View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16326_high_1 (Length: 255)
Name: NF16326_high_1
Description: NF16326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16326_high_1 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 4497928 - 4498169
Alignment:
| Q |
8 |
tcatcatttaaatacaatttgtcttccaatcggtcaatggctgatagttttatccttggtttttaaatgaaatgagtctggcaacaccattggatgtgtt |
107 |
Q |
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| T |
4497928 |
tcatcatttaaatacaatt-gtcttccaatcggtcaatggctgatagttttatccttggtttttaaatgaaatgagtctggcaacaccattggatgtgtt |
4498026 |
T |
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| Q |
108 |
actcaataaccaattacttaggcactttgacaagggattatttaactgcccctataatcggttatttttctgctgtgttgttccaaatgtctgtgctagt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4498027 |
actcaataaccaattacttaggcactttgacaagggattatttaactgcccctataatcggttatttttctgctgtgttgttccaaatgtctgtgctagt |
4498126 |
T |
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| Q |
208 |
aacaatgctatcatgatagagtagactttaggtttcatgtcac |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4498127 |
aacaatgctatcatgatagagtagactttaggtttcatgtcac |
4498169 |
T |
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