View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16328_high_7 (Length: 203)

Name: NF16328_high_7
Description: NF16328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16328_high_7
NF16328_high_7
[»] chr3 (63 HSPs)
chr3 (1-203)||(16806417-16806619)
chr3 (1-202)||(15724426-15724627)
chr3 (1-202)||(16411774-16411975)
chr3 (1-202)||(26791891-26792092)
chr3 (3-202)||(10006039-10006238)
chr3 (3-202)||(10906649-10906848)
chr3 (1-200)||(14126088-14126287)
chr3 (2-199)||(16692602-16692799)
chr3 (3-202)||(13253129-13253328)
chr3 (3-202)||(15588884-15589083)
chr3 (3-202)||(16636212-16636411)
chr3 (3-202)||(43163536-43163735)
chr3 (1-202)||(5424422-5424623)
chr3 (1-202)||(15339706-15339907)
chr3 (1-202)||(20061546-20061747)
chr3 (3-202)||(15347737-15347936)
chr3 (1-203)||(15062181-15062383)
chr3 (1-203)||(16371850-16372051)
chr3 (1-203)||(12498685-12498887)
chr3 (1-203)||(14875989-14876191)
chr3 (1-202)||(53384510-53384711)
chr3 (3-202)||(48425886-48426085)
chr3 (1-203)||(15209328-15209530)
chr3 (1-203)||(15248584-15248786)
chr3 (1-202)||(6601173-6601374)
chr3 (1-202)||(16756077-16756278)
chr3 (1-202)||(15402009-15402203)
chr3 (1-203)||(17490287-17490489)
chr3 (1-202)||(9523156-9523357)
chr3 (1-203)||(16491672-16491874)
chr3 (2-203)||(15015247-15015448)
chr3 (30-172)||(11303284-11303426)
chr3 (24-169)||(14087143-14087288)
chr3 (24-172)||(16836021-16836169)
chr3 (24-169)||(13971634-13971779)
chr3 (106-202)||(14580434-14580530)
chr3 (30-181)||(44777723-44777874)
chr3 (24-181)||(4678908-4679065)
chr3 (24-181)||(13942494-13942651)
chr3 (24-173)||(16827713-16827862)
chr3 (24-181)||(41177992-41178149)
chr3 (24-195)||(10384438-10384609)
chr3 (24-195)||(14574393-14574564)
chr3 (24-181)||(8758584-8758741)
chr3 (71-172)||(12360053-12360154)
chr3 (75-187)||(15228170-15228282)
chr3 (24-172)||(31694697-31694845)
chr3 (24-195)||(47124414-47124585)
chr3 (24-172)||(16380439-16380587)
chr3 (24-172)||(18133857-18134005)
chr3 (24-195)||(16338000-16338171)
chr3 (24-195)||(28754788-28754959)
chr3 (71-172)||(13320013-13320114)
chr3 (30-171)||(31939379-31939520)
chr3 (24-172)||(17493100-17493248)
chr3 (121-180)||(18749232-18749291)
chr3 (126-180)||(8273913-8273967)
chr3 (126-180)||(12792713-12792767)
chr3 (126-180)||(13966854-13966908)
chr3 (126-180)||(15610675-15610729)
chr3 (126-180)||(16742217-16742271)
chr3 (126-180)||(30138378-30138432)
chr3 (126-180)||(30147929-30147983)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-203)||(13317-13519)
[»] chr5 (50 HSPs)
chr5 (1-203)||(18776520-18776722)
chr5 (1-203)||(23574487-23574689)
chr5 (3-202)||(19770712-19770911)
chr5 (3-202)||(41771594-41771793)
chr5 (3-202)||(14999174-14999373)
chr5 (3-202)||(16357254-16357453)
chr5 (3-202)||(27519159-27519358)
chr5 (3-202)||(27684835-27685034)
chr5 (3-202)||(34567246-34567445)
chr5 (1-203)||(23440960-23441162)
chr5 (1-202)||(27611104-27611305)
chr5 (1-202)||(29475508-29475709)
chr5 (3-202)||(40709532-40709731)
chr5 (1-203)||(20800198-20800400)
chr5 (1-202)||(22332322-22332523)
chr5 (1-202)||(22349173-22349374)
chr5 (3-202)||(27667925-27668124)
chr5 (1-202)||(22135418-22135619)
chr5 (3-196)||(37290937-37291130)
chr5 (1-203)||(21881699-21881901)
chr5 (1-203)||(26738161-26738363)
chr5 (1-203)||(25423939-25424140)
chr5 (1-203)||(21338731-21338933)
chr5 (1-203)||(23517276-23517478)
chr5 (3-203)||(20467531-20467731)
chr5 (24-203)||(23472002-23472181)
chr5 (24-169)||(21680246-21680391)
chr5 (24-172)||(17268799-17268947)
chr5 (24-203)||(37542815-37542994)
chr5 (30-172)||(24619760-24619902)
chr5 (30-172)||(24715991-24716133)
chr5 (30-172)||(24749019-24749161)
chr5 (20-196)||(21407907-21408083)
chr5 (24-195)||(14886433-14886604)
chr5 (24-195)||(23079531-23079702)
chr5 (24-195)||(24797839-24798010)
chr5 (24-187)||(21496828-21496991)
chr5 (25-172)||(22235385-22235532)
chr5 (24-195)||(22503434-22503605)
chr5 (75-187)||(21563423-21563535)
chr5 (25-173)||(21890223-21890371)
chr5 (24-195)||(25848830-25849001)
chr5 (121-165)||(25243822-25243866)
chr5 (121-165)||(25307974-25308018)
chr5 (96-167)||(20774586-20774657)
chr5 (96-167)||(22462779-22462850)
chr5 (121-180)||(23504294-23504353)
chr5 (126-180)||(24582067-24582121)
chr5 (106-187)||(20822290-20822371)
chr5 (75-187)||(21831211-21831323)
[»] chr8 (54 HSPs)
chr8 (1-203)||(22040743-22040945)
chr8 (1-203)||(30312839-30313041)
chr8 (1-203)||(22132736-22132938)
chr8 (1-203)||(32601028-32601230)
chr8 (1-203)||(19978851-19979053)
chr8 (3-202)||(19113576-19113775)
chr8 (3-202)||(17673719-17673918)
chr8 (1-202)||(15534264-15534468)
chr8 (3-202)||(19483760-19483959)
chr8 (1-202)||(18857461-18857662)
chr8 (1-203)||(21166233-21166435)
chr8 (1-202)||(22128654-22128855)
chr8 (3-199)||(16407744-16407941)
chr8 (1-202)||(21921432-21921633)
chr8 (1-202)||(22119870-22120071)
chr8 (7-203)||(22988086-22988282)
chr8 (1-203)||(23650925-23651127)
chr8 (1-203)||(21043329-21043531)
chr8 (24-203)||(22248112-22248291)
chr8 (1-142)||(12274445-12274586)
chr8 (1-203)||(21393560-21393762)
chr8 (1-203)||(21788054-21788256)
chr8 (1-203)||(23949803-23950005)
chr8 (24-203)||(22377149-22377328)
chr8 (24-203)||(22383324-22383503)
chr8 (1-203)||(21251825-21252030)
chr8 (21-202)||(20395828-20396002)
chr8 (1-78)||(22164012-22164089)
chr8 (24-172)||(31416200-31416348)
chr8 (24-172)||(23655834-23655982)
chr8 (24-195)||(14566049-14566220)
chr8 (24-195)||(16270927-16271098)
chr8 (30-187)||(19852324-19852481)
chr8 (30-187)||(19858360-19858517)
chr8 (24-181)||(31570559-31570716)
chr8 (24-195)||(27355455-27355626)
chr8 (30-195)||(6604571-6604736)
chr8 (30-195)||(6680024-6680189)
chr8 (24-187)||(20009631-20009793)
chr8 (24-172)||(1267145-1267293)
chr8 (87-187)||(21841387-21841487)
chr8 (24-195)||(803376-803547)
chr8 (121-180)||(22316195-22316254)
chr8 (132-187)||(22371955-22372010)
chr8 (24-193)||(12305665-12305834)
chr8 (87-172)||(22051833-22051918)
chr8 (27-79)||(20652152-20652204)
chr8 (96-172)||(20975377-20975453)
chr8 (71-203)||(29303121-29303253)
chr8 (121-180)||(21196220-21196279)
chr8 (126-180)||(16876813-16876867)
chr8 (126-180)||(21850055-21850109)
chr8 (126-196)||(22623566-22623636)
chr8 (119-172)||(25283132-25283185)
[»] chr7 (54 HSPs)
chr7 (1-203)||(9596864-9597066)
chr7 (1-203)||(16579-16779)
chr7 (3-202)||(13686873-13687072)
chr7 (1-202)||(10871802-10872003)
chr7 (3-202)||(8708414-8708613)
chr7 (3-202)||(18551020-18551219)
chr7 (1-202)||(11236475-11236676)
chr7 (1-202)||(44790613-44790814)
chr7 (6-202)||(18178554-18178750)
chr7 (3-202)||(8199437-8199636)
chr7 (3-202)||(14333206-14333404)
chr7 (3-202)||(15160319-15160518)
chr7 (1-202)||(11552364-11552565)
chr7 (1-202)||(12688308-12688509)
chr7 (1-202)||(23202875-23203076)
chr7 (1-202)||(23509002-23509203)
chr7 (1-202)||(14955365-14955562)
chr7 (5-203)||(14040506-14040704)
chr7 (5-203)||(14350536-14350734)
chr7 (1-203)||(15153918-15154120)
chr7 (24-203)||(11771502-11771681)
chr7 (1-203)||(321298-321500)
chr7 (1-202)||(15204426-15204627)
chr7 (21-203)||(15625379-15625561)
chr7 (94-203)||(14212574-14212683)
chr7 (24-169)||(19613506-19613651)
chr7 (25-166)||(21662792-21662933)
chr7 (24-181)||(23505131-23505288)
chr7 (24-172)||(677-825)
chr7 (24-172)||(13666368-13666516)
chr7 (24-172)||(15341262-15341410)
chr7 (24-181)||(18053214-18053371)
chr7 (24-172)||(14130704-14130852)
chr7 (24-172)||(14434522-14434670)
chr7 (24-172)||(16949742-16949889)
chr7 (121-180)||(4440855-4440914)
chr7 (24-195)||(8211375-8211546)
chr7 (24-187)||(19148042-19148205)
chr7 (24-187)||(20747441-20747604)
chr7 (24-181)||(14263505-14263662)
chr7 (24-172)||(12456533-12456681)
chr7 (24-195)||(11305510-11305681)
chr7 (121-180)||(13354077-13354136)
chr7 (24-195)||(13967915-13968086)
chr7 (121-180)||(14937274-14937333)
chr7 (121-180)||(15364867-15364926)
chr7 (21-187)||(12206055-12206221)
chr7 (92-172)||(14285646-14285726)
chr7 (120-195)||(13022284-13022359)
chr7 (87-178)||(16071558-16071649)
chr7 (24-195)||(49153132-49153303)
chr7 (121-179)||(13455674-13455732)
chr7 (126-180)||(27107058-27107112)
chr7 (27-67)||(13455580-13455620)
[»] chr4 (42 HSPs)
chr4 (1-203)||(18226438-18226640)
chr4 (3-202)||(8387232-8387431)
chr4 (1-202)||(14302971-14303172)
chr4 (3-202)||(8052616-8052815)
chr4 (3-202)||(12477420-12477619)
chr4 (3-202)||(23956567-23956766)
chr4 (3-202)||(29038397-29038596)
chr4 (1-202)||(40473858-40474059)
chr4 (3-202)||(19777786-19777985)
chr4 (3-202)||(27712156-27712355)
chr4 (1-202)||(14681385-14681586)
chr4 (3-202)||(18298025-18298224)
chr4 (1-196)||(12524494-12524689)
chr4 (1-203)||(15146877-15147079)
chr4 (1-203)||(16354437-16354639)
chr4 (2-203)||(14160289-14160490)
chr4 (24-203)||(14850358-14850537)
chr4 (1-203)||(7091250-7091452)
chr4 (2-196)||(1639424-1639618)
chr4 (132-203)||(14695062-14695133)
chr4 (93-155)||(18614849-18614911)
chr4 (24-195)||(15078476-15078647)
chr4 (24-195)||(15002624-15002795)
chr4 (31-172)||(1648560-1648701)
chr4 (71-172)||(15358403-15358504)
chr4 (21-187)||(8706756-8706922)
chr4 (30-195)||(20891829-20891994)
chr4 (31-187)||(27901234-27901390)
chr4 (24-195)||(3264054-3264225)
chr4 (24-195)||(11206491-11206662)
chr4 (24-195)||(29452797-29452968)
chr4 (24-172)||(15246765-15246913)
chr4 (87-186)||(15320054-15320153)
chr4 (24-195)||(33223764-33223935)
chr4 (21-187)||(15414294-15414460)
chr4 (1-42)||(16251598-16251639)
chr4 (106-169)||(16148634-16148697)
chr4 (106-169)||(16152780-16152843)
chr4 (126-180)||(9291778-9291832)
chr4 (24-90)||(14691743-14691809)
chr4 (126-180)||(15292433-15292487)
chr4 (170-203)||(18614816-18614849)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-203)||(66254-66456)
scaffold0042 (1-203)||(39075-39277)
[»] chr6 (48 HSPs)
chr6 (1-203)||(27566377-27566579)
chr6 (3-202)||(29591318-29591517)
chr6 (3-202)||(16626115-16626314)
chr6 (3-202)||(24312566-24312765)
chr6 (1-202)||(25113234-25113435)
chr6 (3-202)||(2874201-2874400)
chr6 (1-203)||(19865369-19865571)
chr6 (1-202)||(1542482-1542683)
chr6 (1-202)||(28262595-28262796)
chr6 (1-202)||(28341344-28341545)
chr6 (1-200)||(16962845-16963044)
chr6 (3-202)||(27188120-27188319)
chr6 (3-202)||(27260921-27261120)
chr6 (1-203)||(5838616-5838818)
chr6 (1-203)||(22078087-22078289)
chr6 (1-203)||(27330830-27331032)
chr6 (1-203)||(27391570-27391772)
chr6 (3-203)||(22434553-22434753)
chr6 (3-203)||(22442951-22443151)
chr6 (1-203)||(18407339-18407541)
chr6 (1-203)||(22761852-22762054)
chr6 (1-203)||(20636698-20636900)
chr6 (1-203)||(25609258-25609460)
chr6 (1-203)||(23079151-23079353)
chr6 (1-200)||(16927040-16927239)
chr6 (1-149)||(28291823-28291971)
chr6 (1-203)||(15896776-15896978)
chr6 (24-203)||(18197122-18197304)
chr6 (25-196)||(18966696-18966867)
chr6 (24-172)||(18795395-18795543)
chr6 (24-172)||(19880003-19880151)
chr6 (24-187)||(25768896-25769059)
chr6 (24-181)||(28282232-28282389)
chr6 (24-172)||(19435707-19435855)
chr6 (23-195)||(18436309-18436485)
chr6 (21-187)||(19488685-19488851)
chr6 (156-202)||(28288071-28288117)
chr6 (24-173)||(8762360-8762509)
chr6 (31-172)||(34645014-34645155)
chr6 (31-172)||(14380895-14381036)
chr6 (24-172)||(5296634-5296782)
chr6 (121-180)||(18837328-18837387)
chr6 (30-172)||(19454131-19454273)
chr6 (121-180)||(18572453-18572512)
chr6 (126-180)||(14624777-14624831)
chr6 (126-180)||(16381793-16381847)
chr6 (126-180)||(23997055-23997109)
chr6 (119-180)||(16098850-16098911)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-203)||(3660-3862)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-203)||(9445-9647)
scaffold0109 (1-203)||(32828-33030)
[»] chr2 (43 HSPs)
chr2 (1-203)||(21325058-21325260)
chr2 (1-202)||(24710483-24710684)
chr2 (3-202)||(41608178-41608377)
chr2 (1-202)||(21144834-21145035)
chr2 (3-202)||(9610587-9610786)
chr2 (3-202)||(22324649-22324848)
chr2 (3-202)||(24262821-24263020)
chr2 (3-202)||(27371720-27371919)
chr2 (3-202)||(10869301-10869500)
chr2 (1-202)||(16925809-16926010)
chr2 (1-202)||(16999449-16999650)
chr2 (1-202)||(24876542-24876743)
chr2 (5-202)||(27218469-27218666)
chr2 (3-202)||(16923340-16923539)
chr2 (3-202)||(16982603-16982802)
chr2 (3-202)||(17064168-17064367)
chr2 (3-202)||(17067826-17068025)
chr2 (1-203)||(24707274-24707476)
chr2 (1-202)||(44385362-44385563)
chr2 (1-203)||(22756257-22756459)
chr2 (1-203)||(23107522-23107724)
chr2 (1-203)||(24675938-24676140)
chr2 (1-203)||(21890510-21890712)
chr2 (1-203)||(23066840-23067042)
chr2 (24-203)||(24819478-24819657)
chr2 (21-196)||(45529980-45530155)
chr2 (21-196)||(30210716-30210890)
chr2 (24-169)||(27364905-27365050)
chr2 (24-172)||(23277248-23277396)
chr2 (24-195)||(1064223-1064394)
chr2 (24-181)||(27788213-27788370)
chr2 (24-181)||(12574825-12574982)
chr2 (24-172)||(24949061-24949209)
chr2 (71-172)||(19651875-19651976)
chr2 (24-195)||(11357674-11357845)
chr2 (121-180)||(12640048-12640107)
chr2 (96-167)||(27210000-27210071)
chr2 (24-195)||(20828731-20828902)
chr2 (24-195)||(20833457-20833628)
chr2 (121-180)||(24569483-24569542)
chr2 (24-195)||(31831130-31831301)
chr2 (132-180)||(23816858-23816906)
chr2 (132-180)||(24831003-24831051)
[»] chr1 (29 HSPs)
chr1 (1-203)||(16077980-16078182)
chr1 (1-203)||(17044339-17044541)
chr1 (3-196)||(21837785-21837978)
chr1 (3-202)||(16349924-16350123)
chr1 (3-202)||(51332818-51333017)
chr1 (1-202)||(21831136-21831337)
chr1 (3-202)||(41352987-41353186)
chr1 (1-203)||(21749774-21749976)
chr1 (5-202)||(33390354-33390551)
chr1 (1-202)||(19107201-19107402)
chr1 (1-203)||(50619568-50619770)
chr1 (1-203)||(20139663-20139865)
chr1 (1-203)||(20250635-20250836)
chr1 (1-203)||(22361568-22361770)
chr1 (24-203)||(16373385-16373564)
chr1 (24-203)||(22109878-22110057)
chr1 (24-203)||(22113727-22113906)
chr1 (69-203)||(21025074-21025208)
chr1 (1-196)||(19760204-19760392)
chr1 (3-100)||(20937749-20937846)
chr1 (24-172)||(20835243-20835391)
chr1 (24-172)||(20939418-20939566)
chr1 (24-170)||(19855161-19855307)
chr1 (24-172)||(19662492-19662640)
chr1 (24-172)||(24098958-24099106)
chr1 (24-195)||(20295268-20295439)
chr1 (24-195)||(21951765-21951936)
chr1 (24-195)||(31539329-31539500)
chr1 (126-180)||(20830739-20830793)
[»] scaffold0091 (1 HSPs)
scaffold0091 (1-198)||(8639-8836)
[»] scaffold0284 (1 HSPs)
scaffold0284 (1-203)||(22716-22918)
[»] scaffold0501 (1 HSPs)
scaffold0501 (1-203)||(3043-3245)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-203)||(181048-181250)
scaffold0020 (24-161)||(100849-100986)
[»] scaffold0017 (3 HSPs)
scaffold0017 (29-203)||(56894-57068)
scaffold0017 (2-203)||(196733-196934)
scaffold0017 (45-203)||(19322-19480)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-202)||(7788-7989)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-203)||(63286-63488)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-202)||(109067-109268)
scaffold0029 (24-170)||(113431-113577)
scaffold0029 (96-166)||(95294-95364)
[»] scaffold0028 (6 HSPs)
scaffold0028 (1-202)||(44003-44204)
scaffold0028 (1-202)||(9323-9524)
scaffold0028 (1-202)||(15785-15986)
scaffold0028 (24-169)||(49803-49948)
scaffold0028 (119-202)||(872-955)
scaffold0028 (121-180)||(105851-105910)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-203)||(112743-112945)
scaffold0040 (24-203)||(15749-15928)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-203)||(278085-278287)
scaffold0005 (24-172)||(261180-261328)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-202)||(1263-1464)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-202)||(8215-8416)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-196)||(8246-8441)
scaffold0080 (70-203)||(49101-49234)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-196)||(3719-3914)
scaffold0023 (1-203)||(28627-28829)
scaffold0023 (1-203)||(130956-131158)
scaffold0023 (49-203)||(59652-59806)
[»] scaffold0333 (1 HSPs)
scaffold0333 (1-203)||(16504-16706)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-203)||(25823-26025)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-203)||(79749-79951)
[»] scaffold0894 (1 HSPs)
scaffold0894 (1-203)||(3223-3425)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-203)||(229892-230094)
scaffold0012 (24-203)||(218672-218851)
[»] scaffold0676 (1 HSPs)
scaffold0676 (1-203)||(6863-7065)
[»] scaffold0228 (1 HSPs)
scaffold0228 (1-203)||(545-747)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-203)||(78-280)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-203)||(24347-24549)
[»] scaffold0081 (3 HSPs)
scaffold0081 (1-203)||(19451-19653)
scaffold0081 (1-203)||(34875-35077)
scaffold0081 (1-203)||(50281-50483)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-203)||(32008-32210)
[»] scaffold0375 (1 HSPs)
scaffold0375 (1-203)||(3069-3271)
[»] scaffold0120 (4 HSPs)
scaffold0120 (1-203)||(12907-13109)
scaffold0120 (1-203)||(6872-7071)
scaffold0120 (126-173)||(836-883)
scaffold0120 (126-180)||(23150-23204)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-203)||(7586-7788)
[»] scaffold0403 (2 HSPs)
scaffold0403 (1-203)||(7221-7423)
scaffold0403 (25-193)||(3664-3832)
[»] scaffold0358 (1 HSPs)
scaffold0358 (1-203)||(6898-7100)
[»] scaffold0084 (1 HSPs)
scaffold0084 (5-203)||(6074-6272)
[»] scaffold0396 (1 HSPs)
scaffold0396 (14-203)||(4893-5082)
[»] scaffold1602 (1 HSPs)
scaffold1602 (1-203)||(1322-1524)
[»] scaffold0379 (1 HSPs)
scaffold0379 (1-203)||(7146-7348)
[»] scaffold0331 (1 HSPs)
scaffold0331 (1-203)||(17232-17434)
[»] scaffold0114 (3 HSPs)
scaffold0114 (1-203)||(19596-19798)
scaffold0114 (24-172)||(20772-20920)
scaffold0114 (93-172)||(45458-45537)
[»] scaffold0719 (1 HSPs)
scaffold0719 (66-202)||(190-326)
[»] scaffold0011 (4 HSPs)
scaffold0011 (28-203)||(25788-25963)
scaffold0011 (24-172)||(149442-149590)
scaffold0011 (30-172)||(194990-195132)
scaffold0011 (126-180)||(180898-180952)
[»] scaffold0006 (1 HSPs)
scaffold0006 (12-203)||(102093-102284)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-203)||(29794-29996)
scaffold0026 (87-175)||(28992-29080)
[»] scaffold1355 (1 HSPs)
scaffold1355 (1-203)||(1525-1727)
[»] scaffold0324 (2 HSPs)
scaffold0324 (1-203)||(19257-19459)
scaffold0324 (93-203)||(14466-14576)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-203)||(8342-8544)
[»] scaffold0270 (2 HSPs)
scaffold0270 (26-203)||(4745-4922)
scaffold0270 (26-203)||(11875-12052)
[»] scaffold0037 (1 HSPs)
scaffold0037 (23-203)||(116160-116340)
[»] scaffold0359 (1 HSPs)
scaffold0359 (24-203)||(17553-17732)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-203)||(1742-1944)
[»] scaffold0074 (1 HSPs)
scaffold0074 (24-202)||(4012-4190)
[»] scaffold0100 (1 HSPs)
scaffold0100 (25-202)||(24975-25152)
[»] scaffold0507 (1 HSPs)
scaffold0507 (24-203)||(9842-10021)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-169)||(390489-390656)
[»] scaffold0411 (1 HSPs)
scaffold0411 (25-203)||(14334-14512)
[»] scaffold0243 (1 HSPs)
scaffold0243 (49-203)||(26199-26353)
[»] scaffold0010 (3 HSPs)
scaffold0010 (49-203)||(2811-2965)
scaffold0010 (24-195)||(41596-41767)
scaffold0010 (25-172)||(46685-46832)
[»] scaffold0647 (1 HSPs)
scaffold0647 (21-202)||(1777-1958)
[»] scaffold0319 (1 HSPs)
scaffold0319 (1-203)||(2114-2320)
[»] scaffold0342 (1 HSPs)
scaffold0342 (24-203)||(18470-18646)
[»] scaffold0056 (1 HSPs)
scaffold0056 (69-203)||(4608-4742)
[»] scaffold0621 (1 HSPs)
scaffold0621 (3-176)||(2318-2491)
[»] scaffold0018 (2 HSPs)
scaffold0018 (24-203)||(11452-11631)
scaffold0018 (24-203)||(17644-17823)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-90)||(15209-15298)
scaffold0044 (1-90)||(1469-1558)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-151)||(1-151)
[»] scaffold0106 (3 HSPs)
scaffold0106 (1-147)||(14888-15034)
scaffold0106 (1-79)||(18234-18312)
scaffold0106 (25-172)||(32283-32431)
[»] scaffold0083 (1 HSPs)
scaffold0083 (119-203)||(10271-10355)
[»] scaffold0730 (1 HSPs)
scaffold0730 (33-196)||(4854-5017)
[»] scaffold0476 (2 HSPs)
scaffold0476 (1-112)||(10166-10277)
scaffold0476 (71-172)||(2616-2717)
[»] scaffold0156 (1 HSPs)
scaffold0156 (24-172)||(28097-28245)
[»] scaffold0053 (2 HSPs)
scaffold0053 (24-172)||(57133-57281)
scaffold0053 (24-187)||(48305-48468)
[»] scaffold2094 (1 HSPs)
scaffold2094 (30-187)||(333-490)
[»] scaffold0076 (3 HSPs)
scaffold0076 (24-169)||(32966-33111)
scaffold0076 (24-172)||(56186-56334)
scaffold0076 (126-180)||(41232-41286)
[»] scaffold1061 (1 HSPs)
scaffold1061 (25-172)||(2461-2608)
[»] scaffold0249 (1 HSPs)
scaffold0249 (24-187)||(1243-1406)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-112)||(39357-39468)
[»] scaffold0068 (1 HSPs)
scaffold0068 (24-169)||(34060-34205)
[»] scaffold0007 (1 HSPs)
scaffold0007 (21-166)||(85811-85955)
[»] scaffold1710 (1 HSPs)
scaffold1710 (24-172)||(736-884)
[»] scaffold0751 (1 HSPs)
scaffold0751 (24-196)||(3048-3220)
[»] scaffold0239 (1 HSPs)
scaffold0239 (24-172)||(12072-12220)
[»] scaffold0122 (1 HSPs)
scaffold0122 (143-203)||(39158-39218)
[»] scaffold0049 (1 HSPs)
scaffold0049 (24-187)||(51134-51297)
[»] scaffold0404 (1 HSPs)
scaffold0404 (24-195)||(5622-5793)
[»] scaffold0192 (1 HSPs)
scaffold0192 (24-187)||(27396-27559)
[»] scaffold0113 (1 HSPs)
scaffold0113 (30-172)||(25151-25293)
[»] scaffold0035 (1 HSPs)
scaffold0035 (30-172)||(3629-3771)
[»] scaffold0261 (1 HSPs)
scaffold0261 (21-170)||(22664-22813)
[»] scaffold0232 (1 HSPs)
scaffold0232 (30-195)||(949-1114)
[»] scaffold0742 (1 HSPs)
scaffold0742 (24-172)||(6085-6233)
[»] scaffold0298 (3 HSPs)
scaffold0298 (24-172)||(11343-11491)
scaffold0298 (24-172)||(15113-15261)
scaffold0298 (30-172)||(20861-21003)
[»] scaffold0126 (1 HSPs)
scaffold0126 (24-172)||(41789-41937)
[»] scaffold0077 (1 HSPs)
scaffold0077 (24-172)||(20727-20875)
[»] scaffold0067 (3 HSPs)
scaffold0067 (92-172)||(51466-51546)
scaffold0067 (92-172)||(60500-60580)
scaffold0067 (92-172)||(66888-66968)
[»] scaffold0034 (3 HSPs)
scaffold0034 (24-172)||(4239-4387)
scaffold0034 (24-172)||(13187-13335)
scaffold0034 (31-187)||(68249-68405)
[»] scaffold0708 (1 HSPs)
scaffold0708 (24-195)||(7408-7579)
[»] scaffold0682 (1 HSPs)
scaffold0682 (96-167)||(827-898)
[»] scaffold0523 (1 HSPs)
scaffold0523 (24-175)||(741-892)
[»] scaffold0309 (1 HSPs)
scaffold0309 (24-195)||(10665-10836)
[»] scaffold0165 (1 HSPs)
scaffold0165 (24-175)||(5302-5453)
[»] scaffold0101 (1 HSPs)
scaffold0101 (24-187)||(4723-4886)
[»] scaffold0585 (1 HSPs)
scaffold0585 (77-175)||(6319-6417)
[»] scaffold0130 (1 HSPs)
scaffold0130 (21-187)||(10079-10245)
[»] scaffold0367 (1 HSPs)
scaffold0367 (24-172)||(6524-6672)
[»] scaffold0222 (2 HSPs)
scaffold0222 (24-172)||(2641-2789)
scaffold0222 (24-172)||(7932-8080)
[»] scaffold0102 (1 HSPs)
scaffold0102 (24-172)||(40610-40758)
[»] scaffold0004 (2 HSPs)
scaffold0004 (96-172)||(323648-323724)
scaffold0004 (21-187)||(202739-202905)
[»] scaffold0215 (1 HSPs)
scaffold0215 (145-196)||(29816-29867)
[»] scaffold0093 (1 HSPs)
scaffold0093 (24-195)||(27133-27304)
[»] scaffold0089 (1 HSPs)
scaffold0089 (24-195)||(15976-16147)
[»] scaffold0058 (1 HSPs)
scaffold0058 (24-187)||(19992-20155)
[»] scaffold0282 (1 HSPs)
scaffold0282 (49-143)||(15738-15832)
[»] scaffold0124 (2 HSPs)
scaffold0124 (24-172)||(13070-13220)
scaffold0124 (126-180)||(7086-7140)
[»] scaffold0064 (1 HSPs)
scaffold0064 (21-175)||(40042-40196)
[»] scaffold0071 (1 HSPs)
scaffold0071 (92-181)||(48483-48572)
[»] scaffold0203 (1 HSPs)
scaffold0203 (24-172)||(13585-13733)
[»] scaffold0090 (2 HSPs)
scaffold0090 (96-172)||(19793-19869)
scaffold0090 (96-172)||(23955-24031)
[»] scaffold0009 (1 HSPs)
scaffold0009 (24-172)||(249485-249633)
[»] scaffold0235 (3 HSPs)
scaffold0235 (121-180)||(26775-26834)
scaffold0235 (106-172)||(10743-10809)
scaffold0235 (106-172)||(20957-21023)
[»] scaffold0218 (1 HSPs)
scaffold0218 (121-180)||(3222-3281)
[»] scaffold0104 (2 HSPs)
scaffold0104 (24-195)||(20266-20437)
scaffold0104 (24-195)||(23086-23257)
[»] scaffold0348 (1 HSPs)
scaffold0348 (96-166)||(7128-7198)
[»] scaffold0139 (3 HSPs)
scaffold0139 (119-172)||(28184-28237)
scaffold0139 (119-172)||(34437-34490)
scaffold0139 (24-187)||(420-583)
[»] scaffold1646 (1 HSPs)
scaffold1646 (25-172)||(197-344)
[»] scaffold0876 (1 HSPs)
scaffold0876 (121-180)||(3511-3570)
[»] scaffold0369 (1 HSPs)
scaffold0369 (121-180)||(431-490)
[»] scaffold0207 (1 HSPs)
scaffold0207 (121-180)||(19016-19075)
[»] scaffold0162 (1 HSPs)
scaffold0162 (121-180)||(13877-13936)
[»] scaffold0692 (1 HSPs)
scaffold0692 (126-180)||(3153-3207)
[»] scaffold0483 (1 HSPs)
scaffold0483 (24-90)||(12366-12432)
[»] scaffold0244 (1 HSPs)
scaffold0244 (30-195)||(18226-18392)
[»] scaffold0225 (1 HSPs)
scaffold0225 (126-180)||(24368-24422)
[»] scaffold0213 (1 HSPs)
scaffold0213 (126-172)||(5622-5668)
[»] scaffold0060 (1 HSPs)
scaffold0060 (24-193)||(43655-43824)
[»] scaffold0008 (1 HSPs)
scaffold0008 (27-79)||(24755-24807)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 8e-97; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16806619 - 16806417
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  16806619 catctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaactgtgccacatcacgtttcaa 16806520  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16806519 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcctagatgaatactcaagctacttctatgactctcttcaagaatcattttc 16806420  T
Q  201 ttc 203  Q
    |||    
T  16806419 ttc 16806417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15724627 - 15724426
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  15724627 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 15724528  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  15724527 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 15724428  T
Q  201 tt 202  Q
    ||    
T  15724427 tt 15724426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16411975 - 16411774
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  16411975 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 16411876  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  16411875 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 16411776  T
Q  201 tt 202  Q
    ||    
T  16411775 tt 16411774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 26792092 - 26791891
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  26792092 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 26791993  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  26791992 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 26791893  T
Q  201 tt 202  Q
    ||    
T  26791892 tt 26791891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 10006039 - 10006238
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  10006039 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 10006138  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10006139 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 10006238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 10906649 - 10906848
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  10906649 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 10906748  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10906749 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 10906848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14126287 - 14126088
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| |||| ||||| |||||||||    
T  14126287 catctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacgggaatacacaaactgtgtcacatcacgtttcaa 14126188  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||    
T  14126187 tccagaccaccagaaaatcttctttaaatcttgatacatcttcgtagctcccggttgaatgctcaagctacttctatgactctcttcaagaatcattttc 14126088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 16692602 - 16692799
Alignment:
Q  2 atctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||  || ||||||    
T  16692602 atctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaactgcgccacatctcgcttcaaa 16692701  T
Q  102 ccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcatttt 199  Q
    ||| |||||||||||||||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  16692702 ccagaccaccagaaaatcttctttaagtcctgatacatcttcgtagctctcggatgaatactcaagctacttctatgactctcttcaagaatcatttt 16692799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 13253129 - 13253328
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  13253129 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 13253228  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13253229 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 13253328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 15589083 - 15588884
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  15589083 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 15588984  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15588983 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 15588884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 16636212 - 16636411
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  16636212 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 16636311  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16636312 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 16636411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 43163536 - 43163735
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  43163536 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 43163635  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43163636 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 43163735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 5424623 - 5424422
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  5424623 catctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 5424524  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  5424523 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 5424424  T
Q  201 tt 202  Q
    ||    
T  5424423 tt 5424422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15339706 - 15339907
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  15339706 catctaaaggtaccatcattccagcgggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 15339805  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  15339806 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 15339905  T
Q  201 tt 202  Q
    ||    
T  15339906 tt 15339907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20061747 - 20061546
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  20061747 catctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 20061648  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||    
T  20061647 accagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcctcaagaatcatcttc 20061548  T
Q  201 tt 202  Q
    ||    
T  20061547 tt 20061546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 15347936 - 15347737
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  15347936 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 15347837  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  15347836 cagaccaccagaaaatcttctttaaatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcgagaatcatcttctt 15347737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15062181 - 15062383
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||| | |||||||| | |||||||    
T  15062181 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaactatgccacatcaagtttcaa 15062280  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||    
T  15062281 tccagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctactcctatgactctcttcaagaatcattttc 15062380  T
Q  201 ttc 203  Q
    |||    
T  15062381 ttc 15062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 16371850 - 16372051
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||| ||||||||||  ||||||||    
T  16371850 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaactgtgccacatcgcgtttcaa 16371949  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  16371950 -ccagaccaccagaatatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 16372048  T
Q  201 ttc 203  Q
    |||    
T  16372049 ttc 16372051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12498685 - 12498887
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||||||||||||||| | || ||||||||||||||||||||| || ||||||||||||||||||||||  | ||||||    
T  12498685 catctaacgataccatcataccagcaggtttctgatgtttaatcttcgacttctgacaaactaaacaagaatacacaaattgtgccacatcgcatttcaa 12498784  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||    
T  12498785 tccagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcctcaagaatcattttc 12498884  T
Q  201 ttc 203  Q
    |||    
T  12498885 ttc 12498887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 14876191 - 14875989
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||| |||||||||||||| |||||||||| |||||||||    
T  14876191 catctaaagataccatcataccagcaggtttctgatgttcaatcttcaacttctgataaactaaacaggaatacacaaactgtgccacatcacgtttcaa 14876092  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||| ||||| | ||| ||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||    
T  14876091 accagaccaccagaaaattttcttcagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctataactcttttcaagaatcattttc 14875992  T
Q  201 ttc 203  Q
    |||    
T  14875991 ttc 14875989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 53384711 - 53384510
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||| |||| ||||||||| ||||| |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  53384711 catccaaaggtaccatcatcccagcgggtttctgatgctcgacctttgacttctgacaaactaagcaggaatacacaaactgtgccacatctcgtttcaa 53384612  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  53384611 accagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 53384512  T
Q  201 tt 202  Q
    ||    
T  53384511 tt 53384510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 48425886 - 48426085
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| ||||| |||||||| ||||||||||  ||||||||||    
T  48425886 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggattacacaaactgtgccacatctcgtttcaaac 48425985  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48425986 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 48426085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15209328 - 15209530
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||  || |||||||||||||| || ||||||| |||||||||    
T  15209328 catctaaagataccatcatcccagcaggtttctgatgctcaattttcgacttctgacaaatcaaacaggaatacacaaactgcgccacatcacgtttcaa 15209427  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15209428 cccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagcacccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 15209527  T
Q  201 ttc 203  Q
    |||    
T  15209528 ttc 15209530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15248584 - 15248786
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||||  || |||||||||||||| |||||||||| |||||||||    
T  15248584 catctaaagataccatcatcccagcaggtttttgatgctcaactttcgacttctgacaaatcaaacaggaatacacaaactgtgccacatcacgtttcaa 15248683  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||    
T  15248684 cccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactttcttcaagaatcatcttc 15248783  T
Q  201 ttc 203  Q
    |||    
T  15248784 ttc 15248786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 6601173 - 6601374
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||| |||| ||||||||| ||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||   |||||||    
T  6601173 catccaaaggtaccatcatcccagcgggtttctgatgctcgaccttcgacttctgacaaactaaacaggaatacacaaactgtgccacatcttgtttcaa 6601272  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    || | ||||||| ||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  6601273 actagaccaccaaaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 6601372  T
Q  201 tt 202  Q
    ||    
T  6601373 tt 6601374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16756278 - 16756077
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||| |||| ||||||||| ||||| |||||||||||||| | |||||||| |||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  16756278 catccaaaggtaccatcatcccagcgggtttctgatgctcgaccttcgactcctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 16756179  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||| |||||||||||| |||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  16756178 accagacccccagaaaatcttttttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 16756079  T
Q  201 tt 202  Q
    ||    
T  16756078 tt 16756077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15402203 - 15402009
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||  ||||||       ||||||| |||||||||||||| ||||||||||  ||||||||    
