879 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 25084931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 25142852 - 25142904
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  25142852 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 25142904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 37865917 - 37865973
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||| || ||||||    
T  37865917 aaaatgacaaaattatcctttcataaaatttgattttcaaaaagcctatttcttctt 37865973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 43518354 - 43518279
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| | |||||||||||||||||| ||||| ||||||| | |||||||||    
T  43518354 ttaatcatggttgcaccccaaaatgacaagagtaccctttcataaaatttgattttcaaaaagcatattccttctt 43518279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 10552506 - 10552588
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||| ||| | || |||||||||||| ||    |||||||||||||||  ||| |||||||||||||||| ||||    
T  10552506 agtttttctaattacatcctgattaatcctggttgcatcttaaaatgacaaaattattcttccataaaatttaattttcaaaa 10552588  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 27308706 - 27308774
Alignment:
Q  277 ttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttctc 344  Q
    |||||| | ||||||| ||||||| | ||||||||||||||||||| | |||||||||| ||| |||||    
T  27308706 ttacaccctaaaatgataaaattatcttttcataaaatttaattttcagaaagcctctttctttttctc 27308774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 38760585 - 38760537
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatt 315  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||    
T  38760585 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 38760537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 7009006 - 7009105
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttctt 341  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7009006 aagagtttttctaatcacaccctgtttaatcctggttacaccccaaaataacaaaattaccctttcataaaatttaattttaaaaagcctcttccttctt 7009105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 24527726 - 24527620
Alignment:
Q  238 tattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcct 337  Q
    |||| |||||||||||||||||||| |||||||||||| || || || |||||| |||||||||| |||||||||||||||||||||||||| |||||||    
T  24527726 tatttagagtttttctaatcacaccctgtttaatcctgattgcattccaaaatgccaaaattaccatttcataaaatttaattttaaaaagcatcttcct 24527627  T
Q  338 tcttctc 344  Q
    |||||||    
T  24527626 tcttctc 24527620  T

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Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 29922309 - 29922214
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  29922309 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctt 29922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 40498613 - 40498712
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||||| ||||| |||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  40498613 ttaagagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcatcttcctt 40498712  T

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Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 51776028 - 51776124
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| ||||||||||||||| ||  | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  51776028 agagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttcctt 51776124  T

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Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 17605725 - 17605822
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| ||||| ||| ||||||||||| ||| | ||||||||||||||||| || |||||||||||||||| ||||||| ||||||||    
T  17605725 aagagtttttctaattacaccctgtgtaatcctggttgcaccctaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatcttcctt 17605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 51002118 - 51002021
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| | ||| |||||||||||| || ||| | ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  51002118 aagagtttttctaattataccctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttcctt 51002021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 13146022 - 13146116
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||| ||| ||||||||| | ||| ||||||| ||||||||    
T  13146022 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattactcttccataaaattaattttcaaaaagcatcttcctt 13146116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 26307843 - 26307941
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||   ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  26307843 taagagtttttctaattacaccctgtttaatcttggttgcaccttaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctt 26307941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 3485812 - 3485917
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcat-aaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||| |||| ||||| ||||||||| ||||||||||  ||||| ||||||||| ||||| || ||||||||||||| ||||||||||||||||    
T  3485812 taagagtttttttaattacaccctgtttaatcttggttacacttcaaaataacaaaattatccttttataaaaatttaattttcaaaaagcctcttcctt 3485911  T
Q  339 cttctc 344  Q
     |||||    
T  3485912 tttctc 3485917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 41712763 - 41712855
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||    
T  41712763 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcctt 41712855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 9640979 - 9640884
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||||||||||| ||||| | || |||||||||| ||  | ||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  9640979 taagagtttttctaattacacccttttcaatcctggttgcatcctaaaatgacaaaattacccttttataaaatttaattttcaaaaagcatcttc 9640884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 35273826 - 35273921
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| | ||||||||||||||||||| ||  | ||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||    
T  35273826 gagtttttctaattaaaccttgtttaatcctggttgcatcctaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcctt 35273921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 23444424 - 23444334
Alignment:
Q  248 ttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    ||||||||| ||||| | ||||||| ||||| ||| | | ||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  23444424 ttttctaattacaccctatttaatcttggttgcaccccacaatgacaaaattatcctttcataaaatttaattttcaaaagcatcttcctt 23444334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 32086480 - 32086566
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaag 328  Q
    ||||||||||||||| ||||| |||||||||||| || ||| | ||||||||| ||||| |||| |||||||||||||||| |||||    
T  32086480 aagagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaag 32086566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 12601849 - 12601948
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcct 337  Q
    |||| ||||||||||||| ||||| |||||||| |||||| || || |||||||||||||||  ||| |||||||||||||||| ||||||| |||||||    
T  12601849 attatgagtttttctaattacaccctgtttaattctggttgca-tccaaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttcct 12601947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 19247859 - 19247767
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||| ||| ||||||||||||||||| ||  | ||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||    
T  19247859 tttttctaattacatcttgtttaatcctggttgcatcctaaaatgataaaattacccttccataaaattttattttcaaaaagcatcttcctt 19247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 20581522 - 20581597
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  20581522 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctt 20581597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 32561260 - 32561335
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatt 315  Q
    ||||||||||||||||| ||||| || |||||||||||| |||  |||||||||||||||||||||  ||||||||    
T  32561260 ttaagagtttttctaattacaccatgattaatcctggttgcacctaaaaatgacaaaattacccttctataaaatt 32561335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 17474665 - 17474747
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||| ||| | | ||||||||||||| ||  | ||||||||||||||| ||||||||||||||||||||| ||||    
T  17474665 agtttttctaattacatcctctttaatcctggttgcatcctaaaatgacaaaattatcctttcataaaatttaattttcaaaa 17474747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 19514220 - 19514126
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||| ||||| ||||||||||||||| ||    ||||| |||||||||| ||| |||||||||||||||| ||||||| ||||||||    
T  19514220 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttcctt 19514126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 8114990 - 8114897
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    ||||||||| |||| ||||  ||||||||||||||| ||| | ||||||||||||||| |||| || ||||||||||||| ||||||| |||||    
T  8114990 agagtttttttaattacacactgtttaatcctggttgcaccctaaaatgacaaaattatccttccagaaaatttaattttcaaaaagcatcttc 8114897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 341
Target Start/End: Complemental strand, 33010873 - 33010772
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||    
T  33010873 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 33010774  T
Q  340 tt 341  Q
    ||    
T  33010773 tt 33010772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 42948187 - 42948287
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  42948187 aagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 42948286  T
Q  341 t 341  Q
    |    
T  42948287 t 42948287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 2482693 - 2482618
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  2482693 ttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttctt 2482618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 338
Target Start/End: Original strand, 5672915 - 5672986
Alignment:
Q  268 taatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||| ||  | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  5672915 taatcctggttgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 5672986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 6016698 - 6016615
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||||| ||||||||||||||| || |  ||||||||||||||| | ||  ||||||||||||||| ||||    
T  6016698 gagtttttctaattacaccctgtttaatcctggttgcattttaaaatgacaaaattatcattctataaaatttaatttttaaaa 6016615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 341
Target Start/End: Original strand, 13942142 - 13942241
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||||| |  |||| | ||||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  13942142 agagtttttctacttgcaccctatttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 13942241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 24317204 - 24317279
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  24317204 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 24317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 28852980 - 28852905
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  28852980 ttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 28852905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 39569516 - 39569441
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  39569516 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 39569441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 341
Target Start/End: Original strand, 18909215 - 18909313
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||| | ||||| |  |||||| ||||| || || |||||||||| |||||||||||||||||||| ||||| ||||||||| ||| |||||    
T  18909215 gagtttttctacttacaccctagttaatcatggttgcattccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattctttctt 18909313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 14290356 - 14290295
Alignment:
Q  266 tttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| |||   |||||||||||||||||||| |||||||||||||||| ||||    
T  14290356 tttaatcctggttgcaccttaaaatgacaaaattacccttccataaaatttaattttcaaaa 14290295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 48933209 - 48933286
Alignment:
Q  238 tattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatt 315  Q
    ||||||||||||||||||| ||||| || |||||| ||||| |||   ||||||| |||||||||||| |||||||||    
T  48933209 tattaagagtttttctaattacaccctgattaatcatggttgcacctcaaaatgataaaattacccttccataaaatt 48933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 15932784 - 15932884
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| ||||||||    
T  15932784 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 15932883  T
Q  341 t 341  Q
    |    
T  15932884 t 15932884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 6653247 - 6653322
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaattt-aattttaaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| | ||| ||||||||| |||||||||    
