View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16327_high_1 (Length: 369)

Name: NF16327_high_1
Description: NF16327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16327_high_1
NF16327_high_1
[»] chr2 (23 HSPs)
chr2 (12-349)||(13266598-13266936)
chr2 (270-342)||(25293273-25293347)
chr2 (262-349)||(34516415-34516502)
chr2 (270-350)||(44946062-44946143)
chr2 (262-349)||(3943848-3943936)
chr2 (266-349)||(4769274-4769358)
chr2 (270-349)||(11941219-11941299)
chr2 (270-349)||(15038067-15038147)
chr2 (270-349)||(28668981-28669061)
chr2 (270-349)||(35171908-35171988)
chr2 (270-349)||(36242321-36242401)
chr2 (270-324)||(18976464-18976518)
chr2 (284-349)||(10582015-10582079)
chr2 (262-322)||(19605847-19605907)
chr2 (270-349)||(30466839-30466919)
chr2 (270-349)||(33827582-33827662)
chr2 (268-334)||(8024677-8024744)
chr2 (270-348)||(8192361-8192439)
chr2 (284-350)||(24196111-24196176)
chr2 (270-323)||(14486960-14487013)
chr2 (262-338)||(4852649-4852725)
chr2 (270-322)||(18692096-18692148)
chr2 (274-349)||(19849941-19850017)
[»] chr5 (32 HSPs)
chr5 (270-342)||(11464917-11464989)
chr5 (262-349)||(6014281-6014369)
chr5 (270-349)||(19456220-19456299)
chr5 (262-349)||(5049245-5049332)
chr5 (270-349)||(41351113-41351192)
chr5 (270-349)||(11926510-11926591)
chr5 (270-349)||(8484670-8484750)
chr5 (262-349)||(10869566-10869654)
chr5 (270-349)||(27498740-27498820)
chr5 (270-349)||(32059449-32059529)
chr5 (270-349)||(38684316-38684395)
chr5 (270-342)||(13038464-13038537)
chr5 (270-324)||(7151437-7151491)
chr5 (270-339)||(13108459-13108529)
chr5 (270-349)||(27487563-27487644)
chr5 (270-342)||(4603892-4603965)
chr5 (270-342)||(18207322-18207395)
chr5 (270-338)||(22693054-22693123)
chr5 (270-342)||(35425128-35425201)
chr5 (270-349)||(15641115-15641194)
chr5 (270-349)||(31287955-31288035)
chr5 (77-132)||(34272303-34272358)
chr5 (262-308)||(930487-930533)
chr5 (270-324)||(37495188-37495242)
chr5 (270-350)||(13659254-13659335)
chr5 (270-334)||(21377258-21377323)
chr5 (270-334)||(24158175-24158240)
chr5 (270-342)||(33709512-33709585)
chr5 (270-349)||(22392796-22392876)
chr5 (262-349)||(23270523-23270611)
chr5 (270-322)||(25750622-25750674)
chr5 (270-349)||(30485936-30486016)
[»] chr3 (42 HSPs)
chr3 (270-349)||(32151532-32151612)
chr3 (270-349)||(18176896-18176976)
chr3 (270-349)||(40133458-40133538)
chr3 (270-349)||(24165724-24165803)
chr3 (270-349)||(52821645-52821724)
chr3 (262-342)||(31537839-31537920)
chr3 (270-342)||(55371303-55371376)
chr3 (270-349)||(25289724-25289803)
chr3 (270-349)||(39041861-39041941)
chr3 (270-349)||(48977496-48977576)
chr3 (270-349)||(15566509-15566588)
chr3 (270-348)||(24407370-24407449)
chr3 (262-349)||(53288714-53288801)
chr3 (270-347)||(8097288-8097366)
chr3 (270-348)||(39890615-39890693)
chr3 (270-348)||(53424186-53424264)
chr3 (270-350)||(48104984-48105065)
chr3 (270-349)||(10190751-10190831)
chr3 (270-349)||(25379869-25379949)
chr3 (270-349)||(33398477-33398557)
chr3 (270-349)||(49258271-49258351)
chr3 (270-349)||(54475789-54475869)
chr3 (279-342)||(29915288-29915351)
chr3 (279-342)||(29964441-29964504)
chr3 (271-348)||(33698716-33698794)
chr3 (276-349)||(35493019-35493093)
chr3 (270-349)||(8456159-8456239)
chr3 (270-349)||(10083828-10083908)
chr3 (270-349)||(26174221-26174301)
chr3 (270-349)||(30257732-30257812)
chr3 (270-349)||(45272425-45272505)
chr3 (270-349)||(46576456-46576536)
chr3 (270-308)||(4252405-4252443)
chr3 (262-349)||(17579136-17579225)
chr3 (270-349)||(30807162-30807242)
chr3 (270-324)||(53848443-53848497)
chr3 (270-349)||(21363051-21363131)
chr3 (270-349)||(45529764-45529843)
chr3 (270-322)||(50731246-50731298)
chr3 (270-322)||(50781556-50781608)
chr3 (270-349)||(52455658-52455738)
chr3 (270-349)||(53233920-53233999)
[»] chr1 (27 HSPs)
chr1 (270-349)||(15059411-15059491)
chr1 (270-349)||(4621246-4621326)
chr1 (270-349)||(24122131-24122211)
chr1 (270-349)||(24674501-24674581)
chr1 (270-348)||(17935878-17935957)
chr1 (270-350)||(1379005-1379085)
chr1 (270-349)||(7197256-7197336)
chr1 (262-349)||(7766728-7766816)
chr1 (262-349)||(9500356-9500444)
chr1 (270-342)||(37351462-37351534)
chr1 (270-349)||(1818817-1818896)
chr1 (270-348)||(34778448-34778527)
chr1 (274-349)||(40802082-40802157)
chr1 (270-350)||(8254761-8254842)
chr1 (270-349)||(7578517-7578597)
chr1 (262-338)||(27159205-27159281)
chr1 (270-322)||(40145890-40145942)
chr1 (262-341)||(48699875-48699955)
chr1 (270-348)||(18646962-18647041)
chr1 (287-341)||(3272943-3272997)
chr1 (299-349)||(7946952-7947002)
chr1 (270-308)||(23041672-23041710)
chr1 (262-324)||(46607944-46608006)
chr1 (270-334)||(16539731-16539795)
chr1 (270-349)||(27454873-27454955)
chr1 (262-349)||(30677284-30677372)
chr1 (270-349)||(36155897-36155977)
[»] chr7 (34 HSPs)
chr7 (270-349)||(28089932-28090011)
chr7 (270-349)||(17196959-17197039)
chr7 (262-349)||(21835263-21835351)
chr7 (270-349)||(31274026-31274105)
chr7 (58-117)||(42863660-42863719)
chr7 (270-349)||(11997961-11998041)
chr7 (270-349)||(22120000-22120080)
chr7 (270-349)||(22638400-22638480)
chr7 (270-349)||(40542919-40542999)
chr7 (270-349)||(654714-654793)
chr7 (12-107)||(32471196-32471295)
chr7 (262-340)||(33137826-33137904)
chr7 (270-350)||(29861781-29861862)
chr7 (270-349)||(2751383-2751463)
chr7 (270-349)||(3851869-3851949)
chr7 (270-349)||(7275389-7275469)
chr7 (270-348)||(23330748-23330827)
chr7 (262-349)||(39145653-39145740)
chr7 (270-327)||(31712911-31712968)
chr7 (270-349)||(7175871-7175951)
chr7 (270-349)||(18044219-18044299)
chr7 (270-349)||(22703598-22703678)
chr7 (198-246)||(24934737-24934785)
chr7 (262-349)||(31197702-31197790)
chr7 (270-344)||(2344416-2344491)
chr7 (270-324)||(8943410-8943464)
chr7 (270-311)||(21574111-21574152)
chr7 (273-334)||(37056334-37056394)
chr7 (270-350)||(42913522-42913603)
chr7 (270-338)||(43785308-43785377)
chr7 (270-349)||(23092208-23092288)
chr7 (262-322)||(28647109-28647169)
chr7 (270-349)||(28950983-28951063)
chr7 (84-136)||(39773225-39773277)
[»] chr8 (33 HSPs)
chr8 (270-349)||(19471721-19471802)
chr8 (270-349)||(19542645-19542726)
chr8 (270-349)||(19589970-19590051)
chr8 (270-349)||(20306020-20306100)
chr8 (270-349)||(21092653-21092733)
chr8 (270-349)||(4718757-4718837)
chr8 (270-349)||(8765535-8765615)
chr8 (270-349)||(21603342-21603422)
chr8 (262-349)||(39349368-39349456)
chr8 (270-349)||(42328116-42328196)
chr8 (270-349)||(264409-264488)
chr8 (270-349)||(651433-651512)
chr8 (270-349)||(837168-837247)
chr8 (270-348)||(2639420-2639499)
chr8 (271-349)||(15259416-15259495)
chr8 (192-246)||(3036545-3036599)
chr8 (284-348)||(25248461-25248525)
chr8 (270-349)||(28193586-28193666)
chr8 (270-349)||(34237664-34237744)
chr8 (271-349)||(2618298-2618377)
chr8 (195-246)||(3049117-3049168)
chr8 (64-107)||(11364692-11364735)
chr8 (274-327)||(26168862-26168915)
chr8 (270-349)||(3734632-3734712)
chr8 (270-349)||(34610696-34610776)
chr8 (195-246)||(29912128-29912179)
chr8 (198-244)||(15808741-15808787)
chr8 (262-349)||(24018494-24018583)
chr8 (273-342)||(28908942-28909012)
chr8 (274-342)||(28964152-28964220)
chr8 (270-331)||(42643127-42643188)
chr8 (270-342)||(7557960-7558032)
chr8 (262-322)||(14633094-14633154)
[»] chr6 (21 HSPs)
chr6 (270-349)||(3222645-3222724)
chr6 (262-342)||(9844053-9844134)
chr6 (270-349)||(9239083-9239163)
chr6 (262-349)||(11448979-11449067)
chr6 (270-349)||(21148520-21148599)
chr6 (270-349)||(654155-654235)
chr6 (270-349)||(15360107-15360187)
chr6 (270-349)||(21982330-21982409)
chr6 (270-349)||(28672175-28672255)
chr6 (270-349)||(34147454-34147534)
chr6 (270-349)||(34160070-34160150)
chr6 (270-340)||(14212999-14213070)
chr6 (266-338)||(33718474-33718547)
chr6 (270-349)||(9690647-9690727)
chr6 (268-327)||(8479428-8479487)
chr6 (270-349)||(11841009-11841088)
chr6 (77-131)||(6919383-6919437)
chr6 (197-246)||(6067581-6067630)
chr6 (270-349)||(1345043-1345123)
chr6 (270-322)||(5360080-5360132)
chr6 (270-349)||(17149465-17149545)
[»] chr4 (31 HSPs)
chr4 (267-349)||(9517647-9517730)
chr4 (270-349)||(27528804-27528884)
chr4 (270-349)||(34723907-34723987)
chr4 (270-349)||(34844767-34844847)
chr4 (270-349)||(40058861-40058941)
chr4 (270-349)||(52983727-52983807)
chr4 (270-337)||(52494609-52494676)
chr4 (270-347)||(13771491-13771569)
chr4 (270-348)||(49287967-49288045)
chr4 (262-349)||(20566458-20566546)
chr4 (262-349)||(33696280-33696368)
chr4 (270-349)||(44343622-44343702)
chr4 (270-349)||(45787713-45787793)
chr4 (262-321)||(7093508-7093567)
chr4 (270-342)||(51535735-51535809)
chr4 (262-348)||(28791224-28791310)
chr4 (262-342)||(22488029-22488110)
chr4 (270-349)||(4912034-4912114)
chr4 (270-349)||(19660541-19660621)
chr4 (270-350)||(25969512-25969591)
chr4 (274-349)||(32990543-32990619)
chr4 (270-349)||(54127351-54127431)
chr4 (270-308)||(12824550-12824588)
chr4 (270-308)||(35229318-35229356)
chr4 (216-246)||(44369014-44369044)
chr4 (284-349)||(4585736-4585800)
chr4 (268-313)||(13781131-13781176)
chr4 (270-349)||(5609211-5609291)
chr4 (270-349)||(20077993-20078073)
chr4 (270-349)||(27574426-27574506)
chr4 (270-349)||(32986305-32986385)
[»] scaffold0217 (1 HSPs)
scaffold0217 (262-342)||(7310-7391)
[»] scaffold0049 (1 HSPs)
scaffold0049 (270-349)||(66862-66942)
[»] scaffold0576 (1 HSPs)
scaffold0576 (270-349)||(5091-5171)
[»] scaffold0070 (1 HSPs)
scaffold0070 (270-349)||(40433-40512)
[»] scaffold0102 (1 HSPs)
scaffold0102 (270-342)||(39207-39280)
[»] scaffold1175 (1 HSPs)
scaffold1175 (270-349)||(2435-2515)
[»] scaffold0068 (1 HSPs)
scaffold0068 (270-349)||(41654-41733)
[»] scaffold0171 (1 HSPs)
scaffold0171 (262-342)||(11421-11502)
[»] scaffold0623 (1 HSPs)
scaffold0623 (270-349)||(1066-1145)
[»] scaffold0366 (1 HSPs)
scaffold0366 (270-349)||(9309-9388)
[»] scaffold0016 (1 HSPs)
scaffold0016 (270-349)||(32396-32475)


Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 12 - 349
Target Start/End: Complemental strand, 13266936 - 13266598
Alignment:
Q  12 caaagggagagaggagagacttcaccaatattcttcctatcccttaagtgtccatcattcctctgtttatgcacaatccaagcttccttaattttaaaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13266936 caaagggagagaggagagacttcaccaatattcttcctatcccttaagtgtccatcattcctctatttatgcacaatccaagcttccttaattttaaaat 13266837  T
Q  112 tactagtcacatgtccatttatctcgactataatattacgtcaaatgtgtatttcttcatatgttatgtcaaatcataatagacacttgataagaagttt 211  Q
    |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13266836 tactagccacatgtccatttatctcgactataaaattacgtcaagtgtgtatttcttcatatgttatgtcaaatcataatagacacttgataagaagttt 13266737  T
Q  212 agagtatcaactttatcttaaaaattgtgtattcacc-nnnnnnnnnnnnnaaacttgatatccgatccaaggatcgactaattcgatgggaccaatctc 310  Q
    | |||||||||||||||||||||||||||||||||||              ||||| ||||||||||||||| ||||||||||| || |||||||||| |    
T  13266736 aaagtatcaactttatcttaaaaattgtgtattcaccttttttttttaaaaaaactcgatatccgatccaagaatcgactaatttgaggggaccaatccc 13266637  T
Q  311 atcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    || ||||||||||| ||||||||||||||||| ||||||    
T  13266636 attacccacttgcggggccccgtttaaagccagagcaag 13266598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 25293347 - 25293273
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagcca 342  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||| |||||||||  | |||||||||||||||||    
T  25293347 tatccgatccaagaatcgactaatccgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagcca 25293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 34516415 - 34516502
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||  || |||||||||||| | ||||||    
T  34516415 aaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaggggcccgtttaaagcgagagcaag 34516502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 44946062 - 44946143
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagt 350  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | || |||||||||||||| |||||||    
T  44946062 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagt 44946143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 3943936 - 3943848
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaag 349  Q
    ||||||| ||||||||||||  | |||||||| | | |||||||||| || |||||||||||| | |||||||||||||||| ||||||    
T  3943936 aaacttggtatccgatccaataaccgactaatccaaggggaccaatcccaccacccacttgcgggagccccgtttaaagccagagcaag 3943848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 4769358 - 4769274
Alignment:
Q  266 ttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| ||| ||||||||||| || |||||||| |||| |  ||||||||| || ||||||||||||||| ||||||    
T  4769358 ttgatatccgatctaagaatcgactaatttgaggggaccaacctcaccgtccacttgcggggcccccgtttaaagccagagcaag 4769274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 11941219 - 11941299
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | || |||||||||||||| ||||||    
T  11941219 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaag 11941299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 15038147 - 15038067
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| ||||||||||  || |||||||||| || | ||||||||| | ||| ||||||||||||||||||||    
T  15038147 tatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagcaag 15038067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 28669061 - 28668981
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||  |||||||||| ||| |||||||||| || | ||||||||  | ||||||||||||||||||||||||    
T  28669061 tatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagcaag 28668981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 35171988 - 35171908
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    |||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  35171988 tatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 35171908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 36242321 - 36242401
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| ||||| |||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  36242321 tatccgatccaagaatcgattaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaag 36242401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 18976464 - 18976518
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 324  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  18976464 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcg 18976518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 10582015 - 10582079
Alignment:
Q  284 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    |||||||||||||| |||||||||| || | ||||||||||||| |||||||||||| | ||||||    
T  10582015 atcgactaattcgaggggaccaatccca-cgcccacttgcgagggcccgtttaaagctagagcaag 10582079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 19605847 - 19605907
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||| |||||||||||||||  || |||||||||| ||||||||||||| | ||||||||    
T  19605847 aaactcgatatccgatccaagtgtcaactaattcgaggggaccaatctcaccgcccacttg 19605907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 30466839 - 30466919
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||   ||||||||| | ||||| ||||||||||| ||||||    
T  30466839 tatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaag 30466919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 33827582 - 33827662
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| | | |||||||||| || | ||||||||| | || |||||||||||||| ||||||    
T  33827582 tatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagcaag 33827662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 8024677 - 8024744
Alignment:
Q  268 gatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtt 334  Q
    ||||||| ||||||||| ||||||||| ||  |||||||||||| || |||||||||| |||||||||    
T  8024677 gatatccaatccaaggaccgactaatttgagaggaccaatctcaccatccacttgcgacggccccgtt 8024744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 8192361 - 8192439
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa 348  Q
    ||||||||||||||| |||||||| ||| ||| |||||| || | |||||||||||||  |||||  |||||| |||||    
T  8192361 tatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcgaggggccgttctaagccagagcaa 8192439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 24196176 - 24196111
Alignment:
Q  284 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagt 350  Q
    |||||||||| ||| |||||||||| || | |||||||||| ||||| ||||||||||| |||||||    
T  24196176 atcgactaatccgaggggaccaatcccaccgcccacttgcggggccc-gtttaaagccagagcaagt 24196111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 14487013 - 14486960
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc 323  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | |||||||||    
T  14487013 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgc 14486960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 4852725 - 4852649
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaa 338  Q
    |||||||  |||||||||||| ||||| |||| ||| |||||||||  || |  ||||||||| |||||||||||||    
T  4852725 aaacttggcatccgatccaagaatcgattaatccgaggggaccaattccaccgtccacttgcggggccccgtttaaa 4852649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 18692148 - 18692096
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||    
T  18692148 tatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttg 18692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 19850017 - 19849941
Alignment:
Q  274 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||| ||||| ||||| ||  |||||||||||| | ||||||||| | ||||| ||||||||||| ||||||    
T  19850017 cgatccaagaatcgattaatttgagaggaccaatctcaccgcccacttgcgggggccctgtttaaagccagagcaag 19849941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 11464917 - 11464989
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcca 342  Q
    ||||||||||||| |||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||    
T  11464917 tatccgatccaagaatcgactaattcgaggggaccaatcccaccacccacttgcggggccccgtttaaagcca 11464989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 6014281 - 6014369
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||| ||||||||||||||| |||||||||||||| ||||| ||||||| | |||||||||| || ||||||||||||||| ||||||    
T  6014281 aaactcgatatccgatccaagaatcgactaattcgaggggactaatctcaccgcccacttgcgtggaccccgtttaaagccagagcaag 6014369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 19456220 - 19456299
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| ||||||||||||||||| ||||||    
T  19456220 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagccagagcaag 19456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 5049332 - 5049245
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||||| || |  ||| ||||| || |||||||||||||| ||||||    
T  5049332 aaacttggtattcgatccaagaatcgactaattcgatgggaccaatcccaccgtccatttgcgggggcccgtttaaagccagagcaag 5049245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 41351113 - 41351192
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||  |||||||||||||||| ||||||    
T  41351113 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggagccccgtttaaagccagagcaag 41351192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 11926510 - 11926591
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |||||||||||  | ||||||||||||||||| ||||||    
T  11926510 tatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagcaag 11926591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 8484670 - 8484750
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  8484670 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 8484750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 10869566 - 10869654
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||| ||||||||||||| | |||||||| ||| |||||||||| || | ||||||||| |||||||| |||||||||| ||||||    
T  10869566 aaacttggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcggaggccccatttaaagccagagcaag 10869654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 27498740 - 27498820
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  27498740 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 27498820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 32059449 - 32059529
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  32059449 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 32059529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 38684395 - 38684316
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | | |||||||| || |||||||||||||| ||||||    
T  38684395 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccagagcaag 38684316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 13038464 - 13038537
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||||||||||| |||||||||||||| |||| ||||| || | ||||||||| | |||||||||||||||||    
T  13038464 tatccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagcca 13038537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 7151491 - 7151437
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 324  Q
    ||||||||||||| |||||||||||| | ||||||||| ||||||||| ||||||    
T  7151491 tatccgatccaagaatcgactaattctaggggaccaatttcatcacccgcttgcg 7151437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 13108459 - 13108529
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaag 339  Q
    ||||||||||||| |||||||||||||| |||| ||||| || | ||||||||| | ||||||||||||||    
T  13108459 tatccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaag 13108529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 27487563 - 27487644
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| |||  ||||||||||||| | ||||||    
T  27487563 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaagggcccccgtttaaagctagagcaag 27487644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 4603965 - 4603892
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||||||||||||| |||||||| ||| |||||||||| || |  |||||||| | |||||||||||||||||    
T  4603965 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagcca 4603892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 18207395 - 18207322
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | |||| ||||||||||||    