T  15402203 catctaaaggtaccatcattccagcgggtttctgatgctcaactttcgac-------aaactaaacaggaatacacaaactgtgccacatctcgtttcaa 15402111  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  15402110 accagaccaccagaaaatattctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 15402011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17490287 - 17490489
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||  || || ||||||||||| |  || || |  ||||||||    
T  17490287 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaactaagcaacgtcgcgtttcaa 17490386  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  17490387 tccggaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcattttc 17490486  T
Q  201 ttc 203  Q
    |||    
T  17490487 ttc 17490489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 9523156 - 9523357
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| | || |||||||||||||||||||||||||||||  ||||||||||||||||  || || ||||||||||| ||||| |||| |||||| |     
T  9523156 catctaatggtatcatcataccagcaggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaactgtgcaacatcacgtttgag 9523255  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | ||||||| || | |||||||| ||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9523256 tctagaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccgaatgaatactcaagttacttctatgactctcttcaagaatcattttc 9523355  T
Q  201 tt 202  Q
    ||    
T  9523356 tt 9523357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16491874 - 16491672
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  || || ||||||||||| ||||| || |  |||| |||    
T  16491874 catctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaactgtgcaacgtcgcgttacaa 16491775  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     |   ||||||| || |  ||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||| ||||   ||||||||||||||| |||    
T  16491774 tctggaccaccaaaacaaattctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttttatggtactcttcaagaatcatcttc 16491675  T
Q  201 ttc 203  Q
    |||    
T  16491674 ttc 16491672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 2 - 203
Target Start/End: Complemental strand, 15015448 - 15015247
Alignment:
Q  2 atctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa 101  Q
    ||||||||||  || ||| ||| |||||||||| || ||||  |||||||||||||||| ||| || | ||||||||||||||||||||  || |||||     
T  15015448 atctaaagatgtcaacatcccaacaggtttctggtgttcaactttcgacttctgacaaattaaacacgcatacacaaattgtgccacatctcgcttcaac 15015349  T
Q  102 ccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttct 201  Q
    |  |||||||| || | |||||| ||||| |||||||| || ||||||||| |||||||||||||  ||||||| ||| | ||||| | |||||| ||||    
T  15015348 ctgaaccaccaaaataacttcttcaaatcatgatacatttttgtagctcccggatgaatactcaaattacttctgtgaatttcttccataatcatcttct 15015249  T
Q  202 tc 203  Q
    ||    
T  15015248 tc 15015247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 11303426 - 11303284
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| ||||||||||||   || || | ||||||||| || || |||| || |||||| ||  ||||||| || | |||||| ||||    
T  11303426 ttctgatgctcaaccttagacttctgacaagtcaaacacgcatacacaaactgagcaacatcacatttcaacccggaccaccaaaatagcttcttcaaat 11303327  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | |||||||| ||||||||||||||||||||||||||||||||    
T  11303326 catgatacattttcgtagctcccagatgaatactcaagctact 11303284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 14087143 - 14087288
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||| |||| ||| |||||||| |||   || || | |||||||||||| || |||| ||| |||||||||  |||||| || | ||| |    
T  14087143 gcaggtttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaattgagcaacatcacgcttcaaaccaggccaccaaaacagctttt 14087242  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||    
T  14087243 tcaaatcgtgatacatcttcgtagctcccggatggatactcaagct 14087288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 16836169 - 16836021
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||||||||| || || |||| ||| ||||||||  ||||||| || | ||| |    
T  16836169 gcaggcttctgatgctcaaccttagacttctgacaagtgaagcacgcatacacaaaatgagcgacatcacgcttcaaaccggaccaccaaaacaactttt 16836070  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || || ||||||||||||||||||||  |||||||||||||||||||    
T  16836069 tcaactcatgatacatcttcgtagctccgggatgaatactcaagctact 16836021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 13971779 - 13971634
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   || || | |||||||||||| || |||| ||| ||||||||| ||||||| || | ||| |    
T  13971779 gcaggcttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaattgagcaacatcacgcttcaaaccagaccaccaaaacagctttt 13971680  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | || |||||||||||||||||||||||| |||| |||||||||||    
T  13971679 tcaagtcgtgatacatcttcgtagctcccggatggatactcaagct 13971634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 14580530 - 14580434
Alignment:
Q  106 accaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    ||||||| || | |||||| ||||| |||||||| |||||||||||  | |||||||||||||||||||| |||||||| ||||||||||| |||||    
T  14580530 accaccaaaacaacttcttcaaatcatgatacattttcgtagctcctgggtgaatactcaagctacttctgtgactctcctcaagaatcatcttctt 14580434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 181
Target Start/End: Original strand, 44777723 - 44777874
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    |||||||| |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| || ||||    
T  44777723 ttctgatgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttttcaaat 44777822  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    ||||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  44777823 cgtgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 44777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 4678908 - 4679065
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  4678908 gcaggtttctggtgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 4679007  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  4679008 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 4679065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 13942494 - 13942651
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||| |||| ||| ||||||||||||  ||| || | |||||| || || || ||||  || ||||| ||| ||||||| || | ||| |    
T  13942494 gcaggtttctgatgttcaaccttagacttctgacaagttaaacatgcatacacgaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 13942593  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  13942594 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 13942651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 16827862 - 16827713
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  16827862 gcaggcttctgatgctcaaccttggacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatttct 16827763  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctactt 173  Q
    | ||||| |||||||| || ||||||||| |||||||||| |||||||||    
T  16827762 tcaaatcatgatacatttttgtagctccctgatgaatacttaagctactt 16827713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 41177992 - 41178149
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  41177992 gcaggtttctggtgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 41178091  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  41178092 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 41178149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 10384438 - 10384609
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  10384438 gcaggcttctgatgctcaaccttagacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacaatttct 10384537  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  10384538 tcaaatcatggtacatctttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 10384609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 14574393 - 14574564
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| |||||  | || ||||  |||||||| ||| ||||||| || |  ||||    
T  14574393 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaaccgagcaacatctcgtttcaacccagaccaccaaaacaatttct 14574492  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | || |||||||||||||| ||||||||| |||||||||| ||||||||  | ||||| ||||| |||||||    
T  14574493 tcaagtcgtgatacatctttgtagctcccggatgaatacttaagctactcttgtgactttcttctagaatca 14574564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 8758741 - 8758584
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || ||||  || ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  8758741 gcaggtttctggtgttcaactttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacaactttt 8758642  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  8758641 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 8758584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 12360154 - 12360053
Alignment:
Q  71 atacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    ||||||||| || || || | ||| ||||||||  ||||||| || | |||||| ||||| |||||||| |||||||||||| |||||||||||||||||    
T  12360154 atacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttcttcaaatcatgatacattttcgtagctcccggatgaatactcaagcta 12360055  T
Q  171 ct 172  Q
    ||    
T  12360054 ct 12360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 15228170 - 15228282
Alignment:
Q  75 acaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttc 174  Q
    ||||| ||||| |||| ||||||||||||  ||||||| || |  ||||| || || |||||||||||  |||||||| |||||||||| ||||||||||    
T  15228170 acaaactgtgcaacatcacgtttcaaaccggaccaccaaaacaatttcttcaagtcatgatacatctttatagctcccggatgaatacttaagctacttc 15228269  T
Q  175 tatgactctcttc 187  Q
    | ||||| |||||    
T  15228270 tgtgactttcttc 15228282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 31694845 - 31694697
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||| ||||||   || || | ||||||||| || || || | ||||||||||||  ||||||| || | |||||    
T  31694845 gcaggcttctgatgttcaaccttagacttttgacaagtcaaacatgcatacacaaaatgagcgacgtcacgtttcaaaccggaccaccaaaacaacttct 31694746  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | | ||| | ||||||||| ||||||||| |||||||||||||||||||    
T  31694745 tcagatcataatacatctttgtagctcccggatgaatactcaagctact 31694697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 47124414 - 47124585
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || | |||||    
T  47124414 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatcccttttcaaaccggaccaccaaaacagcttct 47124513  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  47124514 tcaaatcatggtacatttttgtagcccctgggtgaatactcaacctactcttgtgactctcctcaagaatca 47124585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 16380587 - 16380439
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| || |||||||||| ||| |||||||| |||   ||||| | ||||||||| || || ||||  |  ||||| ||  ||||||| || | ||| |    
T  16380587 gcaggcttttgatgctcaaccttagacttctggcaagtcaagcatgcatacacaaaatgagcgacatctcaattcaacccgtaccaccaaaacagctttt 16380488  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||||    
T  16380487 tcaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 16380439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 18134005 - 18133857
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||| ||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  18134005 gcaggcttctaatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 18133906  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||| ||||||||  |||||||||| ||||||||    
T  18133905 tcaaatcatgatacatctttgtagctcctggatgaatacttaagctact 18133857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 16338171 - 16338000
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||||||||  || ||||||| ||||   || || | ||| ||||| || || ||||  |||||||||||  ||||||| || |  ||||    
T  16338171 gcaggcttctgatgctcaactttagacttctaacaagtcaaacaagcataaacaaactgagcaacatctcgtttcaaaccggaccaccaaaacagtttct 16338072  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | | ||| || |||||||| ||||| ||||| ||||||||||| |||||  |||||||||| ||||||||||    
T  16338071 tcagatcatggtacatctttgtagcccccaggtgaatactcaacctactcttatgactctcctcaagaatca 16338000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 28754788 - 28754959
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  28754788 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatcccttttcaaaccggaccaccaaaacagtttct 28754887  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  28754888 tcaaatcatggtacatttttgtagcccctgggtgaatactcaacctactcttgtgactctcctcaagaatca 28754959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 13320114 - 13320013
Alignment:
Q  71 atacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    ||||||||| || || || | ||| ||||||||| ||||||| || | |||||| ||||| || ||||| |||||||||||| | ||||||||||| |||    
T  13320114 atacacaaactgagcgacgtcacgcttcaaaccagaccaccaaaacagcttcttcaaatcatggtacattttcgtagctcccgggtgaatactcaatcta 13320015  T
Q  171 ct 172  Q
    ||    
T  13320014 ct 13320013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 31939379 - 31939520
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    |||||||| |||| ||| ||||| ||||||   || || | ||||||||| || || || | ||||||||||||  ||||||| || | ||| || | ||    
T  31939379 ttctgatgttcaaccttagacttttgacaagtcaaacatgcatacacaaaatgagcgacgtcacgtttcaaaccggaccaccaaaacagctttttcagat 31939478  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctac 171  Q
    | | ||||||||| ||||||||| ||||||||||||||||||    
T  31939479 cataatacatctttgtagctcccggatgaatactcaagctac 31939520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 17493100 - 17493248
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| || |||||||||   || || | ||||| |||||| || || | ||| ||||||||  ||||||| || | |||||    
T  17493100 gcaggcttctgatgttcaaccttagatttctgacaagtcaaacatgcatacaaaaattgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 17493199  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| |||||||||||   ||||||||| ||||||||    
T  17493200 tcaaatcatgatacattttcgtagctccagaatgaatacttaagctact 17493248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 18749232 - 18749291
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| ||  |||| |||||||||||||| |||||||||||||    
T  18749232 tcttcaaatcctgatacatcttagtcactcctagatgaatactcaaactacttctatgac 18749291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 8273967 - 8273913
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  8273967 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 8273913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 12792713 - 12792767
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  12792713 aaatcttgatacatcttagttgctcctggatgaatactcaaactacttctatgac 12792767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 13966908 - 13966854
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  13966908 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 13966854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 15610675 - 15610729
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  15610675 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 15610729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 16742271 - 16742217
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  16742271 aaatcttgatacatcttagttgctcctggatgaatactcaaactacttctatgac 16742217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 30138378 - 30138432
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  30138378 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 30138432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 30147929 - 30147983
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  30147929 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 30147983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 13317 - 13519
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||    
T  13317 catctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaactgtgccacatcacatttcaa 13416  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13417 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 13516  T
Q  201 ttc 203  Q
    |||    
T  13517 ttc 13519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18776520 - 18776722
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||||||  ||||||||    
T  18776520 catctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaagaatacacaaactgtgccacatctcgtttcaa 18776619  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18776620 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 18776719  T
Q  201 ttc 203  Q
    |||    
T  18776720 ttc 18776722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23574487 - 23574689
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  23574487 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaacaggaatacacaaactgtgccacatcacgtttcaa 23574586  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| || |||||||    
T  23574587 accagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaataaacattttc 23574686  T
Q  201 ttc 203  Q
    |||    
T  23574687 ttc 23574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 19770712 - 19770911
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  19770712 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 19770811  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19770812 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 19770911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 41771594 - 41771793
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  41771594 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 41771693  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41771694 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 41771793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 14999373 - 14999174
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  || ||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  14999373 tctaaaggtaccatcattccagcaggtttctgatgctcaactttagacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 14999274  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14999273 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 14999174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 16357254 - 16357453
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  16357254 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 16357353  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16357354 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 16357453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 27519159 - 27519358
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  27519159 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 27519258  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27519259 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27519358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 27685034 - 27684835
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  || ||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  27685034 tctaaaggtaccatcattccagcaggtttctgatgctcaattttagacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 27684935  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27684934 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 34567246 - 34567445
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  34567246 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 34567345  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34567346 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 34567445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23440960 - 23441162
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| || ||||||||||||||||| ||||  ||||||||    
T  23440960 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttatgacaaactaaacaagaatacacaaattgtgctacatcgcgtttcaa 23441059  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  23441060 tccagaccaccagaatatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcctcaagaatcattttc 23441159  T
Q  201 ttc 203  Q
    |||    
T  23441160 ttc 23441162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 27611104 - 27611305
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  27611104 catctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 27611203  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  27611204 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 27611303  T
Q  201 tt 202  Q
    ||    
T  27611304 tt 27611305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29475709 - 29475508
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||| ||||||||||  ||||||||    
T  29475709 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacatgaatacacaaactgtgccacatctcgtttcaa 29475610  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  29475609 accagaccaccaggaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 29475510  T
Q  201 tt 202  Q
    ||    
T  29475509 tt 29475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 40709532 - 40709731
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  40709532 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 40709631  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  40709632 cagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 40709731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 20800198 - 20800400
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  20800198 catctaaagataccatcataccagcaggtttctaatgtttaatcttcgacctctgacaaactaaacaggaatacacaaactgtgccacatcacgtttcaa 20800297  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||||    
T  20800298 tccagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaggttacttctatgactctcttcaagaatcattttc 20800397  T
Q  201 ttc 203  Q
    |||    
T  20800398 ttc 20800400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22332523 - 22332322
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  ||||| ||||| |||||||| |||||||||||||| ||||||||||  ||||||||    
T  22332523 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgatttctggcaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 22332424  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  22332423 accagaccaccagaaaatcttatttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 22332324  T
Q  201 tt 202  Q
    ||    
T  22332323 tt 22332322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 22349173 - 22349374
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| || |||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  22349173 catctaaaggtaccatcattccggcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 22349272  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||| |||    
T  22349273 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctactcccgtgactctcttcaagaatcatcttc 22349372  T
Q  201 tt 202  Q
    ||    
T  22349373 tt 22349374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 27668124 - 27667925
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  27668124 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 27668025  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  27668024 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagatcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27667925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 22135418 - 22135619
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||  |||| |||||| ||||||||||  |||||||||||||||||||| |||||||||||||| |||||||||   ||||||||    
T  22135418 catctaaaggtaccatcactccagtaggtttttgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacacctcgtttcaa 22135517  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||    
T  22135518 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttctagaatcatcttc 22135617  T
Q  201 tt 202  Q
    ||    
T  22135618 tt 22135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 37291130 - 37290937
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  ||| |||||||||| ||||| |||||||||||||| ||||||||||  ||||||||||    
T  37291130 tctaaaggtaccatcattccagcaggtttctgatgctcaactttctacttctgacagactaaacaggaatacacaaactgtgccacatctcgtttcaaac 37291031  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
     | ||||||||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37291030 tagaccaccagaaaatcttcttcaaatcatgatacatcttcgtggctcccggatgaatactcaagctacttctatgactctcttcaagaatcat 37290937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21881699 - 21881901
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||| ||||| ||||   |||||||    
T  21881699 catctaaagataccatcataccagcaggtttctgatgttcaatctttgacttctgacaaactaaacaggaatacacaaactgtgcgacatcgtgtttcaa 21881798  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||| | ||  ||||||||||||||||||| | | |||||||||||||||||||||||||||| ||||||||||||||||    
T  21881799 tccagaccaccagaatatcttcttcagattatgatacatcttcgtagctctcgggtgaatactcaagctacttctatgactctattcaagaatcattttc 21881898  T
Q  201 ttc 203  Q
    |||    
T  21881899 ttc 21881901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 26738363 - 26738161
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||  || |||||||||||||| ||||| |||| |||||||||    
T  26738363 catctaaagataccatcatcccagcaggtttctgatgctcaacttttgacttctgacaaatcaaacaggaatacacaaactgtgcaacatcacgtttcaa 26738264  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| | ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26738263 tccagaccaccaaaacaacttcttcagatcatgatacattttcgtagctccctgatgaatactcaagctacttctatgactctcttcaagaatcattttc 26738164  T
Q  201 ttc 203  Q
    |||    
T  26738163 ttc 26738161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 25423939 - 25424140
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||  || || ||||||||||| ||||| ||||  ||||||||    
T  25423939 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaactgtgcaacatcgcgtttcaa 25424038  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  25424039 tccagaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccggatgaatactcaa-ttacttctatgactctcttcaagaatcattttc 25424137  T
Q  201 ttc 203  Q
    |||    
T  25424138 ttc 25424140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21338933 - 21338731
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| || | |||||||||||||||||  |||||||| ||||||| ||| || |||||||| || |||||||||| |||||||||    
T  21338933 catctaaagataccatcatccccgtaggtttctgatgctcaactttcgacttttgacaaattaaacaagaatacacgaactgtgccacatcacgtttcaa 21338834  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||| | || | |||||| ||||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  21338833 cccagaccacgaaaacaacttcttcaaatcatgatacattttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 21338734  T
Q  201 ttc 203  Q
    |||    
T  21338733 ttc 21338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23517276 - 23517478
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||| |||||||||||||||| ||||| |||||||| | ||||||||  | ||||||    
T  23517276 catctaaagataccatcgtaccagcaggtttctgatgttcaatcttcaacttctgacaaactaaacaggattacacaaactatgccacatcgcatttcaa 23517375  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | |||||  |||||| ||||| | ||| |||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  23517376 tcaagaccactggaaaattttcttcagatcatgatacatcttcatagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 23517475  T
Q  201 ttc 203  Q
    |||    
T  23517476 ttc 23517478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 20467731 - 20467531
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    |||||||||  |||||  ||||||||||||| ||||||||  || ||||| | |||||  || || ||||| ||||| |||||||||| ||||||||| |    
T  20467731 tctaaagatgtcatcaacccagcaggtttctaatgctcaacttttgacttttaacaaatcaaacatgaatatacaaactgtgccacatcacgtttcaacc 20467632  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    |  ||||||| |  | |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||    
T  20467631 ccgaccaccaaaccaacttcttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctgttactctcttcaagaatcatcttctt 20467532  T
Q  203 c 203  Q
    |    
T  20467531 c 20467531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 23472002 - 23472181
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  |||||||||||||| |  || |||||||| || || | |||||||| ||||||||| ||| ||||||| || | |||||    
T  23472002 gcaggtttctgatgctcaactttcgacttctgacatatcaaacaggaatataccaactatgccacataacgtttcaacccagaccaccaaaacaacttct 23472101  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||| |  |||||||| |||||||||| ||||||||||||| | |||||||||||||||| ||||||    
T  23472102 tcaaatcatgatacatcgttctagctcccggatgaatacttaagctacttctataaatctcttcaagaatcatcttcttc 23472181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 21680391 - 21680246
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||| |||| ||| |||||||| |||   || || | |||||||||||| || |||| ||| |||||||||  |||||| || | ||| |    
T  21680391 gcaggtttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaattgagcaacatcacgcttcaaaccaggccaccaaaacagctttt 21680292  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||    
T  21680291 tcaaatcgtgatacatcttcgtagctcccggatggatactcaagct 21680246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 17268947 - 17268799
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||| |||| ||| |||||||| |||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  17268947 gcaggtttctgatggtcaaccttagacttctggcaagttaaacatgcatacacaaaatgagcgacatctcgcttcaacccagaccaccaaaacagctttt 17268848  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  17268847 tcaaatcatgatacatcttcgtagctcccggatgaatgctcaagctact 17268799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 37542994 - 37542815
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||| || |||| ||| ||||| || || ||||  | ||||| |||  ||||||| || |  ||||    
T  37542994 gcaggcttctgatgctcaaccttggacttctgacaaaccaaacaggcataaacaaactgagcaacatcccttttcataccggaccaccaaaacagtttct 37542895  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| || ||||| |||||||||||  | ||||||||||| |||||  | |||||||| |||||||||| |||||||    
T  37542894 tcaaatcatggtacattttcgtagctcctgggtgaatactcaacctactcttgtgactctcctcaagaatcaatttcttc 37542815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 24619902 - 24619760
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| |||||||| |||   ||||| | ||||||||| || || || | ||||||||||||  ||||||| || |  ||||| ||||    
T  24619902 ttctgatgctcaaccttagacttctggcaagtcaagcatgcatacacaaactgagcaacgtcacgtttcaaaccggaccaccaaaatagtttcttcaaat 24619803  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || ||||| |||||||||||| |||||||||||||||||||    
T  24619802 catggtacattttcgtagctcccggatgaatactcaagctact 24619760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 24716133 - 24715991
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| |||||||| |||   ||||| | ||||||||| || || || | ||||||||||||  ||||||| || |  ||||| ||||    
T  24716133 ttctgatgctcaaccttagacttctggcaagtcaagcatgcatacacaaactgagcaacgtcacgtttcaaaccggaccaccaaaatagtttcttcaaat 24716034  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || ||||| |||||||||||| |||||||||||||||||||    
T  24716033 catggtacattttcgtagctcccggatgaatactcaagctact 24715991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 24749161 - 24749019
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| |||||||| |||   ||||| | ||||||||| || || || | ||||||||||||  ||||||| || |  ||||| ||||    
T  24749161 ttctgatgctcaaccttagacttctggcaagtcaagcatgcatacacaaactgagcaacgtcacgtttcaaaccggaccaccaaaatagtttcttcaaat 24749062  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || ||||| |||||||||||| |||||||||||||||||||    
T  24749061 catggtacattttcgtagctcccggatgaatactcaagctact 24749019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 21407907 - 21408083
Alignment:
Q  20 accagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatc 119  Q
    |||| |||||||||| || ||||  || ||||||||||||| ||| || | ||||||||||||||||||||  || ||||| ||  ||||||| || |      
T  21407907 accaacaggtttctggtgttcaacttttgacttctgacaaattaaacacgcatacacaaattgtgccacatctcgcttcaacccggaccaccaaaataaa 21408006  T
Q  120 ttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    ||||| ||||| |||||||| || ||||||||   ||||||||||||  ||||||| ||||| | ||| ||||||||    
T  21408007 ttcttcaaatcatgatacatttttgtagctcctgcatgaatactcaaattacttctgtgactttgttctagaatcat 21408083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 14886604 - 14886433
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  14886604 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 14886505  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| || ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  14886504 tcaaatcatgatacatttttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 14886433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 23079702 - 23079531
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   ||||| | ||||||||| || || || |  |||||||||||  ||||||| || |  ||||    
T  23079702 gcaggcttctgatgttcaaccttagacttctgacaagtcaagcatgcatacacaaactgagctacgtcgcgtttcaaaccggaccaccaaaacagtttct 23079603  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||| | |||||||||||||||||||    
T  23079602 tcaaatcatggtacatttttgtagcccccgggtgaatactcaaactacttttgtgactctcttcaagaatca 23079531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 24798010 - 24797839
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  24798010 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 24797911  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||||||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  24797910 tcaaatcatggtacatttttgtagctcccgggtgaatactcaacctactcttgtgactctcctcaagaatca 24797839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 21496828 - 21496991
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| || |||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  21496828 gcaggcttttgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatttct 21496927  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | |  || ||||||||||| ||||||||  |||||||||| ||||||||||| ||||| |||||    
T  21496928 tcaggtcatgatacatctttgtagctcctggatgaatacttaagctacttctgtgactttcttc 21496991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 22235532 - 22235385
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    |||| |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||| ||||| | || | ||| ||    
T  22235532 caggcttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccagaccactaaaacagcttttt 22235433  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
     ||||| || |||||||| |||||||||||||||||||| ||||||||    
T  22235432 caaatcatggtacatctttgtagctcccagatgaatacttaagctact 22235385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 22503434 - 22503605
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||| |||||| | ||| ||||| || || ||||  | |||||||||  ||||| | || |  ||||    
T  22503434 gcaggcttctgatgctcaaccttggacttctgacaaattaagcaagcataaacaaactgagcaacatctcttttcaaaccggaccactaaaatagtttct 22503533  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||  | ||||||||||| |||||  |||||||||| ||||||||||    
T  22503534 tcaaatcatggtacattttagtagccccgggctgaatactcaacctactcttatgactctcctcaagaatca 22503605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 187
Target Start/End: Complemental strand, 21563535 - 21563423
Alignment:
Q  75 acaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttc 174  Q
    ||||| ||||| |||| ||||||||| ||  ||||||| || |  ||||| || || ||||||||||| ||||||||  |||||||||| ||||||||||    
T  21563535 acaaactgtgcaacatcacgtttcaatccggaccaccaaaacaatttcttcaagtcatgatacatctttgtagctcctggatgaatacttaagctacttc 21563436  T
Q  175 tatgactctcttc 187  Q
    | ||||| |||||    
T  21563435 tgtgactttcttc 21563423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 173
Target Start/End: Complemental strand, 21890371 - 21890223
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    |||| ||||||||||||| ||| ||||| ||||||    | || | ||| ||||| || || |||| | ||||||| ||| ||||||| || |  |||||    
T  21890371 caggcttctgatgctcaaccttagacttttgacaagtcgaacatgcataaacaaactgagcaacatcatgtttcaacccagaccaccaaaacaatttctt 21890272  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctactt 173  Q
     ||||| ||||||||||| ||||||||| |||||||||| |||||||||    
T  21890271 caaatcatgatacatctttgtagctcccggatgaatactaaagctactt 21890223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 25848830 - 25849001
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  25848830 gcaggcttctgatgctcaaccttggacttctgacaattcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacaatttct 25848929  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||  ||||||| || ||||||||||    
T  25848930 tcaaatcatggtacatttttgtagcccccgggtgaatactcaacctactcttatgactatcatcaagaatca 25849001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 25243866 - 25243822
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactca 165  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||    