T  6653247 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgactttcaaaaagcctattccttctt 6653322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 34270834 - 34270759
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  34270834 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 34270759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 40400056 - 40400131
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  40400056 ttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttctt 40400131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 44721894 - 44721969
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  44721894 ttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttctt 44721969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 52024748 - 52024823
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||  |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  52024748 ttaatcatggttgcaccccaaaatgacaggattaccctttcataaaatttgattttcaaaaagcctattccttctt 52024823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 52044450 - 52044375
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  52044450 ttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttctt 52044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 46291907 - 46291814
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcc 336  Q
    ||||||||||||| |||| || ||||||||||||| ||    ||||||||||||||||   | |||||||||||| ||||||||||| ||||||    
T  46291907 gagtttttctaattacacattatttaatcctggttgcatcttaaaatgacaaaattacttatccataaaatttaatttttaaaaagcatcttcc 46291814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 11173561 - 11173509
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  11173561 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 11173509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 14247532 - 14247456
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaattta 317  Q
    |||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||||    
T  14247532 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattta 14247456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 39982286 - 39982338
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  39982286 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 39982338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 50727820 - 50727892
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| ||||||    
T  50727820 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 50727892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 51290572 - 51290624
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  51290572 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 51290624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 13240280 - 13240225
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt 322  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| |||||    
T  13240280 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgatttt 13240225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 341
Target Start/End: Complemental strand, 26151253 - 26151151
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| |  |||| |  |||||| ||||| ||| | ||||||| || |||| ||||||||||||||| ||||| ||||||| | ||||||    
T  26151253 ttaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcatattcctt 26151154  T
Q  339 ctt 341  Q
    |||    
T  26151153 ctt 26151151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 16708904 - 16708871
Alignment:
Q  196 taagatcatactaatgaaaattgtatattcataa 229  Q
    ||||||| ||||||||||||||||||||||||||    
T  16708904 taagatcttactaatgaaaattgtatattcataa 16708871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 40536830 - 40536797
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||||||| |||||||||||||||||||||||    
T  40536830 aaaatgacaagattaccctttcataaaatttaat 40536797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 341
Target Start/End: Complemental strand, 51677335 - 51677234
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattt-taaaaagcctcttccttc 339  Q
    |||||||||||||| |  |||| |  |||||| | ||| || || |||||||||| |||| ||||||||||||||| ||||  ||||||||| |||||||    
T  51677335 taagagtttttctacttgcaccctagttaatcatagttgcattctaaaatgacaagattatcctttcataaaatttgatttacaaaaagcctattccttc 51677236  T
Q  340 tt 341  Q
    ||    
T  51677235 tt 51677234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 2138287 - 2138231
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||| || |||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  2138287 aaaatgataagattaccctttcataaaatttgattttcaaaaaacctattccttctt 2138231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 35841494 - 35841550
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||| ||||||||| |||| |||||||||||||||| |||||| ||||| ||||||    
T  35841494 aaaataacaaaattatccttccataaaatttaattttcaaaaagtctctttcttctt 35841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 344
Target Start/End: Original strand, 8713227 - 8713324
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttctc 344  Q
    |||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8713227 tttttctaatcacaccctgtttaatccttgttacaccccaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttctc 8713324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 22301842 - 22301742
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttct 343  Q
    ||||||||||||||||||| ||||||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22301842 gagtttttctaatcacaccctgtttaatcctggttgcaccccaaaataacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttct 22301743  T
Q  344 c 344  Q
    |    
T  22301742 c 22301742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 37683359 - 37683259
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttct 343  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  37683359 gagtttttctaatcacaccctgtttaatcctggttacactccaaaatgtcaaaattatcatttcataaaatttaattttaaaaagcatcttccttcttct 37683260  T
Q  344 c 344  Q
    |    
T  37683259 c 37683259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 24896981 - 24897080
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcctt 338  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||    
T  24896981 ttaagagtttttctaattacaccttgtttaatcctggttacaccccaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcctt 24897080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 246 - 344
Target Start/End: Original strand, 32135358 - 32135456
Alignment:
Q  246 gtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttctc 344  Q
    |||||| |||||||||| |||||||| |||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32135358 gtttttttaatcacaccctgtttaatgctggttacatcctaaaatgacaaaattaccttttcataaaatttaattttaaaaagcctcttccttcttctc 32135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 48349583 - 48349487
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||| |||||||||||||||||||||  |||| ||||||| ||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  48349583 agagtttttctaattacaccttgtttaatcctggttgtactctaaaatgataaaattacctttttataaaatttaattttcaaaaagactcttcctt 48349487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 49414 - 49328
Alignment:
Q  253 taatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcctt 338  Q
    |||| ||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  49414 taattacaccctgtttaatcttggttgcactctaaaatgacaaaattaccctttcataaaatttaatttttaaaaagcatcttcctt 49328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 40430121 - 40430214
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||||||||| ||| | ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  40430121 agagtttttctaattacatcatgtttaatcctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 40430214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 41202449 - 41202360
Alignment:
Q  238 tattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||| |||||||||||||||| ||||    
T  41202449 tattaagagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaa 41202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 35339742 - 35339650
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    ||||||||||||| ||||| ||||||||||||||| ||| | |||||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  35339742 gagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaagattacccttccataaaatttaattttcaaaaagcatcttc 35339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 22847098 - 22847197
Alignment:
Q  238 tattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcc 336  Q
    |||| |||||||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| | ||||||||||||||||||| ||||||| ||||||    
T  22847098 tatttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatcttttcataaaatttaattttcaaaaagcatcttcc 22847197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 24034518 - 24034613
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| |||||||| ||||||  || | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  24034518 gagtttttctaattacaccctgtttaattctggttgtaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 24034613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 243 - 334
Target Start/End: Original strand, 50561563 - 50561654
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctctt 334  Q
    |||||||||||||| ||||  ||||||||||||||| ||||| |||||||||||||||||||| ||||||||| | ||| ||||||| ||||    
T  50561563 agagtttttctaattacactctgtttaatcctggttgcactctaaaatgacaaaattacccttccataaaattaattttcaaaaagcatctt 50561654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 43458490 - 43458406
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||| |||| ||||| ||||||||| ||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||    
T  43458490 agagtttttataattacaccctgtttaatcatggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaa 43458406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 47467505 - 47467410
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaattta-attttaaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| ||||||||| ||||| ||  | |||||||||||||||||||| |||||||||||  ||||||||||| ||||||||    
T  47467505 gagtttttctaattacaccctgtttaatcatggttgcatcccaaaatgacaaaattacccttccataaaatttagtttttaaaaagcatcttcctt 47467410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 1522781 - 1522866
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||| | ||| ||||||||||||||| ||  | |||||||||||||||| ||| |||||||||||||||| ||||    
T  1522781 aagagtttttctaattataccctgtttaatcctggttgcatcctaaaatgacaaaattactcttccataaaatttaattttcaaaa 1522866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 11682206 - 11682303
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| |||   |||| |||||||||| ||| | ||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  11682206 aagagtttttctaattacattctgttcaatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttcctt 11682303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 11690485 - 11690582
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| |||   |||| |||||||||| ||| | ||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  11690485 aagagtttttctaattacattctgttcaatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttcctt 11690582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 48990343 - 48990428
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||| ||||| | ||||||||| ||| ||| | ||||||| |||||||||||| |||||||||||||||| ||||    
T  48990343 aagagtttttctaattacaccctatttaatcctcgttgcaccctaaaatgataaaattacccttccataaaatttaattttcaaaa 48990428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 19874226 - 19874122
Alignment:
Q  238 tattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcc 336  Q
    ||||||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||    
T  19874226 tattaagagtttttctacttgcaccctacttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcc 19874127  T
Q  337 ttctt 341  Q
    |||||    
T  19874126 ttctt 19874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 3026381 - 3026476
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| | ||| |||| ||||||| || ||  | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  3026381 gagtttttctaattaaaccctgttaaatcctgattgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 3026476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 28804066 - 28803983
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||  |||| ||||||||| |||||  || | |||||||||||||||||||| |||||||||||||||| ||||    
T  28804066 gagtttttctaattgcaccctgtttaatcatggttgtaccctaaaatgacaaaattacccttccataaaatttaattttcaaaa 28803983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 13962575 - 13962481
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| ||||||||||| ||| ||| | ||||||||||||||||| || ||||||||| | ||| ||||||| || |||||    
T  13962575 gagtttttctaattacaccctgtttaatcctagttgcaccccaaaatgacaaaattacctttccataaaattaattttcaaaaagcatcatcctt 13962481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 30217220 - 30217126