T  18207395 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagcca 18207322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 22693123 - 22693054
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaa 338  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | |||||||||||||    
T  22693123 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaa 22693054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 35425201 - 35425128
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||||||||||| |||||||||| |||  ||||||||| || | ||||||||| | |||||||||||||||||    
T  35425201 tatccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagcca 35425128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 15641115 - 15641194
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  15641115 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 15641194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 31287955 - 31288035
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||||| |||||| | |||||||||||| | |||||||| || | ||||||||| | |||||||||||||| |||||||||    
T  31287955 tatccggtccaagaaccgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaagcaag 31288035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 34272358 - 34272303
Alignment:
Q  77 tttatgcacaatccaagcttccttaattttaaaattactagtcacatgtccattta 132  Q
    ||||||||||||| |||| ||||| ||||||  || ||||||||||||||||||||    
T  34272358 tttatgcacaatctaagcatccttgattttaggatcactagtcacatgtccattta 34272303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 930487 - 930533
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatc 308  Q
    ||||| ||||||||||||||||| |||||||| ||| ||||||||||    
T  930487 aaactcgatatccgatccaaggaccgactaatccgaggggaccaatc 930533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 37495242 - 37495188
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 324  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||    
T  37495242 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg 37495188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 13659254 - 13659335
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagt 350  Q
    ||||||||||||| ||||| |||| ||| |||| ||||| || | ||||||||| | || ||||||||||| ||||||||||    
T  13659254 tatccgatccaagaatcgattaatccgaggggatcaatcccaccgcccacttgcgggggtcccgtttaaagtcaaagcaagt 13659335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 21377258 - 21377323
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtt 334  Q
    |||||||||||| || |||||||| | | | ||||||||||| ||||||||||| |||||||||||    
T  21377258 tatccgatccaaagaccgactaatccaaagagaccaatctcaccacccacttgcagaggccccgtt 21377323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 24158175 - 24158240
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtt 334  Q
    |||||||| |||||| ||||||||  || ||||||||||||| | ||||||||| |||||||||||    
T  24158175 tatccgattcaaggaccgactaatctgaggggaccaatctcaccgcccacttgcagaggccccgtt 24158240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 33709512 - 33709585
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagcca 342  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||  | || ||||||||||||||    
T  33709512 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggtcccgtttaaagcca 33709585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 22392876 - 22392796
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||||||  ||||||||||  || |||||||||  || | |||||||||| || ||||||||||||||| ||||||    
T  22392876 tatccgatccaaaaatcgactaatctgaggggaccaattccaccgcccacttgcgggggccccgtttaaagccagagcaag 22392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 23270523 - 23270611
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaag 349  Q
    ||||||| ||||| ||||||| ||| |||||| ||| |||||||||| || |  ||| ||||| || | ||||||||||||||||||||    
T  23270523 aaacttggtatccaatccaagaatcaactaatccgaggggaccaatcccaccgtccatttgcgggggctccgtttaaagccaaagcaag 23270611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 25750622 - 25750674
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||||||||||| ||||||||||  || ||||||||||||| | ||||||||    
T  25750622 tatccgatccaagaatcgactaatctgaagggaccaatctcaccccccacttg 25750674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 30486016 - 30485936
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| || ||||||| ||| |||||||||| || | ||||||||| | |||  |||||||||||| ||||||    
T  30486016 tatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagcaag 30485936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 32151612 - 32151532
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| ||||||||||||| | ||||||||| | ||||||||||||||||| ||||||    
T  32151612 tatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagcaag 32151532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 18176896 - 18176976
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| |||||||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  18176896 tatccgatccaagaatcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 18176976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 40133458 - 40133538
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  40133458 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 40133538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 24165724 - 24165803
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || | |||||||||| ||||||||||||||||| ||||||    
T  24165724 tatccgatccaagaatcgactaatccgaggggaacaatcccaccgcccacttgcggggccccgtttaaagccagagcaag 24165803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 52821645 - 52821724
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||| || ||||||||||||||||| ||||||    
T  52821645 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttacggggccccgtttaaagccagagcaag 52821724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 31537839 - 31537920
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||| ||||||||||||||| || ||||||||||| ||||||||||||| | ||||||||| | ||| |||||||||||||    
T  31537839 aaactcgatatccgatccaagaattgactaattcgaggggaccaatctcaccgcccacttgcaggggctccgtttaaagcca 31537920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 55371303 - 55371376
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagcca 342  Q
    |||||||||||||||||||||||| ||| |||||||||| || | ||||||||||| |||||||||| ||||||    
T  55371303 tatccgatccaaggatcgactaatccgaggggaccaatcccaccgcccacttgcgagggccccgttttaagcca 55371376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 25289724 - 25289803
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  25289724 tatccgatccaagaatcgactaattcga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 25289803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 39041861 - 39041941
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| |||  ||||||||| || ||||||||||| | ||||||||||||||||| ||||||    
T  39041861 tatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaag 39041941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 48977576 - 48977496
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  48977576 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagcaag 48977496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 15566509 - 15566588
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| ||||||||||  || |||||||||| || | |||||||||| || |||||||||||||| ||||||    
T  15566509 tatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagcaag 15566588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 24407449 - 24407370
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaa 348  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||| |||||||||||||| || |||||    
T  24407449 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgatggccccgtttaaagtcagagcaa 24407370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 53288714 - 53288801
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||| || |||||||||  |||||||||||||| ||||| ||||||| |  ||  ||||| ||||||||||||||||||||||||    
T  53288714 aaacttggtaaccgatccaataatcgactaattcgaggggactaatctcaccgtccgtttgcggggccccgtttaaagccaaagcaag 53288801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 8097288 - 8097366
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagca 347  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||    
T  8097288 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca 8097366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 39890615 - 39890693
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa 348  Q
    ||||||||||||| |||||||| | |||| ||||||||||||||| || | |||| || |||||||||||||| |||||    
T  39890615 tatccgatccaagaatcgactagtccgattggaccaatctcatcatcctcctgcggggtcccgtttaaagccagagcaa 39890693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 53424186 - 53424264
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa 348  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | | |||||||| || |||||||||||||| |||||    
T  53424186 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccatagcaa 53424264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 48105065 - 48104984
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaagt 350  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||  | ||||| ||||||||||| |||||||    
T  48105065 tatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgtgggggccctgtttaaagccagagcaagt 48104984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 10190751 - 10190831
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |  |||||||| | ||||||||||||||||| ||||||    
T  10190751 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaag 10190831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 25379949 - 25379869
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||| ||||| | ||||||||||||||||| ||||||    
T  25379949 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagccagagcaag 25379869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 33398477 - 33398557
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| || ||||||| || | ||||||||| | ||||||||||||||| | ||||||    
T  33398477 tatccgatccaagaatcgactaattcgagggaaccaatcccaccgcccacttgcgggggccccgtttaaagctagagcaag 33398557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 49258271 - 49258351
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||  | ||||||||||||||||| ||||||    
T  49258271 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaag 49258351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 54475869 - 54475789
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaag 349  Q
    |||| |||||||| |||||||||| | | |||||||||| || | ||||||||||  ||||||||||||||||||||||||    
T  54475869 tatctgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcggtggccccgtttaaagccaaagcaag 54475789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 29915288 - 29915351
Alignment:
Q  279 caaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcca 342  Q
    |||| ||||||||||||||||||| ||||| || | |||||||||| || ||||||||||||||    
T  29915288 caagaatcgactaattcgatgggatcaatcccaccgcccacttgcgggggcccgtttaaagcca 29915351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 29964441 - 29964504
Alignment:
Q  279 caaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcca 342  Q
    |||| ||||||||||||||||||| ||||| || | |||||||||| || ||||||||||||||    
T  29964441 caagaatcgactaattcgatgggatcaatcccaccgcccacttgcgggggcccgtttaaagcca 29964504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 33698716 - 33698794
Alignment:
Q  271 atccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaa 348  Q
    ||||||||| || ||||||||||| || |||||||||| || |||||| ||||| | |||||||||||||||| |||||    
T  33698716 atccgatccgagaatcgactaatttgaggggaccaatcccaccacccatttgcgggagccccgtttaaagccagagcaa 33698794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 35493093 - 35493019
Alignment:
Q  276 atccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  35493093 atccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 35493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 8456159 - 8456239
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    |||||||| |||| |||||||||| ||| |||||||||| ||   |||||||||| || ||||||||||||||| ||||||    
T  8456159 tatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagcaag 8456239  T