T  25243866 tctttaaatcttgatacatcttcgtcgctcctagatgaatactca 25243822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 25308018 - 25307974
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactca 165  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||    
T  25308018 tctttaaatcttgatacatcttcgtcgctcctagatgaatactca 25307974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 20774586 - 20774657
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaag 167  Q
    ||||||||| ||||||| || | |||||| || || |||||||| || ||||||||||| ||||||||||||    
T  20774586 ttcaaaccagaccaccaaaacaacttcttcaagtcttgatacatttttgtagctcccaggtgaatactcaag 20774657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 22462779 - 22462850
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaag 167  Q
    ||||||||| ||||||| || | |||||| || || |||||||| || ||||||||| ||||||||||||||    
T  22462779 ttcaaaccagaccaccaaaacagcttcttcaagtcatgatacatttttgtagctcccggatgaatactcaag 22462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 23504294 - 23504353
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  23504294 tcttcaaatcttgatacatcttagtcgctcctggatgaatactcaaactacttctatgac 23504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 24582067 - 24582121
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  24582067 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 24582121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 20822290 - 20822371
Alignment:
Q  106 accaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    ||||||| || | |||||| || || |||||||| |||||||||||| |||||||||||||  ||||  ||||||| |||||    
T  20822290 accaccaaaacaacttcttcaagtcatgatacattttcgtagctcccggatgaatactcaaattactcttatgactttcttc 20822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 187
Target Start/End: Complemental strand, 21831323 - 21831211
Alignment:
Q  75 acaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttc 174  Q
    ||||| ||||| |||| ||| ||||| ||  ||||||| || |  ||||| || || ||||||||||| ||||||||| |||||||||| || ||||||     
T  21831323 acaaactgtgcaacatcacgcttcaatccggaccaccaaaacaatttcttcaagtcatgatacatctttgtagctcccggatgaatacttaaactacttt 21831224  T
Q  175 tatgactctcttc 187  Q
    | ||||| |||||    
T  21831223 tgtgactttcttc 21831211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 5e-92; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22040743 - 22040945
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  22040743 catctaaagataccatcataccagcagatttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaactgtgccacatcacgtttcaa 22040842  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22040843 tccagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcctagatgaatactcaagctacttctatgactctcttcaagaatcattttc 22040942  T
Q  201 ttc 203  Q
    |||    
T  22040943 ttc 22040945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 30313041 - 30312839
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| ||||||||||  | ||||||    
T  30313041 catctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatagacaaactgtgccacatctcttttcaa 30312942  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30312941 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 30312842  T
Q  201 ttc 203  Q
    |||    
T  30312841 ttc 30312839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22132938 - 22132736
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||||  ||||||||    
T  22132938 catctaaagataccatcataccagcaggtttctgatgctcaatctttgacttctgacaaactaagcaggaattcacaaactgtgccacatctcgtttcaa 22132839  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  22132838 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttcaatgactctcctcaagaatcattttc 22132739  T
Q  201 ttc 203  Q
    |||    
T  22132738 ttc 22132736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 32601028 - 32601230
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||  ||||||||    
T  32601028 catctaaagataccatcataccagcaggtttctgatgctcaatctttgacttctgacaaactaagcaggaatacacaaactttgccacatctcgtttcaa 32601127  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |    
T  32601128 accagaccaccagaaaatcttatttatatcgtgatacatcttcgtagctcccggatggatactcaagctacttctatgactctcttcaagaatcatttcc 32601227  T
Q  201 ttc 203  Q
    |||    
T  32601228 ttc 32601230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19978851 - 19979053
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||| |||||||||| |||||| ||    
T  19978851 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaactgtgccacatcacgttttaa 19978950  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19978951 tccagaccaccagaatatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 19979050  T
Q  201 ttc 203  Q
    |||    
T  19979051 ttc 19979053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 19113576 - 19113775
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  19113576 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 19113675  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19113676 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 19113775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 17673918 - 17673719
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  17673918 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 17673819  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17673818 cagaccaccagaaaatcttcttaaaatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 17673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15534264 - 15534468
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||| ||||||||  ||||||||    
T  15534264 catctagagataccatcataccagcaggtttctgatgctcaatctttgacttctgacaaactaaacaggaatacacgaattatgccacatctcgtttcaa 15534363  T
Q  101 accaaaccaccagaaaatcttctt---taaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcatt 197  Q
    |||| |||||||||||||||| ||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  15534364 accagaccaccagaaaatctttttttctaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatc 15534463  T
Q  198 ttctt 202  Q
    |||||    
T  15534464 ttctt 15534468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 19483959 - 19483760
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  19483959 tctaaaggtaccatcatcccagcgggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 19483860  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  19483859 cagaccaccagaaaatcttcttcaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 19483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 18857461 - 18857662
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||  |||||||| ||||||||||| ||||| |||||||| ||||||||||  ||||||||    
T  18857461 catctaaaggtaccatcattccagcaggtttctaatgctcaactttcgacttttgacaaactaaacaggagtacacaaactgtgccacatctcgtttcaa 18857560  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||    
T  18857561 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttctagaatcatcttc 18857660  T
Q  201 tt 202  Q
    ||    
T  18857661 tt 18857662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21166435 - 21166233
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||| |||| || |||||||||||||| ||||||||||  ||||||||    
T  21166435 catctaaagataccatcataccagcggatttctgatgttcaatcttcgacttctgataaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 21166336  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | |||||||||| |||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  21166335 tctagaccaccagaatatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 21166236  T
Q  201 ttc 203  Q
    |||    
T  21166235 ttc 21166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22128855 - 22128654
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||| | |||||||| |||||||||||||  || || |||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  22128855 catctaaaggtaccatccttccagcaggcttctgatgctcaacttttgatttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 22128756  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||    
T  22128755 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaaactacttctatgactctcttcaagaatcatcttc 22128656  T
Q  201 tt 202  Q
    ||    
T  22128655 tt 22128654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 16407941 - 16407744
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa- 101  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||| |||||| |||  |||||||||     
T  16407941 tctaacgataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaataggaatacacaaactgtgccgcatctcgtttcaaat 16407842  T
Q  102 ccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcatttt 199  Q
    ||| || |||||||||||||||||| ||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  16407841 ccagactaccagaaaatcttctttagatcatgatacatcttcgtagctcctgggtgaatactcaagctacttctatgactctcttcaagaatcatttt 16407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21921633 - 21921432
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||  || || ||||||||||| ||||| |||| |||||||||    
T  21921633 catctaaagataccatcataccagcaggtttctgatgctcaacctttgatttctgacaaatcaaacaagaatacacaaactgtgcaacatcacgtttcaa 21921534  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| |||||| |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  21921533 tccagaccaccaaaacaacttctttagatcgtggtacatcttcgtagctcccggatgaatactcaagttactcctatgactctcttcaagaatcattttc 21921434  T
Q  201 tt 202  Q
    ||    
T  21921433 tt 21921432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22120071 - 22119870
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||  ||||| |||||||||||||| ||||||||||| || ||||||||||   |||||||    
T  22120071 catctaaaggtaccatcattccaacaggtttctgatgctcaactttcgatttctgacaaactaaacaggaatacacgaactgtgccacatcttgtttcaa 22119972  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||| |||||||||||| |||    
T  22119971 accagaccactagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagcaacttctatgactctattcaagaatcatcttc 22119872  T
Q  201 tt 202  Q
    ||    
T  22119871 tt 22119870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 22988086 - 22988282
Alignment:
Q  7 aagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaa 106  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||  || |||||||||||||| ||||||| || ||||||||| ||| |    
T  22988086 aagataccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaatcaaacaggaatacacaaactgtgccatatcacgtttcaacccaga 22988185  T
Q  107 ccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||| || | |||||| | ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22988186 ccaccaaaacaacttcttcagatcatgatacattttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 22988282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23650925 - 23651127
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||   | || ||||||||||| ||||| |||| |||||||||    
T  23650925 catctaaagataccatcataccagcaagtttctgatgctcaactttcgacttctgacaaatccaacaagaatacacaaactgtgcaacatcacgtttcaa 23651024  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | ||| || | ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23651025 tccagaccaccaaaacaactttttcagatcatgatacatcttcgtagctcccagatgaatactcaagatacttctatgactctcttcaagaatcattttc 23651124  T
Q  201 ttc 203  Q
    |||    
T  23651125 ttc 23651127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21043329 - 21043531
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||| || || ||||||||||||||||| || |  | ||||||    
T  21043329 catctaaagacaccgtcataccagcaggtttctgatgctcaaccttcgatttctgacaaaccaaacaagaatacacaaattgtgcaacgtcgcatttcaa 21043428  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||| |||||||||||||||||||||    
T  21043429 tccggaccaccaaaacaacttctttaaatcatgatacatcttcgtagctctcggatgaatactcaagttacttctatggctctcttcaagaatcattttc 21043528  T
Q  201 ttc 203  Q
    |||    
T  21043529 ttc 21043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 22248291 - 22248112
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  |||||||| |||||||  || |||||||||||||| |||||||||| ||||||||| ||| ||||||| || | |||||    
T  22248291 gcaggtttctgatgctcaactttcgacttttgacaaatcaaacaggaatacacaaactgtgccacatcacgtttcaacccagaccaccaaaacaacttct 22248192  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22248191 tcaaatcatgatacatcctcgtagctcccggatgaatacacaagctacttctatgactctcttcaagaatcattttcttc 22248112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 12274586 - 12274445
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  12274586 catctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 12274487  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatctt 142  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  12274486 accagaccaccagaaaatcttctttaaatcatgatacatctt 12274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21393762 - 21393560
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||| ||||  || || | ||||||||| ||||| || |  ||||||||    
T  21393762 catctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaatcaaacaagcatacacaaactgtgcaacgtcgcgtttcaa 21393663  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| ||| ||| ||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||| |    
T  21393662 tccggaccaccaaaataacttctttagatcatgacacatcttcgtagctcctggatgaatactcaagttacttctatggctctcttcaagaatcatttcc 21393563  T
Q  201 ttc 203  Q
    |||    
T  21393562 ttc 21393560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21788256 - 21788054
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||| ||||  || || | ||||||||| ||||| || |  ||||||||    
T  21788256 catctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaatcaaacaagcatacacaaactgtgcaacgtcgcgtttcaa 21788157  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| ||| ||| ||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||| |    
T  21788156 tccggaccaccaaaataacttctttagatcatgacacatcttcgtagctcctggatgaatactcaagttacttctatggctctcttcaagaatcatttcc 21788057  T
Q  201 ttc 203  Q
    |||    
T  21788056 ttc 21788054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23949803 - 23950005
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||| |||||  |||||| ||||||||||||| |  || |||||||||||||  || || ||||| ||||| |||||||||| || ||||||    
T  23949803 catctaaagatatcatcaacccagcaagtttctgatgctcgacttttgacttctgacaaatcaaacatgaatatacaaactgtgccacatcacttttcaa 23949902  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||| | |||    
T  23949903 cccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttatgtgactctcttcaagaatcgtcttc 23950002  T
Q  201 ttc 203  Q
    |||    
T  23950003 ttc 23950005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 22377328 - 22377149
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||   | || || |||||||  || |||||||||||||| ||||||||||   ||||||| ||| ||||||| || | |||||    
T  22377328 gcaggtttctgatgctcaactattgatttatgacaaatcaaacaggaatacacaaactgtgccacatcgtgtttcaatccagaccaccaaaacaacttct 22377229  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22377228 tcaaatcatgatacatctttgtagctcccggatgaatactcaagctatttctatgactctcttcaagaatcattttcttc 22377149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 22383503 - 22383324
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||   | || || |||||||  || |||||||||||||| ||||||||||   ||||||| ||| ||||||| || | |||||    
T  22383503 gcaggtttctgatgctcaactattgatttatgacaaatcaaacaggaatacacaaactgtgccacatcgtgtttcaatccagaccaccaaaacaacttct 22383404  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22383403 tcaaatcatgatacatctttgtagctcccggatgaatactcaagctatttctatgactctcttcaagaatcattttcttc 22383324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21251825 - 21252030
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||  || || ||||| ||||| ||||  || |  ||||||||    
T  21251825 catctaacgataccatcacaccagcaggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatatacaaactgtgtaacgtcgcgtttcaa 21251924  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatct---tcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcatt 197  Q
     ||  ||||||| || | |||||||| ||| ||||||||||   ||||||||||| |||||||||||| | ||||||| || ||||||||||||||||||    
T  21251925 tccggaccaccaaaacaacttctttagatcatgatacatcttcgtcgtagctcccggatgaatactcaggttacttctgtggctctcttcaagaatcatt 21252024  T
Q  198 ttcttc 203  Q
    ||||||    
T  21252025 ttcttc 21252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 202
Target Start/End: Complemental strand, 20396002 - 20395828
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    ||||||||||||||||||||||       ||| |||||||  || || ||||| ||||| |||||||||| ||||||||| ||| ||||||| || |  |    
T  20396002 ccagcaggtttctgatgctcaa-------cttttgacaaatcaaacatgaataaacaaactgtgccacatcacgtttcaacccagaccaccaaaacaatt 20395910  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    |||| ||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  20395909 tcttcaaatcatgatacatctttgtagctcccggatgaatactcaagctacttctgtgactttcttcaagaatcatcttctt 20395828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22164089 - 22164012
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaa 78  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22164089 catctaaagataccatcataccagcagatttctgatgctcaatctttgacttctgacaaactaagcaggaatacacaa 22164012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 31416348 - 31416200
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||| ||||| || || |||| ||| ||||||||  ||||||| || | |||||    
T  31416348 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcatgcataaacaaaatgagcaacatcacgcttcaaaccggaccaccaaaacagcttct 31416249  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||| ||||||||| |||||||||||||||||||    
T  31416248 tcaaatcatggtacatctttgtagctcccggatgaatactcaagctact 31416200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 23655834 - 23655982
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || || | ||||||||| ||| ||||||| || | |||||    
T  23655834 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacgtcacgtttcaacccagaccaccaaaacagcttct 23655933  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||| ||||||||| |||||||||| ||||||||    
T  23655934 tcaaatcatgatacatctttgtagctcccggatgaatacttaagctact 23655982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 14566049 - 14566220
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||| ||| |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  14566049 gcaggcttctgatgctcaaccttggacttctgacaaattaaacaggcataaacaaactgagcaacatcccttttcaaaccggaccaccaaaacagtttct 14566148  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| || ||||| ||  | ||||||||||| |||||| | |||||||| ||||||||||    
T  14566149 tcaaatcatgatacatttttgtagcccctgggtgaatactcaacctacttttgtgactctcctcaagaatca 14566220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 16271098 - 16270927
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || | |||||    
T  16271098 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagcttct 16270999  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  16270998 tcaaatcatggtacatctttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 16270927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 19852324 - 19852481
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| ||||||||||||  ||| || | ||| | ||| || || |||| ||||||||||||  ||||||| || |  ||||| || |    
T  19852324 ttctgatgctcaaccttagacttctgacaagttaaacatgcataaaaaaactgagcaacatcacgtttcaaaccggaccaccaaaacaatttcttcaagt 19852423  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | ||||||||||| ||||||||  |||||||||| ||||||||||| ||||| |||||    
T  19852424 catgatacatctttgtagctcctggatgaatacttaagctacttctgtgactttcttc 19852481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 19858360 - 19858517
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| ||||||||||||  ||| || | ||| | ||| || || |||| ||||||||||||  ||||||| || |  ||||| || |    
T  19858360 ttctgatgctcaaccttagacttctgacaagttaaacatgcataaaaaaactgagcaacatcacgtttcaaaccggaccaccaaaacaatttcttcaagt 19858459  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | ||||||||||| ||||||||  |||||||||| ||||||||||| ||||| |||||    
T  19858460 catgatacatctttgtagctcctggatgaatacttaagctacttctgtgactttcttc 19858517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 31570716 - 31570559
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  31570716 gcaggtttctggtgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 31570617  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  31570616 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 31570559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 27355455 - 27355626
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  27355455 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 27355554  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| ||||||||||| ||||| ||| | || |||||||| |||||  | ||||| |||||||||||||    
T  27355555 tcaaatcatgatacatctttgtagcccccgggtgtatactcaatctactcttgtgactatcttcaagaatca 27355626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 195
Target Start/End: Original strand, 6604571 - 6604736
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||| ||||    
T  6604571 ttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacaatttcttcaaat 6604670  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | |||||||| || |||||| || | ||||||||||| |||||  | |||||||| ||||||||||    
T  6604671 catgatacatttttgtagcttccgggtgaatactcaacctactcttgtgactctcctcaagaatca 6604736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 195
Target Start/End: Original strand, 6680024 - 6680189
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||| ||||    
T  6680024 ttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacaatttcttcaaat 6680123  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | |||||||| || |||||| || | ||||||||||| |||||  | |||||||| ||||||||||    
T  6680124 catgatacatttttgtagcttccgggtgaatactcaacctactcttgtgactctcctcaagaatca 6680189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 20009793 - 20009631
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| |||||||||||  | |||||| || |  ||||    
T  20009793 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaaacgga-ccaccaaaataatttct 20009695  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | ||||| |||||||| || ||||||||  |||||||||| ||||||||||| ||||| |||||    
T  20009694 tcaaatcatgatacatatttgtagctcctggatgaatacttaagctacttctgtgactttcttc 20009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 1267145 - 1267293
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||  ||   || || | ||||||||| || || || | ||||||||||||  ||||||| || | ||| |    
T  1267145 gcaggcttctgatgctcaaccttagacttctggaaagtcaaacatgcatacacaaaatgggcaacgtcacgtttcaaaccggaccaccaaaacagctttt 1267244  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||| ||||||||  |||||||||||||||||||    
T  1267245 tcaaatcatggtacatctttgtagctcctggatgaatactcaagctact 1267293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 21841387 - 21841487
Alignment:
Q  87 acattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctctt 186  Q
    |||| ||||||||| ||| ||||||| || |  ||||| || || ||||||||||| ||||||||  |||||||||| ||||||||||| ||||| ||||    
T  21841387 acatcacgtttcaacccagaccaccaaaacaatttcttcaagtcatgatacatctttgtagctcctggatgaatacttaagctacttctgtgactttctt 21841486  T
Q  187 c 187  Q
    |    
T  21841487 c 21841487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 803547 - 803376
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||| || |||| ||| || || |  || ||||  | |||||||||| ||||||| || |  ||||    
T  803547 gcaggcttctgatgctcaaccttggacttctgacaaaccaaacaggcataaacgaacttagcaacatctcttttcaaaccagaccaccaaaacagtttct 803448  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||  | ||||||||||| |||||  | |||||||| || |||||||    
T  803447 tcaaatcatggtacatctttgtagcccctgggtgaatactcaacctactcttgtgactctcctctagaatca 803376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 22316195 - 22316254
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| |||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  22316195 tcttcaaatcctgatacatcttcgttgctcctggatgaatactcaaactacttctatgac 22316254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 22371955 - 22372010
Alignment:
Q  132 tgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||| ||||| |||||    
T  22371955 tgatacatctttgtagctcccaggtgaatacttaagctacttctgtgactttcttc 22372010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 12305665 - 12305834
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||||||||  || || | ||| | ||| || || |||| ||  ||||||||  ||||||| || |  ||||    
T  12305665 gcaggcttctgatgatcaaccttagacttctgacaaataaaacaagcataaaaaaactgagcaacatcacaattcaaaccggaccaccaaaacagtttct 12305764  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaat 193  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||  |||||||||||||||||||    
T  12305765 tcaaatcatggtacattttagtagcccccgggtgaatactcaacctactcttatgactctcttcaagaat 12305834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 22051833 - 22051918
Alignment:
Q  87 acattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    |||| ||| ||||||||  ||||||| || | ||| || ||||| || |||||||||||||||||| ||||||||||||| |||||    
T  22051833 acatcacgcttcaaaccggaccaccaaaacagctttttcaaatcatggtacatcttcgtagctcccggatgaatactcaacctact 22051918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 20652204 - 20652152
Alignment:
Q  27 ggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaa 79  Q
    ||||||||||| |||| |||||||||||||||||| ||||| | |||||||||    
T  20652204 ggtttctgatgttcaatcttcgacttctgacaaaccaagcaagcatacacaaa 20652152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 20975453 - 20975377
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||  ||||||| || | |||| | ||||| |||||||| ||||||||||||  ||||||||||||||||||    
T  20975453 ttcaaaccggaccaccaaaacagcttcctcaaatcatgatacattttcgtagctcccgtatgaatactcaagctact 20975377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 29303253 - 29303121
Alignment:
Q  71 atacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    ||||||||| || || ||||  |||||||||||  ||||||| || |  | ||| ||||| ||||||||||| ||||| ||| | ||||| ||||| |||    
T  29303253 atacacaaactgagcaacatctcgtttcaaaccggaccaccaaaacagttccttcaaatcatgatacatctttgtagcccccgggtgaatgctcaaccta 29303154  T
Q  171 cttctatgactctcttcaagaatcattttcttc 203  Q
    ||  | ||||||||| ||||||||| |||||||    
T  29303153 ctcttgtgactctctacaagaatcaatttcttc 29303121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 21196279 - 21196220
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  21196279 tcttcaaatcctgatacatcttagtcgctcctggatgaatactcaaactacttctatgac 21196220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 16876867 - 16876813
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  16876867 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 16876813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 21850109 - 21850055
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  21850109 aaatcttgatacatcttagttgctcctggatgaatactcaaactacttctatgac 21850055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 22623636 - 22623566
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    ||||| |||||||| || ||||||||| |||||||||||||  ||||||| ||||| | ||| ||||||||    
T  22623636 aaatcatgatacatttttgtagctcccggatgaatactcaaattacttctgtgacttttttccagaatcat 22623566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 25283132 - 25283185
Alignment:
Q  119 cttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    |||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||    
T  25283132 cttcttcaaatcctgatacatcttcgtcgctcctagatgaatacttaaactact 25283185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 9596864 - 9597066
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  9596864 catctaaagataccatcataccagcaggtttctaatgctcaatcttcgacttctgacaaactaaacaggaatacacaaattgtgccacatcacgtttcaa 9596963  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  9596964 accagaccaccataaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 9597063  T
Q  201 ttc 203  Q
    |||    
T  9597064 ttc 9597066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16779 - 16579
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  16779 catctaaagataccattataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 16680  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16679 accagaccaccagaaaatcttctttaaatcgtgataca--ttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 16582  T
Q  201 ttc 203  Q
    |||    
T  16581 ttc 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 13686873 - 13687072
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  13686873 tctaaaggtaccatcattccagcaggtttctgatgctcaactttagacttctgacaaactaagcaggaatacacaaactgtgccacatctcgtttcaaac 13686972  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13686973 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttctt 13687072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 10871802 - 10872003
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  10871802 catctaaaggtaccatcatcccagcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaattgtgccacatctcgtttcaa 10871901  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  10871902 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 10872001  T
Q  201 tt 202  Q
    ||    
T  10872002 tt 10872003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 8708414 - 8708613
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||||    
T  8708414 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaataaacaaactgtgccacatctcgtttcaaac 8708513  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8708514 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 8708613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 18551219 - 18551020
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  18551219 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 18551120  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||    
T  18551119 cagaccaccagaaaatcttctttaaattatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaattatcttctt 18551020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 11236676 - 11236475
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  ||||| |||||||||||||| || ||||||||||| ||||||||||  ||||||||    
T  11236676 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgatttctgacaaactaaacaagaatacacaaactgtgccacatctcgtttcaa 11236577  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  11236576 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 11236477  T
Q  201 tt 202  Q
    ||    
T  11236476 tt 11236475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 44790814 - 44790613
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||| ||||  ||||||||    
T  44790814 catctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgctacatctcgtttcaa 44790715  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  44790714 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 44790615  T
Q  201 tt 202  Q
    ||    
T  44790614 tt 44790613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 18178554 - 18178750
Alignment:
Q  6 aaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaa 105  Q
    |||| ||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||     
T  18178554 aaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaagcaggaatacacaaattgtgccacatctcgtttcaaaccag 18178653  T
Q  106 accaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| |||||    
T  18178654 accaccagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactttcttcaagaatcatcttctt 18178750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 8199437 - 8199636
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  8199437 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 8199536  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8199537 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 8199636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 14333206 - 14333404
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  14333206 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 14333305  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14333306 cagaccacaagaaa-tcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 14333404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 15160518 - 15160319
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  15160518 tctaaaggtaccatcattccagcaggtttctgatgctcaactttagacttctgacaaactaagcaggaatacacaaactgtgccacatctcgtttcaaac 15160419  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||  |||| |||||||||||||||||||||||||||||    
T  15160418 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactaaatatactcctatgactctcttcaagaatcattttctt 15160319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 11552565 - 11552364
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||| ||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  11552565 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttatgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 11552466  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    ||||  ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||| ||||||||||| |||    
T  11552465 accaggccaccagaaaatcttctttcaatcatgatacatcttcgtagctcccggatgaatactcaagctactcctgtgactctcctcaagaatcatcttc 11552366  T
Q  201 tt 202  Q
    ||    
T  11552365 tt 11552364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 12688308 - 12688509
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||  || ||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  12688308 catctaaaggtaccatcactccggcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 12688407  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    || |  |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||    
T  12688408 actaggccaccaaaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctactcctgtgactctcttcaagaatcatcttc 12688507  T
Q  201 tt 202  Q
    ||    
T  12688508 tt 12688509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 23203076 - 23202875
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| ||||||||||| |  |  ||||| |||||||||||||| |||||||||||||| || |||||||  ||||||||    
T  23203076 catctaaaggtaccatcatcccagcgggtttctgatgtttgactttcgatttctgacaaactaaacaggaatacacaaactgcgccacatctcgtttcaa 23202977  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  23202976 accagaccactagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 23202877  T
Q  201 tt 202  Q
    ||    
T  23202876 tt 23202875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 23509203 - 23509002
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| ||||||||||| |  |  ||||| |||||||||||||| |||||||||||||| || |||||||  ||||||||    
T  23509203 catctaaaggtaccatcatcccagcgggtttctgatgtttgactttcgatttctgacaaactaaacaggaatacacaaactgcgccacatctcgtttcaa 23509104  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  23509103 accagaccactagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 23509004  T
Q  201 tt 202  Q
    ||    
T  23509003 tt 23509002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 14955365 - 14955562
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| |  |||||||||||||||||||| ||||||| |||||| ||||||||||   |||||||    
T  14955365 catctaaaggtaccatcattccggcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaattcacaaactgtgccacatcttgtttcaa 14955464  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    ||||  |||||||||||||||||||||||| |||||||||||||||||||    |||||||||||||||||| || |||||||||||||||||||| |||    
T  14955465 accaggccaccagaaaatcttctttaaatcatgatacatcttcgtagctc----atgaatactcaagctactcctgtgactctcttcaagaatcatcttc 14955560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 14040506 - 14040704
Alignment:
Q  5 taaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaacca 104  Q
    ||||||||||||||| |||| |||||||| ||| ||||  ||||||||||||||||  || |||||||||||||| |||||||||| ||||||||| |||    
T  14040506 taaagataccatcatcccagaaggtttctaatgatcaactttcgacttctgacaaatcaaacaggaatacacaaactgtgccacatcacgtttcaaccca 14040605  T
Q  105 aaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
     ||||||| || | ||| || ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  14040606 gaccaccaaaacaactttttcaaatcatgatacatcttcgtagctcccggatgaatactcaaactacttctatgactctcttcaagattcattttcttc 14040704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 14350536 - 14350734
Alignment:
Q  5 taaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaacca 104  Q
    ||||||||||||||| |||| |||||||| ||| ||||  ||||||||||||||||  || |||||||||||||| |||||||||| ||||||||| |||    
T  14350536 taaagataccatcatcccagaaggtttctaatgatcaactttcgacttctgacaaatcaaacaggaatacacaaactgtgccacatcacgtttcaaccca 14350635  T
Q  105 aaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
     ||||||| || | ||| || ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  14350636 gaccaccaaaacaactttttcaaatcatgatacatcttcgtagctcccggatgaatactcaaactacttctatgactctcttcaagattcattttcttc 14350734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15154120 - 15153918