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||| ||  | | ||||||||||||| || | |||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  30217220 agtttttctaattacgtcctatttaatcctggttgcatttaaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctt 30217126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 39540501 - 39540401
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  39540501 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 39540402  T
Q  341 t 341  Q
    |    
T  39540401 t 39540401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 50469062 - 50469158
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcctt 338  Q
    |||||||||||||| ||| | |||||||||||||||  |||| ||||||| ||||||| ||||  ||||| ||||| ||||||||||| ||||||||    
T  50469062 agagtttttctaattacatcctgtttaatcctggttgtactctaaaatgataaaattatccttctataaactttaatttttaaaaagcatcttcctt 50469158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 52913293 - 52913193
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  52913293 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 52913194  T
Q  341 t 341  Q
    |    
T  52913193 t 52913193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 20434185 - 20434260
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  20434185 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 20434260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 32932581 - 32932667
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttaca-ctcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||||| | | | |||||||| |||||| || ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  32932581 taagagtttttctaattatatcctgtttaattctggttgcatctcaaaa-tgacaaaattacattttcataaaatttaattttaaaaa 32932667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 34159011 - 34159102
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||||||| |||||||||||||| |||||| ||    ||||||||||||||| ||||  ||||||||||||||| ||||||| |||||    
T  34159011 agtttttctaattacaccttgtttaattctggttgcatcttaaaatgacaaaattatccttctataaaatttaattttcaaaaagcatcttc 34159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 341
Target Start/End: Original strand, 42348655 - 42348758
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcct 337  Q
    |||||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||    
T  42348655 attaagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 42348754  T
Q  338 tctt 341  Q
    ||||    
T  42348755 tctt 42348758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 42724256 - 42724181
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  42724256 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 42724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 43621672 - 43621589
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||||| | |||||||||| || ||  | ||||||||||||||| ||||| ||||||||||||||| ||||    
T  43621672 gagtttttctaattacaccctttttaatcctgattgcatcctaaaatgacaaaattatccttttataaaatttaattttcaaaa 43621589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 50602126 - 50602031
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||| |||| ||||| ||||||||||||||| || |  ||||| ||||||||| ||||| |||||||||||||||  |||||| ||||||||    
T  50602126 gagtttttttaattacaccctgtttaatcctggttgcattttaaaataacaaaattatccttttataaaatttaattttcgaaaagcatcttcctt 50602031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 55219890 - 55219965
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  55219890 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 55219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 613846 - 613920
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  613846 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 613920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 341
Target Start/End: Complemental strand, 55215695 - 55215593
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| ||||||    
T  55215695 ttaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 55215596  T
Q  339 ctt 341  Q
    |||    
T  55215595 ctt 55215593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 51322487 - 51322386
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttc 342  Q
    ||||||||||||| ||||  |||||||| |||||| ||  | |||| || |||||||||||| |||||||||||||||| ||||||| ||||| || |||    
T  51322487 gagtttttctaattacactctgtttaattctggttgcatcccaaaaggataaaattacccttccataaaatttaattttcaaaaagcatcttcttttttc 51322388  T
Q  343 tc 344  Q
    ||    
T  51322387 tc 51322386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 43830273 - 43830217
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  43830273 aaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttctt 43830217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 51322649 - 51322732
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||| || |||||||| ||||| |||   ||||||| ||||||| ||||||||||||||||||||| ||||    
T  51322649 agagtttttctaattacatct-gtttaatcttggttgcacctcaaaatgataaaattatcctttcataaaatttaattttcaaaa 51322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 53875210 - 53875110
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||  ||||||||    
T  53875210 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttct 53875111  T
Q  341 t 341  Q
    |    
T  53875110 t 53875110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 38291930 - 38291855
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| |||  ||||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  38291930 ttaatcatggttgcaccaaaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttctt 38291855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 52839807 - 52839732
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||| |||||||||||||||||||||||||| ||||| ||||||| | |||||||||    
T  52839807 ttaatcatggttgcaccccaaaacgacaaaattaccctttcataaaatttgattttcaaaaagcttattccttctt 52839732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 56362841 - 56362916
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  56362841 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttctt 56362916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 2702679 - 2702732
Alignment:
Q  178 gcttttatgttagatcattaagatcatactaatgaaaattgtatattcataagtt 232  Q
    ||||||||||||  |||| |||||| |||||||||||||||||||||||||||||    
T  2702679 gcttttatgttaattcat-aagatcttactaatgaaaattgtatattcataagtt 2702732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 341
Target Start/End: Complemental strand, 23895297 - 23895195
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| |  |||| |  |||||| ||||| ||  | |||||||||| |||| ||||||||||||||| ||||| ||||||||| ||||||    
T  23895297 ttaagagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 23895198  T
Q  339 ctt 341  Q
    |||    
T  23895197 ctt 23895195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 25857564 - 25857638
Alignment:
Q  268 taatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||| ||||| ||| | |||||||||| |||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  25857564 taatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttctt 25857638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 37234303 - 37234205
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||| |  ||||||  |||||  ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  37234303 gagtttttctacttgcaccttagttaattatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 37234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 37828750 - 37828835
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||||| ||||||  ||||||| ||||| ||    ||||| ||||||||||||| ||||||||||||||||| ||||    
T  37828750 taagagtttttctaattacacctc-tttaatcttggttgcatatcaaaataacaaaattaccctctcataaaatttaattttcaaaa 37828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 52307555 - 52307457
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||| | ||||| |  |||||| ||||| ||  | ||||||| || |||| ||||||||||||||||||||| ||||||||| |||||||||    
T  52307555 gagtttttctacttacaccctagttaatcatggttgcatcctaaaatgataagattatcctttcataaaatttaattttcaaaaagcctattccttctt 52307457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 47429929 - 47429844
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||| |||   | ||||||||||||| ||  | ||||||| |||||||| ||||||||||||| | |||||||||    
T  47429929 aagagtttttctaattacattctatttaatcctggttgcatcctaaaatgataaaattactctttcataaaattaatttttaaaaa 47429844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 53036116 - 53036035
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt 322  Q
    |||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| |||||    
T  53036116 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgatttt 53036035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 10542107 - 10542047
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||    
T  10542107 ttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaa 10542047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 20737713 - 20737765
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  20737713 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 20737765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 56018768 - 56018716
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  56018768 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 56018716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 28406513 - 28406438
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| |||||| || |||||||||    
T  28406513 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagtctattccttctt 28406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 55183602 - 55183527
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||||| || ||||| |||||||||||||| ||||| ||||||||| |||||||||    
T  55183602 ttaatcatggttgcaccccaaaatgataagattactctttcataaaatttgattttcaaaaagcctattccttctt 55183527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 22397253 - 22397322
Alignment:
Q  162 ttacgcaaatagtaatgcttttatgttagatcattaagatcatactaatgaaaattgtatattcataagtt 232  Q
    ||||||||||| | | ||||||| ||||  |||| |||||| |||||| ||||||||||||||||||||||    
T  22397253 ttacgcaaataattaagcttttaagttaattcat-aagatcttactaacgaaaattgtatattcataagtt 22397322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 36851458 - 36851500
Alignment:
Q  297 attaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  36851458 attaccctttcataaaatttaattttcaaaaagactcttcctt 36851500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 3019676 - 3019757
Alignment:
Q  238 tattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||| ||||||||| |||| ||||| ||| |||| || |||||||   ||| ||||||||||||||||| || |||||||||    
T  3019676 tatttagagtttttttaattacaccctgtgtaattctagttacaccataaagtgacaaaattacccttttatcaaatttaat 3019757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 7817806 - 7817850
Alignment:
Q  277 ttacactcaaaaatgacaaaattaccctttcataaaatttaattt 321  Q
    |||||||| ||||||||||||||| ||||  ||||||||||||||    
T  7817806 ttacactctaaaatgacaaaattatccttaaataaaatttaattt 7817850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 20293394 - 20293310
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| |||| ||||||||||||  || |||   ||||||| ||||||| ||||   |||||||||||||| ||||    
T  20293394 agagtttttctaattacactttgtttaatcctaattgcaccttaaaatgataaaattatccttctttaaaatttaattttcaaaa 20293310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 242 - 344
Target Start/End: Complemental strand, 40659322 - 40659220
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttctt 341  Q
    |||| |||||||||||||||| ||||||||  ||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  40659322 aagaatttttctaatcacaccatgtttaattatggttacactttaaaatgaaaaaattacccttttataaaatttaattttaaaaagcctattccttctt 40659223  T
Q  342 ctc 344  Q
    |||    
T  40659222 ctc 40659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 344
Target Start/End: Original strand, 44798809 - 44798910
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttccttcttc 342  Q
    |||||||| |||| ||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||||| ||| |||||||||||||||| |||    
T  44798809 gagtttttttaattacaccctgtttaatcctggttacacttcaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcctttttc 44798908  T
Q  343 tc 344  Q
    ||    
T  44798909 tc 44798910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 45443640 - 45443539
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttc 342  Q
    ||||||||||||| ||||| |||||||||||| ||||||   ||||||| ||||||||||||||||||||||||||||| ||||||||||||| || |||    
T  45443640 gagtttttctaattacaccatgtttaatcctgattacacctcaaaatgataaaattaccctttcataaaatttaattttcaaaaagcctcttcatttttc 45443541  T
Q  343 tc 344  Q
    ||    
T  45443540 tc 45443539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 13480638 - 13480551
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||||| ||||| |||||||||||| || |||   ||||||||||||||||||||||||||||||||||||| ||||    
T  13480638 ttaagagtttttctaattacaccatgtttaatcctgattgcaccttaaaatgacaaaattaccctttcataaaatttaattttcaaaa 13480551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 4331967 - 4331883