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Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 10083828 - 10083908
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |  |||||||  | ||||||||||||||||| ||||||    
T  10083828 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagcaag 10083908  T

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Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 26174301 - 26174221
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | |||||  |||||||||| ||||||    
T  26174301 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagcaag 26174221  T

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Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 30257812 - 30257732
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||  || | ||||||||| | |||||| |||||||||| ||||||    
T  30257812 tatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaag 30257732  T

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Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 45272425 - 45272505
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||||||||||||  || |||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  45272425 tatccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 45272505  T

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Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 46576536 - 46576456
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| | | ||||||||||  | | ||||||||| | ||||||||||||||||| ||||||    
T  46576536 tatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaag 46576456  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 4252405 - 4252443
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatc 308  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  4252405 tatccgatccaaggatcgactaatccgaggggaccaatc 4252443  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 17579136 - 17579225
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg--aggccccgtttaaagccaaagcaag 349  Q
    ||||| ||||| ||||||||  ||||||||||  || ||||||||||||| | ||||||||||   || |||||||||||| ||||||||    
T  17579136 aaactcgatattcgatccaaaaatcgactaatctgaggggaccaatctcaccgcccacttgcggagggtcccgtttaaagctaaagcaag 17579225  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 30807162 - 30807242
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| ||||||||||  | | |||||||||  | ||||||||||||||||| ||||||    
T  30807162 tatccgatccaagaatcgactaatccga-gggaccaatcctaccgcccacttgcggggggccccgtttaaagccagagcaag 30807242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 53848443 - 53848497
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 324  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||    
T  53848443 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg 53848497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 21363131 - 21363051
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| ||||| |||| ||| || ||||||| || | ||||||||| | ||| ||||||||||||| ||||||    
T  21363131 tatccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaag 21363051  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 45529764 - 45529843
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| ||||||    
T  45529764 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaag 45529843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 50731246 - 50731298
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||||||||||||||||||||||  || |||||||||| || | ||||||||    
T  50731246 tatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttg 50731298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 50781608 - 50781556
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||||||||||||||||||||||  || |||||||||| || | ||||||||    
T  50781608 tatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttg 50781556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 52455658 - 52455738
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||| ||||||| |||||||||| ||| |||||||||| || ||  |||||||| || |||||||||||| || ||||||    
T  52455658 tatccaatccaagaatcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaagtcagagcaag 52455738  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 53233920 - 53233999
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||| ||||| ||||||    
T  53233920 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagcaag 53233999  T

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Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 15059411 - 15059491
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| || ||||||||||||||| ||||||    
T  15059411 tatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagcaag 15059491  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 4621246 - 4621326
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  4621246 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaag 4621326  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 24122211 - 24122131
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| | |||||||||||||||| ||||||    
T  24122211 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaag 24122131  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 24674581 - 24674501
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  24674581 tatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 24674501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 17935957 - 17935878
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaa 348  Q
    ||||||||||||| |||||||||| |||  ||||||||| |||| ||||||||| | ||||||||||||||||| |||||    
T  17935957 tatccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagccagagcaa 17935878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 1379085 - 1379005
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagt 350  Q
    ||||||||| ||| ||||||||||  || ||||||||||||| |  ||||||||| || |||||||||||||| |||||||    
T  1379085 tatccgatctaagaatcgactaatctgaggggaccaatctcaccgtccacttgcgggggcccgtttaaagccagagcaagt 1379005  T