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||  || || ||||||||||| ||||| |||| |||||||||    
T  15154120 catctaaagataccatcataccagcagatttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaactgtgcaacatcacgtttcaa 15154021  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || |  ||||| | ||| |||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||    
T  15154020 tccagaccaccaaaacaaattcttcagatcatgatacatcttcatagctcccggatggatactcaagctactcctatgactctcttcaagaatcattttc 15153921  T
Q  201 ttc 203  Q
    |||    
T  15153920 ttc 15153918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 11771681 - 11771502
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||| ||||||||  ||||||||||||||||  || |||||||||||||| |||||||||| ||||||||| ||| ||||||| || | |||||    
T  11771681 gcaggtttctaatgctcaactttcgacttctgacaaatcaaacaggaatacacaaactgtgccacatcacgtttcaatccagaccaccaaaacaacttct 11771582  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11771581 tcaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttcttc 11771502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 321500 - 321298
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||  |||| |||||  |||||||||  ||||| ||    
T  321500 catctaaagatgtcatcataccagcaggtttctgatgctcaaccttcgacttttgacaaattaaacaaaaatatacaaaccgtgccacatcgcgttttaa 321401  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| ||||| ||||||||||||||||||||  |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  321400 tccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcctggatggatactcaagctacttctatcactttcttcaagaatcattttc 321301  T
Q  201 ttc 203  Q
    |||    
T  321300 ttc 321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15204426 - 15204627
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||  ||||||||||||||||||||||  || |||||||||||||  || || ||||| ||||| |||||||||| |||||||||    
T  15204426 catctaaggataccatcaacccagcaggtttctgatgctcaacttttgacttctgacaaatcaaacatgaatatacaaactgtgccacatcacgtttcaa 15204525  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | ||||||| || | |||||| ||||| |||||||||||||||||| || |||||||||||||||||||| | |||||||||||||||||||| |||    
T  15204526 cctagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagcttccggatgaatactcaagctacttttgtgactctcttcaagaatcatcttc 15204625  T
Q  201 tt 202  Q
    ||    
T  15204626 tt 15204627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 15625379 - 15625561
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||||||||||||||| |  || |||||||||||||  || || ||||||||||| ||||||||||||| |||||| ||| ||||||| || | ||    
T  15625379 ccagcaggtttctgatgctctacttttgacttctgacaaatcaaacatgaatacacaaactgtgccacattacatttcaacccagaccaccaaaacaact 15625478  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||| ||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  15625479 tcttcaaatcatgatacatctttgtagctcccggatgaatactcaagctacttctgtgactttcttcaagaatcatcttcttc 15625561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 14212574 - 14212683
Alignment:
Q  94 gtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaat 193  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  14212574 gtttcaaaccagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatggatactcaagctacttcgatgactctcttcaagaat 14212673  T
Q  194 cattttcttc 203  Q
    ||||||||||    
T  14212674 cattttcttc 14212683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 19613506 - 19613651
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   || || | |||||||||||| || |||| ||| ||||||||| ||||||| || | ||| |    
T  19613506 gcaggcttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaattgagcaacatcacgcttcaaaccagaccaccaaaacagctttt 19613605  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||    
T  19613606 tcaaatcgtgatacatcttcgtagctcccggatggatactcaagct 19613651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 21662792 - 21662933
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    ||||||||||||| ||||  |||||||| ||||||| ||| || | ||||||||||||||||||||  || ||||| ||  ||||||| || | ||||||    
T  21662792 caggtttctgatgttcaactttcgacttttgacaaattaaacacgcatacacaaattgtgccacatctcgcttcaacccggaccaccaaaacaacttctt 21662891  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaa 166  Q
     ||||| ||||| || || ||||||||| |||||||||||||    
T  21662892 caaatcatgatatatttttgtagctcccggatgaatactcaa 21662933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 23505288 - 23505131
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||| |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  23505288 gcaggtttctgatgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 23505189  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  23505188 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 23505131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 825 - 677
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||| |||||||| || |||| ||| ||||||||  ||||||| || |  ||||    
T  825 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcacgcataaacaaattgagcaacatcacgcttcaaaccggaccaccaaaacagtttct 726  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||| || |||||| |||||||||||||||||||    
T  725 tcaaatcatggtacatctttgttgctcccggatgaatactcaagctact 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 13666368 - 13666516
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||||||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  13666368 gcaggcttctgatgttcaaccttcgacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 13666467  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| |||||||||||| |||||||||| ||||||||    
T  13666468 tcaaatcatgatacattttcgtagctcccggatgaatacttaagctact 13666516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 15341262 - 15341410
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| ||||  || ||||||||||||   || || | ||||||||| || || || | ||||||||||||  ||||||| || | |||||    
T  15341262 gcaggcttctgatgttcaactttagacttctgacaagtcaaacatgcatacacaaactgagctacgtcacgtttcaaaccggaccaccaaaacagcttct 15341361  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||||    
T  15341362 tcaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 15341410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 18053371 - 18053214
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  18053371 gcaggtttctggtgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 18053272  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  18053271 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 18053214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 14130704 - 14130852
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   ||||| | ||| ||||| || || |||| ||| |||||| |  ||||||| || | ||| |    
T  14130704 gcaggcttctgatgttcaaccttagacttctggcaagtcaagcatgcatatacaaaatgagcgacatcacgcttcaaaacggaccaccaaaacagctttt 14130803  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||||    
T  14130804 tcaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 14130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 14434522 - 14434670
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   ||||| | ||| ||||| || || |||| ||| |||||| |  ||||||| || | ||| |    
T  14434522 gcaggcttctgatgttcaaccttagacttctggcaagtcaagcatgcatatacaaaatgagcgacatcacgcttcaaaacggaccaccaaaacagctttt 14434621  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||||    
T  14434622 tcaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 14434670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 16949889 - 16949742
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||||||||| || || |||| ||| || |||||  ||||||| || |  ||||    
T  16949889 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcatgcatacacaaaatgagcaacatcacgcttgaaaccggaccaccaaaacagtttct 16949790  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
      |||||||| |||||||| ||||||||| | |||||||||||||||||    
T  16949789 c-aaatcgtggtacatctttgtagctcccgggtgaatactcaagctact 16949742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 4440855 - 4440914
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||||||||| |||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  4440855 tctttaaatcctgatacatcttcgtcgctcctggatgaatactcaaactacttctatgac 4440914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 8211546 - 8211375
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  8211546 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacaatttct 8211447  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    ||||||| || ||||| || ||||| ||| | ||||||||||| |||||  | |||||||| || |||||||    
T  8211446 ttaaatcatggtacatttttgtagcccccgggtgaatactcaacctactcttgtgactctcctccagaatca 8211375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 19148042 - 19148205
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  19148042 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatttct 19148141  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | || || ||||||||||| ||||||||  |||||||||| |||||| || | ||||| |||||    
T  19148142 tcaagtcatgatacatctttgtagctcctggatgaatacttaagctatttatgtgactttcttc 19148205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 20747441 - 20747604
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  20747441 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatttct 20747540  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | || || ||||||||||| ||||||||  |||||||||| |||||| || | ||||| |||||    
T  20747541 tcaagtcatgatacatctttgtagctcctggatgaatacttaagctatttatgtgactttcttc 20747604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 14263662 - 14263505
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || | |||||    
T  14263662 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacacgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaacttct 14263563  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | || || ||||||||||| |||| |||  |||||||||| | |||| |||| |||||    
T  14263562 tcaagtcatgatacatctttgtagttcctggatgaatacttaggctatttctgtgact 14263505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 12456533 - 12456681
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||||||||| || || || | |||||||||||   ||||||| || | |||||    
T  12456533 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcatgcatacacaaaatgagctacgtcacgtttcaaactggaccaccaaaacagcttct 12456632  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||    
T  12456633 tcaaatcatggtacatttttgtagcccccgggtgaatactcaaactact 12456681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 11305681 - 11305510
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | ||||||| |  ||||||| || |  ||||    
T  11305681 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatcccttttcaaatcggaccaccaaaacagtttct 11305582  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| || ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  11305581 tcaaatcatgatacatttttgtagcccctgggtgaatactcaaactactcttgtgactctcctcaagaatca 11305510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 13354077 - 13354136
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| |||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  13354077 tcttcaaatcctgatacatcttcgttgctcctggatgaatactcaaactacttctatgac 13354136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 13968086 - 13967915
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  13968086 gcaggcttctgatgctcaacctttgacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 13967987  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||  | |||||||| || |||||||    
T  13967986 tcaaatcatggtacatttttgtagcccccgggtgaatactcaacctactcttgtgactctcctcgagaatca 13967915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 14937274 - 14937333
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| | |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  14937274 tcttcaaatcctaatacatcttcgtcgctcctagatgaatactcaaactacttctatgac 14937333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 15364867 - 15364926
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| | |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  15364867 tcttcaaatcctaatacatcttcgtcgctcctagatgaatactcaaactacttctatgac 15364926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 12206221 - 12206055
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||| |||||||| ||||  || || |||||||||   || || | ||| ||||| ||||| |||| ||| ||||||||  ||||||| || |  |    
T  12206221 ccagcaggcttctgatgttcaactttagatttctgacaagtcaaacatgcatatacaaactgtgcaacatcacgcttcaaaccggaccaccaaaacaatt 12206122  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    |||| || || ||| |||||||  |||||||| |||||||||| ||||||||||| ||||| |||||    
T  12206121 tcttcaagtcatgaaacatctttatagctcccggatgaatacttaagctacttctgtgactttcttc 12206055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 14285726 - 14285646
Alignment:
Q  92 acgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||||||  ||||||| || | |||||| ||||| || ||||| || ||||||||  |||||||||||||||||||    
T  14285726 acgtttcaaaccggaccaccaaaacagcttcttcaaatcatggtacatttttgtagctccaggatgaatactcaagctact 14285646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 13022284 - 13022359
Alignment:
Q  120 ttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    ||||| ||||| || |||||||| ||||| ||| | ||||||||||| |||||  | |||||||||||||||||||    
T  13022284 ttcttcaaatcatggtacatctttgtagcccccgggtgaatactcaacctactcttgtgactctcttcaagaatca 13022359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 16071649 - 16071558
Alignment:
Q  87 acattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatg 178  Q
    |||| ||||||||| | | ||||||| || |  ||||| ||||| || || ||||| ||||||||| |||||||||| ||||||||||||||    
T  16071649 acatcacgtttcaacctagaccaccaaaataatttcttcaaatcatggtatatctttgtagctcccggatgaatacttaagctacttctatg 16071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 49153132 - 49153303
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| || ||||||||||  || |||| ||| ||||| || || ||||    |||||||||  ||||||| || |  ||||    
T  49153132 gcaggcttctgatgctcaaccttggatttctgacaaatcaaacaggcataaacaaactgagcaacatcttttttcaaaccggaccaccaaaacagtttct 49153231  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| || ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  49153232 tcaaatcatgatacatttttgtagcccctgggtgaatactcaacctactcttgtgactctcctcaagaatca 49153303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 13455674 - 13455732
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatga 179  Q
    |||| ||||| | |||||||||||| |||||  ||||||||||||| ||||||||||||    
T  13455674 tcttcaaatcctaatacatcttcgtcgctcctggatgaatactcaaactacttctatga 13455732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 27107112 - 27107058
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  27107112 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 27107058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 13455580 - 13455620
Alignment:
Q  27 ggtttctgatgctcaagcttcgacttctgacaaactaagca 67  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  13455580 ggtttctgatgttcaaccttcgacttctgacaaaccaagca 13455620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18226640 - 18226438
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  18226640 catctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 18226541  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18226540 accagaccaccagaaaatcttctttaaattgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 18226441  T
Q  201 ttc 203  Q
    |||    
T  18226440 ttc 18226438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 8387232 - 8387431
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  8387232 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 8387331  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8387332 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 8387431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 14303172 - 14302971
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  14303172 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 14303073  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  14303072 accagaccaccagaaaatcttcttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 14302973  T
Q  201 tt 202  Q
    ||    
T  14302972 tt 14302971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 8052815 - 8052616
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  8052815 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 8052716  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  8052715 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgaatctcttcaagaatcatcttctt 8052616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 12477420 - 12477619
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  12477420 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 12477519  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12477520 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 12477619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 23956567 - 23956766
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  23956567 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 23956666  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23956667 cagaccaccagaaaatcttctttaaatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 23956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 29038596 - 29038397
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  29038596 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 29038497  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29038496 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 29038397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 40473858 - 40474059
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  40473858 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 40473957  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  40473958 accagaccaccagaaaatcttctttaaatcatgatacatcttcatagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 40474057  T
Q  201 tt 202  Q
    ||    
T  40474058 tt 40474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 19777985 - 19777786
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  19777985 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 19777886  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19777885 cagaccaccagaaaatcttcttaaaatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 19777786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 27712156 - 27712355
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| | || |||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  27712156 tctaaaggtaccatcatcctagtaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 27712255  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27712256 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27712355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 14681385 - 14681586
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  14681385 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 14681484  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    ||||  |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||    
T  14681485 accaggccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctactcctatgactctcttcaagaatcatcttc 14681584  T
Q  201 tt 202  Q
    ||    
T  14681585 tt 14681586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 18298025 - 18298224
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  ||||||||| |||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  18298025 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttccgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 18298124  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18298125 cagaccaccagaaaatcttctttaaatcgtgatacatctttgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 18298224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 12524494 - 12524689
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||| | ||||||||||||||||||||||  ||||||||||||||||| || ||||||||||||||  |||||||||  ||||||||    
T  12524494 catctaaaggtaccatctttccagcaggtttctgatgctcaactttcgacttctgacaaaccaaacaggaatacacaaaccgtgccacatctcgtttcaa 12524593  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||||||||||||||||    
T  12524594 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagcttccggatggatactcaagctacttctgtgactctcttcaagaatcat 12524689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15147079 - 15146877
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||  ||||||||||||| ||||||||||  | ||||||    
T  15147079 catctaaagataccatcatactagcaggtttctgatgttcaatcttcgacttctgacaaaccaaataggaatacacaaactgtgccacatcgcatttcaa 15146980  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| || ||||||| |||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15146979 tccagacgaccagaatatcttcttcagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 15146880  T
Q  201 ttc 203  Q
    |||    
T  15146879 ttc 15146877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16354639 - 16354437
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||  ||||||||||||| ||||||||||  ||||||||    
T  16354639 catctaacgataccatcatacaagcaggtttctgatgttcaatcttcgacttgtgacaaactaaataggaatacacaaactgtgccacatctcgtttcaa 16354540  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||||||| |||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  16354539 tccagaccaccagaaaatcatcttcagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaattattttc 16354440  T
Q  201 ttc 203  Q
    |||    
T  16354439 ttc 16354437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 203
Target Start/End: Original strand, 14160289 - 14160490
Alignment:
Q  2 atctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa 101  Q
    ||||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||     
T  14160289 atctaaagacaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatcacgtttcaat 14160388  T
Q  102 ccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttct 201  Q
    ||| ||||||| || | |||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| | ||| ||||||||||||||||| ||||    
T  14160389 ccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcccggatggatactcaagctactccgatggctctcttcaagaatcatcttct 14160488  T
Q  202 tc 203  Q
    ||    
T  14160489 tc 14160490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 14850537 - 14850358
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  ||||||||||||||||  || |||||||||||||| ||||||||||  |||||||| ||| ||||||| || | |||||    
T  14850537 gcaggtttctgatgctcaactttcgacttctgacaaatcaaacaggaatacacaaactgtgccacatcgcgtttcaacccagaccaccaaaacaacttct 14850438  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14850437 ttaaatcatgatacatcttcatagctcccggatgaatactcaagctacttctatgaatctcttcaagaatcattttcttc 14850358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7091250 - 7091452
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |||  || || ||||||||||||||||| |||| |||||||||    
T  7091250 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgataaatcaaacaagaatacacaaattgtgcaacatcacgtttcaa 7091349  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | | |||||| ||| ||||||||||||||||||||| ||| |||||| ||| |||||||||| |||||||||| ||||||||||    
T  7091350 tccagaccaccaaaacaacctctttagatcatgatacatcttcgtagctcccggataaatacttaagttacttctatggctctcttcaataatcattttc 7091449  T
Q  201 ttc 203  Q
    |||    
T  7091450 ttc 7091452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 1639618 - 1639424
Alignment:
Q  2 atctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa 101  Q
    |||||||| ||||||||| |||||||||||||||||||| |  |||||||| |||||||| || || ||||||||||| | ||| |||| |||||||||     
T  1639618 atctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttttgacaaaccaaacaagaatacacaaaatatgcaacatcacgtttcaat 1639519  T
Q  102 ccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    ||| ||||||| || | ||| || ||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  1639518 ccagaccaccaaaacaactttttcaaatcatgatacatcttcgtagctctcgggtgaatactcaagctacttctatgactctcttcaagaatcat 1639424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 14695062 - 14695133
Alignment:
Q  132 tgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  14695062 tgatacatcttcgtagctcccggatgagtactcaagctacttatatgactctcttcaagaatcattttcttc 14695133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 18614911 - 18614849
Alignment:
Q  93 cgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccaga 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18614911 cgtttcaaaccagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccaga 18614849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 15078476 - 15078647
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||||||||  || || | ||| ||||| || || |||| ||||||||| || |||||||| || |  ||||    
T  15078476 gcaggcttctgatgttcaaccttagacttctgacaaatcaaacatgcataaacaaactgagcaacatcacgtttcaatccgaaccaccaaaataatttct 15078575  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | || || ||||||||||| ||||||||  |||||||||| ||||||||||||||||| ||||| |||||||    
T  15078576 tcaagtcatgatacatctttgtagctcctggatgaatacttaagctacttctatgactttcttccagaatca 15078647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 15002795 - 15002624
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||| ||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  15002795 gcaggcttctgatgctcaaccttagacttttgacaagtcaaacatgcatagacaaaatgagcaacatcacgtttcaacccagaccaccaaaacaatttct 15002696  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| || ||||||||| |||||||||| ||||||||| | ||||| ||||| |||||||    
T  15002695 tcaaatcatgatacatttttgtagctcccggatgaatacttaagctacttttgtgactttcttctagaatca 15002624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 1648701 - 1648560
Alignment:
Q  31 tctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatc 130  Q
    |||||||||||| ||| ||||||||||||   || || | ||||||||| ||||| ||||  |  ||||||||| ||||||| || | |||||| |||||    
T  1648701 tctgatgctcaaccttagacttctgacaagtcaaacatgcatacacaaactgtgcgacatccctcttcaaaccagaccaccaaaacaacttcttcaaatc 1648602  T
Q  131 gtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
     || |||||||| ||||||||| |||||||||| ||||||||    
T  1648601 atggtacatctttgtagctcccggatgaatacttaagctact 1648560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 15358504 - 15358403
Alignment:
Q  71 atacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    ||||||||| || || |||| ||||||||||||| ||||||| || |  ||||| ||||| |||||||| |||||||||||| |||||||||| ||||||    
T  15358504 atacacaaactgagcaacatcacgtttcaaaccagaccaccaaaatagtttcttcaaatcatgatacattttcgtagctcccggatgaatacttaagcta 15358405  T
Q  171 ct 172  Q
    ||    
T  15358404 ct 15358403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 8706756 - 8706922
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||| |||||||| ||||  || || ||||||||||  || || | ||| ||||| ||||| |||| ||||||||| ||| ||||||| || |  |    
T  8706756 ccagcaggcttctgatgttcaactttagatttctgacaaatcaaacatgcatatacaaactgtgcaacatcacgtttcaatccagaccaccaaaacaatt 8706855  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    ||||||| || ||||||||||| ||||||| | |||||||||| ||| ||||| | ||||| |||||    
T  8706856 tctttaagtcatgatacatctttgtagctctcggatgaatacttaagttacttttgtgactttcttc 8706922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 195
Target Start/End: Original strand, 20891829 - 20891994
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| |||||||||||||  ||||| | ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||| | ||    
T  20891829 ttctgatgctcaaccttggacttctgacaaatcaagcaagcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttcttcagat 20891928  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | || |||||||| ||||| ||| | ||||||||||| |||||  | |||||||||||||||||||    
T  20891929 catggtacatctttgtagcccccgggtgaatactcaacctactcttgtgactctcttcaagaatca 20891994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 27901234 - 27901390
Alignment:
Q  31 tctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatc 130  Q
    |||||||||||| ||| ||||||||||||   || || | ||||||||| || || ||||  |  ||||||||| ||||||| || | |||||| |||||    
T  27901234 tctgatgctcaaccttagacttctgacaagtcaaacacgcatacacaaactgagcgacatccctcttcaaaccagaccaccaaaacaacttcttcaaatc 27901333  T
Q  131 gtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
     |||||||| || |||||| || |||||||||||||| ||||  ||||||| |||||    
T  27901334 atgatacatttttgtagcttccggatgaatactcaagttactcttatgactttcttc 27901390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 3264225 - 3264054
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  3264225 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 3264126  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  3264125 tcaaatcatggtacatttttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 3264054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 11206662 - 11206491
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  11206662 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 11206563  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  11206562 tcaaatcatggtacatttttgtagcccccgggtgaatactcaacctactattgtgactctcctcaagaatca 11206491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 29452968 - 29452797
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||| | ||| |||||||||||||| || |||| ||| || || |  || ||||  | |||||||||| ||||||| || |  ||||    
T  29452968 gcaggcttctgatgctccaccttggacttctgacaaaccaaacaggcataaacgaacttagcaacatctcttttcaaaccagaccaccaaaacagtttct 29452869  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| || ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  29452868 tcaaatcatgatacatttttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 29452797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 15246765 - 15246913
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||   || ||||||| || | |||||    
T  15246765 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcatagacaaactgagcaacatcacgtttcagctcagaccaccaaaacaacttct 15246864  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || || |||||||| || ||||||||| |||||||||| ||||||||    
T  15246865 tcaagtcatgatacatttttgtagctcccggatgaatacttaagctact 15246913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 15320054 - 15320153
Alignment:
Q  87 acattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctctt 186  Q
    |||| ||||||||||||  ||||||| || |  ||||| || |||||||||||||| |||| |||  |||||||||| ||||||||||| ||||| ||||    
T  15320054 acatcacgtttcaaaccggaccaccaaaacaatttcttcaagtcgtgatacatctttgtaggtcctggatgaatacttaagctacttctgtgactttctt 15320153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 33223764 - 33223935
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| ||||  || ||||||||||||   || || | ||||||||| || || ||||  ||||||||||   ||||||| || |  ||||    
T  33223764 gcaggcttctgatgttcaactttagacttctgacaagtcaaacatgcatacacaaactgagcaacatctcgtttcaaactggaccaccaaaacagtttct 33223863  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||| | ||||||||||| |||||  ||||||||||||| |||||||    
T  33223864 tcaaatcatggtacatctttgtagcccccgggtgaatactcaacctactcttatgactctcttctagaatca 33223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 15414460 - 15414294
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||| |||||||| ||||  || || |||||||||   || || | ||| ||||| ||||| |||| |||||| |||||  ||||||| || |  |    
T  15414460 ccagcaggcttctgatgttcaactttagatttctgacaagtcaaacatgcatatacaaactgtgcaacatcacgtttaaaaccggaccaccaaaacaatt 15414361  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    |||| || || ||||||||||| ||||||||  |||||||||| || |||||||| ||||| |||||    
T  15414360 tcttcaagtcatgatacatctttgtagctcctggatgaatacttaaactacttctgtgactttcttc 15414294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16251639 - 16251598
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaa 42  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  16251639 catctagagataccatcataccagcaggtttttgatgctcaa 16251598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 16148634 - 16148697
Alignment:
Q  106 accaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    ||||||| || | |||||| |||||||||||||| |||||||||||| |||| ||||| |||||    
T  16148634 accaccaaaacaacttcttcaaatcgtgatacattttcgtagctcccggatggatacttaagct 16148697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 16152780 - 16152843
Alignment:
Q  106 accaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    ||||||| || | |||||| |||||||||||||| |||||||||||| |||| ||||| |||||    
T  16152780 accaccaaaacaacttcttcaaatcgtgatacattttcgtagctcccggatggatacttaagct 16152843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 9291778 - 9291832
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| |||||||||||  | ||||| |||||||||||||| |||||||||||||    
T  9291778 aaatcttgatacatcttaatcgctcctagatgaatactcaaactacttctatgac 9291832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 14691743 - 14691809
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacat 90  Q
    |||||||||||||| |||| ||| ||||| |||||||  || ||||||||||| || ||||||||||    
T  14691743 gcaggtttctgatgttcaacctttgacttttgacaaatcaaacaggaatacaccaactgtgccacat 14691809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 15292487 - 15292433
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  15292487 aaatcttgatacatcttagttgctcctggatgaatactcaaactacttctatgac 15292433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 18614849 - 18614816
Alignment:
Q  170 acttctatgactctcttcaagaatcattttcttc 203  Q
    |||||| |||||||||||||||||||||||||||    
T  18614849 acttctgtgactctcttcaagaatcattttcttc 18614816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 163; Significance: 3e-87; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 66254 - 66456
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||    
T  66254 catctaaagataccatcataccagcaagtttttgatgctcaatcttcgacttctgacaaactaaacaggagtacacaaactgtgccacatcacgtttcaa 66353  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  66354 accagaccaccagaaaatcttctttaaatcgtgatacattttcgtagctcccagatggatactcaagctacttctatgactctcttcaagaatcattttc 66453  T
Q  201 ttc 203  Q
    |||    
T  66454 ttc 66456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 39277 - 39075
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  39277 catctaaggataccatcaaaccagcgggtttctgatgttcaatcttcgacttctgacaaactaaacaggaatacacaaattgtgccacatcgcgtttcaa 39178  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| ||||| ||||| | ||| ||||||||||| ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||    
T  39177 tccagaccaccataaaattttcttcagatcatgatacatctttgtagctcccgggtgaatactcaagctacttctatgagtctcttcaagaatcattttc 39078  T
Q  201 ttc 203  Q
    |||    
T  39077 ttc 39075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 3e-87; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27566579 - 27566377
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  27566579 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaacaggaatacacaaattgtgccacatcacgtttcaa 27566480  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  27566479 tccagaccaccagaaaatcttctttaaatcatgatacatctttgtagctcccggatgaatactcaagctacttttatgactctcttcaagaatcattttc 27566380  T
Q  201 ttc 203  Q
    |||    
T  27566379 ttc 27566377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 29591517 - 29591318
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  29591517 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 29591418  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29591417 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 29591318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 16626314 - 16626115
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  16626314 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 16626215  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16626214 cagaccaccagaaaatcttctttaaatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 16626115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 24312765 - 24312566
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  24312765 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 24312666  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24312665 cagaccactagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 24312566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 25113234 - 25113435
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  25113234 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 25113333  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  25113334 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 25113433  T
Q  201 tt 202  Q
    ||    
T  25113434 tt 25113435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 2874400 - 2874201