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||| | ||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||| ||||    
T  4331967 agagtttttctaattacaccctctttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaa 4331883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 26170975 - 26171059
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||| ||||||||| ||||| ||| | ||||| |||||||||||||| |||||||||||||||| ||||    
T  26170975 agagtttttctaattacaccctgtttaatcttggttgcaccccaaaataacaaaattacccttccataaaatttaattttcaaaa 26171059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 38629494 - 38629399
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| | ||||||||||||| ||  | ||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||    
T  38629494 gagtttttctaattacaccctctttaatcctggttgcatcctaaaatgataaaattatcctttcataaaatttaattttcaaaaagactcttcctt 38629399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 5109256 - 5109182
Alignment:
Q  268 taatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||||| |||||||||||||    
T  5109256 taatcctggttacactctaaaatgacaaaattattcttacataaaatttaattttcaaaaaacctcttccttctt 5109182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 7722760 - 7722663
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattt-taaaaagcctcttcctt 338  Q
    ||||||||||||||| ||||| |||||||| |||||| |||   ||||||| |||||||||||| |||||||||||||||  ||||||| ||||||||    
T  7722760 aagagtttttctaattacaccctgtttaattctggttgcacctcaaaatgataaaattacccttccataaaatttaatttacaaaaagcatcttcctt 7722663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 338
Target Start/End: Complemental strand, 44456899 - 44456802
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcct 337  Q
    |||||||||||||||||| ||||  ||||||||| ||||| ||  | ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  44456899 attaagagtttttctaattacac--tgtttaatc-tggttgcatcctaaaatgataaaattaccctttcataaaatttaattttcaaaaagcatcttcct 44456803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 45505872 - 45505772
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  45505872 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaattttcaaaaagcctattccttct 45505773  T
Q  341 t 341  Q
    |    
T  45505772 t 45505772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 458701 - 458599
Alignment:
Q  237 ttattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||  | ||||||| ||||||| | ||  ||||||||||||||| ||||||| |||||    
T  458701 ttattaagagtttttctaattacactctgtttaatcctggttgcatcctaaaatgataaaattatcattctataaaatttaattttcaaaaagcatcttc 458602  T
Q  336 ctt 338  Q
    |||    
T  458601 ctt 458599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 927062 - 927162
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  927062 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 927161  T
Q  341 t 341  Q
    |    
T  927162 t 927162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 15011817 - 15011917
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  15011817 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 15011916  T
Q  341 t 341  Q
    |    
T  15011917 t 15011917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 34202277 - 34202377
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||||||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| ||||||||    
T  34202277 aagagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 34202376  T
Q  341 t 341  Q
    |    
T  34202377 t 34202377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 1481834 - 1481909
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  1481834 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 1481909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 13196199 - 13196124
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  13196199 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 13196124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 25853494 - 25853419
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  25853494 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 25853419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 43577026 - 43577101
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  43577026 ttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 43577101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 44143383 - 44143458
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  44143383 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 44143458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 1520199 - 1520274
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  1520199 ttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttctt 1520274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 2390748 - 2390673
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  2390748 ttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 2390673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 3178249 - 3178324
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  3178249 ttaatcatggttgcaccctaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttctt 3178324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 10638801 - 10638876
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  10638801 ttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 10638876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 21657950 - 21658025
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  21657950 ttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 21658025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 10554806 - 10554748
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttct 343  Q
    ||||||| |||||||| |||| ||||||||||||||| |||||||||||||||| ||||    
T  10554806 aaaatgataaaattactcttttataaaatttaattttcaaaaagcctcttcctttttct 10554748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 31569711 - 31569649
Alignment:
Q  277 ttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||| | ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  31569711 ttacaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctt 31569649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 42342964 - 42343066
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| |  |||| |  |||||| ||||| ||| | ||||||| || |||| ||||||||||||||| ||||| ||||||||| ||||||    
T  42342964 ttaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattcctt 42343063  T
Q  339 ctt 341  Q
    |||    
T  42343064 ctt 42343066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 27980973 - 27980921
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||||||| | |||||||||| |||| ||||||||||||||||||    
T  27980973 ttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttaat 27980921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 28067503 - 28067451
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||||||| | |||||||||| |||| ||||||||||||||||||    
T  28067503 ttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttaat 28067451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 35895515 - 35895563
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatt 315  Q
    |||||| ||||| ||||| |||||||||| |||||||||||||||||||    
T  35895515 ttaatcatggttgcactccaaaatgacaagattaccctttcataaaatt 35895563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 39697820 - 39697764
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  39697820 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 39697764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 16313668 - 16313573
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||  ||||  |||||||||||  || || || ||||||| |||||||  |||| ||||||||||||||| ||||||| ||||||||    
T  16313668 gagtttttctaactacactctgtttaatcctaattgcattctaaaatgataaaattaatcttttataaaatttaattttcaaaaagcatcttcctt 16313573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 31640882 - 31640795
Alignment:
Q  253 taatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||| ||||| | ||||||| |||| |||||| ||||| | ||||||| |||| ||  |||||||||||| |||||||||||||||||    
T  31640882 taattacaccctctttaatcttggtcacactctaaaataataaaattatccttccaataaatttaattttcaaaaagcctcttccttc 31640795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 40811834 - 40811759
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||||| || |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  40811834 ttaatcatggttgcaccccaaaatgaaaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 40811759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 32551729 - 32551681
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatt 315  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||    
T  32551729 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 36232769 - 36232685
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  36232769 agagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaa 36232685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 338
Target Start/End: Complemental strand, 36885842 - 36885742
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcct 337  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  36885842 attaagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaattttattttcaaaaagcatcttcct 36885743  T
Q  338 t 338  Q
    |    
T  36885742 t 36885742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 38145339 - 38145242
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| ||| | |||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  38145339 aagagtttttctaattacatcctgtttaattctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctt 38145242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 35039572 - 35039667
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| | ||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  35039572 gagtttttctaattacaccctttttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 35039667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 344
Target Start/End: Original strand, 33392510 - 33392612
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||||||| ||||| | |||||||||||||| || | ||||||||||||||||| ||||||||||||||||||| |||||| || |||||| ||    
T  33392510 agagtttttctaattacaccctatttaatcctggttataccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagtcttttccttttt 33392609  T
Q  342 ctc 344  Q
    |||    
T  33392610 ctc 33392612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 7681100 - 7681005
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| | |||||| |||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  7681100 gagtttttctaattacaccctatttaattctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 7681005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 344
Target Start/End: Original strand, 41588879 - 41588977
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttctc 344  Q
    |||||||||||||||||| ||||||||  ||||||||    ||||||| |||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  41588879 agtttttctaatcacaccgtgtttaattttggttacatcttaaaatgataaaattactctttcataaaattt-attttaaaaagcctcttcctttttctc 41588977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 44354596 - 44354512
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||| |||||||||||||||| ||||    
T  44354596 agagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaa 44354512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 48584835 - 48584917
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||| ||||| |||||  ||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  48584835 agttttactaattacacccagtttaatcctggttgtactccaaaatgacaaaattatcctttcataaaatttaattttcaaaa 48584917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 51662258 - 51662164
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||| ||| ||||||||||||||||| ||  | ||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  51662258 agtttttctaattacatcttgtttaatcctggttgcatcctaaaatgataaaattatccttccataaaatttaattttcaaaaagcatcttcctt 51662164  T

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Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 30418684 - 30418785
Alignment:
Q  238 tattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcc 336  Q
    |||| |||||||||||||| ||||| ||||||||| ||| | ||||| ||||||||| ||||| ||||  ||||||||||||||| ||||||| ||||||    
T  30418684 tatttagagtttttctaattacaccctgtttaatcatggctgcactccaaaatgacagaattatccttctataaaatttaattttcaaaaagcatcttcc 30418783  T
Q  337 tt 338  Q
    ||    
T  30418784 tt 30418785  T

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Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 19941681 - 19941777
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||| ||||  |||||||| |||||| ||||| ||||||| |||||||  ||| |||||||||||||||| ||||||| ||||||||    
T  19941681 agagtttttctaattacacactgtttaattctggttgcactctaaaatgataaaattattcttccataaaatttaattttcaaaaagcatcttcctt 19941777  T

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Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 341
Target Start/End: Original strand, 38871106 - 38871218
Alignment:
Q  230 gttaaacttattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaag 328  Q
    |||| |||| ||||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||    
T  38871106 gttacactttttaagagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaag 38871205  T
Q  329 cctcttccttctt 341  Q
    ||| |||||||||    
T  38871206 cctattccttctt 38871218  T

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Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 4596523 - 4596428
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    |||||||||||||| ||| | ||||||||||| ||| ||  | |||||||||||||||||||| ||||||||| | ||| ||||||| ||||||||    
T  4596523 agagtttttctaattacatcctgtttaatcctagttgcatcccaaaatgacaaaattacccttccataaaattaattttcaaaaagcatcttcctt 4596428  T

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Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 11123858 - 11123941
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||||  | ||||||||||||| | | | |||||||||||||||||||| |||||||||||||||| ||||    
T  11123858 gagtttttctaattacactctatttaatcctggttgcgccccaaaatgacaaaattacccttccataaaatttaattttcaaaa 11123941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 47098400 - 47098302
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaa-aaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||||| ||||| ||| |||||||||||| | |||  ||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||    
T  47098400 gagtttttctaattacaccctgtgtaatcctggttata-tcatgaaatgacaaaattacccttgcataaaatttcattttcaaaaagtctcttccttctt 47098302  T

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Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 341
Target Start/End: Complemental strand, 4516115 - 4516013
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||    
T  4516115 ttaagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcctt 4516016  T
Q  339 ctt 341  Q
    |||    
T  4516015 ctt 4516013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 52812121 - 52812222
Alignment:
Q  237 ttattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    ||||| |||||||||||||| ||||| |||||||||||| ||  | || |||||||||||||||  ||| |||||||||||||||| ||||||| |||||    
T  52812121 ttatttagagtttttctaattacaccctgtttaatcctgattgtattc-aaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttc 52812219  T
Q  336 ctt 338  Q
    |||    
T  52812220 ctt 52812222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 2613425 - 2613340
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||| |||||||| ||||| ||||||||| ||||| || |  ||||||| ||||||| ||||||||||||||||||||| ||||    
T  2613425 aagagtatttctaattacaccctgtttaatcttggttgcatttcaaaatgataaaattatcctttcataaaatttaattttcaaaa 2613340  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 342
Target Start/End: Complemental strand, 8947954 - 8947859
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttc 342  Q
    ||||||||||  |||||||| || ||||||||||||||  ||||||||||||||  |||||||| | ||| ||||| ||||||||||||||||||||    
T  8947954 tttttctaattgcaccttgtatattcctggttacactccgaaatgacaaaatta-tctttcatatagtttgattttcaaaaagcctcttccttcttc 8947859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 49779947 - 49779856
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||| |||||| |||||||| ||||| ||  | ||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||    
T  49779947 tttttctaattacacct-gtttaatcttggttgcatcccaaaatgacaaaattatcttttcataaaatttaattttcaaaaagcatcttcctt 49779856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 10841506 - 10841431
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  10841506 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 10841431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 20835656 - 20835581
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  20835656 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 20835581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 25710909 - 25710984
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  25710909 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 25710984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 33712697 - 33712622
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  33712697 ttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 33712622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 36841202 - 36841107
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||| | | |||||||||||||  ||   ||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||    
T  36841202 gagtttttctaattacatcctttttaatcctggttgtacctcaaaatgataaaattacccttccataaaatttaattttcaaaaagcatcttcctt 36841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 52343083 - 52343177
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||| ||| | ||||||||| |||||  |||  |||||||||||||||  ||| |||||||||||||||| ||||||| ||||||||    
T  52343083 agtttttctaattacatcatgtttaatcttggttgaactttaaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttcctt 52343177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 1774036 - 1774133
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttccttctt 341  Q
    |||||||||||| ||| | ||| |||||| |||||||| | |||| || ||||||||| || |||||||||||| ||||||||||  |||||||||||    
T  1774036 agtttttctaattacatcatgtgtaatcccggttacaccccaaaacgataaaattacctttacataaaatttaatttttaaaaagtttcttccttctt 1774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 14279112 - 14279189
Alignment:
Q  250 ttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||| |||||  |||||||||||||| ||| | ||||||||||||||||  || |||||||||||||||| ||||    
T  14279112 ttctaattacaccccgtttaatcctggttgcaccctaaaatgacaaaattacttttccataaaatttaattttcaaaa 14279189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 20657486 - 20657409
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||||| |||||||||| |||||||||||||||||||||||    
T  20657486 aagagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttaat 20657409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 35233747 - 35233678
Alignment:
Q  258 acaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||| ||||||||||||||| || || ||||||| ||||||| |||||||||||||| | |||||||||    
T  35233747 acaccctgtttaatcctggttgcattctaaaatgataaaattatcctttcataaaattaatttttaaaaa 35233678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 7679771 - 7679719
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||||| |||||||||| |||||||||||||||||||||||    
T  7679771 ttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttaat 7679719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 11095647 - 11095742
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactca-aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| | ||||||||||||| || ||| |||||||||||| |||||||  |||| |||||||||| ||||||| ||||||||    
T  11095647 gagtttttctaattacaccctatttaatcctggttgca-tcataaaatgacaaaaatacccttctataatatttaattttcaaaaagcatcttcctt 11095742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 22781962 - 22781906
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  22781962 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 22781906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 39627185 - 39627121
Alignment:
Q  277 ttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttctt 341  Q
    |||||||| ||||||||||||||| ||||| |||||||||| ||||||||||  | |||||||||    
T  39627185 ttacactctaaaatgacaaaattatccttttataaaatttatttttaaaaagtattttccttctt 39627121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 41069877 - 41069933
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  41069877 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 41069933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 4044882 - 4044807
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | ||||| |||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  4044882 ttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 4044807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 10999820 - 10999745
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  10999820 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 10999745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 20048357 - 20048432
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  20048357 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 20048432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 40586245 - 40586170
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  40586245 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 40586170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 53974333 - 53974408
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| ||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  53974333 ttaatcatggttgcaccccaaaatgacaagattacccattcataaaatttgattttcaaaaagcctattccttctt 53974408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 33966892 - 33966993
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||||||||||| |  |||| |  |||||| ||||| ||  | |||||||||| |||||||||||||||||||| ||||| |||||| || |||||||    
T  33966892 taagagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttc 33966991  T
Q  340 tt 341  Q
    ||    
T  33966992 tt 33966993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 84411 - 84463
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  84411 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 84463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 672090 - 672142
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||||| ||||||| || |||||||||||||||||||||||    
T  672090 ttaatcatggttgcactccaaaatgataagattaccctttcataaaatttaat 672142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 6268413 - 6268357
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| ||||||||||| |||||||| ||||| ||||||||| |||||||||    
T  6268413 aaaatgacaagattaccctttcctaaaatttgattttcaaaaagcctattccttctt 6268357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 24395118 - 24395170
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  24395118 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 24395170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 32236155 - 32236207
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  32236155 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 32236207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 337
Target Start/End: Complemental strand, 35155859 - 35155763
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcct 337  Q
    |||| |||||||||| | ||  ||||||||||| ||| ||||  ||||||| ||||||| ||||  ||||||||||||||| ||||||| |||||||    
T  35155859 aagaatttttctaattaaacactgtttaatcctagttgcacttcaaaatgataaaattatccttctataaaatttaattttcaaaaagcatcttcct 35155763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 37971748 - 37971673
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| ||| |||||    
T  37971748 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcattctt 37971673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 54556389 - 54556444
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaattt-aattttaaaaagcctcttccttct 340  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||  ||||||||||    
T  54556389 aaaatgataaaattaccctttcataaaatttgatttttaaaaagtttcttccttct 54556444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 26090198 - 26090276
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||||||||||| |  |||| |  |||||| ||||| |||   |||||||||| |||||||||||||||||||||||    
T  26090198 taagagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttaat 26090276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 18168550 - 18168502
Alignment:
Q  274 tggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt 322  Q
    |||||||| || ||||| ||||||||||||||  |||||||||||||||    
T  18168550 tggttacattctaaaataacaaaattacccttaaataaaatttaatttt 18168502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 20174921 - 20174957
Alignment:
Q  196 taagatcatactaatgaaaattgtatattcataagtt 232  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  20174921 taagatcttactaacgaaaattgtatattcataagtt 20174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 344
Target Start/End: Original strand, 19473937 - 19474037
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttc 342  Q
    |||||||||||||||||||| ||||||||  || |||||||| ||||||||||| ||| ||||||||||||||||||||||||||| || ||||||||||    
T  19473937 agagtttttctaatcacaccctgtttaattttgattacactctaaaatgacaaa-ttatcctttcataaaatttaattttaaaaagtctattccttcttc 19474035  T
Q  343 tc 344  Q
    ||    
T  19474036 tc 19474037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 24980853 - 24980950
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  24980853 aagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctt 24980950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 20492682 - 20492778
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    |||||||||| |||| ||||| || |||||||||||| ||| | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  20492682 aagagtttttataattacaccctgattaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaagcatcttcctt 20492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 12847258 - 12847175