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Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 7197256 - 7197336
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||| | |||||||||| ||| ||||||||||||| | ||||||||| | |||| |||||||||||| ||||||    
T  7197256 tatccgatccatgaatcgactaatccgaggggaccaatctcaccgcccacttgcaggggcctcgtttaaagccagagcaag 7197336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 7766728 - 7766816
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||| |||||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| || |||||||||||| || ||||||    
T  7766728 aaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagcaag 7766816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 9500356 - 9500444
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 349  Q
    ||||| ||||||||||||||| |||||||||| ||| | ||||||||||| | ||||||||  | ||| ||||||||||||| ||||||    
T  9500356 aaactcgatatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagcaag 9500444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 37351462 - 37351534
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcca 342  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | |||||||| | || ||||||||||||||    
T  37351462 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgtgggggcccgtttaaagcca 37351534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 1818896 - 1818817
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||  || ||||||| ||||| ||||||||   ||||| ||||||| || |||||||||||||||||||||    
T  1818896 tatccgatccaataattgactaatccgatgtgaccaatcatgtcacctacttgcgggggcccgtttaaagccaaagcaag 1818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 34778527 - 34778448
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaa 348  Q
    ||||||||||||| |||||||||| | | |||||||||| || |  ||||||||| || |||||||||||||||||||||    
T  34778527 tatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccaaagcaa 34778448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 40802082 - 40802157
Alignment:
Q  274 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    |||| |||| |||||||||||| |  |||||||||||| |||||||||||| || ||||||||||| || ||||||    
T  40802082 cgattcaagaatcgactaattctagaggaccaatctcaccacccacttgcggggacccgtttaaagtcagagcaag 40802157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 8254761 - 8254842
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagt 350  Q
    |||||||| |||| |||||||||||| | |||| ||||| || | ||||||||| | ||||||||||||||||| |||||||    
T  8254761 tatccgattcaagaatcgactaattcaaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagt 8254842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 7578597 - 7578517
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||  ||| |||||| ||| || ||||||| || ||||||||||||| |||||||||||||| || ||||||    
T  7578597 tatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagcaag 7578517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 27159281 - 27159205
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaa 338  Q
    ||||| |||||||||||||| |||||||||||  || |||||||||| || |  ||||||||| || ||||||||||    
T  27159281 aaactcgatatccgatccaaagatcgactaatctgaggggaccaatcccaccgtccacttgcgggggcccgtttaaa 27159205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 40145890 - 40145942
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||||||||||| |||||||||| ||| |||||||| |||| ||||||||||    
T  40145890 tatccgatccaagaatcgactaatccgaggggaccaaactcaccacccacttg 40145942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 48699955 - 48699875
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcc 341  Q
    ||||| ||||||||||||||| |||||||||| ||| |||| ||||| || | ||||||||| | ||| ||||||||||||    
T  48699955 aaactcgatatccgatccaagaatcgactaatccgaagggaacaatcccaccgcccacttgcgggggctccgtttaaagcc 48699875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 18647041 - 18646962
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaa 348  Q
    |||||||| |||| |||||||||||||| |||| |||||||| | ||||||| | | ||| ||||||||||||| |||||    
T  18647041 tatccgattcaagaatcgactaattcgaggggatcaatctcaccgcccacttacaggggctccgtttaaagccagagcaa 18646962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 3272943 - 3272997
Alignment:
Q  287 gactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcc 341  Q
    ||||||||||| || |||||||||||| |||||||| | |||||| |||||||||    
T  3272943 gactaattcgagggaaccaatctcatcgcccacttgtggggccccatttaaagcc 3272997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 7947002 - 7946952
Alignment:
Q  299 gggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||| |||||| |||||||| | ||||||    
T  7947002 gggaccaatctcaccacccacttgcggggccccatttaaagcgagagcaag 7946952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 23041710 - 23041672
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatc 308  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  23041710 tatccgatccaagaatcgactaattcgaggggaccaatc 23041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 46608006 - 46607944
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 324  Q
    ||||| ||||||||||||||||| |||||||| ||| |||| ||||| || | ||||||||||    
T  46608006 aaactcgatatccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgcg 46607944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 16539795 - 16539731
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtt 334  Q
    |||||||| |||| ||||||||||| || |||||||||| || ||||||||| |  |||||||||    
T  16539795 tatccgatacaagtatcgactaatttgaggggaccaatcccaccacccacttacagggccccgtt 16539731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 27454873 - 27454955
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc---gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||| |||   | || |||||||||||||| ||||||    
T  27454873 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacatgcggggggggcccgtttaaagccagagcaag 27454955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 30677372 - 30677284
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaag 349  Q
    ||||| |||||||| |||||| | ||||||||  || |||||||||| || | |||||||||| ||  ||| |||||||||||||||||    
T  30677372 aaactcgatatccggtccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaag 30677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 36155897 - 36155977
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| ||||||||||| || |||||||||| || | ||||| ||| | ||||| ||||||| | ||||||||    
T  36155897 tatccgatccaagaatcgactaatttgaagggaccaatcccaccgcccacctgcgggggccctgtttaaaactaaagcaag 36155977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 28090011 - 28089932
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||| || ||| |||||||||| ||||||    
T  28090011 tatccgatccaagaatcgactaatccgaggggaccaatctcatcgcccacttgcgggggcccatttaaagccagagcaag 28089932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 17196959 - 17197039
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  17196959 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 17197039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 21835351 - 21835263
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||| ||||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  21835351 aaactcgatatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 21835263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 31274105 - 31274026
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    |||||| |||||| |||||||||||||| |||||||||||||   ||||||||||  |||||||||||||||| ||||||    
T  31274105 tatccggtccaagaatcgactaattcgaggggaccaatctcactgcccacttgcggagccccgtttaaagccagagcaag 31274026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 42863719 - 42863660
Alignment:
Q  58 agtgtccatcattcctctgtttatgcacaatccaagcttccttaattttaaaattactag 117  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  42863719 agtgaccatcattcctctatttatgcacaatctaagcttccttaattttaaaatcactag 42863660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 11998041 - 11997961
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||| | ||||| ||||||||||| ||||||    
T  11998041 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagcaag 11997961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 22120080 - 22120000
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  22120080 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 22120000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 22638480 - 22638400
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| | || ||||| || | ||||||||| ||||||||||||||||||| ||||||    
T  22638480 tatccgatccaagaatcgactaattcgaggagatcaatcccaccgcccacttgcggaggccccgtttaaagccagagcaag 22638400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 40542919 - 40542999
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  40542919 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 40542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 654714 - 654793
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| | |||||||| ||| |||||||||| || | |||||||||| || |||||||||||||| ||||||    
T  654714 tatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagcaag 654793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 32471196 - 32471295
Alignment:
Q  12 caaagggagagaggagagacttcaccaatattcttcctatccct----taagtgtccatcattcctctgtttatgcacaatccaagcttccttaatttta 107  Q
    |||||||||||||||||||||||| |||| |||||| || |||     | ||||  ||||||| |||| |||||||||||||||||||||||| ||||||    
T  32471196 caaagggagagaggagagacttcatcaattttcttcataacccggccctcagtgatcatcatttctctatttatgcacaatccaagcttccttgatttta 32471295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 33137826 - 33137904
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagc 340  Q
    ||||| ||||||||||| ||| |||||||||||||| ||||||||| ||| | |||||||||  |||||| ||||||||    
T  33137826 aaactcgatatccgatctaagaatcgactaattcgaggggaccaatttcaccgcccacttgcagggccccatttaaagc 33137904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 29861862 - 29861781
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagt 350  Q
    ||||||||| ||| |||||||||||||| |||| ||||| || | ||||||||| | ||||||||||||||||| |||||||    
T  29861862 tatccgatctaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagt 29861781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 2751463 - 2751383
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||| |||| | ||||||||||||||||| ||||||    
T  2751463 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaag 2751383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 3851949 - 3851869
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  3851949 tatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 3851869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 7275469 - 7275389
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||| ||||||||||| ||||||    
T  7275469 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaag 7275389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 23330748 - 23330827
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaa 348  Q
    |||||||||||||||| |||||||| || ||||||||||| | | ||||||||| |||| ||||||| |||||| |||||    
T  23330748 tatccgatccaaggattgactaatttgaggggaccaatcttaccgcccacttgcggaggtcccgttttaagccagagcaa 23330827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 39145653 - 39145740
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||| |||| ||| |||| |||||||||||||| |||||||||| || |  ||||||||  || |||||||||||||| ||||||    
T  39145653 aaacttggtatctgattcaagaatcgactaattcgaggggaccaatcccaccgtccacttgcaggggcccgtttaaagccagagcaag 39145740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 31712911 - 31712968