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    |||||||  |||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  2874400 tctaaaggcaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 2874301  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2874300 cagaccaccaaaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 2874201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19865369 - 19865571
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  19865369 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 19865468  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||| | ||  ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  19865469 tccagaccaccagaatatcttcttcagataatgatacatcttcgtagctcccggatgaatactcaagctactcctatgactctcttcaagaatcattttc 19865568  T
Q  201 ttc 203  Q
    |||    
T  19865569 ttc 19865571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1542683 - 1542482
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| | ||||||||  ||||||||    
T  1542683 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactatgccacatctcgtttcaa 1542584  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| |||    
T  1542583 accagaccaccagaaaatcttcttcaaatcgtgatacatcttcgtagctcccgggtgaatactcaagctacttctgtgactctcttcaagaatcatcttc 1542484  T
Q  201 tt 202  Q
    ||    
T  1542483 tt 1542482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28262796 - 28262595
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||| |||| ||||||||| ||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||  | ||||||    
T  28262796 catccaaaggtaccatcatcccagcgggtttctgatgctcgaccttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcctttcaa 28262697  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  28262696 accagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 28262597  T
Q  201 tt 202  Q
    ||    
T  28262596 tt 28262595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28341545 - 28341344
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||| |||| ||||||||| ||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||  | ||||||    
T  28341545 catccaaaggtaccatcatcccagcgggtttctgatgctcgaccttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcctttcaa 28341446  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  28341445 accagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 28341346  T
Q  201 tt 202  Q
    ||    
T  28341345 tt 28341344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16963044 - 16962845
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  || || || |||||||| ||||||||||  || |||||    
T  16963044 catctaacgataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaatcaaacaagagtacacaaactgtgccacatcgcgcttcaa 16962945  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || || ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16962944 tccagaccaccaaaatatattctttagatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 16962845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 27188120 - 27188319
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||| | ||||||||||||||||  |||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  27188120 tctaaaggtaccatcatcccaacgggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgagccacatctcgtttcaaac 27188219  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||| ||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  27188220 cagaccaccagaaaatcttcttcaaatcatgatacattttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27188319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 27261120 - 27260921
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||| | ||||||||||||||||  |||||||||||||||||||| |||||||||||||| || |||||||  ||||||||||    
T  27261120 tctaaaggtaccatcatcccaacgggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgagccacatctcgtttcaaac 27261021  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||| ||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  27261020 cagaccaccagaaaatcttcttcaaatcatgatacattttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27260921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 5838818 - 5838616
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||  || || ||||||||||| ||||| |||| |||||||||    
T  5838818 catctaacgataccatcataccagcaggtttctgatgctcgaccttcgacttctgacaaatcaaacaagaatacacaaactgtgcaacatcacgtttcaa 5838719  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||||||||||| || | |||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| || ||||||||||||    
T  5838718 tccaaaccaccaaaataacttcttcaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcctcgagaatcattttc 5838619  T
Q  201 ttc 203  Q
    |||    
T  5838618 ttc 5838616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22078289 - 22078087
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  || || ||||||||||| |||||||||| |||||||||    
T  22078289 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaactgtgccacatcacgtttcaa 22078190  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || |  || |||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  22078189 tccagaccaccaaaataatttttttagatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 22078090  T
Q  201 ttc 203  Q
    |||    
T  22078089 ttc 22078087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27331032 - 27330830
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  || || ||||||||||||||||||||||| ||||||||    
T  27331032 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgccacattgcgtttcaa 27330933  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||| || |||||||||| ||||||| | |||||||||||||||||||||||||||||||| |||||||| |||    
T  27330932 cccagaccaccaaaataacttctttagatcatgttacatcttcgcagctcccgggtgaatactcaagctacttctatgactctcttcgagaatcatcttc 27330833  T
Q  201 ttc 203  Q
    |||    
T  27330832 ttc 27330830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27391772 - 27391570
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  || || ||||||||||||||||||||||| ||||||||    
T  27391772 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgccacattgcgtttcaa 27391673  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||| || |||||||||| ||||||| | |||||||||||||||||||||||||||||||| |||||||| |||    
T  27391672 cccagaccaccaaaataacttctttagatcatgttacatcttcgcagctcccgggtgaatactcaagctacttctatgactctcttcgagaatcatcttc 27391573  T
Q  201 ttc 203  Q
    |||    
T  27391572 ttc 27391570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 22434553 - 22434753
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||  |||||||| |    
T  22434553 tctaacgataccatcataccagtaggtttctgatgctcaaccttcgacttctgacaaattaaacaggaatacacaaactgtgccacatcgcgtttcaatc 22434652  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    |  ||||||| || || ||||| | ||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434653 cggaccaccaaaatattttcttcagatcatgaaacatctttgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttctt 22434752  T
Q  203 c 203  Q
    |    
T  22434753 c 22434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 22442951 - 22443151
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||  |||||||| |    
T  22442951 tctaacgataccatcataccagtaggtttctgatgctcaaccttcgacttctgacaaattaaacaggaatacacaaactgtgccacatcgcgtttcaatc 22443050  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    |  ||||||| || || ||||| | ||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22443051 cggaccaccaaaatattttcttcagatcatgaaacatctttgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttctt 22443150  T
Q  203 c 203  Q
    |    
T  22443151 c 22443151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18407541 - 18407339
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  || || ||||||| ||| ||||| ||||  ||||||||    
T  18407541 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacaaaaactgtgcaacatcgcgtttcaa 18407442  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| || | || || | |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18407441 tccagactagcaaaacaacttctttagatcatgatacatcttcgtagctcccagatgaatactcaagttacttctatgactctcttcaagaatcattttc 18407342  T
Q  201 ttc 203  Q
    |||    
T  18407341 ttc 18407339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22762054 - 22761852
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||  || || ||||||| ||| ||||| ||||  ||||||||    
T  22762054 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgaaaaatcaaacaagaatacataaactgtgcaacatcgcgtttcaa 22761955  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  22761954 tccagaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcattttc 22761855  T
Q  201 ttc 203  Q
    |||    
T  22761854 ttc 22761852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 20636900 - 20636698
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||  || || ||||||||||| ||||| || |  ||||||||    
T  20636900 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaactgtgcaacgtcgcgtttcaa 20636801  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  20636800 tccggaccaccaaaataacttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcattttc 20636701  T
Q  201 ttc 203  Q
    |||    
T  20636700 ttc 20636698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25609460 - 25609258
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||  || || |||||||||||  |||| |||| || ||||||    
T  25609460 catctaaagataccatcataccagcaggtttctgatgctcaactttcgacttttgacaaatcaaacaagaatacacaaacggtgcaacatcacatttcaa 25609361  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  25609360 tccagaccaccaaaacaacttctttagatcatgatacatctttgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 25609261  T
Q  201 ttc 203  Q
    |||    
T  25609260 ttc 25609258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23079151 - 23079353
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||  || |||||||||||||||| ||| |||| |||||||||    
T  23079151 catctaaagataccatcatcccaacaggtttctgatgctcaactttcgacttctgacaaatcaaacaggaatacacaaattatgctacatcacgtttcaa 23079250  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | ||| || | ||| |||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  23079251 cccagaccaccaaaacaactttttcagatcatgatacattttcgtagctcccggatggatactcaagctacttctatgactctcttcaagaatcatcttc 23079350  T
Q  201 ttc 203  Q
    |||    
T  23079351 ttc 23079353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16927239 - 16927040
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||  ||  | || |||||||| ||||||||||  || |||||    
T  16927239 catctaaagacaccatcataccagcaggtttctgatgctcaattttcgacttctaacaaatcaaataagagtacacaaactgtgccacatcgcgcttcaa 16927140  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| ||  ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  16927139 tccagaccaccaaaatctcttctttagatcgtgatacatcttcgtagctcccgggtgaatactcaagctacttctgtgactctcttcaagaatcattttc 16927040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28291971 - 28291823
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||| |||| ||||||||| ||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||  | ||||||    
T  28291971 catccaaaggtaccatcatcccagcgggtttctgatgctcgaccttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcttttcaa 28291872  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagct 149  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  28291871 accagaccaccagaaaatcttctttagatcatgatacatcttcgtagct 28291823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15896776 - 15896978
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||| |||||||||||  ||||||||||||||||||||||  || ||||||||||||| ||  || ||||| ||||| |||||||||| |||||||||    
T  15896776 catctatagataccatcaacccagcaggtttctgatgctcaacttttgacttctgacaaattagacatgaatatacaaactgtgccacatcacgtttcaa 15896875  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | | |||| ||||| ||||||||||| ||||||||  |||| ||||||||| ||||| | |||||||||| ||||||||| |||    
T  15896876 cccagaccaccaaaataacctcttcaaatcatgatacatctttgtagctcctggatggatactcaagatacttgtgtgactctctttaagaatcatcttc 15896975  T
Q  201 ttc 203  Q
    |||    
T  15896976 ttc 15896978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 18197304 - 18197122
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa---ccaaaccaccagaaaatct 120  Q
    ||||||||||||||||||| ||| |||||||   |||  || |||||||||||||| |||||||||| |||||||||    ||  ||||||| || |  |    
T  18197304 gcaggtttctgatgctcaacctttgacttctagaaaatcaaacaggaatacacaaactgtgccacatcacgtttcaataatcccgaccaccaaaacaaat 18197205  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | || ||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  18197204 ttttcaaatcatgatacatcttggtagctcccggatgaatactcaagctacttctgtgactctcttcaagaatcatcttcttc 18197122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 18966867 - 18966696
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    ||||||| |||||||||   || |||||||||||||  || || |||||||||||||||| ||||| ||  ||||| | | |||| || || |  || ||    
T  18966867 caggtttatgatgctcaccttttgacttctgacaaatcaaacatgaatacacaaattgtggcacatcactattcaacctagaccagcaaaacaaattttt 18966768  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
     ||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  18966767 caaatcatgatacatctttgtagctcccggatgaatactcaagctacttctgtgactctcttcaagaatcat 18966696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 18795395 - 18795543
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||| | ||| |||||||| |||   || || | |||||||||||| || |||| ||| ||||||||  ||||||| || | ||| |    
T  18795395 gcaggcttctgatgctcgaccttagacttctggcaagtcaaacacgcatacacaaattgagcaacatcacgcttcaaaccggaccaccaaaacagctttt 18795494  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  18795495 tcaaatcatgatacatcttcgtagctcccggatggatactcaagctact 18795543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 19880003 - 19880151
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| ||||  || |||||||| |||   || |||| |||||||||||| || |||| ||| ||||||||| ||||| | || | ||| |    
T  19880003 gcaggcttctgatgttcaactttagacttctggcaagtcaaacaggcatacacaaattgagcaacatcacgcttcaaaccagaccactaaaacagctttt 19880102  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || |||||||||||||||||||||||| |||| ||||||||||||||    
T  19880103 tcaagtcgtgatacatcttcgtagctcccggatggatactcaagctact 19880151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 25768896 - 25769059
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||| ||||||||  ||||||| || |  ||||    
T  25768896 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgcttcaaaccggaccaccaaaacaatttct 25768995  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | ||||| || |||||||| ||||||||| |||||||||| ||||||||||| ||||| |||||    
T  25768996 taaaatcatggtacatctttgtagctcccggatgaatacttaagctacttctgtgactttcttc 25769059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 28282389 - 28282232
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  28282389 gcaggtttctggtgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 28282290  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  28282289 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 28282232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 19435707 - 19435855
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   || || | ||||| ||| || || |||| ||| ||||||||  ||||||| || |  ||||    
T  19435707 gcaggcttctgatgttcaaccttagacttctgacaagtcaaacacgcatacataaactgagcaacatcacgcttcaaaccggaccaccaaaacagtttct 19435806  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  19435807 tcaaatcatgatacatctttgtagctcccggatgaatactcaagctact 19435855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 18436309 - 18436485
Alignment:
Q  23 agcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaa----accaccagaaaat 118  Q
    ||||||||||||||| ||||  || ||||||| ||||| ||| || | ||||||||||||||||||||  |  ||||| |||     ||||||| || |     
T  18436309 agcaggtttctgatgttcaactttagacttctaacaaattaaacacgcatacacaaattgtgccacatctcacttcaacccacccagaccaccaaaataa 18436408  T
Q  119 cttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    |||||| ||||| |||||||| || |||| |||| |||||||||||||  ||||||| ||||| ||||| |||||||    
T  18436409 cttcttcaaatcatgatacatttttgtaggtcccggatgaatactcaaattacttctgtgactttcttccagaatca 18436485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 19488851 - 19488685
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||| |||| ||| ||||  || || ||||||||||  || || | ||| ||||| ||||| |||| ||||||||| ||  ||||||| || |  |    
T  19488851 ccagcaggcttctaatgatcaactttagatttctgacaaatcaaacatgcatatacaaactgtgcaacatcacgtttcaatccggaccaccaaaacaatt 19488752  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    |||| || || ||||||||||| ||||||||| |||||||||| ||||||||||| ||||| |||||    
T  19488751 tcttcaagtcatgatacatctttgtagctcccggatgaatacttaagctacttctgtgactttcttc 19488685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 28288117 - 28288071
Alignment:
Q  156 tgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  28288117 tgaatactcaagctacttctatgactctcttcaagaatcatcttctt 28288071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 8762509 - 8762360
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  8762509 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacacgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 8762410  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctactt 173  Q
    | ||||| || ||||| || ||||||||| | ||||||||||||||||||    
T  8762409 tcaaatcatggtacatttttgtagctcccgggtgaatactcaagctactt 8762360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 34645155 - 34645014
Alignment:
Q  31 tctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatc 130  Q
    ||||||| |||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||| |||||||||| |||||| || | ||| || || ||    
T  34645155 tctgatgttcaacctttgacttctgacaagtcaaacacgcatatacaaactgagcaacatcacgcttcaaaccaacccaccaaaacagctttttcaagtc 34645056  T
Q  131 gtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||| |||||||||||||||||| |||| ||||||||||||||    
T  34645055 gtggtacatcttcgtagctcccggatggatactcaagctact 34645014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 14381036 - 14380895
Alignment:
Q  31 tctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatc 130  Q
    ||||||| |||| ||| ||||||||||||   || || | ||||||||| || || |||| ||| ||||||||  ||||||| || |  ||||| |||||    
T  14381036 tctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcaacatcacgcttcaaaccggaccaccaaaacagtttcttcaaatc 14380937  T
Q  131 gtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
     || |||||||| ||||||||| |||||| ||||||||||||    
T  14380936 atggtacatctttgtagctcccggatgaacactcaagctact 14380895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 5296782 - 5296634
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||| ||   ||||| | ||||||||| || || || | ||||||||||||  ||||||| || |  ||||    
T  5296782 gcaggcttctgatgctcaaccttagacttctgataagtcaagcatgcatacacaaactgagcaacgtcacgtttcaaaccggaccaccaaaacagtttct 5296683  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || ||||| || ||||| ||| | |||||||||||||||||    
T  5296682 tcaaatcatggtacatttttgtagcccccgggtgaatactcaagctact 5296634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 18837387 - 18837328
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||||||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  18837387 tctttaaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 18837328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 19454131 - 19454273
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    |||||||| |||| ||| ||||||| ||||   || || | |||||||||||| || || | ||| ||||||||  ||||||| || | |||||| ||||    
T  19454131 ttctgatgttcaaccttagacttctaacaagtcaaacatgcatacacaaattgagcgacgtcacgcttcaaaccggaccaccaaaacagcttcttcaaat 19454230  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || ||||| |||||||||||| |||||||||| ||| ||||    
T  19454231 catgttacattttcgtagctcccggatgaatacttaagttact 19454273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 18572453 - 18572512
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  18572453 tcttcaaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 18572512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 14624831 - 14624777
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  14624831 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 14624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 16381847 - 16381793
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  16381847 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 16381793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 23997055 - 23997109
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  23997055 aaatcttgatacatcttagttgctcctggatgaatactcaaactacttctatgac 23997109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 16098850 - 16098911
Alignment:
Q  119 cttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||||| ||||| ||||||||||| || |||||  ||||||||||||| ||||| |||||||    
T  16098850 cttcttcaaatcctgatacatcttagtcgctcctggatgaatactcaaactactcctatgac 16098911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 3862 - 3660
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  3862 catctaaagataccatcttaccagcgggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaactgtgccacatctcgtttcaa 3763  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3762 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagcacccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 3663  T
Q  201 ttc 203  Q
    |||    
T  3662 ttc 3660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 159; Significance: 7e-85; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 9445 - 9647
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  9445 catctaaagataccatcttaccagcgggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaactgtgccacatctcgtttcaa 9544  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9545 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagcacccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 9644  T
Q  201 ttc 203  Q
    |||    
T  9645 ttc 9647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 33030 - 32828
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  33030 catctaaagataccatcataccagcgggtttctgatgctcaatctttgacctctgacaaaccaaacaggaatacacaaactgtgccacatctcgtttcaa 32931  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  32930 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcctcaagaatcattttc 32831  T
Q  201 ttc 203  Q
    |||    
T  32830 ttc 32828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21325260 - 21325058
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||    
T  21325260 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaacaggaatatacgaattgtgcaacatcacgtttcaa 21325161  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  21325160 tccagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 21325061  T
Q  201 ttc 203  Q
    |||    
T  21325060 ttc 21325058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24710483 - 24710684
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  24710483 catctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 24710582  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  24710583 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 24710682  T
Q  201 tt 202  Q
    ||    
T  24710683 tt 24710684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 41608377 - 41608178
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  41608377 tctaaaggtaccatcattccagcaggtttctgatgttcaactttcgacttctgacaaactaaacaggaatacacaaattgtgccacatctcgtttcaaac 41608278  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41608277 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 41608178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21145035 - 21144834
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  21145035 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 21144936  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  21144935 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 21144836  T
Q  201 tt 202  Q
    ||    
T  21144835 tt 21144834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 9610587 - 9610786
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  9610587 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 9610686  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9610687 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 9610786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 22324848 - 22324649
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  22324848 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 22324749  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  22324748 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaaactacttctatgactctcttcaagaatcatcttctt 22324649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 24262821 - 24263020
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  24262821 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 24262920  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  24262921 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgaccctcttcaagaatcatcttctt 24263020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 27371720 - 27371919
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  27371720 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 27371819  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27371820 cagaccaccagaaaatcttctttaaatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27371919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 10869301 - 10869500
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  10869301 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 10869400  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  10869401 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctactcctatgactctcttcaagaatcatcttctt 10869500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16925809 - 16926010
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||| ||||  ||||||||    
T  16925809 catctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgctacatctcgtttcaa 16925908  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  16925909 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 16926008  T
Q  201 tt 202  Q
    ||    
T  16926009 tt 16926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16999449 - 16999650
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||| ||||  ||||||||    
T  16999449 catctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgctacatctcgtttcaa 16999548  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  16999549 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 16999648  T
Q  201 tt 202  Q
    ||    
T  16999649 tt 16999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 24876743 - 24876542
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  24876743 catctaaaggtaccatcattccggcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 24876644  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||    
T  24876643 accaaaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctactcctgtgactctcttcaagaatcatcttc 24876544  T
Q  201 tt 202  Q
    ||    
T  24876543 tt 24876542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 27218469 - 27218666
Alignment:
Q  5 taaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaacca 104  Q
    ||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||| ||||||    
T  27218469 taaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgttttaaacca 27218568  T
Q  105 aaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
     ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27218569 gaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 27218666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 16923340 - 16923539
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  16923340 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 16923439  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16923440 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 16923539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 16982603 - 16982802
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  16982603 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 16982702  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16982703 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 16982802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 17064168 - 17064367
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  17064168 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 17064267  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17064268 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 17064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 17067826 - 17068025
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  17067826 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 17067925  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17067926 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 17068025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24707476 - 24707274
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||  ||||||||    
T  24707476 catctaaagataccatcgtaccagcaggtttctaatgttcaatcttcgacttctgacaaactaaacaagaatacacaaattgtgccacatcgcgtttcaa 24707377  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||||||||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||| |||||||    
T  24707376 tccggaccaccagaaaatcttctttaaatcatgatacatcttcgtagatcccgggtgaatactcaagctacttctatgactctcttcaagaaccattttc 24707277  T
Q  201 ttc 203  Q
    |||    
T  24707276 ttc 24707274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 44385563 - 44385362
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||| | |  |||||||||||||||||||| |||||||||| ||| | ||||||||  ||||||||    
T  44385563 catctaaaggtaccatcatcccagcgggtttctgatgcccgactttcgacttctgacaaactaaacaggaatacataaactatgccacatctcgtttcaa 44385464  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  44385463 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 44385364  T
Q  201 tt 202  Q
    ||    
T  44385363 tt 44385362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22756459 - 22756257
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||| || |||||||||||||| ||||||||||  ||||||||    
T  22756459 catctaaagataccatcatactagcaggtttctgatgttcaatcttcgacttcttacaaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 22756360  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | |||||||||| |||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  22756359 tctagaccaccagaatatcttctttagatcatgatacatcttcgtagctcccggttgaatactcaagctacttctatgactctcttcaagaattattttc 22756260  T
Q  201 ttc 203  Q
    |||    
T  22756259 ttc 22756257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 23107724 - 23107522
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  23107724 catctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 23107625  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||| |||||| |||||||||| ||| ||||||||||||||||||||| ||| |||||||||| |||||||||| ||||||||| |||||||||||    
T  23107624 tccagaccgccagaatatcttctttagatcatgatacatcttcgtagctcccggattaatactcaagttacttctatggctctcttcaggaatcattttc 23107525  T
Q  201 ttc 203  Q
    |||    
T  23107524 ttc 23107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24675938 - 24676140
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||||  ||||||| || |||||||||||||| ||||||||||  ||||||||    
T  24675938 catctaaagataccatcataccagcaagtttctaatgctcaatcttcgactttagacaaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 24676037  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||| | ||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  24676038 tccagaccaccagaatatcttcttcagatcatgatacatcttcgtagctcccggatgaatactcaggctacttctatgactctcttcaagaatcattttc 24676137  T
Q  201 ttc 203  Q
    |||    
T  24676138 ttc 24676140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21890712 - 21890510
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||||||||||| ||| |||| |||||||||||||||||  || || ||||||||||||||||| ||||  || |||||    
T  21890712 catctaaagacaccatcataccagcaggtttctaatgttcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgcaacatcgcgcttcaa 21890613  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21890612 tccggaccaccaaaacaacttctttagatcgtggtacatcttcgtagctcctagatgaatactcaagctacttctatgactctcttcaagaatcattttc 21890513  T
Q  201 ttc 203  Q
    |||    
T  21890512 ttc 21890510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23066840 - 23067042
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||  || ||  |||||||||| ||||| | ||  ||||||||    
T  23066840 catctaaagacaccatcataccagtaggtttctgatgctcaaccttcgacttctgacaaatcaaacaataatacacaaactgtgcaatatcgcgtttcaa 23066939  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  23066940 tccagaccaccaaaacaacttctttagatcgtgatacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcattttc 23067039  T
Q  201 ttc 203  Q
    |||    
T  23067040 ttc 23067042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 24819657 - 24819478
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  || ||||| |||||||  || |||||||||||||||||||||||||||| |||||| | | ||||||| || | | |||    
T  24819657 gcaggtttctgatgctcaacttttgacttttgacaaagcaaacaggaatacacaaattgtgccacattacttttcaacctagaccaccaaaacaacctct 24819558  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||  |||||||||||  |||||||| |||| ||||||||||||||||| |||||||||| |||| |||| ||||||    
T  24819557 tcaaataatgatacatctttctagctcccggatggatactcaagctacttctgtgactctctttaagagtcatcttcttc 24819478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 45529980 - 45530155
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||| || | ||||||||||||||||||||  || ||||| ||  ||||||| || | ||    
T  45529980 ccagcaggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaattgtgccacatctcgcttcaacccggaccaccaaaacaact 45530079  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    |||| ||||| |||||||| || ||||||||| |||||||||||||  ||||||| ||||| ||||| ||||||||    
T  45530080 tcttcaaatcatgatacatttttgtagctcccggatgaatactcaaattacttctgtgactttcttctagaatcat 45530155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 21 - 196
Target Start/End: Complemental strand, 30210890 - 30210716
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||| || | ||||||||||||||||||||  || ||||| ||  ||||||| || | ||    
T  30210890 ccagcaggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaattgtgccacatctcgcttcaacccggaccacca-aacaact 30210792  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    |||| ||||| |||||||| || ||||||||| |||||||||||||  ||||| | ||||| ||||| ||||||||    
T  30210791 tcttcaaatcatgatacatttttgtagctcccggatgaatactcaaattacttttgtgactttcttctagaatcat 30210716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 27365050 - 27364905
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   || || | |||||||||||| || |||| ||| ||||||||| ||||||| || | ||| |    
T  27365050 gcaggcttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaattgagcaacatcacgcttcaaaccagaccaccaaaacagctttt 27364951  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||    
T  27364950 tcaaatcgtgatacatcttcgtagctcccggatggatactcaagct 27364905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 23277248 - 23277396
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   ||||| | ||| |||||||| || || | | | ||||||||  ||||||| || | |||||    
T  23277248 gcaggcttctgatgttcaaccttagacttctgacaactcaagcacgcatatacaaattgagcgacgtcatgcttcaaaccggaccaccaaaatagcttct 23277347  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  23277348 tcaaatcatgatacatctttgtagctcccggatgaatactcaagctact 23277396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 1064223 - 1064394
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||| || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  1064223 gcaggcttctgatgctcaaccttggacttctgacaaaccaaacaggcataaacaaactgagcaacatcccttttcaaaccggaccaccaaaacagtttct 1064322  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  1064323 tcaaatcatggtacatctttgtagcccccgggtgaatactcaaactactcttgtgactctcctcaagaatca 1064394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 27788213 - 27788370
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||| |    
T  27788213 gcaggtttctggtgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctttt 27788312  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  27788313 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 27788370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 12574825 - 12574982
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||||||||| || |||| ||| ||||||||||||  ||| || | ||||||||| || || ||||  || ||||| ||| ||||||| || | ||  |    