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||||| ||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||| ||||    
T  12847258 gagtttttctaattacaccctgtttaatcctggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaa 12847175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 25764870 - 25764948
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa 318  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||   |||||||||||||||||||| ||||||||||||    
T  25764870 ttaagagtttttctaattacaccatgtataatcctggttacacctcaaaatgacaaaattacccttgcataaaatttaa 25764948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 43775880 - 43775978
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||||| ||| | | ||||||||||||| ||| | ||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  43775880 taagagtttttctaattacatcctatttaatcctggttgcaccccaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttcctt 43775978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 40862357 - 40862454
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| | | | |||||||||||| || ||| | ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  40862357 aagagtttttctaattatatcctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttcctt 40862454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 45870255 - 45870158
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||| ||||| |||||||| |||||| |||   ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  45870255 aagagtttttctaattacaccatgtttaattctggttgcacctcaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctt 45870158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 10594083 - 10594179
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| ||||||||||||||| ||| | ||||| ||| ||||| |||| |||||||||||| ||||||||||| ||||||||    
T  10594083 agagtttttctaattacaccctgtttaatcctggttgcaccccaaaataacagaattaaccttccataaaatttaatttttaaaaagcatcttcctt 10594179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 39597950 - 39597858
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||  ||||| ||||||||||||||| ||| | ||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||    
T  39597950 tttttctaaatacaccctgtttaatcctggttgcaccccaaaatgacaaaattatcctgtcataaaatttaattttcaaaaagcatcttcctt 39597858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 40305557 - 40305474
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||| | |||||||| |||||| |||  |||||||||||||||||||||||| ||||||||||||| ||||    
T  40305557 gagtttttctaattacatcctgtttaattctggttgcacctaaaaatgacaaaattaccctttcaaaaaatttaattttcaaaa 40305474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 47540290 - 47540385
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| |||||||| ||| ||||||| |||||||| ||||||| | || |||||||||||||||| ||||||| ||||||||    
T  47540290 gagtttttctaattacaccctgtttaattctgattacacttaaaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttcctt 47540385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 47546847 - 47546942
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| |||||||| ||| ||||||| |||||||| ||||||| | || |||||||||||||||| ||||||| ||||||||    
T  47546847 gagtttttctaattacaccctgtttaattctgattacacttaaaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttcctt 47546942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 7883761 - 7883665
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactca-aaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    |||||||||||||| ||| | ||||||||||||||| ||| |  ||||||| |||||||||||||||||||||| | ||| ||||||| ||||||||    
T  7883761 agagtttttctaattacatcatgtttaatcctggttgcacccccaaaatgaaaaaattaccctttcataaaattaattttcaaaaagcatcttcctt 7883665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 29042143 - 29042215
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatt 315  Q
    |||||||||||||| ||||||||||||||||| ||| |||   ||||||||||||||| ||||||||||||||    
T  29042143 agagtttttctaattacaccttgtttaatcctagttgcacctcaaaatgacaaaattatcctttcataaaatt 29042215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 341
Target Start/End: Complemental strand, 38876139 - 38876036
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcct 337  Q
    |||||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  38876139 attaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcct 38876040  T
Q  338 tctt 341  Q
    ||||    
T  38876039 tctt 38876036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 8203521 - 8203423
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||| |  ||||||  |||||| ||||| ||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  8203521 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttctt 8203423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 8215998 - 8215900
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||||||||| |  ||||||  |||||| ||||| ||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  8215998 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttctt 8215900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 12428596 - 12428682
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||||| |||| || ||||||||||||| || |  ||||||||||||||| |||| ||| |||||||||||| ||||    
T  12428596 taagagtttttctaattacactttttttaatcctggttgcattttaaaatgacaaaattatccttccatcaaatttaatttttaaaa 12428682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 26015948 - 26015848
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  26015948 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 26015849  T
Q  341 t 341  Q
    |    
T  26015848 t 26015848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 43247039 - 43246939
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  43247039 aagagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 43246940  T
Q  341 t 341  Q
    |    
T  43246939 t 43246939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 7900456 - 7900531
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  7900456 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 7900531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 32542240 - 32542165
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  32542240 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 32542165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 46322103 - 46322028
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  46322103 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 46322028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 46923901 - 46923976
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  46923901 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 46923976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 47065997 - 47065922
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  47065997 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 47065922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 36688820 - 36688725
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttaca-ctcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| | ||||||||| ||| || ||||||| ||||||||||| |||| ||||||||| | ||| ||||||| ||||||||    
T  36688820 agagtttttctaattacaccctctttaatccttgttgcatctcaaaa-tgacaaaattatccttccataaaattaattttcaaaaagcatcttcctt 36688725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 42436588 - 42436496
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||| |||| | ||| ||||||||||||| | ||| | |||||||||| ||||||||| ||||||||||| |||| ||||||| |||||    
T  42436588 gagtttttataattataccctgtttaatcctggctgcaccccaaaatgacaagattacccttccataaaatttagttttcaaaaagcatcttc 42436496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 241685 - 241776
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    |||||||||| ||||| ||||||||| || || |||   ||||||| |||||||||||| ||||||||| | ||| ||||||| ||||||||    
T  241685 tttttctaattacaccctgtttaatcatgcttgcaccttaaaatgataaaattacccttccataaaattaattttcaaaaagcatcttcctt 241776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 7790926 - 7791001
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| |||| |||| |||||||||    
T  7790926 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaatgcctattccttctt 7791001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 38283648 - 38283573
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  38283648 ttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttctt 38283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 46101804 - 46101899
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||| |||| ||||| || ||||||||| || ||||  ||||||||||||||| | ||  ||||||||||||||| ||||||| ||||||||    
T  46101804 gagtttttttaattacaccctgcttaatcctgattgcactttaaaatgacaaaattatctttctataaaatttaattttcaaaaagcatcttcctt 46101899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 47779566 - 47779491
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  47779566 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 47779491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 48612861 - 48612944
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| | ||  |||||||| ||||||||||   ||||||| ||||||| |||| |||||||||||||||| ||||    
T  48612861 gagtttttctaattagactctgtttaattctggttacaccttaaaatgataaaattatccttccataaaatttaatttttaaaa 48612944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 21279156 - 21279051
Alignment:
Q  237 ttattaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||| ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||| | |||    
T  21279156 ttatgaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattc 21279057  T
Q  336 cttctt 341  Q
    ||||||    
T  21279056 cttctt 21279051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 30173548 - 30173463
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||| | ||| | ||||||| ||||| || |  ||||||||||||||||| ||  ||||||||||||||| ||||    
T  30173548 aagagtttttctaattataccctatttaatcttggttgcatttcaaaatgacaaaattacctttctataaaatttaattttcaaaa 30173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 341
Target Start/End: Complemental strand, 32662451 - 32662350
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||| ||||||||||||| ||||| |||||| || |||||||    
T  32662451 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagtctattccttc 32662352  T
Q  340 tt 341  Q
    ||    
T  32662351 tt 32662350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 39074438 - 39074361
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  39074438 aagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttaat 39074361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 40705569 - 40705496
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||| ||||| ||| | |||||||||| ||| |||||||||||||||| ||||| ||||||||| |||||||    
T  40705569 ttaatcatggttgcaccccaaaatgacaagattgccctttcataaaatttgattttcaaaaagcctattccttc 40705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 25066648 - 25066568
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt 322  Q
    |||| |||||||| | ||||| | |||||| || ||||||| | ||||||||||||||| |||||  ||||||||||||||    
T  25066648 aagaatttttctagttacaccctatttaattcttgttacaccctaaaatgacaaaattatcctttagtaaaatttaatttt 25066568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 27324985 - 27325053
Alignment:
Q  274 tggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||| ||||| ||||||| || |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  27324985 tggttgcactccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattccttctt 27325053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 34591671 - 34591771
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcct 337  Q
    |||||||||||||||| |  |||| |  |||||| ||||| |||   |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||    
T  34591671 attaagagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 34591770  T
Q  338 t 338  Q
    |    
T  34591771 t 34591771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 35924253 - 35924313
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||    
T  35924253 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaa 35924313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 42095831 - 42095779
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  42095831 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 42095779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 43047143 - 43047091
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  43047143 ttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttaat 43047091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 48641965 - 48642020
Alignment:
Q  274 tggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagc 329  Q
    ||||||||| | |||| ||||||||||| |||||||| |||||| |||||||||||    
T  48641965 tggttacaccccaaaacgacaaaattactctttcatagaatttatttttaaaaagc 48642020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 25225512 - 25225600