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg 327  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||||||    
T  31712911 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgagg 31712968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 7175871 - 7175951
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | || || ||||||||||| ||||||    
T  7175871 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaag 7175951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 18044299 - 18044219
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| ||||||||||  || |||||||||  || ||||||||||  | ||||||||||||||||| ||||||    
T  18044299 tatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagcaag 18044219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 22703678 - 22703598
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| ||||||    
T  22703678 tatccgatcaaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaag 22703598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 24934737 - 24934785
Alignment:
Q  198 ttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    ||||||||||||||| |||| ||||||||||||| |||||||| |||||    
T  24934737 ttgataagaagtttaaagtagcaactttatcttagaaattgtgcattca 24934785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 31197790 - 31197702
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||| ||||||||||||||| ||||||||||  || |||||||||| || |  |||||||| | ||||||||||||||| | ||||||    
T  31197790 aaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccaccgaccacttgcgggggccccgtttaaagcaagagcaag 31197702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 2344491 - 2344416
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaa 344  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | | ||||||| | || ||||||||||||||||    
T  2344491 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaa 2344416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 8943410 - 8943464
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 324  Q
    ||||||||||||| |||||||||||| | |||||||||| || | ||||||||||    
T  8943410 tatccgatccaagaatcgactaattcaaggggaccaatcacaccgcccacttgcg 8943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 21574111 - 21574152
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctca 311  Q
    ||||||||||||||| |||||||| ||| |||||||||||||    
T  21574111 tatccgatccaaggaccgactaatccgaggggaccaatctca 21574152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 37056394 - 37056334
Alignment:
Q  273 ccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtt 334  Q
    |||||||||||| ||||| ||||||||||||||||| ||   |||||||||| |||||||||    
T  37056394 ccgatccaaggaccgactgattcgatgggaccaatcccacagcccacttgcg-ggccccgtt 37056334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 42913522 - 42913603
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagt 350  Q
    ||||||||| ||| ||| |||||| ||| |||||||||| || |  ||||||||| || ||||||||||||||| |||||||    
T  42913522 tatccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagt 42913603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 43785308 - 43785377
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaa 338  Q
    ||||||||||||  |||||||||| | | ||||||||||||| |  |||||||| |||||||||||||||    
T  43785308 tatccgatccaaaaatcgactaatccaaggggaccaatctcaccgtccacttgcggaggccccgtttaaa 43785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 23092288 - 23092208
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||| | |||||||||| ||| |||||||||| || |  ||| |||| | ||||||||||||||||| ||||||    
T  23092288 tatccgatccatgaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagccagagcaag 23092208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 28647169 - 28647109
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||| |||||||||||||||||  ||||||||||| || ||||||| || | ||||||||    
T  28647169 aaactcgatatccgatccaaggacagactaattcgagggaaccaatcccaccgcccacttg 28647109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 28951063 - 28950983
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| || | ||| ||||| |||||||||| || | || |||||||| || |||||||||||||| ||||||    
T  28951063 tatccgatccaagaattgtctagttcgaggggaccaatcccaccgccgacttgcgagggacccgtttaaagccagagcaag 28950983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 39773277 - 39773225
Alignment:
Q  84 acaatccaagcttccttaattttaaaattactagtcacatgtccatttatctc 136  Q
    ||||| ||||||||||||||||||  || ||||| ||||||||||||| ||||    
T  39773277 acaattcaagcttccttaattttaggatcactagccacatgtccatttttctc 39773225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 19471802 - 19471721
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||||||||  | ||||||||||||||||| ||||||    
T  19471802 tatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaag 19471721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 19542726 - 19542645
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||||||||  | ||||||||||||||||| ||||||    
T  19542726 tatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaag 19542645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 19589970 - 19590051
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||||||||  | ||||||||||||||||| ||||||    
T  19589970 tatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaag 19590051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 20306100 - 20306020
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||||||||||||||||||||||||||| |||||||||| || | ||||||||| | || |||||||||||||| ||||||    
T  20306100 tatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaag 20306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 21092733 - 21092653
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||||||||||||||||||||||||||| |||||||||| || | ||||||||| | || |||||||||||||| ||||||    
T  21092733 tatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaag 21092653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 4718837 - 4718757
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  4718837 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 4718757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 8765535 - 8765615
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| | |||||||||||||||| ||||||    
T  8765535 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaag 8765615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 21603422 - 21603342
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  21603422 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 21603342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 39349456 - 39349368
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||| ||||||||||||| |||||||||| ||| |||| ||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  39349456 aaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 39349368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 42328196 - 42328116
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||  |||||||  | ||||||||||||||||| ||||||    
T  42328196 tatccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagcaag 42328116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 264409 - 264488
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| | || |||||||||||||| ||||||    
T  264409 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaag 264488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 651512 - 651433
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| | || |||||||||||||| ||||||    
T  651512 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaag 651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 837247 - 837168
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| | || |||||||||||||| ||||||    
T  837247 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaag 837168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 2639420 - 2639499
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaa 348  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| |||||    
T  2639420 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 2639499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 15259416 - 15259495
Alignment:
Q  271 atccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||||||||||| |||||||||||||| |||||||||  || | ||||||||| | ||||||||||||||||| ||||||    
T  15259416 atccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaag 15259495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 3036599 - 3036545
Alignment:
Q  192 agacacttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    ||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  3036599 agacactggataataagtttaaagtagcaactttatcttaaaaattgtgtattca 3036545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 25248525 - 25248461
Alignment:
Q  284 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa 348  Q
    |||||||||| ||| |||||||||| || | ||||||||||||| |||||||||||||| |||||    
T  25248525 atcgactaatccgaggggaccaatcccaccgcccacttgcgagggcccgtttaaagccagagcaa 25248461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 28193666 - 28193586
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||  | ||||||||||||||||| ||||||    
T  28193666 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagcaag 28193586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 34237664 - 34237744
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | | ||||||| | ||||||||||||||||| ||||||    
T  34237664 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagcaag 34237744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 2618377 - 2618298
Alignment:
Q  271 atccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||| ||||||||||||| ||||||    
T  2618377 atccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaag 2618298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 3049168 - 3049117
Alignment:
Q  195 cacttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  3049168 cacttgataagaagcttaaagtaacaactttatcttagaaattgtgtattca 3049117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 11364692 - 11364735
Alignment:
Q  64 catcattcctctgtttatgcacaatccaagcttccttaatttta 107  Q
    ||||||| |||| |||||||||||||||||||||||||||||||    
T  11364692 catcatttctctatttatgcacaatccaagcttccttaatttta 11364735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 26168862 - 26168915
Alignment:
Q  274 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg 327  Q
    ||||||||| |||||||| | ||| ||||||||||||||| |||||||||||||    
T  26168862 cgatccaagaatcgactactccgaggggaccaatctcatcccccacttgcgagg 26168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 3734632 - 3734712
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||   |||| |||| | ||||||||||||||||| ||||||    
T  3734632 tatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaag 3734712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 34610696 - 34610776
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||   | | ||||||||||| || | |||||||||||| ||||||    
T  34610696 tatccgatccaagaatcgactaattcgaggggaccaattctaccgcccacttgcgaggggctcgtttaaagccagagcaag 34610776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 29912128 - 29912179
Alignment:
Q  195 cacttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||||||||| ||||  || |||||||||||| |||||||||||    
T  29912128 cacttgataagaagtttaaagtagaaattttatcttaaaatttgtgtattca 29912179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 15808787 - 15808741
Alignment:
Q  198 ttgataagaagtttagagtatcaactttatcttaaaaattgtgtatt 244  Q
    ||||||| ||||||| |||| ||| ||||||||||||||||||||||    
T  15808787 ttgataaaaagtttaaagtagcaattttatcttaaaaattgtgtatt 15808741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 24018583 - 24018494
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag--gccccgtttaaagccaaagcaag 349  Q