T  12574825 gcaggtttctggtgttcaaccttagacttctgacaagttaaacatgcatacacaaaatgagcaacatctcgcttcaacccagaccaccaaaacagctctt 12574924  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    | ||||| ||||||||||||||||||||| ||||||| || ||||||||  |||||||    
T  12574925 tcaaatcatgatacatcttcgtagctcccggatgaatgcttaagctactcttatgact 12574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 24949061 - 24949209
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||| ||   || || | ||||||||| || || || | ||| |||||||   ||||||| || | |||||    
T  24949061 gcaggcttctgatgttcaaccttagacttctgataagtcaaacatgcatacacaaaatgagcaacgtcacgcttcaaactggaccaccaaaacagcttct 24949160  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  24949161 tcaaatcatgatacattttcgtagctcccagatgaatacttaagctact 24949209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 19651976 - 19651875
Alignment:
Q  71 atacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    ||||||||| || || |||| ||| ||||||||  ||||||| |  | |||||| ||||| |||||||| |||||||||||| |||||||| ||||||||    
T  19651976 atacacaaaatgagcaacatcacgcttcaaaccggaccaccaaatcagcttcttcaaatcatgatacattttcgtagctcccggatgaatattcaagcta 19651877  T
Q  171 ct 172  Q
    ||    
T  19651876 ct 19651875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 11357845 - 11357674
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  11357845 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatcccttttcaaaccggaccaccaaaacagtttct 11357746  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | || || |||||||| || ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  11357745 tcaagtcatgatacatttttgtagcccctgggtgaatactcaaactactcttgtgactctcctcaagaatca 11357674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 12640107 - 12640048
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| |||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  12640107 tcttcaaatcctgatacatcttcgttgctcctggatgaatactcaaactacttctatgac 12640048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 27210071 - 27210000
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaag 167  Q
    ||||||||| ||||||| || | |||||| || || |||||||| |||||||||||| ||||||||||||||    
T  27210071 ttcaaaccagaccaccaaaacaacttcttcaagtcatgatacattttcgtagctcccggatgaatactcaag 27210000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 20828731 - 20828902
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||| |||||  || |||| ||| ||||| || || ||||  | ||| |||||  ||||||| || |  ||||    
T  20828731 gcaggcttctgatgctcaaccttggacttctaacaaatcaaacaggcataaacaaactgagcaacatccctttttaaaccggaccaccaaaacagtttct 20828830  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  20828831 tcaaatcatggtacatctttgtagcccctgggtgaatactcaacctactcttgtgactctcctcaagaatca 20828902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 20833457 - 20833628
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||| |||||  || |||| ||| ||||| || || ||||  | ||| |||||  ||||||| || |  ||||    
T  20833457 gcaggcttctgatgctcaaccttggacttctaacaaatcaaacaggcataaacaaactgagcaacatccctttttaaaccggaccaccaaaacagtttct 20833556  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  20833557 tcaaatcatggtacatctttgtagcccctgggtgaatactcaacctactcttgtgactctcctcaagaatca 20833628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 24569542 - 24569483
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || ||||| ||||||||||| || |||||||||||||    
T  24569542 tcttcaaatcctgatacatcttagtcgctcctagatgaatacttaaactacttctatgac 24569483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 31831130 - 31831301
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || || | ||| ||||| || || ||||  | ||||| |||  ||||||| || | |||||    
T  31831130 gcaggcttctgatgctcaaccttagacttctgacaaatcaaacatgcataaacaaactgagcaacatctcttttcataccggaccaccaaaacagcttct 31831229  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||  | ||||||||||| |||||  | |||||||| ||||||||||    
T  31831230 tcaaatcatggtacatttttgtagcccctgggtgaatactcaacctactcttgtgactctcctcaagaatca 31831301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 23816906 - 23816858
Alignment:
Q  132 tgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  23816906 tgatacatcttagtcgctcctggatgaatactcaaactacttctatgac 23816858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 24831051 - 24831003
Alignment:
Q  132 tgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  24831051 tgatacatcttagttgctcctggatgaatactcaaactacttctatgac 24831003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 7e-85; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16078182 - 16077980
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||| || ||||||    
T  16078182 catctaaagataccatcataccagcaagtttctgatgctcaatcttcgacttctgacagactaaacaggaatacacaaactgtgccacatcacatttcaa 16078083  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  16078082 accagaccactagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaattattttc 16077983  T
Q  201 ttc 203  Q
    |||    
T  16077982 ttc 16077980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17044541 - 17044339
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||   |||||||    
T  17044541 catctaaagataccatcataccagcaggtttctgatgctcaatctttgacttctgacaaactaagcaggaatacacaaactttgccacatcttgtttcaa 17044442  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  17044441 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccgggtggatactcaagctacttctatgactctcttcaagaatcattttc 17044342  T
Q  201 ttc 203  Q
    |||    
T  17044341 ttc 17044339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 21837785 - 21837978
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  21837785 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 21837884  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21837885 cagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcat 21837978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 16350123 - 16349924
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  16350123 tctaaaggtaccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 16350024  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16350023 cagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttctt 16349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 51333017 - 51332818
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  51333017 tctaaaggtaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 51332918  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  51332917 cagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 51332818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21831136 - 21831337
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||| |||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  21831136 catctaaaggtaccatcattccagcaggcttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 21831235  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  21831236 accagaccaccagaaaatcttctttaaatcatgataaatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 21831335  T
Q  201 tt 202  Q
    ||    
T  21831336 tt 21831337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 41353186 - 41352987
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    ||||||| ||||||||| ||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  41353186 tctaaaggtaccatcatcccagcgggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaaac 41353087  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    || ||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  41353086 cagaccaccagaaaatcttcttcaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttctt 41352987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21749774 - 21749976
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||  || || |||||||||||||||||||||| |||||||||    
T  21749774 catctagagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgccacatcacgtttcaa 21749873  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || |||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  21749874 tccagaccaccaaaacatcttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcattttc 21749973  T
Q  201 ttc 203  Q
    |||    
T  21749974 ttc 21749976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 33390551 - 33390354
Alignment:
Q  5 taaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaacca 104  Q
    ||||| ||||||||| ||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||| ||||||||||  ||||||||||||    
T  33390551 taaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctggcaaactaaacaggaatacacaaactgtgccacatctcgtttcaaacca 33390452  T
Q  105 aaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
     ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  33390451 gaccaccagaaaatcttctttaaatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcgagaatcatcttctt 33390354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19107201 - 19107402
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| || ||||||||||| ||||||||||  || |||||    
T  19107201 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttctgacaaactaaacatgaatacacaaactgtgccacatctcgcttcaa 19107300  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || || ||||||||||||||||| |||    
T  19107301 accaaaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctactcctgtggctctcttcaagaatcatcttc 19107400  T
Q  201 tt 202  Q
    ||    
T  19107401 tt 19107402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 50619770 - 50619568
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||| || ||||||||||||||||||||||  |||||||| |||||||  || |||||||||||||| |||||||||| |||||||||    
T  50619770 catctaaagataccataatcccagcaggtttctgatgctcaactttcgacttttgacaaatcaaacaggaatacacaaactgtgccacatcacgtttcaa 50619671  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | ||| || ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  50619670 tccagaccaccaaaacaactttttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttttatgactctcttcaagaatcattttc 50619571  T
Q  201 ttc 203  Q
    |||    
T  50619570 ttc 50619568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 20139663 - 20139865
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||||||||||| ||||||||  |||||||| |||||||  || || ||||| ||||| ||||| |||| |||||||||    
T  20139663 catctaatgataccatcataccagcaggtttctaatgctcaactttcgacttttgacaaatcaaacaagaatagacaaactgtgcaacatcacgtttcaa 20139762  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  20139763 tccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 20139862  T
Q  201 ttc 203  Q
    |||    
T  20139863 ttc 20139865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 20250635 - 20250836
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||  ||  | ||||||||||| ||||| |||| ||||||||     
T  20250635 catctaaagacaccatcataccagcaggtttctgatgctcaactttcgacttctgacaaatcaaataagaatacacaaactgtgcaacatcacgtttcag 20250734  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     |||| |||||| || | |||||||| ||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  20250735 tccaa-ccaccaaaacaacttctttagatcatgatacatcttcgtagctcccgaatgaatactcaagttacttctatgactctcttcaagaatcattttc 20250833  T
Q  201 ttc 203  Q
    |||    
T  20250834 ttc 20250836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22361770 - 22361568
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||  || || ||||||||||| | ||| || |  ||||||||    
T  22361770 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaactatgcaacgtcgcgtttcaa 22361671  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||| ||||| ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||    
T  22361670 tccagaccaccaaaacaacttctttagatcatgatagatcttcgtagctcccggatgaatactcaagtttcttctatgactctcttcaagaatcattttc 22361571  T
Q  201 ttc 203  Q
    |||    
T  22361570 ttc 22361568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 16373385 - 16373564
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  |||||||||| | |||  ||||| |||||||||||||||| ||| | ||||||||| ||| ||||||| || | |||||    
T  16373385 gcaggtttctgatgctcaactttcgacttcttaaaaatcaagcaagaatacacaaattgtgtcacgtcacgtttcaatccagaccaccaaaacaacttct 16373484  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16373485 tcaaatcatgatacatcttcgcagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttcttc 16373564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 22109878 - 22110057
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||| ||||||||||  ||| |||||| |||||  || |||||||||||||| |||||||||| | ||||||| ||| ||||||| || | |||||    
T  22109878 gcaggtttttgatgctcaactttcaacttctaacaaatcaaacaggaatacacaaactgtgccacatcatgtttcaacccagaccaccaaaacaacttct 22109977  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||||||| |||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22109978 ttaaatcgtggtacatcttcgtagctcccgggtgaatactcaagttacttctatgactctcttcaagaatcattttcttc 22110057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 22113727 - 22113906
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||| ||||||||||  ||| |||||| |||||  || |||||||||||||| |||||||||| | ||||||| ||| ||||||| || | |||||    
T  22113727 gcaggtttttgatgctcaactttcaacttctaacaaatcaaacaggaatacacaaactgtgccacatcatgtttcaacccagaccaccaaaacaacttct 22113826  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||||||| |||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22113827 ttaaatcgtggtacatcttcgtagctcccgggtgaatactcaagttacttctatgactctcttcaagaatcattttcttc 22113906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 21025074 - 21025208
Alignment:
Q  69 gaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagc 168  Q
    ||||||||||| ||||||||||  |||||||| ||| |||||||||| |||||||||| ||| ||||||||||||||||||||| | |||||||||||||    
T  21025074 gaatacacaaactgtgccacatcgcgtttcaatccagaccaccagaatatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagc 21025173  T
Q  169 tacttctatgactctcttcaagaatcattttcttc 203  Q
    ||||||||||||||| |||||||||||||||||||    
T  21025174 tacttctatgactcttttcaagaatcattttcttc 21025208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19760392 - 19760204
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||  ||| ||| ||||||||||||||       ||| |||||||  || || ||||| ||||| |||||||||| |||||||||    
T  19760392 catctaaagataccatcaacccaacagatttctgatgctcaa-------cttttgacaaatcaaacatgaatatacaaactgtgccacatcacgtttcaa 19760300  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
     ||| ||||||| || | |||||||||||| |||||||||||  |||||||  |||| ||||||||||||||| | ||||||||||||||||||||    
T  19760299 cccagaccaccaaaacaacttctttaaatcatgatacatctttatagctcctggatggatactcaagctacttatgtgactctcttcaagaatcat 19760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 20937749 - 20937846
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||| ||||||||||  ||||||||    
T  20937749 tctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacagactaaacaggaatacacaaactgtgccacatctcgtttcaa 20937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 20835391 - 20835243
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||| ||||||||   || || | ||||||||| || || |||| ||||||||| ||| ||||||| || | |||||    
T  20835391 gcaggcttctgatgttcaaccttagacatctgacaagtcaaacatgcatacacaaactgagcaacatcacgtttcaacccagaccaccaaaacagcttct 20835292  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || || |||||||| |||||||||||| |||||||||||||||||||    
T  20835291 tcaagtcatgatacattttcgtagctcccggatgaatactcaagctact 20835243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 20939566 - 20939418
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  20939566 gcaggcttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaatagcttct 20939467  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| |||||||||||| |||||||||||||||||||    
T  20939466 tcaaatcatgatacattttcgtagctcccggatgaatactcaagctact 20939418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 19855161 - 19855307
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | |||||||| ||| || | ||  |||||||| ||| ||||||| || | | |||    
T  19855161 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcatacacaatttgagcaatatcccgtttcaacccagaccaccaaaacagcgtct 19855260  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    | ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  19855261 tcaaatcatgatacattttcgtagctcccagatgaatacttaagcta 19855307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 19662640 - 19662492
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||| |||||   || || | |||||||||||| || |||| ||| ||||||||  ||||||| || | |||||    
T  19662640 gcaggcttctgatgttcaaccttagacttcagacaagtcaaacatgcatacacaaattgagcgacatcacgcttcaaaccggaccaccaaaacagcttct 19662541  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| ||||||||| || || ||||||| ||||||||    
T  19662540 tcaaatcatgatacattttcgtagcttccggacgaatacttaagctact 19662492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 24099106 - 24098958
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||| ||||| || || |||| | | ||||||||  ||||||| || |  ||||    
T  24099106 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcaagcataaacaaaatgagcaacatcatgcttcaaaccggaccaccaaaacagtttct 24099007  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||| ||||||||| | |||||||||||||||||    
T  24099006 tcaaatcatggtacatctttgtagctcccgggtgaatactcaagctact 24098958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 20295268 - 20295439
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  20295268 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 20295367  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | | ||| || ||||| || ||||| ||| | ||||||||||| |||||  | |||||||||||||||||||    
T  20295368 tcagatcatggtacatttttgtagcccccgggtgaatactcaacctactcttgtgactctcttcaagaatca 20295439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 21951765 - 21951936
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  21951765 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatcccttttcaaaccggaccaccaaaacagtttct 21951864  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| ||| |||| || ||||| ||| | ||||||||||| |||||  | |||||||||||||| ||||    
T  21951865 tcaaatcatgaaacatatttgtagcccccgggtgaatactcaacctactcttgtgactctcttcaaggatca 21951936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 31539500 - 31539329
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  31539500 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatcccttttcaaaccggaccaccaaaacagtttct 31539401  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| |||||||| ||  | ||||||||||| |||||  | |||||||| || |||||||    
T  31539400 tcaaatcatgatacattttcgtagcccctgggtgaatactcaacctactcttgtgactctcctccagaatca 31539329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 20830793 - 20830739
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  20830793 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 20830739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 8639 - 8836
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||  ||||||||    
T  8639 catctaaagataccatcataccagcaggtttctgatgctcaatctttgacttctgacaaactaagcaggaatacacaaactttgccacatctcgtttcaa 8738  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattt 198  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  8739 accagaccaccagaaaatcttctttaaatcgtcatacatcttcgtagctcccggatggatactcaagctacttctatgactctcttcaagaatcattt 8836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22716 - 22918
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||    
T  22716 catctagagataccatcataccagcaggtttctgatgctcaatctttgacttctgacaaactaaacaggaatatacaaactgtgccacatctcgtttcaa 22815  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  22816 accagaccaccaaaaaattttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagctacttatatgactctcttcaagaatcattttc 22915  T
Q  201 ttc 203  Q
    |||    
T  22916 ttc 22918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 3043 - 3245
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  3043 catctaaagataccatcataccagcaggtttctgatgttcaatcgtcgacttctgacaaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 3142  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3143 tccagaccaccagaatatcttctttagatcatgatacatcttcgtagctcccaggtgaatactcaagctacttctatgactctcttcaagaatcattttc 3242  T
Q  201 ttc 203  Q
    |||    
T  3243 ttc 3245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 181048 - 181250
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  181048 catctaaagataccatcataccagcaggtttctgatgttcgatcttcgacttctgacaaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 181147  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  181148 tccagaccaccagaatatcttcttcagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 181247  T
Q  201 ttc 203  Q
    |||    
T  181248 ttc 181250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 100986 - 100849
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||||||||  || || | ||||||||| || || |||| ||| |||||| || ||||||| || | |||||    
T  100986 gcaggcttctgatgttcaaccttagacttctgacaaatcaaacacgcatacacaaactgagcaacatcacgcttcaaatcagaccaccaaaacagcttct 100887  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaata 161  Q
    | ||||| ||||||||||| ||||||||||||||||||    
T  100886 tcaaatcatgatacatctttgtagctcccagatgaata 100849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 56894 - 57068
Alignment:
Q  29 tttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaa 128  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  56894 tttctgatgctcaattttcgacttctgacaaactaaacaggaatacacaaattgtgccacatcacgtttcaaaccagaccaccagaaaatcttctttaaa 56993  T
Q  129 tcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||    
T  56994 tcgtgatacatcttcgtagctcccgggtggatactcaagctacttctatgactctcttcaagaatcattttcttc 57068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 203
Target Start/End: Complemental strand, 196934 - 196733
Alignment:
Q  2 atctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa 101  Q
    ||||||||||||||||||| |||  |||||||||||||||| |||||||||||||||||| || || ||||||||||| | ||||||||  ||||||||     
T  196934 atctaaagataccatcatatcagtgggtttctgatgctcaatcttcgacttctgacaaaccaaacaagaatacacaaactatgccacatctcgtttcaat 196835  T
Q  102 ccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttct 201  Q
    ||| ||||||| ||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  196834 ccagaccaccataaaatcttctttagatcatgatacatcttcgtagctcccggttgaatactcaagctacttctatggctctcctcaagaatcattttct 196735  T
Q  202 tc 203  Q
    ||    
T  196734 tc 196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 19480 - 19322
Alignment:
Q  45 ttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcg 144  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||| ||| |||||||||| |||||||||||| | ||||||||||| |    
T  19480 ttcgacttctgacaaactaaacaggaatacacaaactgtgctacatcacgtttcaatccagaccaccagaagatcttctttaaaccatgatacatctttg 19381  T
Q  145 tagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  19380 tagctcccggatgaatactcaagctacttatatgactctattcaagaatcattttcttc 19322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 7788 - 7989
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||| |||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  7788 catctaaaggtaccatcattccagcaggcttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 7887  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  7888 accagaccaccagaaaatcttctttaaatcatgataaatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 7987  T
Q  201 tt 202  Q
    ||    
T  7988 tt 7989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 63488 - 63286
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||  | |||||||||||||| || |||||||  ||||||||    
T  63488 catctaaagataccatcataccagcaggtttcttatgttcaatcttcgacttctgacaaacctaacaggaatacacaaactgcgccacatcgcgtttcaa 63389  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  63388 tccagaccaccagaatatcttctttagatcgtgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 63289  T
Q  201 ttc 203  Q
    |||    
T  63288 ttc 63286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 138; Significance: 2e-72; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 109268 - 109067
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||  |||||||| ||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  109268 catctaaaggcaccatcatcccagcgggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 109169  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  109168 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcatcttc 109069  T
Q  201 tt 202  Q
    ||    
T  109068 tt 109067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 113431 - 113577
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| ||||  || |||||||| |||  ||| || | ||||||||| |  || |||| ||| ||||||| | ||||||| || | |||||    
T  113431 gcaggcttctgatgttcaactttagacttctggcaagttaaacatgcatacacaaactaagcaacatcacgcttcaaactagaccaccaaaatagcttct 113530  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    | || |||||||||||||||||||||||| |||| ||||||||||||    
T  113531 tcaagtcgtgatacatcttcgtagctcccggatggatactcaagcta 113577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 95364 - 95294
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaa 166  Q
    ||||||||| ||||||| || | |||||| || || |||||||| |||||||||||| |||||||||||||    
T  95364 ttcaaaccagaccaccaaaacaacttcttcaagtcatgatacattttcgtagctcccggatgaatactcaa 95294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 138; Significance: 2e-72; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 44003 - 44204
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  44003 catctaaaggtaccatcattccagcaggtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatctcgtttcaa 44102  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||| |||    
T  44103 accagaccaccagaaaatcttcttcaaatcgtgatacatcttcgtagctcccgagtgaatactcaagctacttctgtgactctcttcaagaatcatcttc 44202  T
Q  201 tt 202  Q
    ||    
T  44203 tt 44204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 9323 - 9524
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| |  |||||||||||||||||||  |||||||||||||| ||||||||||  ||||||||    
T  9323 catctaaaggtaccatcattccggcaggtttctgatgctcgactttcgacttctgacaaactagacaggaatacacaaactgtgccacatctcgtttcaa 9422  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| || |||||||||||||||||||| |||    
T  9423 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatggatactcaagctactcctgtgactctcttcaagaatcatcttc 9522  T
Q  201 tt 202  Q
    ||    
T  9523 tt 9524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15785 - 15986
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| |  |||||||||||||||||||  |||||||||||||| ||||||||||  ||||||||    
T  15785 catctaaaggtaccatcattccggcaggtttctgatgctcgactttcgacttctgacaaactagtcaggaatacacaaactgtgccacatctcgtttcaa 15884  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| || |||||||||||||||||||| |||    
T  15885 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatggatactcaagctactcctgtgactctcttcaagaatcatcttc 15984  T
Q  201 tt 202  Q
    ||    
T  15985 tt 15986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 49948 - 49803
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   || || | |||||||||||| || |||| ||| |||||||||  |||||| || | ||| |    
T  49948 gcaggcttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaattgagcaacatcacgcttcaaaccaggccaccaaaacagctttt 49849  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||    
T  49848 tcaaatcgtgatacatcttcgtagctcccggatggatactcaagct 49803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 955 - 872
Alignment:
Q  119 cttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    |||||| ||||| |||||||| || ||||||||| |||||||||||||||||||| | ||||||||||| |||||||| |||||    
T  955 cttcttcaaatcatgatacatttttgtagctcccggatgaatactcaagctacttttgtgactctcttccagaatcatcttctt 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 105910 - 105851
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| |||||||||||||| |||||  |||||||||| || |||||||||||||    
T  105910 tcttcaaatcctgatacatcttcgttgctcctggatgaatacttaaactacttctatgac 105851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 135; Significance: 1e-70; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 112945 - 112743
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||| || |||||||||||||||||||||| |||||||||    
T  112945 catctaaagataccatcatcccagcaggtttctgatgctcaactttcgacttctgacaaattaaacaagaatacacaaattgtgccacatcacgtttcaa 112846  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  112845 cccagaccaccaaaacaacttcttcagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 112746  T
Q  201 ttc 203  Q
    |||    
T  112745 ttc 112743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 15749 - 15928
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||| ||  || |||||||||||||  || ||| |||||||||| |||||||| |  |||||||| ||| ||||||| || | |||||    
T  15749 gcaggtttctgatgctgaacttttgacttctgacaaatcaaacagtaatacacaaactgtgccacgtctcgtttcaacccagaccaccaaaacaacttct 15848  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15849 tcaaatcatgatacatcttagtagctcccggatgaatactcaagctacttctgtgactctcttcaagaatcattttcttc 15928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 135; Significance: 1e-70; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 278287 - 278085
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||||| || || ||||||||||||||||||||||  ||||||||    
T  278287 catctaatgataccatcatatcagcaggtttctgatgttcaatcttcgacttctgacaaaccaaacatgaatacacaaattgtgccacatcgcgtttcaa 278188  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| |||||||||| ||| ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||    
T  278187 tccagaccaccagaatatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaacctacttctatgactctcttcaagaatcattttc 278088  T
Q  201 ttc 203  Q
    |||    
T  278087 ttc 278085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 261180 - 261328
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| ||||  || ||||||||||||   || || | ||||||||| || || || | ||||||||||||  ||||||| || | ||| |    
T  261180 gcaggcttctgatgttcaactttagacttctgacaagtcaaacatgcatacacaaactgagcaacgtcacgtttcaaaccggaccaccaaaacagctttt 261279  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||||    
T  261280 tcaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1263 - 1464
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| ||||| |||||||||||| | |  |||||||||||||||||||| |||||||||| ||| | ||||||||  ||||||||    
T  1263 catctaaaggtaccatcatcccagcgggtttctgatgcccgactttcgacttctgacaaactaaacaggaatacataaactatgccacatctcgtttcaa 1362  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  1363 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttc 1462  T
Q  201 tt 202  Q
    ||    
T  1463 tt 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 8215 - 8416
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| |  |||||||||||||||||||  |||||||||||||| ||||||||||  ||||||||    
T  8215 catctaaaggtaccatcattccggcaggtttctgatgctcgactttcgacttctgacaaactagacaggaatacacaaactgtgccacatctcgtttcaa 8314  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||    
T  8315 accagaccaccagaaaatcttctttaaatcatgatacatcttcgtagctcccggatgaatactcaagctactcctgtgactctcttcaagaatcatcttc 8414  T
Q  201 tt 202  Q
    ||    
T  8415 tt 8416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 132; Significance: 9e-69; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 8246 - 8441
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||| |||||||||   |||| ||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||||||||||| | ||| ||    
T  8246 catctaaaggtaccatcattttagcatgtttctgatgctcgactttcgacttctgacaaactaaacaggaatacacaaactgtgccacatttcttttgaa 8345  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  8346 accagaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcat 8441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 49101 - 49234
Alignment:
Q  70 aatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    |||||||||| ||||||||||  |||||||| | | | |||||||| |||||||||| ||| ||||||||||||||| || || |||||||||||||| |    
T  49101 aatacacaaactgtgccacatcgcgtttcaatctagaacaccagaatatcttctttagatcatgatacatcttcgtatctgccggatgaatactcaagtt 49200  T
Q  170 acttctatgactctcttcaagaatcattttcttc 203  Q
    |||| |||| ||||||||||||||||||||||||    
T  49201 acttttatggctctcttcaagaatcattttcttc 49234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 132; Significance: 9e-69; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 3914 - 3719
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  3914 catctaaagataccatcatcccaacaggtttctgatgctcaactttcgacttctgacaaattaaacaggaatacacaaattgtgccacatcacgtttcaa 3815  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
     ||| ||||||| || | |||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814 tccagaccaccaaaacaacttcttcagatcatgatacattttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 3719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 28829 - 28627
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| || |||||||||||||| |||||||||| |||||||||    
T  28829 catctaaagataccatcataccagcgggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaactgtgccacatcacgtttcaa 28730  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
      || || || | ||||||||||||  ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  28729 tacagacaactataaaatcttctttggatcatgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 28630  T
Q  201 ttc 203  Q
    |||    
T  28629 ttc 28627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 130956 - 131158
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||| |||||||||||||||||| || | |||||||||||||||  || || ||||||||||| | ||| || |  ||||||||    
T  130956 catctaacgataccatcataacagcaggtttctgatgcttaaccatcgacttctgacaaatcaaacaagaatacacaaactttgcaacgtcgcgtttcaa 131055  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||||| ||| |||||| |||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||||||    
T  131056 tccagaccaccaaaacaacttctttagatcatgatacctcttcgtagctcccggatgaatactcaagttgcttctatggctctcttcaagaatcattttc 131155  T
Q  201 ttc 203  Q
    |||    
T  131156 ttc 131158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 59652 - 59806
Alignment:
Q  49 acttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagc 148  Q
    |||||||||||| ||| || | |||| |||||||||||||||  || ||||| ||  ||||||| || | |||||| ||||| |||||||| || |||||    
T  59652 acttctgacaaattaaacacgcatacccaaattgtgccacatgtcgcttcaacccggaccaccaaaataacttcttaaaatcttgatacatttttgtagc 59751  T
Q  149 tcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||| |||||||||||||  ||||||| ||||| ||||| | |||||| ||||||    
T  59752 tcccggatgaatactcaaattacttctgtgactttcttccataatcatcttcttc 59806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 16504 - 16706
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||  || || ||||||||||| |||||||||| |||||||||    
T  16504 catctaaagacaccatcataccagcaggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaactgtgccacatcacgtttcaa 16603  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | ||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16604 tccagaccaccaaaataacttttttagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 16703  T
Q  201 ttc 203  Q
    |||    
T  16704 ttc 16706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 25823 - 26025
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||  ||||||||||||| ||||||||||  ||||||||    
T  25823 catctaacgataccatcatacaagcaggtttctgatgttcaatcttcgacttgtgacaaactaaataggaatacacaaactgtgccacatctcgtttcaa 25922  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||||||| |||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  25923 tccagaccaccagaaaatcatcttcagatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaattattttc 26022  T
Q  201 ttc 203  Q
    |||    
T  26023 ttc 26025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 79951 - 79749
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||||||||||||||| || | ||||||||| ||||||| ||| ||  |||||||||| ||||||||||  ||||||||    
T  79951 catctaacgataccatcataccagcaggtttctgatgttcgatcttcgacttatgacaaaataaacacaaatacacaaactgtgccacatctcgtttcaa 79852  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  79851 tccagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccggttgaatactcaagctacttctatgactctcttcaagaatcattttc 79752  T
Q  201 ttc 203  Q
    |||    
T  79751 ttc 79749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 3223 - 3425
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||||  || || ||||||||||| ||||| |||| |||||||||    
T  3223 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcaatttctgacaaatcaaacaagaatacacaaactgtgcaacatcacgtttcaa 3322  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||||||||| | |||||||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  3323 tccagaccaccagaacaacttctttagatcgtggtacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcattttc 3422  T
Q  201 ttc 203  Q
    |||    