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||| || | ||  ||||||||| ||||| ||||  |||||||||| |||| | ||  ||||||||||||||| ||||    
T  25225512 attaagagtttttcttattatacgctgtttaatcttggttgcactttaaaatgacaatattatctttctataaaatttaattttcaaaa 25225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 39598615 - 39598531
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaag 328  Q
    ||||||||||||| ||||| |||||||| ||||||  |||  ||||||| ||| ||||| || ||||||||| | ||| ||||||    
T  39598615 gagtttttctaattacaccctgtttaattctggttgtactttaaaatgataaatttacctttccataaaattaattttcaaaaag 39598531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 18024376 - 18024477
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||||||||||||| ||||| |||||||| ||||||||| || |||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||    
T  18024376 taagagtttttctaattacaccctgtttaattctggttacattctaaaatgacaaaattgccctttcataaaatctaattttgaaaaagcttcttccttc 18024475  T
Q  340 tt 341  Q
    ||    
T  18024476 tt 18024477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 6925773 - 6925872
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||||||| ||||| |||||||||||| || ||| | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  6925773 ttaagagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 6925872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 31091234 - 31091151
Alignment:
Q  239 attaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt 322  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||    
T  31091234 attaagagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaatttt 31091151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 32173794 - 32173693
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt--aaaaagcctcttccttcttc 342  Q
    |||||||||||| ||||| |||||||| |||||||||  | ||||||||||||||||| ||| |||||||||||||||  |||||||||||||||| |||    
T  32173794 agtttttctaattacaccctgtttaattctggttacatcccaaaatgacaaaattaccattttataaaatttaattttcaaaaaagcctcttcctttttc 32173695  T
Q  343 tc 344  Q
    ||    
T  32173694 tc 32173693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 23350353 - 23350449
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| ||||||||||||||| ||| | |||||||  |||||| |||| |||||||||||||||| ||||||| ||||||||    
T  23350353 agagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgatcaaattatccttccataaaatttaattttcaaaaagcatcttcctt 23350449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 34085927 - 34085833
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||| |||| ||||| ||| ||||||||||| ||| | ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  34085927 agtttttttaattacaccctgtgtaatcctggttgcaccccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctt 34085833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 7080968 - 7081070
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||| |||||||||| ||||  ||| || |||||||||||| | ||||||| ||||||| ||||  ||||||||| ||||| ||||||||||||||||    
T  7080968 ttaagaatttttctaattacacactgtatattcctggttacaccccaaaatgataaaattatccttagataaaatttgattttcaaaaagcctcttcctt 7081067  T
Q  339 ctt 341  Q
    |||    
T  7081068 ctt 7081070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 6625355 - 6625456
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||||||||||| | ||||| |  |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||    
T  6625355 taagagtttttctacttacaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 6625454  T
Q  340 tt 341  Q
    ||    
T  6625455 tt 6625456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 8525525 - 8525617
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    ||||||||||||| ||||  |||||||| |||||| ||  | ||||||| |||||||||||| |||||||||||||||| ||||||| |||||    
T  8525525 gagtttttctaattacacactgtttaattctggttgcatcccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatcttc 8525617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 11369165 - 11369081
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||| ||||||||| ||||| |||   |||||||||||||||| |||  ||||||||||||||| ||||    
T  11369165 agagtttttctaattacaccctgtttaatcttggttgcacctcaaaatgacaaaattactcttctataaaatttaattttcaaaa 11369081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 8811391 - 8811292
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||| |||||||||| |||||  || || |||||||||||| | ||||||| ||||||| |||| |||||||||| ||||| ||||||| ||||||||    
T  8811391 ttaagaatttttctaattacaccccgtatattcctggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttcctt 8811292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 29122415 - 29122340
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  29122415 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 29122340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 5714880 - 5714969
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||||| ||| | || || || |||||| ||||  ||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  5714880 tttttctaattacatcctgattgattctggttgcacttcaaaataacaaaattaccctttcataaaatttaattttcaaaaagcatcttc 5714969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 13890044 - 13889944
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | ||||| |||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  13890044 aagagtttttctacttgcaccctaattaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 13889945  T
Q  341 t 341  Q
    |    
T  13889944 t 13889944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 3094611 - 3094686
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  3094611 ttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttctt 3094686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 6167997 - 6167922
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  6167997 ttaatcatggttgcaccctaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttctt 6167922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 18893698 - 18893773
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||||||| | |||||||||| |||| ||||||||||||||| ||||| ||||||| | |||||||||    
T  18893698 ttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattccttctt 18893773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 29630557 - 29630482
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  29630557 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 29630482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 29623242 - 29623173
Alignment:
Q  258 acaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||| ||||||||||||||| |||   ||||||||||||||| | || |||||||||||||||| ||||    
T  29623242 acaccatgtttaatcctggttgcaccttaaaatgacaaaattatctttccataaaatttaattttcaaaa 29623173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 13445464 - 13445403
Alignment:
Q  266 tttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||  | |||||||||||||||| |||  ||||||||||||||| ||||    
T  13445464 tttaatcctggttgcatcctaaaatgacaaaattactcttctataaaatttaattttcaaaa 13445403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 7141305 - 7141361
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    ||||| |||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  7141305 aaaataacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 7141361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 8011025 - 8011061
Alignment:
Q  196 taagatcatactaatgaaaattgtatattcataagtt 232  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  8011025 taagatcttactaacgaaaattgtatattcataagtt 8011061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 25335180 - 25335124
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||| ||||||||||||||| ||||| ||||||| | |||||||||    
T  25335180 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcttattccttctt 25335124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 31793933 - 31793838
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  31793933 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 31793838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 39712697 - 39712777
Alignment:
Q  264 tgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttcttctc 344  Q
    ||||||||||||||||||  | ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  39712697 tgtttaatcctggttacatcctaaaatgataaaattatcttttcataaaatttaattttaaaaagcctcttccttcttctc 39712777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 5347560 - 5347466
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcctt 338  Q
    |||||||||||| ||| | |||||||||||||||||||   ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  5347560 agtttttctaattacatcctgtttaatcctggttacaccttaaaatgataaaattaccctttcataaaatttaagtttcaaaaagcctcttcctt 5347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 12722559 - 12722648
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    |||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  12722559 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 12722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 35329813 - 35329720
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctctt 334  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||| |||| ||||||||| | ||| ||||||| ||||    
T  35329813 taagagtttttctaattacaccatgtttaatcctggttgcactccaaaatgacaaaattatccttccataaaattaattttcaaaaagcatctt 35329720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 42688025 - 42687930
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaa-ttttaaaaagcctcttcctt 338  Q
    ||||||||||||| ||||  ||||||||| ||||| ||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  42688025 gagtttttctaattacactctgtttaatcttggttgcaccccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttcctt 42687930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 41942448 - 41942362
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||||| ||||| ||||||||||||||| ||  | ||||||||||||||| |||| |||||||||||||||| ||||    
T  41942448 taagagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattatccttccataaaatttaattttcaaaa 41942362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 4005764 - 4005860
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| |||||||||||||||  |    |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  4005764 agagtttttctaattacaccctgtttaatcctggttgtatcttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 4005860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 36057817 - 36057721
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| |||||||| |||||| ||| | ||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||    
T  36057817 agagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcctt 36057721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 38945688 - 38945771
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||| ||||  ||||||||||||||| ||| | ||||||||||||||| |||| |||||||||||||||| ||||    
T  38945688 gagtttttctaattacacaatgtttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaa 38945771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 7970114 - 7970020
Alignment:
Q  247 tttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttccttctt 341  Q
    |||||||||| ||||| | | || | ||| |||||| | ||||||||||||||||| |||||||||||||| |||||||||| || |||||||||    
T  7970114 tttttctaattacaccctttatatttctgattacaccctaaaatgacaaaattaccttttcataaaatttatttttaaaaagtcttttccttctt 7970020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 335
Target Start/End: Complemental strand, 2828402 - 2828306
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 335  Q
    ||||||||||||||||| ||||| ||| ||||||| ||||||||  | ||||||||||||||  |  |||| ||||||||||| |||||||||||||    
T  2828402 ttaagagtttttctaattacaccctgtataatcctagttacactttagaatgacaaaattactttggcatagaatttaattttcaaaaagcctcttc 2828306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 17601333 - 17601409
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    ||||||||||||||  ||||||  |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  17601333 agagtttttctaattgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 17601409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 38234416 - 38234500
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||| | |||||||||| || ||||  ||||||||||||| | |||| |||||||||||||||| ||||    
T  38234416 agagtttttctaattacaccctatttaatcctgtttgcacttcaaaatgacaaaatgatccttccataaaatttaatttttaaaa 38234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 22439666 - 22439591
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| |||||||||   |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  22439666 ttaatcatggttacacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 22439591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 24822784 - 24822709
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  24822784 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 24822709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 341
Target Start/End: Original strand, 35605336 - 35605435