    ||||| |||||||| |||||| | |||||||||| | ||||||||||||| | |||||||| | |  | |||||||||||||| ||||||    
T  24018583 aaactcgatatccggtccaagaaccgactaattcaaggggaccaatctcaccgcccacttgtggggaggcccgtttaaagccagagcaag 24018494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 28909012 - 28908942
Alignment:
Q  273 ccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagcca 342  Q
    |||||||||||| ||||||||  || |||| ||||| |||| |||||||||| | ||||||||||||||||    
T  28909012 ccgatccaaggaccgactaatctgaggggatcaatcacatcgcccacttgcgggagccccgtttaaagcca 28908942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 28964220 - 28964152
Alignment:
Q  274 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||| ||| |||||||||||||| |||||||||| || | ||||||||| | |||||||||||||||||    
T  28964220 cgatctaagaatcgactaattcgaggggaccaatccca-cgcccacttgcgggggccccgtttaaagcca 28964152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 42643127 - 42643188
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc 331  Q
    ||||||||||||| ||| |||||| ||| |||||||||| || | |||||||||| ||||||    
T  42643127 tatccgatccaagaatcaactaatgcgaggggaccaatcccaccgcccacttgcggggcccc 42643188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 7557960 - 7558032
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcca 342  Q
    |||||||| |||  |||||||||||||| |||||||||| || |  ||||||||| ||  |||||||||||||    
T  7557960 tatccgatgcaaaaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggtccgtttaaagcca 7558032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 14633154 - 14633094
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||||| ||||||||||||| |||||||||| | | |||||||||| || | ||||||||    
T  14633154 aaacttggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttg 14633094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 3222645 - 3222724
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| |||||||||||||| || ||||||    
T  3222645 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagacagagcaag 3222724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 9844134 - 9844053
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagcca 342  Q
    ||||| ||||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||  | |||||||||||||||||    
T  9844134 aaactcgatatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagcca 9844053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 9239163 - 9239083
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | |||||| |||||||||||||||||    
T  9239163 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaag 9239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 11449067 - 11448979
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||| |||||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  11449067 aaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 11448979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 21148520 - 21148599
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    |||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| |||||||||||||| || ||||||    
T  21148520 tatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagtcagagcaag 21148599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 654155 - 654235
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaag 349  Q
    ||||||||||||  |||||||||| ||| |||||||||| || | |||||||||| | |||||||||||||||| ||||||    
T  654155 tatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaag 654235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 15360107 - 15360187
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||| |||| | ||||||||||||||||| ||||||    
T  15360107 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaag 15360187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 21982330 - 21982409
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  21982330 tatccgatccaagaatcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 21982409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 28672255 - 28672175
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaag 349  Q
    |||| |||||||| |||||||||| ||| |||||||||| || | ||||||||||| || |||||||||||||||| ||||    
T  28672255 tatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaag 28672175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 34147534 - 34147454
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | || |||||||||||||| ||||||    
T  34147534 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaag 34147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 34160150 - 34160070
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | || |||||||||||||| ||||||    
T  34160150 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaag 34160070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 14213070 - 14212999
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagc 340  Q
    ||||||||||||| |||||||||| |||  ||||||||| || |||||||||||| || |||||||||||||    
T  14213070 tatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcggggcccccgtttaaagc 14212999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 33718474 - 33718547
Alignment:
Q  266 ttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaa 338  Q
    ||||||||||||||||| |||||||||| ||| |||| ||||| || |  |||||||| |||||||||||||||    
T  33718474 ttgatatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcagaggccccgtttaaa 33718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 9690647 - 9690727
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| |||  ||||||||| || |  ||||||| || ||||||||||||||||| ||||||    
T  9690647 tatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagcaag 9690727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 327
Target Start/End: Complemental strand, 8479487 - 8479428
Alignment:
Q  268 gatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg 327  Q
    ||||||||||| ||||| ||||||||  || ||||||||||||||| |||||||| ||||    
T  8479487 gatatccgatctaaggaacgactaatctgaggggaccaatctcatcgcccacttgtgagg 8479428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 11841088 - 11841009
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||  |||||||||||||| ||||| |||| || |  ||||||  | ||||||||||||| ||||||||||    
T  11841088 tatccgatccaataatcgactaattcgaggggactaatcccaccgtccacttatggggccccgtttaaaaccaaagcaag 11841009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 6919437 - 6919383
Alignment:
Q  77 tttatgcacaatccaagcttccttaattttaaaattactagtcacatgtccattt 131  Q
    |||||||||||||||| ||| ||||||||||  || ||||| |||||||||||||    
T  6919437 tttatgcacaatccaaactttcttaattttagtatcactagccacatgtccattt 6919383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 6067630 - 6067581
Alignment:
Q  197 cttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||   || |||||||||||||||||| ||||||||||||||    
T  6067630 cttgataagaaacataaagtatcaactttatcttagaaattgtgtattca 6067581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 1345123 - 1345043
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| | | |||||||||| || |  |||||||| | || |||||||||||||| ||||||    
T  1345123 tatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaag 1345043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 5360080 - 5360132
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 322  Q
    ||||||||| ||| |||||||||||||| |||||||||| || | ||||||||    
T  5360080 tatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttg 5360132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 17149465 - 17149545
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||| ||| |||||| |||||||||||| |||||||||| || |   ||||||| | |||||| |||||||||||||||||    
T  17149465 tatctgattcaaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaag 17149545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 9517647 - 9517730
Alignment:
Q  267 tgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||| ||||||| ||| | |||||||||||||| || ||||||    
T  9517647 tgatatccgatccaagaatcgactaatccgaggggaccaatctcaccacccacctgcgggggccccgtttaaagtcagagcaag 9517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 27528804 - 27528884
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||| | |||||||| |||||||| ||||||    
T  27528804 tatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagcaag 27528884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 34723987 - 34723907
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| |||  ||||||||| || ||||||||||| | ||||||||||||||||| ||||||    
T  34723987 tatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaag 34723907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 34844767 - 34844847
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  34844767 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 34844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 40058861 - 40058941
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  40058861 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 40058941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 52983807 - 52983727
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  52983807 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 52983727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 52494676 - 52494609
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaa 337  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||| ||| |||||||||    
T  52494676 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcaagggcccgtttaa 52494609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 13771491 - 13771569
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagca 347  Q
    ||||||||||||| | |||||||||  | |||||||||||||||| ||||||||| | |||||||||||||||| ||||    
T  13771491 tatccgatccaagaaccgactaattataggggaccaatctcatcatccacttgcgggagccccgtttaaagccagagca 13771569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 49288045 - 49287967
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa 348  Q
    |||| |||||||| |||||||||| ||| ||||||||||||| | |||||||||| |  |||||||||||||| |||||    
T  49288045 tatctgatccaagaatcgactaatccgaggggaccaatctcagcgcccacttgcgggagcccgtttaaagccatagcaa 49287967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 20566546 - 20566458
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||| ||||||||||||||| ||||||||||  || |||||||||| || | ||||||||| | ||| ||||||||||||| ||||||    
T  20566546 aaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagccagagcaag 20566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 33696280 - 33696368
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||| ||||||||||||||| || ||||||| |||  |||||||||||| | ||||||||| | |||||| |||||||||| ||||||    
T  33696280 aaactcgatatccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagcaag 33696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 44343702 - 44343622
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaag 349  Q
    |||||||| |||| |||||||||||||| |||||||||| || | |||||||||| | ||||||||||||| || ||||||    
T  44343702 tatccgattcaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagtcagagcaag 44343622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 45787713 - 45787793
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||||||| |||||||||| || |  |||||||| | ||||| ||||||||||| ||||||    
T  45787713 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagcaag 45787793  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 7093567 - 7093508
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccactt 321  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||| || | |||||||    
T  7093567 aaactcgatatccgatccaaggaccgactaattcgaagggaccaatcccaccgcccactt 7093508  T