T  3423 ttc 3425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 127; Significance: 9e-66; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 229892 - 230094
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||| || || |||||||||||||||||||||| |||||||||    
T  229892 catctaaagacaccatcataccagcaggtttctgatgctcaattttcgacttctgacaaaccaaacaagaatacacaaattgtgccacatcacgtttcaa 229991  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| |  | ||| || ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||    
T  229992 tccagaccaccaaaccaactttttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactttcttcaagaatcatcttc 230091  T
Q  201 ttc 203  Q
    |||    
T  230092 ttc 230094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 218851 - 218672
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  || |||||||||||||  || ||||||| |||||| |||||||||| ||||||||| ||| ||||||| || | |||||    
T  218851 gcaggtttctgatgctcaacttttgacttctgacaaatcaaacaggaattcacaaactgtgccacatcacgtttcaacccagaccaccaaaacaacttct 218752  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  218751 tcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 218672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6863 - 7065
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||  || || ||||||||||| ||||| || |  ||||||||    
T  6863 catctaaagataccatcataccagcaggtttctgatgttcaaccttcgacttatgacaaatcaaacaagaatacacaaactgtgcaacgtcgcgtttcaa 6962  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || |||||||||| ||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6963 tccagaccaccaaaatatcttctttagatcatgatacatcttcatagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 7062  T
Q  201 ttc 203  Q
    |||    
T  7063 ttc 7065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 545 - 747
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||  || || ||||||||||||||||| ||||   |||||||    
T  545 catctaaagacaccatcataccagcgggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgcaacatcgtgtttcaa 644  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| ||||| ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  645 tccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcccggatgaataatcaagttacttctatgactctcttcaagaatcattttc 744  T
Q  201 ttc 203  Q
    |||    
T  745 ttc 747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 280 - 78
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||| ||||||||| ||||| |||| |||||| |||||||||||||| |||||||||| ||||||||||| ||  ||||||||    
T  280 catctaaggataccatcatactagcaggtttgtgatgttcaatcttcgatttctgacaaactaaacaggaatacaaaaattgtgccatatcgcgtttcaa 181  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
    |||| ||||| ||||||| ||||| | ||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  180 accagaccactagaaaattttcttcagatcatgaaacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaattattttc 81  T
Q  201 ttc 203  Q
    |||    
T  80 ttc 78  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24347 - 24549
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| || |||||||||||||| ||||||||||  ||||||||    
T  24347 catctaaagataccatcataccagcaggtttctgatgttcaatcatcgacttctgacaaaccaaacaggaatacacaaactgtgccacatcgcgtttcaa 24446  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
       | |||||||||| |||||||| | ||| ||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  24447 tttagaccaccagaatatcttcttcagatcatgatacatcttcgtagctcctcgatgaattctcaagctacttctacgactctcttcaataatcattttc 24546  T
Q  201 ttc 203  Q
    |||    
T  24547 ttc 24549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 119; Significance: 5e-61; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19451 - 19653
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||| |||| |||||| ||||||||    
T  19451 catctaaggataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaactgtgtcacattgcgtttcaa 19550  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | |||||||||| || ||||| | ||| |||||||||||||||||| || | |||||||| | ||||||||||||||||||||||||||||||||||    
T  19551 tctagaccaccagaatattttcttcagatcatgatacatcttcgtagctgccgggtgaatacttaggctacttctatgactctcttcaagaatcattttc 19650  T
Q  201 ttc 203  Q
    |||    
T  19651 ttc 19653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 34875 - 35077
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||| |||| |||||| ||||||||    
T  34875 catctaaggataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaactgtgtcacattgcgtttcaa 34974  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | |||||||||| || ||||| | ||| |||||||||||||||||| || | |||||||| | ||||||||||||||||||||||||||||||||||    
T  34975 tctagaccaccagaatattttcttcagatcatgatacatcttcgtagctgccgggtgaatacttaggctacttctatgactctcttcaagaatcattttc 35074  T
Q  201 ttc 203  Q
    |||    
T  35075 ttc 35077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 50281 - 50483
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||  || || |||||| |||| |||||||||| |||||||||    
T  50281 catctaaagacaccatcataccagcaggtttctgatgctcaactttcgacttctggcaaatcaaacaagaatacgcaaactgtgccacatcacgtttcaa 50380  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||| || || | |||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50381 tccagaccagcaaaataacttctttagatcatggtacatcttcgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcattttc 50480  T
Q  201 ttc 203  Q
    |||    
T  50481 ttc 50483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 32210 - 32008
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||||||||| ||||| |||  ||||||||||||| |||||||||| |||||||||    
T  32210 catctaaagataccatcattccagcaggtttctgatgctcaactttcgacttctcacaaattaaataggaatacacaaactgtgccacatcacgtttcaa 32111  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | ||| || | ||| ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||    
T  32110 cccagaccaccaaaacaactttttcacatcatgatacatcttcgtagctcccggatggatactcaagttacttctatgactctcttcaagaatcatcttc 32011  T
Q  201 ttc 203  Q
    |||    
T  32010 ttc 32008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 3271 - 3069
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||| ||||||||| | |||  |||||||||||||||||| || || ||| ||||||| ||||||||||  |||||| |    
T  3271 catctaaggataccatcataccagcgggtttctgacgttcagtcttcgacttctgacaaaccaaacaagaacacacaaactgtgccacatcgcgtttcga 3172  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||||||||| ||||| | ||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  3171 tccagaccaccagaaaattttcttcagatcatgatacattttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttc 3072  T
Q  201 ttc 203  Q
    |||    
T  3071 ttc 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 111; Significance: 3e-56; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12907 - 13109
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||| || ||||| ||||  |||||||     
T  12907 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaattaaacaagaatacacgaactgtgcaacatctcgtttcag 13006  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| || |||| || | |||||||| ||| ||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||||||||    
T  13007 tccagacaaccaaaacaacttctttagatcatgatacatcttcgtagctccagggtgaatactcaagttacttctatgactctcttcaagaatcattttc 13106  T
Q  201 ttc 203  Q
    |||    
T  13107 ttc 13109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6872 - 7071
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||  || || | ||||||||| ||||| ||||  ||||||||    
T  6872 catctaaagacaccatcataccagcaggtttctgatactcaaccttcgatttctgacaaatcaaacaagtatacacaaactgtgcaacatcgcgtttcaa 6971  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||   ||| |  ||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  6972 tccagaccacc---aaaacaactttagatcgtggtacatcttcgtagctcctggatgaatactcaagctacttctatgactctcttcaagaatcattttc 7068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 883 - 836
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctactt 173  Q
    ||||| |||||||| |||||||||||| |||||||||| |||||||||    
T  883 aaatcatgatacattttcgtagctcccggatgaatacttaagctactt 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 23150 - 23204
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  23150 aaatcctgatacatcttagtcgctcctggatgaatactcaaactacttctatgac 23204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7788 - 7586
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |||||  || || ||||||||||| ||||| || |  ||||||||    
T  7788 catctaatgataccatcataccagcaggtttctgatgttcaaccttcgacttctaacaaatcaaacaagaatacacaaactgtgcaacgtcgcgtttcaa 7689  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  7688 tccggaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatggctctcttcaagaatcattttc 7589  T
Q  201 ttc 203  Q
    |||    
T  7588 ttc 7586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 107; Significance: 8e-54; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7221 - 7423
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||  || || ||||||||||||||||| || | |||||||||    
T  7221 catctaacgataccatcataccagcaggtttttgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgcaacgtcacgtttcaa 7320  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
      |  ||||||| || | | |||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||    
T  7321 ttcggaccaccaaaacaacctctttagatcatgatacatcttcgtagctcccagatgaatactcaagttacttctatggatctcttcaagaatcatcttc 7420  T
Q  201 ttc 203  Q
    |||    
T  7421 ttc 7423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 3664 - 3832
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    |||| ||||||||||||| ||| | ||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || | ||||||    
T  3664 caggcttctgatgctcaaccttagtcttctgacaagtcaaacatgcatagacaaactgagcaacatcacgtttcaacccagaccaccaaaacaacttctt 3763  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaat 193  Q
     || || ||||||||||| ||||||||| |||||||||| ||||||||  | ||||| ||||| |||||    
T  3764 caagtcatgatacatctttgtagctcccggatgaatacttaagctactcttgtgactttcttccagaat 3832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6898 - 7100
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||| ||||| || |  | ||||||    
T  6898 catctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatcaagcaagaatacacaaactgtgcaacgtcgcatttcaa 6997  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | ||| |||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| |||    
T  6998 tccggaccaccaaaacaacttttttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatggctctcttcaagaatcatcttc 7097  T
Q  201 ttc 203  Q
    |||    
T  7098 ttc 7100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 6074 - 6272
Alignment:
Q  5 taaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaacca 104  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||   || || ||||||||||||||||| ||||  |||||||| | |    
T  6074 taaagataccatcctaccagcaggtttctgatgctcaaccttcgacttctaacaagtcaaacaagaatacacaaattgtgcaacatcgcgtttcaatcta 6173  T
Q  105 aaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
     ||||| | || | |||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  6174 gaccactaaaacaacttctttagatcgtggtacatcttcatagctcccagatggatactcaagctacttctatgactttcttcaagaatcattttcttc 6272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 4893 - 5082
Alignment:
Q  14 catcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccag 113  Q
    ||||| ||| |||||||||||||||||||  || |||||||||||||  || |||||||||||||| |||||||||| || |||||| ||| |||||||     
T  4893 catcaaacctgcaggtttctgatgctcaacttttgacttctgacaaatcaaacaggaatacacaaactgtgccacatcacatttcaacccagaccaccaa 4992  T
Q  114 aaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    || | |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  4993 aacaacttctttaaatcatgatacatcttcgtagctcccggatgattactcaagctacttttatgactctcttcaagaatcatcttcttc 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1524 - 1322
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||  || || ||||||||||| |||||||||| |||||||||    
T  1524 catctaaagataccatcattcccgcaggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaactgtgccacatcacgtttcaa 1425  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| | ||||| || | ||| || | ||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||  |||||||||    
T  1424 cccagatcaccaaaacaactttttcagatcatgatatatcttcgtagctcccggatgaatactcaagctactcctatgactctcttcaaatatcattttc 1325  T
Q  201 ttc 203  Q
    |||    
T  1324 ttc 1322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7348 - 7146
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||  ||| |||||||||||||||| |  || |||||||||||||| || || ||||| ||||| | |||||||| |||||||||    
T  7348 catctaaagataccatcaacccaacaggtttctgatgctccacttttgacttctgacaaaccaaacatgaatatacaaactatgccacatcacgtttcaa 7249  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | ||||||| || |||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |||    
T  7248 ccgagaccaccaaaacatcttctttagatcatgatacatcttcgtagctcccggatggatactcaagctacttctgtgactctcttcaagaatcatcttc 7149  T
Q  201 ttc 203  Q
    |||    
T  7148 ttc 7146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17434 - 17232
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||||| |||||  ||| ||||||| ||||||||||  || |||||||||||||  || |||||||||||||| |||||||||| |||||||||    
T  17434 catctaaagatagcatcaacccaacaggtttttgatgctcaacttttgacttctgacaaatcaaacaggaatacacaaactgtgccacatcacgtttcaa 17335  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | |||||| ||||| ||||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||| |||    
T  17334 cccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcccggatgaatactcaagttacttttgtgactctcttcaagaatcatcttc 17235  T
Q  201 ttc 203  Q
    |||    
T  17234 ttc 17232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 103; Significance: 2e-51; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19798 - 19596
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||  || || |||||||| || ||||| || |  ||||||||    
T  19798 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacgaactgtgcaacgtcgcgtttcaa 19699  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||||||    
T  19698 tccggaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacatctatggctctcttcaagaatcattttc 19599  T
Q  201 ttc 203  Q
    |||    
T  19598 ttc 19596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 20772 - 20920
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||| ||||  || ||||||||||||   || || | ||| | |||||| || |||| ||||||||||||  ||||||| || | ||| |    
T  20772 gcaggtttctgatgttcaactttagacttctgacaagtcaaacatgcataaataaattgagctacatcacgtttcaaaccggaccaccaaaacagctttt 20871  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| || |||| |||| |||||||||||| ||||||    
T  20872 tcaaatcatgatacatttttgtaggtcccggatgaatactcatgctact 20920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 45458 - 45537
Alignment:
Q  93 cgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    |||||||||||  ||||||  || | |||||| ||||| || ||||| || ||||||||| |||||||||||||||||||    
T  45458 cgtttcaaaccggaccaccgaaacagcttcttcaaatcatggtacatttttgtagctcccggatgaatactcaagctact 45537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 326 - 190
Alignment:
Q  66 caggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactca 165  Q
    |||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||    
T  326 caggaatacacaaactgtgccacatctcgtttcaaaccagaccaccagaaaatcttctttagatcatgatacatcttcgtagctcccgggtgaatactca 227  T
Q  166 agctacttctatgactctcttcaagaatcattttctt 202  Q
    ||||||||||||||||||||||||||||||| |||||    
T  226 agctacttctatgactctcttcaagaatcatcttctt 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 100; Significance: 1e-49; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 203
Target Start/End: Complemental strand, 25963 - 25788
Alignment:
Q  28 gtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaa 127  Q
    |||||||||||||||  || ||||| |||||||  || |||||||||||||| ||||||||||   ||||||| ||| ||||||| || | |||||| ||    
T  25963 gtttctgatgctcaacttttgacttttgacaaatcaaacaggaatacacaaactgtgccacatcgtgtttcaacccagaccaccaaaacaacttcttcaa 25864  T
Q  128 atcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25863 atcgtgatacatcttcgtagctcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttcttc 25788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 149442 - 149590
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||||||||  || ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || | |||||    
T  149442 gcaggcttctgatgctcaacattagacttctgacaagtcaaacatgcatagacaaactgagcaacatcacgtttcaacccagaccaccaaaacagcttct 149541  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||| ||||||||| |||||||||| ||||||||    
T  149542 tcaaatcatgatacatctttgtagctcccggatgaatacttaagctact 149590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 195132 - 194990
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||| ||||    
T  195132 ttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttcttcaaat 195033  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||    
T  195032 cgtgatacatctttgtagctcccggatgaatacttaagctact 194990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 180898 - 180952
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  180898 aaatcatgatacatcttagttgctcctggatgaatactcaaactacttctatgac 180952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 102093 - 102284
Alignment:
Q  12 accatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccacc 111  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||||  ||  ||||||||||||| |||| ||||| | ||||||| ||| ||||||    
T  102093 accatcatcccagcaggtttctgatgctcaactttcgacttctgacaaatcaaataggaatacacaaactgtgacacatcatgtttcaacccagaccacc 102192  T
Q  112 agaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | || | ||| || | ||| |||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  102193 aaaacaactttttcagatcatgatacattttcgtagctcccggatggatactcaagctacttctatgactctcttcaagaatcattttcttc 102284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29794 - 29996
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||| |||||||||||| |||| |||||| ||||||||||  || || ||||||||||| | ||| ||||  ||||||||    
T  29794 catctaaagacaccatcataccagtaggtttctgatggtcaaccttcgatttctgacaaatcaaacaagaatacacaaactctgcaacatcgcgtttcaa 29893  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| || || | || | | |||||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  29894 tccagacgacaaaaacaacctctttagatcgtggtacatcttcgtagctcccggatgaatactcaagttacttctatgactctcttcaagaatcattttc 29993  T
Q  201 ttc 203  Q
    |||    
T  29994 ttc 29996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 28992 - 29080
Alignment:
Q  87 acattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttct 175  Q
    |||| ||||||||| ||| ||||||| || |  ||||| || || ||||||||||| ||||||||  |||||||||| |||||||||||    
T  28992 acatcacgtttcaacccagaccaccaaaacaatttcttcaagtcatgatacatctttgtagctcctggatgaatacttaagctacttct 29080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 1525 - 1727
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||  || || |||||||||||  |||| |||| ||| |||||    
T  1525 catctaaatataccatcataccagcaggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaaccgtgcaacatcacgcttcaa 1624  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| |||| || || | | |||| ||||| || | |||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||    
T  1625 tccagaccatcaaaacaacatcttcaaatcatggtgcatcttcgtagctcccggatgaatactcaaactacttcaatgactctcttcaagaatcatcttc 1724  T
Q  201 ttc 203  Q
    |||    
T  1725 ttc 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19459 - 19257
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||| ||||  || || | |||||||||  |||| || |  ||||||||    
T  19459 catctaacgataccaacatatcagcaggtttctgatgctcaatcttcgacttctggcaaatcaaacaagcatacacaaaccgtgcaacgtcgcgtttcaa 19360  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||  ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  19359 tccggaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatggctctcttcaagaatcattttc 19260  T
Q  201 ttc 203  Q
    |||    
T  19259 ttc 19257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 14576 - 14466
Alignment:
Q  93 cgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaa 192  Q
    |||||||| ||  ||||||| || | |||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  14576 cgtttcaatccggaccaccaaaacaacttctttagatcatgatacatcttcgtagctcccggatgaatactcaagttacttctatggctctcttcaagaa 14477  T
Q  193 tcattttcttc 203  Q
    |||||||||||    
T  14476 tcattttcttc 14466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 8544 - 8342
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||||||||||||||| || |||||||||||||||||||  |||||||||| |||||  || || |||||||| || |||||||||| |||||||||    
T  8544 catctaaagataccatcattcccgcaggtttctgatgctcaactttcgacttctaacaaatcaaacatgaatacacgaactgtgccacatcacgtttcaa 8445  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     ||| ||||||| || | ||| || ||||| |||||||||| |||||||||| |||| ||||| |||| |||||||||| |||||||||||||||| |||    
T  8444 cccagaccaccaaaacaactttttcaaatcatgatacatctgcgtagctcccggatggatacttaagccacttctatgattctcttcaagaatcatcttc 8345  T
Q  201 ttc 203  Q
    |||    
T  8344 ttc 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 94; Significance: 4e-46; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 4745 - 4922
Alignment:
Q  26 aggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttcttt 125  Q
    ||||||||||||||| |  || |||||||||||||  || |||||||||||||| | |||||||| ||||||||| ||| || |||| || | ||||||     
T  4745 aggtttctgatgctccacttttgacttctgacaaatcaaacaggaatacacaaactatgccacatcacgtttcaacccagacgaccaaaacaacttcttc 4844  T
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4845 aaatcatgatacatctttgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttcttc 4922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 11875 - 12052
Alignment:
Q  26 aggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttcttt 125  Q
    ||||||||||||||| |  || |||||||||||||  || |||||||||||||| | |||||||| ||||||||| ||| || |||| || | ||||||     
T  11875 aggtttctgatgctccacttttgacttctgacaaatcaaacaggaatacacaaactatgccacatcacgtttcaacccagacgaccaaaacaacttcttc 11974  T
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11975 aaatcatgatacatctttgtagctcccggatgaatactcaagctacttctatgactctcttcaagaatcatcttcttc 12052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 116340 - 116160
Alignment:
Q  23 agcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttc 122  Q
    ||||||||||||||||||||  || ||||||||| |||  || || ||||||||||| || ||||||| ||||||||| ||| ||||||| || | |||     
T  116340 agcaggtttctgatgctcaacttttgacttctgagaaatcaaacatgaatacacaaactgcgccacatcacgtttcaacccagaccaccaaaacaacttt 116241  T
Q  123 tttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    || ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  116240 ttcaaatcatgatacatcttcgtagctcccggatgaatactcaagctacttctgtgactctcttcaagaatcatcttcttc 116160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 17553 - 17732
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  || ||||| |||||||  || |||||||||||||| ||||||||||  | |||||| | | ||||||| || | |||||    
T  17553 gcaggtttctgatgctcaacttttgacttttgacaaatcaaacaggaatacacaaactgtgccacatcgcatttcaacctagaccaccaaaacaacttct 17652  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | | ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17653 tcagatcatgatacatcttcgtagctcccggatgaatacttaagctacttctatgactctcttcaagaatcattttcttc 17732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 1742 - 1944
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||| |||| |||||| |||| |||||  ||||||||||||||||  || |  |||||||||||||||||||||| |||||||||    
T  1742 catctaaagacaccatcattccagtaggtttttgatcctcaactttcgacttctgacaaatcaaaccagaatacacaaattgtgccacatcacgtttcaa 1841  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttc 200  Q
     | | | ||||| || | ||| || ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||  |||||||| |||    
T  1842 cctagatcaccaaaataactttttcaaatcatgatacattttcgtagctcccggatgaatactcaagctacttctatgactctctttgagaatcatcttc 1941  T
Q  201 ttc 203  Q
    |||    
T  1942 ttc 1944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 4012 - 4190
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  || |||||||||||||  || || ||||| | |||||||||||||| ||||||||| ||| ||||||| || | |||||    
T  4012 gcaggtttctgatgctcaacttttgacttctgacaaatcaaacatgaataaataaattgtgccacatcacgtttcaacccagaccaccaaaacaacttct 4111  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    | ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| | |||||| |||||    
T  4112 tcaaatcgtgatacatcttggtagatcccaaatgaatactcaagctacttctatgactctcttccaaaatcatcttctt 4190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 202
Target Start/End: Complemental strand, 25152 - 24975
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    ||||||||||||||||||  || |||||||||||||  || || |||||||||||||||||||||| ||||||||| ||| ||||||| || | ||||||    
T  25152 caggtttctgatgctcaacttttgacttctgacaaatcaaacatgaatacacaaattgtgccacatcacgtttcaacccagaccaccaaaacaacttctt 25053  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
     ||||| ||||||||||| |||||||||  ||||||||||||||||| ||| | ||| ||||||||||||||||||||    
T  25052 caaatcatgatacatctttgtagctccctaatgaatactcaagctacgtctgttactttcttcaagaatcattttctt 24975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 9842 - 10021
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||| |||||||||| ||| |||||||||||||  || || ||||||||||| | |||||||| ||||||||  ||| ||||||| || | ||| |    
T  9842 gcaggtttttgatgctcaacctttgacttctgacaaatcaaacaagaatacacaaactatgccacatcacgtttcagtccagaccaccaaaacaactttt 9941  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  9942 tcaaatcatgatacatcttcgtagctcctggatgaatgctcaagctacttctatgactctcttcaagaatcatcttcttc 10021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 390656 - 390489
Alignment:
Q  2 atctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaa 101  Q
    |||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||  || || ||||||||||| ||||| |||| |||||||||     
T  390656 atctaaagataccatcattctagcaggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaactgtgctacatcacgtttcaat 390557  T
Q  102 ccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    ||| ||||||| || | ||| || ||||| ||||||||||||||||||||| ||||||||||||||||    
T  390556 ccagaccaccaaaataactttttcaaatcatgatacatcttcgtagctcccggatgaatactcaagct 390489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 14512 - 14334
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    |||||||||||| |||||  || ||||||| |||||  || || ||||||||||| |||| ||||| | ||||||| ||| ||||||| || | ||||||    
T  14512 caggtttctgatactcaacttttgacttctaacaaatcaaacatgaatacacaaactgtgtcacatcatgtttcaacccagaccaccaaaacaacttctt 14413  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
     ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  14412 caaatcatgatacatcttcgtagctccctgatgaatactcaagctacttctgtgactctcttcaagaatcatcttcttc 14334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 49 - 203
Target Start/End: Complemental strand, 26353 - 26199
Alignment:
Q  49 acttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagc 148  Q
    ||||||||||||  || || ||||| ||||| |||||||||| ||||||||| ||| ||||||| || | ||| || ||||| |||||||||||||||||    
T  26353 acttctgacaaatcaaacaagaatatacaaactgtgccacatcacgtttcaacccagaccaccaaaataactttttcaaatcatgatacatcttcgtagc 26254  T
Q  149 tcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26253 tcccggatgaatactcaagctatttctatgactctcttcaagaatcattttcttc 26199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 87; Significance: 7e-42; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 2811 - 2965
Alignment:
Q  49 acttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagc 148  Q
    |||| |||||||  || |||||||||||||| ||||||||||  |||||||| ||| ||||||| || | |||||| ||||| ||||||||||| |||||    
T  2811 acttttgacaaatcaaacaggaatacacaaactgtgccacatcgcgtttcaacccagaccaccaaaacaacttcttcaaatcatgatacatctttgtagc 2910  T
Q  149 tcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2911 tcccgggtgaatactcaagctacttctatgactctcttcaagaatcattttcttc 2965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 41767 - 41596
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||| ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  41767 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 41668  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  41667 tcaaatcatggtacatttttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 41596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 46832 - 46685
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    |||| |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | ||||||    
T  46832 caggcttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttctt 46733  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
     ||||| |||| ||| || ||||||||  |||||||||||||||||||    
T  46732 caaatcatgattcatttttgtagctcctggatgaatactcaagctact 46685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 202
Target Start/End: Original strand, 1777 - 1958
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    ||||||||||||||||||||||  || |||||||||||||  || || ||||||||||| |||| ||||| ||||||||| | | ||||||| || | ||    
T  1777 ccagcaggtttctgatgctcaacttttgacttctgacaaatcaaacatgaatacacaaactgtgtcacatcacgtttcaacctagaccaccaaaacagct 1876  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttctt 202  Q
    |||| ||||| |||||||||||  |||||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  1877 tcttcaaatcatgatacatctttatagctcccggatgaatactcaagctacttctgtgactctcttcgagaatcatcttctt 1958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 2114 - 2320
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| |||||||||||||||||||||||| |||||  |||||||||||||||||  || || ||||||||||| ||||| || |  | ||||||    
T  2114 catctaaagacaccatcataccagcaggtttctgacgctcatccttcgacttctgacaaataaaacaagaatacacaaactgtgcaacgtcgcatttcaa 2213  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttc----tatgactctcttcaagaatcat 196  Q
     ||| ||||||| || | |||||||| ||| || |||||||||| ||||||| |||||||||||||| ||||||    ||||||||| ||||||||||||    
T  2214 tccagaccaccaaaacaacttctttagatcatgctacatcttcggagctcccggatgaatactcaagttacttctatatatgactctattcaagaatcat 2313  T
Q  197 tttcttc 203  Q
    |||||||    
T  2314 tttcttc 2320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 18646 - 18470
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaa-accaccagaaaatcttc 122  Q
    |||||||||||||||||||  || |||||  ||||||  || |||||||||||||| ||||||||||  |     ||||||| ||||||| || | ||||    
T  18646 gcaggtttctgatgctcaacttttgactttggacaaatcaaacaggaatacacaaactgtgccacatcgca----aaaccaagaccaccaaaacaacttc 18551  T
Q  123 tttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18550 ttcaaatcatgatacatcttcgtagctcccaggtgaatactcaagctacttctatgactctcttcaagaatcattttcttc 18470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 4742 - 4608
Alignment:
Q  69 gaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagc 168  Q
    ||||||||||| ||||||||||  |||||||| ||| ||||||| || |||||||||| ||| ||||||||||||||||||||| | |||||||||||||    
T  4742 gaatacacaaactgtgccacatcgcgtttcaatccagaccaccaaaatatcttctttagatcatgatacatcttcgtagctcccgggtgaatactcaagc 4643  T
Q  169 tacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||||||||| |||||||||||||||| |||||    
T  4642 tacttctatgaccctcttcaagaatcattatcttc 4608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 2318 - 2491
Alignment:
Q  3 tctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaac 102  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||  || || ||||||||||| ||||||||||  ||||| || |    
T  2318 tctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttttgacaaatcaaacaagaatacacaaactgtgccacatcccgttttaatc 2417  T
Q  103 caaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttcta 176  Q
    || ||||||| || |  ||||| | ||| ||||||||||||||||||||| ||| |||||| ||||||||||||    
T  2418 cagaccaccaaaatagtttcttcagatcatgatacatcttcgtagctcccggatcaatacttaagctacttcta 2491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 11631 - 11452
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  || ||||| |||||||  || |||||||||||||||||||||||||||| |||||| | | ||||||| || | | |||    
T  11631 gcaggtttctgatgctcaacttttgacttttgacaaagcaaacaggaatacacaaattgtgccacattacttttcaacctagaccaccaaaacaacctct 11532  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||  |||||||||||  |||||||| |||| ||||||||||||||||| |||||||||| |||| |||| ||||||    
T  11531 tcaaataatgatacatctttctagctcccggatggatactcaagctacttctgtgactctctttaagagtcatcttcttc 11452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 17823 - 17644
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||||||||  || ||||| |||||||  || |||||||||||||||||||||||||||| |||||| | | ||||||| || | | |||    
T  17823 gcaggtttctgatgctcaacttttgacttttgacaaagcaaacaggaatacacaaattgtgccacattacttttcaacctagaccaccaaaacaacctct 17724  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    | ||||  |||||||||||  |||||||| |||| ||||||||||||||||| |||||||||| |||| |||| ||||||    
T  17723 tcaaataatgatacatctttctagctcccggatggatactcaagctacttctgtgactctctttaagagtcatcttcttc 17644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15209 - 15298
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacat 90  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  15209 catctaaagataccatcctaccagcaggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaactgtgccacat 15298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1469 - 1558
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacat 90  Q
    ||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||    
T  1469 catctaaaggtaccatcattccagcaggtttctgatgctcaactttcgacttctgacaaactaaacaggaatacacaaactgtgccacat 1558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 151 - 1
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||  | ||||||||||| ||||| || |  ||||||||    
T  151 catctaatgataccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaatcaaataagaatacacaaactgtgcaacgtcgcgtttcaa 52  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcc 151  Q
     ||  ||||||| || | |||||||| ||| ||||||||||||||||||||    
T  51 tccggaccaccaaaataacttctttagatcatgatacatcttcgtagctcc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 63; Significance: 1e-27; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14888 - 15034
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || | ||||||||| ||||| || |  ||||||||    
T  14888 catctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctaacaaatcaaacaagcatacacaaactgtgcaacgtcgcgtttcaa 14987  T
Q  101 accaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtag 147  Q
     ||  ||||||| |||| |||||||| ||| ||||| ||||||||||    
T  14988 tccggaccaccaaaaaaacttctttagatcatgatagatcttcgtag 15034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18312 - 18234
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaa 79  Q
    ||||||||||||| ||||| ||||||| |||||||||||||   ||||||||||||||||  || ||||||||||||||    
T  18312 catctaaagatacaatcatcccagcagatttctgatgctcagctttcgacttctgacaaatcaaacaggaatacacaaa 18234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 32283 - 32431
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaa-atcttct 123  Q
    |||| ||||||||||||| ||| ||||||| ||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| ||| |  ||||    
T  32283 caggattctgatgctcaaccttagacttctaacaagtcaaacatgcatagacaaactgagcaacatcacgtttcaacccagaccaccaaaaacagtttct 32382  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || || |||||||| || ||||||||| |||||||||| ||||||||    
T  32383 tcaagtcatgatacatttttgtagctcccggatgaatacttaagctact 32431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 10355 - 10271
Alignment:
Q  119 cttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||| ||||| ||||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  10355 cttcttcaaatcatgatacatctttgtagctcccggatgtatactcaagctacttctgtgactctcttcaagaatcattttcttc 10271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 5017 - 4854
Alignment:
Q  33 tgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgt 132  Q
    ||||| |||| ||||||||||||||||| ||| || | ||||||||||||||| ||||  || || || ||  ||||||| || | |||||| |||||||    
T  5017 tgatgttcaaccttcgacttctgacaaattaaacatgcatacacaaattgtgcaacatctcgctttaacccggaccaccaaaataacttcttcaaatcgt 4918  T
Q  133 gatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    ||||||| || ||||||||| |||||||||||||  ||||||| ||||| ||||| ||||||||    
T  4917 gatacatttttgtagctcccggatgaatactcaaattacttctgtgactttcttccagaatcat 4854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 60; Significance: 8e-26; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10166 - 10277
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    ||||||| || |||||||||||||||||||||||| |||||| |||||| ||||||||||  || || ||||||||||| |||||||||| |||||||||    