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||||| | ||||| |  |||||| ||||| |||   |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  35605336 agagtttttctacttacaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 35605435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 38460186 - 38460091
Alignment:
Q  243 agagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaagcctcttcctt 338  Q
    |||||||||||||| ||||| || |||||||||||| |||   ||||||||||||||||||||  |||||||| | |||  |||||| ||||||||    
T  38460186 agagtttttctaattacaccctgattaatcctggttgcacctcaaaatgacaaaattacccttctataaaattaattttcgaaaagcatcttcctt 38460091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 39365269 - 39365344
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  39365269 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 39365344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 4229637 - 4229719
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||| ||| | ||||||||||||||| || |  ||||||||| ||||| |||| |||||||||||||||| ||||    
T  4229637 agtttttctaattacatcctgtttaatcctggttgcatttcaaaatgacagaattatccttccataaaatttaattttcaaaa 4229719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 38168571 - 38168486
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||| |||| ||||  | |||| || ||||| ||||| ||||||| |||||||||||| |||||||||||||||| ||||    
T  38168571 aagagtttttttaattacacaatttttattcttggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaa 38168486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 3137310 - 3137210
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | ||||||||    
T  3137310 aagagtttttctacttgcaccgtagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttct 3137211  T
Q  341 t 341  Q
    |    
T  3137210 t 3137210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 8013985 - 8013933
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||||| |||||||||| |||||||||||||||||||||||    
T  8013985 ttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttaat 8013933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 17122088 - 17122188
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | ||||| |||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  17122088 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 17122187  T
Q  341 t 341  Q
    |    
T  17122188 t 17122188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 37578006 - 37578058
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||||| |||||||||| |||||||||||||||||||||||    
T  37578006 ttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttaat 37578058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 42512201 - 42512257
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  42512201 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 42512257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 43664366 - 43664310
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  43664366 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 43664310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 5988211 - 5988286
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||    
T  5988211 ttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttctt 5988286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 8376263 - 8376338
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| |||||| || |||||||||    
T  8376263 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctt 8376338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 23357317 - 23357242
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  23357317 ttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttctt 23357242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 26290839 - 26290764
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||  |||||||||    
T  26290839 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 26290764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 26304096 - 26304021
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||  |||||||||    
T  26304096 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 26304021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 26337451 - 26337376
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||  |||||||||    
T  26337451 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 26337376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 5599947 - 5599869
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||||||||||| |  |||| |  |||||| ||||| || || |||||||||| |||||||||||||||||||||||    
T  5599947 taagagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaatttaat 5599869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 5640673 - 5640751
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||||||||||| |  |||| |  |||||| ||||| || || |||||||||| |||||||||||||||||||||||    
T  5640673 taagagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaatttaat 5640751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 11266134 - 11266228
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||| |||| |||| |||||||||||||||| |||   ||||||| || ||||| |||  ||||||||||||||| ||||||| ||||||||    
T  11266134 agtttttttaattacactttgtttaatcctggttgcacctcaaaatgataagattactcttctataaaatttaattttcaaaaagcatcttcctt 11266228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 28885798 - 28885720
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  28885798 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 28885720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 11587896 - 11587973
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  11587896 aagagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 11587973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 3032983 - 3032883
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| ||||||||||||||| |||| ||||| ||||||||| || |||||    
T  3032983 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataacatttgattttcaaaaagcctatttcttct 3032884  T
Q  341 t 341  Q
    |    
T  3032883 t 3032883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 15839478 - 15839530
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  15839478 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 15839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 26122611 - 26122511
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | ||||||| || |||||||||||||||||||| ||||| ||||||| | ||||||||    
T  26122611 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcatattccttct 26122512  T
Q  341 t 341  Q
    |    
T  26122511 t 26122511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 28909685 - 28909737
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  28909685 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 28909737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 34917580 - 34917636
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| || |||||||||    
T  34917580 aaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctt 34917636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 8656577 - 8656652
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||  |||||||||||| |||| ||||||||||||||| ||||| |||||| || |||||||||    
T  8656577 ttaatcatggttgcaaccaaaaatgacaagattaacctttcataaaatttgattttcaaaaagtctattccttctt 8656652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 16571291 - 16571248
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaattttaaaaagc 329  Q
    |||||||||||| |||||||||||||| |||| |||||||||||    
T  16571291 aaaatgacaaaactaccctttcataaagtttatttttaaaaagc 16571248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 2669770 - 2669717
Alignment:
Q  178 gcttttatgttagatcattaagatcatactaatgaaaattgtatattcataagtt 232  Q
    ||||||||||||  |||| |||||| |||||||||||| ||||||||||||||||    
T  2669770 gcttttatgttaattcat-aagatcctactaatgaaaaatgtatattcataagtt 2669717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 5552 - 5593
Alignment:
Q  286 aaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    ||||||||||||||| |||| |||||||||||||||| ||||    
T  5552 aaaatgacaaaattatccttccataaaatttaattttcaaaa 5593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 2563491 - 2563427
Alignment:
Q  167 caaatagtaatgcttttatgttagatcattaagatcatactaatgaaaattgtatattcataagtt 232  Q
    |||||| | ||||||||||||||  |||| |||||| ||||||| ||||||||||||||| |||||    
T  2563491 caaataattatgcttttatgttaattcat-aagatcttactaataaaaattgtatattcaaaagtt 2563427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 9782288 - 9782252
Alignment:
Q  196 taagatcatactaatgaaaattgtatattcataagtt 232  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  9782288 taagatcttactaacgaaaattgtatattcataagtt 9782252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 8719 - 8813
Alignment:
Q  245 agtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||||||||| ||||| ||||||||||||||| ||    ||||| |||||||||| ||| |||||||||||||||| ||||||| ||||||||    
T  8719 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttcctt 8813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 3872 - 3973
Alignment:
Q  241 taagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc 339  Q
    |||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||    
T  3872 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 3971  T
Q  340 tt 341  Q
    ||    
T  3972 tt 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 13860 - 13960
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  13860 aagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 13959  T
Q  341 t 341  Q
    |    
T  13960 t 13960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 3838 - 3739
Alignment:
Q  240 ttaagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    |||||| |||||||||| |||||  || || |||||||||||| | ||||||| ||||||| |||| |||||||||| ||||| ||||||| ||||||||    
T  3838 ttaagaatttttctaattacaccccgtatattcctggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttcctt 3739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 12543 - 12618
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  12543 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 12618  T

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Target: scaffold0276; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 14135 - 14035
Alignment:
Q  242 aagagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttct 340  Q
    ||||||||||||| |  |||| |  |||||| ||||| ||| | ||||| | || |||| ||||||||||||||| ||||| ||||||||| ||||||||    
T  14135 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaattataagattatcctttcataaaatttgattttcaaaaagcctattccttct 14036  T
Q  341 t 341  Q
    |    
T  14035 t 14035  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 157176 - 157101
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| |||  ||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  157176 ttaatcatggttgcaccaaaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 157101  T

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Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 200033 - 200116
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||| |||| ||| | ||||||||||||| | ||  | |||||||||||||||||||| |||||||||||||||| ||||    
T  200033 gagtttttttaattacatcctgtttaatcctggatgcatcccaaaatgacaaaattacccttccataaaatttaattttcaaaa 200116  T

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Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 38473 - 38421
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaat 319  Q
    |||||| ||||| ||||| |||||||||| |||||||||||||||||||||||    
T  38473 ttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttaat 38421  T

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Target: scaffold0438 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 2176 - 2101
Alignment:
Q  267 ttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 341  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||||||||| ||||| ||||||||  |||||||||    
T  2176 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 2101  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 365935 - 365840
Alignment:
Q  244 gagtttttctaatcacaccttgtttaatcctggttacactcaaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttcctt 338  Q
    ||||||||| ||  ||||| |||||||| |||||| |||   || |||||||||| ||| || |||||||||||||||| ||||||| ||||||||    
T  365935 gagtttttcaaactacaccctgtttaattctggttgcacctcaacatgacaaaatgacctttccataaaatttaattttcaaaaagcatcttcctt 365840  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 12554 - 12592
Alignment:
Q  289 atgacaaaattaccctttcataaaatttaattttaaaaa 327  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  12554 atgacaaaattaccttttcataaaatttaatttttaaaa 12592  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 227829 - 227778
Alignment:
Q  178 gcttttatgttagatcattaagatcatactaatgaaaattgtatattcataag 230  Q
    ||||||||||||  |||| |||||| |||||| ||||||||||||||||||||    
T  227829 gcttttatgttaattcat-aagatcttactaacgaaaattgtatattcataag 227778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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