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Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 51535809 - 51535735
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagcca 342  Q
    ||||||||| ||| |||||||||||||| |||||||||| || | |||||||||  | |||||||||||||||||    
T  51535809 tatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgctgggggccccgtttaaagcca 51535735  T

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Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 28791310 - 28791224
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa 348  Q
    ||||| |||||||||| |||||| ||||||||||||  | |||||||||| | |||||||| |  | |||||||||||||| |||||    
T  28791310 aaactcgatatccgattcaaggaccgactaattcgaaagaaccaatctcaccgcccacttgtggagacccgtttaaagccagagcaa 28791224  T

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Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 22488029 - 22488110
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||||| ||||||||||||||| ||||||||| || |||| ||||| || | |||| |||| | |||||||||||||||||    
T  22488029 aaacttggtatccgatccaaggaccgactaatttgaggggatcaatcccaccgcccatttgcgggggccccgtttaaagcca 22488110  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 4912114 - 4912034
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    |||| |||||||| |||||||||||||  |||| ||||| || ||||||||||| | ||| ||||||||||||| ||||||    
T  4912114 tatctgatccaagaatcgactaattcggggggatcaatcacaccacccacttgcgggggctccgtttaaagccagagcaag 4912034  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 19660541 - 19660621
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || | ||||||||| | ||||| ||||||||||| ||||||    
T  19660541 tatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagcaag 19660621  T

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Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 25969512 - 25969591
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagt 350  Q
    |||||||| |||| |||||||||||||| |||||||||| || | | ||||| || || |||||||||||||| |||||||    
T  25969512 tatccgattcaagaatcgactaattcga-gggaccaatcccaccgctcacttacgggggcccgtttaaagccagagcaagt 25969591  T

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Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 32990619 - 32990543
Alignment:
Q  274 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||| |||||||| | ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  32990619 cgatccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 32990543  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 54127351 - 54127431
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    |||||| |||||| | |||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  54127351 tatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 54127431  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 12824588 - 12824550
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatc 308  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  12824588 tatccgatccaagaatcgactaattcgatgagaccaatc 12824550  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 35229356 - 35229318
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatc 308  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  35229356 tatccgatccaagaatcgactaattcgaggggaccaatc 35229318  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 246
Target Start/End: Original strand, 44369014 - 44369044
Alignment:
Q  216 tatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||||||||||||||||||||||    
T  44369014 tatcaactttatcttaaaaattgtgtattca 44369044  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 4585736 - 4585800
Alignment:
Q  284 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag 349  Q
    |||||||||| |||  ||||||||| || | |||||||||| || |||||||||||||||||||||    
T  4585736 atcgactaatccgaaaggaccaatc-caccgcccacttgcgggggcccgtttaaagccaaagcaag 4585800  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 13781176 - 13781131
Alignment:
Q  268 gatatccgatccaaggatcgactaattcgatgggaccaatctcatc 313  Q
    |||||||||| |||| ||||| |||||||| |||||||||||||||    
T  13781176 gatatccgattcaagaatcgattaattcgaggggaccaatctcatc 13781131  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 5609211 - 5609291
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || |  |||||||| | |||||| |||||||||| ||||||    
T  5609211 tatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagcaag 5609291  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 20077993 - 20078073
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| || || |||| || | ||||||| | | ||||||||||||||||| ||||||    
T  20077993 tatccgatccaagaatcgactaatccgagggaactaatcccaccgcccacttacgggggccccgtttaaagccagagcaag 20078073  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 27574506 - 27574426
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| || || |||| ||| |||||||| |||| | ||||||||| | |||||| |||||||||| ||||||    
T  27574506 tatccgatccaagaattgattaatccgaggggaccaaactcaccgcccacttgcgggggccccttttaaagccagagcaag 27574426  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 32986385 - 32986305
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||| | ||| |||||||||| || | ||||||||| | |||||| ||||||| || ||||||    
T  32986385 tatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaag 32986305  T

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Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 7310 - 7391
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca 342  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | |||||||||||||||||    
T  7310 aaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcca 7391  T

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Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 66942 - 66862
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| ||||||    
T  66942 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 66862  T

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Target: scaffold0576 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 5091 - 5171
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||| |||| | ||||||||||||||||| ||||||    
T  5091 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaag 5171  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 40512 - 40433
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  40512 tatccgatccaagaatcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 40433  T

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Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 39280 - 39207
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagcca 342  Q
    |||| |||||||| |||||||||| ||| |||||||||| || | |||||||||| || |||||||||||||||    
T  39280 tatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcca 39207  T

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Target: scaffold1175 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 2435 - 2515
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 349  Q
    |||||||| ||||||  ||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||    
T  2435 tatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 2515  T

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Target: scaffold0068 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 41654 - 41733
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||| ||| |||||||||| |||  ||||||||| | ||||||||||||||||| ||||||    
T  41654 tatccgatc-aagaatcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaag 41733  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 11421 - 11502
Alignment:
Q  262 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagcca 342  Q
    ||||||| ||||||||||||||| | ||||||| || |||| ||||| ||||  ||||||||| || |||| ||||||||||    
T  11421 aaacttggtatccgatccaaggaccaactaatttgaggggatcaatcccatcttccacttgcggggaccccatttaaagcca 11502  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 1066 - 1145
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||||||| |||||||||| || |  |||||||| | |||||| |||||||||| ||||||    
T  1066 tatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaag 1145  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 9309 - 9388
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||||||| |||||||||| || |  |||||||| | |||||| |||||||||| ||||||    
T  9309 tatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaag 9388  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 32475 - 32396
Alignment:
Q  270 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaag 349  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || ||||||||||| | |||| | |||||||||| ||||||    
T  32475 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaag 32396  T

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