T  10166 catctaaggacaccatcataccagcaggtttctgaggctcaaccttcgatttctgacaaatcaaacaagaatacacaaaatgtgccacatcacgtttcaa 10265  T
Q  101 accaaaccacca 112  Q
     ||| |||||||    
T  10266 cccagaccacca 10277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 2717 - 2616
Alignment:
Q  71 atacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    |||||||||||| || |||| ||| ||||||||  ||||| | || | ||| || ||||| ||||||||||||||||||||| |||||||||||||||||    
T  2717 atacacaaattgagcaacatcacgcttcaaaccggaccacgaaaacagctttttcaaatcatgatacatcttcgtagctcccggatgaatactcaagcta 2618  T
Q  171 ct 172  Q
    ||    
T  2617 ct 2616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 28097 - 28245
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | |||||||||||| || |||| ||||||||| ||| ||||||| || | |||||    
T  28097 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcatacacaaattgagcaacatcacgtttcaacccagaccaccaaaacagcttct 28196  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | || ||||||||||| || ||||||||| |||||||||| ||||||||    
T  28197 tcaagtcgtgatacatttttgtagctcccggatgaatacttaagctact 28245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 57; Significance: 5e-24; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 57281 - 57133
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||| |||   ||||| | ||||||||| || || |||| ||| ||||||||  ||||||| || | ||| |    
T  57281 gcaggcttctgatgctcaaccttagacttctggcaagtcaagcatgcatacacaaaatgagcgacatcacgcttcaaaccggaccaccaaaacaactttt 57182  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||| || |||||||||||||||||| |||||||||||||||||||    
T  57181 ttaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 57133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 48468 - 48305
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| |||  |||||||||||   || || | ||| ||||| || || |||| | ||||||| | | ||||||| || | |||||    
T  48468 gcaggcttctgatgctcaaccttatacttctgacaagtcaaacatgcataaacaaactgagcaacatcaggtttcaacctagaccaccaaaacaacttct 48369  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | || || ||||||||||| |||||||| ||||||||||| |||||||| ||||| || |||||    
T  48368 tcaagtcatgatacatctttgtagctcctagatgaatacttaagctactcctatggctttcttc 48305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 187
Target Start/End: Complemental strand, 490 - 333
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    |||||||| |||| ||| |||||||||||||  || || | ||| ||||| ||||| || | ||||||||||||  ||||||| || |  ||||| || |    
T  490 ttctgatgttcaaccttagacttctgacaaatcaaacatgcatatacaaactgtgcaacgtcacgtttcaaaccggaccaccaaaataatttcttcaagt 391  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | ||||||||||| ||||||||| |||||||||| ||||||||||||||||| |||||    
T  390 catgatacatctttgtagctcccggatgaatacttaagctacttctatgactttcttc 333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 54; Significance: 3e-22; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 33111 - 32966
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    |||||||||||||| |||| ||| |||||||| |||   || || | |||||||||||| || |||| ||| |||||||||  |||||| || | ||| |    
T  33111 gcaggtttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaattgagcaacatcacgcttcaaaccaggccaccaaaacagctttt 33012  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||    
T  33011 tcaaatcgtgatacatcttcgtagctcccggatggatactcaagct 32966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 56334 - 56186
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| ||||  || ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  56334 gcaggcttctgatgttcaactttagacttctgacaagtcaaacatgcatacacaaactgagcaacttcacgcttcaaaccggaccaccaaaacagcttct 56235  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||| ||||||| | |||||||||||||||||||    
T  56234 tcaaatcatggtacatctttgtagctctcggatgaatactcaagctact 56186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 41232 - 41286
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  41232 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 41286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 2461 - 2608
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    |||| ||||||||||||| ||| ||||||||||||   || || | ||||||||| || || |||| || |||||||||| ||||||| || | ||||||    
T  2461 caggcttctgatgctcaaccttagacttctgacaagtcaaacacgcatacacaaactgagcaacatcacttttcaaaccagaccaccaaaacagcttctt 2560  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
     ||||| |||||||| |||||||||||| |||||||| | ||||||||    
T  2561 caaatcatgatacattttcgtagctcccggatgaataattaagctact 2608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 1406 - 1243
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  1406 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatttct 1307  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | || || ||||||||||| |||||||| ||||||||||| ||||||||||| ||||| |||||    
T  1306 tcaagtcatgatacatctttgtagctcctagatgaatacttaagctacttctgtgactttcttc 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 39468 - 39357
Alignment:
Q  1 catctaaagataccatcataccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||  || || |||||||||||  |||| ||||   |||||||    
T  39468 catctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaaccgtgcaacatcgtgtttcaa 39369  T
Q  101 accaaaccacca 112  Q
     ||| |||||||    
T  39368 tccagaccacca 39357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 34060 - 34205
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   || || | ||| | |||||| || |||| ||| ||||||||| ||||||| |||| ||| |    
T  34060 gcaggattctgatgttcaaccttagacttctggcaagtcaaacatgcataaaaaaattgagcaacatcacgcttcaaaccagaccaccaaaaaagctttt 34159  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagct 169  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||    
T  34160 tcaaatcgtgatacatcttcgtagctcccggatggatactcaagct 34205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 85955 - 85811
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||| || | || |||||||||||||||||  || ||||| ||  ||||||| || | ||    
T  85955 ccagcaggtttctgatgttcaactttcgacttctgacaaattaaacacgcatgcacaaattgtgccacatctcgcttcaacccggaccacca-aataact 85857  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaa 166  Q
    |||| ||||| |||||||| || ||||||||| ||| |||||||||    
T  85856 tcttcaaatcatgatacatttttgtagctcccggataaatactcaa 85811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 736 - 884
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  736 gcaggcttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaatagcttct 835  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| |||||||||||| |||||||||||||||||||    
T  836 tcaaatcatgatacattttcgtagctcccggatgaatactcaagctact 884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 3048 - 3220
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  3048 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatttct 3147  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    | ||||| |||||||| || ||||||||| |||||||||| ||||||||| | ||||  ||||| ||||||||    
T  3148 tcaaatcatgatacatttttgtagctcccggatgaatacttaagctacttttgtgacattcttccagaatcat 3220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 12220 - 12072
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||| |||||||| ||| |||||||| |||   ||||| | ||||||||| || || |||| ||  |||||||| |||||||| || | ||| |    
T  12220 gcaggcttctaatgctcaaccttagacttctggcaagtcaagcatgcatacacaaaatgagcgacatcacaattcaaaccgaaccaccaaaacagctttt 12121  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||||    
T  12120 tcaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 12072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 39218 - 39158
Alignment:
Q  143 cgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatcattttcttc 203  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  39218 cgtagctcccggatgaatactcaagttactcctatgactctcttcaagaatcattttcttc 39158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 51297 - 51134
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaa-aatcttc 122  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || ||||| |    
T  51297 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatct-c 51199  T
Q  123 tttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    || ||||| ||||||||||| |||||||| ||||||||||| ||| ||||||| ||||| |||||    
T  51198 ttcaaatcatgatacatctttgtagctcctagatgaatacttaagttacttctgtgactttcttc 51134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 5622 - 5793
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  5622 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcatagacaaactgagcaacatcacgtttcaacccagaccaccaaaacaatttct 5721  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| |||||||| || ||||||||| |||||||||| ||||||||  | ||||| ||||| |||||||    
T  5722 tcaaatcatgatacatttttgtagctcccggatgaatacttaagctactcttgtgactttcttccagaatca 5793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 27396 - 27559
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||  ||||||| || |  ||||    
T  27396 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaatccggaccaccaaaacaatttct 27495  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | || || ||||||||||| ||||||||| |||||||||| ||||||||||| ||||| |||||    
T  27496 tcaagtcatgatacatctttgtagctcccggatgaatacttaagctacttctgtgactttcttc 27559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 25293 - 25151
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || |||| ||||||||| ||| ||||||| || | |||||| ||||    
T  25293 ttctgatgttcaaccttagacttctgacaagtcaaacacgcatacacaaactgagcaacatcacgtttcaacccagaccaccaaaacagcttcttcaaat 25194  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    |  ||||||| |||||||||||| |||||||||| ||||||||    
T  25193 caggatacattttcgtagctcccggatgaatacttaagctact 25151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 3629 - 3771
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| ||||||||||||   || || | ||||||||| || || |||| ||||||||| ||| ||||| | || | |||||| ||||    
T  3629 ttctgatgctcaaccttagacttctgacaagtcaaacacgcatacacaaactgagcaacatcacgtttcaacccagaccactaaaacagcttcttcaaat 3728  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | |||||||| |||||||||||  |||||||||| ||||||||    
T  3729 catgatacattttcgtagctcctggatgaatacttaagctact 3771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 22813 - 22664
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||  ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || | ||    
T  22813 ccagcagtcttctgatgctcaaccttagacttctgacaagtcaaacatgcatagacaaactgagcaacatcacgtttcaacccagaccaccaaaacagct 22714  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagcta 170  Q
    |||| ||||| |||||||| || ||||||||| |||||||||| ||||||    
T  22713 tcttcaaatcatgatacatttttgtagctcccggatgaatacttaagcta 22664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 1114 - 949
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaat 129  Q
    ||||||||||||| ||| ||||||||||||   || || | ||||||||| || || |||| ||||||||| ||| ||||||| || | |||||| || |    
T  1114 ttctgatgctcaaccttagacttctgacaagtcaaacacgcatacacaaactgagcaacatcacgtttcaacccagaccaccaaaacaacttcttcaagt 1015  T
Q  130 cgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | |||||||| || ||||||||| | ||||||||| |||||||  | ||||| ||||| |||||||    
T  1014 catgatacatttttgtagctcccgggtgaatactctagctactcttgtgactttcttctagaatca 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 6085 - 6233
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||| |||   ||||| | ||||||||| || || ||||  || |||||||   ||||||| || | ||| |    
T  6085 gcaggcttctgatgctcaaccttagacttctggcaagtcaagcatgcatacacaaaatgagcgacatctcgcttcaaactggaccaccaaaatagctttt 6184  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||||    
T  6185 tcaaatcatggtacatcttcgtagctcccggatgaatactcaagctact 6233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 45; Significance: 8e-17; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 11491 - 11343
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||| ||||||   || || | ||||||||| || || |||| ||| ||||||||  ||||||| || | |||||    
T  11491 gcaggcttctgatgttcaaccttagacttttgacaagtcaaacatgcatacacaaaatgagcgacatcacgcttcaaaccggaccaccaaaacagcttct 11392  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| |||||||||||| |||||||||| ||||||||    
T  11391 tcaaatcatgatacattttcgtagctcccggatgaatacttaagctact 11343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 15261 - 15113
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||| ||||||   || || | ||||||||| || || |||| ||| ||||||||  ||||||| || | |||||    
T  15261 gcaggcttctgatgttcaaccttagacttttgacaagtcaaacatgcatacacaaaatgagcgacatcacgcttcaaaccggaccaccaaaacagcttct 15162  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| |||||||||||| |||||||||| ||||||||    
T  15161 tcaaatcatgatacattttcgtagctcccggatgaatacttaagctact 15113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 20861 - 21003
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaa-ctaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaa 128  Q
    ||||||||||||| ||| ||||||||||||  |||| || | |||||| || || || |||| ||||||||| ||| || |||| || | |||||| |||    
T  20861 ttctgatgctcaaccttagacttctgacaagtctaa-cacgcatacaccaactgagcaacatcacgtttcaacccagacaaccaaaatagcttcttcaaa 20959  T
Q  129 tcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    || |||||||| |||||||||||| |||||||||| ||||||||    
T  20960 tcatgatacattttcgtagctcccggatgaatacttaagctact 21003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 41789 - 41937
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  41789 gcaggcttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 41888  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| ||||||||||| ||||||||| |||||||||| ||||||||    
T  41889 tcaaatcatgatacatctttgtagctcccggatgaatacttaagctact 41937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 20875 - 20727
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||| ||||| ||| ||||||| |||| |||||    
T  20875 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacacgcatagacaaactgagcaacatcacgcttcaacccagaccaccaaaaaagcttct 20776  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | |||||  |||| ||||| ||||||||| |||||||||| ||||||||    
T  20775 tcaaatcaagatagatctttgtagctcccggatgaatacttaagctact 20727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 45; Significance: 8e-17; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 51546 - 51466
Alignment:
Q  92 acgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||| ||| ||||||| || | |||||||||||| |||||||| |||||||||| | |||||||||||||||||||    
T  51546 acgtttcaacccagaccaccaaaacagcttctttaaatcatgatacattttcgtagctcgcggatgaatactcaagctact 51466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 60580 - 60500
Alignment:
Q  92 acgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||| ||| ||||||| || | |||||||||||| |||||||| |||||||||| | |||||||||||||||||||    
T  60580 acgtttcaacccagaccaccaaaacagcttctttaaatcatgatacattttcgtagctcgcggatgaatactcaagctact 60500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 66968 - 66888
Alignment:
Q  92 acgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||| ||| ||||||| || | |||||||||||| |||||||| |||||||||| | |||||||||||||||||||    
T  66968 acgtttcaacccagaccaccaaaacagcttctttaaatcatgatacattttcgtagctcgcggatgaatactcaagctact 66888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 8e-17; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 4387 - 4239
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| || ||||| |||| ||| ||||||||||||   || || | |||||||||||| || || | ||| ||||||||  ||||||| || | |||||    
T  4387 gcaggcttttgatgttcaaccttagacttctgacaagtcaaacacgcatacacaaattgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 4288  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||| ||||||||||| |||||||||  ||||||||| ||||||||    
T  4287 ttaaatcatgatacatctttgtagctcccgaatgaatacttaagctact 4239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 13335 - 13187
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||| ||||||   || || | ||||||||| || || |||| ||| ||||||||  ||||||| || |  ||||    
T  13335 gcaggcttctgatgctcaaccttagacttgtgacaagtcaaacatgcatacacaaactgagcaacatcacgcttcaaaccggaccaccaaaacagtttct 13236  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||| ||||||||| |||||||||||||||||||    
T  13235 tcaaatcatggtacatctttgtagctcccggatgaatactcaagctact 13187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 68249 - 68405
Alignment:
Q  31 tctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatc 130  Q
    |||||||||||| ||| ||||||||||||   || || | ||||||||| || || ||||  |  ||||||||| ||||| | || | |||||| |||||    
T  68249 tctgatgctcaaccttagacttctgacaagtcaaacacgcatacacaaactgagcgacatccctcttcaaaccagaccacaaaaacaacttcttcaaatc 68348  T
Q  131 gtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
     |||||||| || ||||||||| |||||||||||||| ||||  ||||||| |||||    
T  68349 atgatacatttttgtagctcccggatgaatactcaagttactcttatgactttcttc 68405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 7579 - 7408
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  7579 gcaggcttctgatgctcaaccttagacttctgacaactcaagcaagcataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 7480  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| ||||||||||| ||||| | | | ||||||||||| |||||  | |||||||||||||||||||    
T  7479 tcaaatcatgatacatctttgtagccctcgggtgaatactcaacctactcttgtgactctcttcaagaatca 7408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 827 - 898
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaag 167  Q
    ||||||||| ||||||| || | |||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  827 ttcaaaccagaccaccaaaacaacttcttcaaatcatgatacatcttcgtagctcccggatgaatactcaag 898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 741 - 892
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| || || || || |||| ||||||||| ||||||||||| || |  ||||    
T  741 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacgaactgagcaacatcacgtttcaacccaaaccaccaaaacaatttct 840  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttct 175  Q
    | || || ||||||||||| ||||||||  |||||||||| |||||||||||    
T  841 tcaagtcatgatacatctttgtagctcctggatgaatacttaagctacttct 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 10665 - 10836
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||| ||||   || || | ||| ||||| || || |||| ||||||||| | | ||||||| || |  ||||    
T  10665 gcaggcttctgatgctcaaccttagacttctaacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacctagaccaccaaaacagtttct 10764  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | || || ||||||||||| ||||||||| |||||||||| | ||||||||| ||||| ||||| |||||||    
T  10765 tcaagtcatgatacatctttgtagctcccggatgaatacttaggctacttctgtgactttcttctagaatca 10836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 5302 - 5453
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| || |  ||||    
T  5302 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaacagtttct 5401  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttct 175  Q
    | || || ||||||||||| ||||||||  |||||||||| |||||||||||    
T  5402 tcaagtcatgatacatctttgtagctcctggatgaatacttaagctacttct 5453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 4886 - 4723
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| ||||  || ||||||||||||   || || | ||||||||| || || || | ||||||||||||  ||||||| || | |||||    
T  4886 gcaggcttctgatgttcaactttagacttctgacaagtcaaacatgcatacacaaactgagcaacgtcacgtttcaaaccggaccaccaaaacagcttct 4787  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | ||||| || ||||| ||||||||| || |||||||||||||||||||  ||||||| |||||    
T  4786 tcaaatcatggtacattttcgtagcttccggatgaatactcaagctactcttatgactttcttc 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 6417 - 6319
Alignment:
Q  77 aaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttct 175  Q
    ||||||||| |||| ||||||||||||  ||||||| || |  ||||| || || ||||||||||| ||||||||| |||||||||| |||||||||||    
T  6417 aaattgtgcaacatcacgtttcaaaccggaccaccaaaacaatttcttcaagtcatgatacatctttgtagctcccggatgaatacttaagctacttct 6319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 10245 - 10079
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||| |||||||| ||||  || || |||||||||   || || | ||| ||||| ||||| |||| ||||||||||||  ||||||| || |  |    
T  10245 ccagcaggcttctgatgttcaactttagatttctgacaagtcaaacatgcatatacaaactgtgcaacatcacgtttcaaaccggaccaccaaaacaatt 10146  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    |||| || || |||||||||||  |||||||| |||||||||| ||||||||||| ||||| |||||    
T  10145 tcttcaagtcatgatacatctttttagctccctgatgaatacttaagctacttctgtgactttcttc 10079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 6672 - 6524
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  6672 gcaggcttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 6573  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||| ||  |||||||||||| |||||||||||||||||||    
T  6572 tcaaatcatgatgcactttcgtagctcccggatgaatactcaagctact 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 2789 - 2641
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||| ||| |||| ||| ||||||||||||   || || | |||||| || || || |||| ||| ||||||||  ||||||| || | |||||    
T  2789 gcaggcttcttatgttcaaccttagacttctgacaagtcaaacatgcatacacgaaatgagcgacatcacgcttcaaaccggaccaccaaaacaacttct 2690  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| |||||||||||  |||||||||||||||||||    
T  2689 tcaaatcatgatacattttcgtagctcctggatgaatactcaagctact 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 7932 - 8080
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||| ||   || || | ||||||||| || || || | ||| |||||||   ||||||| || | ||| |    
T  7932 gcaggcttctgatgttcaaccttagacttctgataagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaactggaccaccaaaacaacttat 8031  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  8032 tcaaatcatgatacattttcgtagctcccagatgaatactcaagctact 8080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 40610 - 40758
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| || |||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| ||||||||| ||| ||||||| ||||  ||||    
T  40610 gcaggcttttgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcacgtttcaacccagaccaccaaaaaaatttct 40709  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || |||||||| ||||||| | |||||||||| ||||||||    
T  40710 tcaaatcatggtacatctttgtagctctcggatgaatacttaagctact 40758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 323648 - 323724
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||  ||||||| || | |||||| ||||| |||||||| |||||||||||| |||||||||||||||||||    
T  323648 ttcaaaccggaccaccaaaacagcttcttcaaatcatgatacattttcgtagctcccggatgaatactcaagctact 323724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 202905 - 202739
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||||| |||||||| ||||  || || ||||||||||  || ||   ||| ||||| ||||| ||||||||||| ||  |  ||||||| || |  |    
T  202905 ccagcaggcttctgatgttcaactttagatttctgacaaatcaaacattcatatacaaactgtgcaacattacgtttgaatgcggaccaccaaaacaatt 202806  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    |||| || || ||||||||||| ||||||||| |||||||||| ||||||||||| ||||| |||||    
T  202805 tcttcaagtcatgatacatctttgtagctccctgatgaatacttaagctacttctgtgactttcttc 202739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 29867 - 29816
Alignment:
Q  145 tagctcccagatgaatactcaagctacttctatgactctcttcaagaatcat 196  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  29867 tagctcccgggtgaatactcaagctacttctatgactctcttcaagcatcat 29816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 27133 - 27304
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || || | ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  27133 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacaagcataaacaaaatgagcaacatatcttttcaaaccggaccaccaaaacagtttct 27232  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  27233 tcaaatcatggtacatctttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 27304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 16147 - 15976
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| |||||||||||||  || |||  ||| ||||| || || ||||  | |||||||||  ||||||| || |  ||||    
T  16147 gcaggcttctgatgctcaaccttggacttctgacaaatcaaacagccataaacaaactgagcaacatctcttttcaaaccggaccaccaaaacagtttct 16048  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || |||||||| ||||| ||| | ||||||||||| |||||  | |||||||| ||||||||||    
T  16047 tcaaatcatggtacatctttgtagcccccgggtgaatactcaacctactcttgtgactctcctcaagaatca 15976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 19992 - 20155
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| ||||||||||||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  19992 gcaggcttctgatgttcaacctttgacttctgacaagtcaaacatgcatacacaaactgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 20091  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    | ||||| |||||||  || ||||||||  |||||||||||||||||||  | |||||||||||    
T  20092 tcaaatcatgatacaaattagtagctccaggatgaatactcaagctactcttgtgactctcttc 20155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 15832 - 15738
Alignment:
Q  49 acttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttc 143  Q
    |||| |||||||  || |||||||||||||| |||||||||| | ||||||| ||| ||||||| || | |||||| ||||| ||||||||||||    
T  15832 acttttgacaaatcaaacaggaatacacaaactgtgccacatcatgtttcaatccagaccaccaaaacaacttcttcaaatcatgatacatcttc 15738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 13070 - 13220
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaacca-ccagaaaatcttc 122  Q
    ||||| |||||||| |||| ||| |||||| |||||   || || | |||||||||||| || |||| ||| ||||||||  |||| ||| || | ||||    
T  13070 gcaggcttctgatgttcaaccttagacttcagacaagtcaaacatgcatacacaaattgagcgacatcacgcttcaaaccggaccaaccaaaacagcttc 13169  T
Q  123 tttaaatcgtgatacatcttcgtagc-tcccagatgaatactcaagctact 172  Q
    |||||||| |||||||| |||||||| |||| |||||||||| ||||||||    
T  13170 tttaaatcatgatacattttcgtagcttcccggatgaatacttaagctact 13220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 7140 - 7086
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  7140 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 7086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 40196 - 40042
Alignment:
Q  21 ccagcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatct 120  Q
    |||||| |||||||||| ||||  || || ||||||||||  || || | ||| ||||| ||||| |||| ||||||||| ||  ||||||| || |  |    
T  40196 ccagcaagtttctgatgttcaactttagatttctgacaaatcaaacatgcatatacaaactgtgcaacatcacgtttcaatccggaccaccaaaacaatt 40097  T
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttct 175  Q
    |||| || || ||||| ||||| ||||||||| |||||||||| |||||||||||    
T  40096 tcttcaagtcatgataaatctttgtagctcccggatgaatacttaagctacttct 40042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 48572 - 48483
Alignment:
Q  92 acgtttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgact 181  Q
    ||||||||||||  ||||||| || | ||| || |||||||| ||||| || ||||||||| |||||||||||||||||||  |||||||    
T  48572 acgtttcaaaccggaccaccaaaacagctttttcaaatcgtggtacatttttgtagctcccggatgaatactcaagctactcttatgact 48483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 13733 - 13585
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||||||| |||| ||| |||||||| |||   || || | ||||||||| || || || | ||| ||||||||  ||||||| || | |||||    
T  13733 gcaggcttctgatgttcaaccttagacttctggcaagtcaaacatgcatacacaaaatgagcgacgtcacgcttcaaaccggaccaccaaaacagcttct 13634  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| |||||||| || |||||||| ||||||||||| ||||||||    
T  13633 tcaaatcatgatacatttttgtagctcctagatgaatacttaagctact 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 19793 - 19869
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||  ||||||| || | ||| || ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  19793 ttcaaaccggaccaccaaaacaactttttcaaatcatgatacatcttcgtagctcccgaatgaatactcaagctact 19869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 23955 - 24031
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||||  ||||||| || | ||| || ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  23955 ttcaaaccggaccaccaaaacaactttttcaaatcatgatacatcttcgtagctcccgaatgaatactcaagctact 24031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 249485 - 249633
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||| ||||| || || || | ||||||||||||  ||||||| || | |||||    
T  249485 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcatgcatatacaaaatgagctacgtcacgtttcaaaccggaccaccaaaacagcttct 249584  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    | ||||| || ||||| || ||||| ||| | ||||||||||| |||||    
T  249585 tcaaatcatggtacatttttgtagcccccgggtgaatactcaaactact 249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 26775 - 26834
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| |||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  26775 tcttcaaatcatgatacatcttcgttgctcctggatgaatactcaaactacttctatgac 26834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 10809 - 10743
Alignment:
Q  106 accaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||| || | |||||| ||||| |||||||| |||||||||||| |||||||||| ||||||||    
T  10809 accaccaaaacaacttcttcaaatcatgatacattttcgtagctcccggatgaatacttaagctact 10743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 21023 - 20957
Alignment:
Q  106 accaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    ||||||| || | |||||| ||||| |||||||| |||||||||||| |||||||||| ||||||||    
T  21023 accaccaaaacaacttcttcaaatcatgatacattttcgtagctcccggatgaatacttaagctact 20957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 3281 - 3222
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| |||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  3281 tcttcaaatcctgatacatcttcgttgctcctggatgaatactcaaactacttctatgac 3222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 20266 - 20437
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||||||||| || || |||| ||| || |||||  ||||||| || |  ||||    
T  20266 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcatgcatacacaaactgagcaacatcacgctttaaaccggaccaccaaaacagattct 20365  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||  | ||||||||||| |||||  | ||||||||||| |||||||    
T  20366 tcaaatcatggtacatttttgtagcccctgggtgaatactcaaactactcttgtgactctcttctagaatca 20437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 23086 - 23257
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| ||||||||||||| ||| ||||||||||||   ||||| | ||||||||| || || |||| ||| || |||||  ||||||| || |  ||||    
T  23086 gcaggcttctgatgctcaaccttagacttctgacaagtcaagcatgcatacacaaactgagcaacatcacgctttaaaccggaccaccaaaacagattct 23185  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    | ||||| || ||||| || ||||| ||  | ||||||||||| |||||  | ||||||||||| |||||||    
T  23186 tcaaatcatggtacatttttgtagcccctgggtgaatactcaaactactcttgtgactctcttctagaatca 23257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 7128 - 7198
Alignment:
Q  96 ttcaaaccaaaccaccagaaaatcttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaa 166  Q
    ||||||||| ||||||| || | |||||| || || |||||||| |||||||||||| |||||||||||||    
T  7128 ttcaaaccagaccaccaaaacaacttcttcaagtcatgatacattttcgtagctcccggatgaatactcaa 7198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 28184 - 28237
Alignment:
Q  119 cttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    |||||| ||||| |||||||| ||||||| ||||||||||||||| ||||||||    
T  28184 cttcttgaaatcatgatacattttcgtagatcccagatgaatacttaagctact 28237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 34437 - 34490
Alignment:
Q  119 cttctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    |||||| ||||| |||||||| ||||||| ||||||||||||||| ||||||||    
T  34437 cttcttgaaatcatgatacattttcgtagatcccagatgaatacttaagctact 34490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 583 - 420
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaa-aatcttc 122  Q
    ||||| ||||||||||||| ||| ||||||||||||   || || | ||| ||||| || || |||| | ||||||| ||| ||||||| || ||||| |    
T  583 gcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcataaacaaactgagcaacatcatgtttcaacccagaccaccaaaacaatct-c 485  T
Q  123 tttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttc 187  Q
    || |  || | ||||||||| |||||||| | ||||||||| ||||||||||| ||||| |||||    
T  484 ttcaggtcataatacatctttgtagctcctaaatgaatacttaagctacttctgtgactttcttc 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 197 - 344
Alignment:
Q  25 caggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttctt 124  Q
    |||| |||||||| ||||  || ||||||||||||   || || | ||||||||| || || || | | ||||||||||  ||||||| || |  |||||    
T  197 caggcttctgatgttcaactttagacttctgacaagtcaaacatgcatacacaaactgagcaacgtcatgtttcaaaccggaccaccaaaacagtttctt 296  T
Q  125 taaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
     ||||| || ||||| || ||||||||| |||||||||||||||||||    
T  297 caaatcatggtacatttttgtagctcccggatgaatactcaagctact 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 3511 - 3570
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  3511 tcttcaaatcttgatacatcttagtcgctcctggatgaatactcaaactacttctatgac 3570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 431 - 490
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || ||||| |||||||||||||| |||||| ||||||    
T  431 tcttcaaatcttgatacatcttagtcgctcctagatgaatactcaaactacttatatgac 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 19016 - 19075
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  19016 tcttcaaatcttgatacatcttagttgctcctggatgaatactcaaactacttctatgac 19075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 13877 - 13936
Alignment:
Q  121 tctttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    |||| ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  13877 tcttcaaatcttgatacatcttagtcgctcctggatgaatactcaaactacttctatgac 13936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 3207 - 3153
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  3207 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 3153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 12366 - 12432
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacat 90  Q
    |||||||||||||| |||| ||| ||||| |||||||  || ||||||||||| || ||||||||||    
T  12366 gcaggtttctgatgttcaacctttgacttttgacaaatcaaacaggaatacaccaactgtgccacat 12432  T

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Target: scaffold0244 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 195
Target Start/End: Original strand, 18226 - 18392
Alignment:
Q  30 ttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaa-atcttctttaaa 128  Q
    ||||||||||||| |||  |||||||||||   || || | ||| ||||| || || |||| || |||||| |||||||| || ||| |  ||||| |||    
T  18226 ttctgatgctcaaccttaaacttctgacaagtcaaacatgcataaacaaactgagcaacatcacatttcaacccaaaccatcaaaaacaatttcttcaaa 18325  T
Q  129 tcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaatca 195  Q
    |  |||||||| || ||||||||| |||||||||| ||||||||| | | ||| ||||| |||||||    
T  18326 tgatgatacatttttgtagctcccggatgaatacttaagctacttttgttactttcttccagaatca 18392  T

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Target: scaffold0225 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 24368 - 24422
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgac 180  Q
    ||||| ||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  24368 aaatcctgatacatcttagttgctcctggatgaatactcaaactacttctatgac 24422  T

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Target: scaffold0213 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 5668 - 5622
Alignment:
Q  126 aaatcgtgatacatcttcgtagctcccagatgaatactcaagctact 172  Q
    |||||||| ||||| || ||||||||| |||||||||||||||||||    
T  5668 aaatcgtggtacatttttgtagctcccggatgaatactcaagctact 5622  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 43655 - 43824
Alignment:
Q  24 gcaggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaattgtgccacattacgtttcaaaccaaaccaccagaaaatcttct 123  Q
    ||||| |||| |||||||| ||| ||||||||||||   ||||| | ||||||||| || || || | | ||||||||||  ||||||| || |  ||||    
T  43655 gcaggcttctaatgctcaaccttagacttctgacaagtcaagcatgcatacacaaactgagctacgtcaagtttcaaaccggaccaccaaaacagtttct 43754  T
Q  124 ttaaatcgtgatacatcttcgtagctcccagatgaatactcaagctacttctatgactctcttcaagaat 193  Q
    | ||||| |  ||||| || ||||| ||| | ||||||||||| |||||  | ||||||||||| |||||    
T  43755 tcaaatcattgtacatttttgtagcccccgggtgaatactcaaactactcttgtgactctcttctagaat 43824  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 24755 - 24807
Alignment:
Q  27 ggtttctgatgctcaagcttcgacttctgacaaactaagcaggaatacacaaa 79  Q
    ||||||||||| |||| |||||||||||||||||| || || | |||||||||    
T  24755 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatacacaaa 24807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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