View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1632_high_29 (Length: 367)
Name: NF1632_high_29
Description: NF1632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1632_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 14 - 351
Target Start/End: Original strand, 33127236 - 33127574
Alignment:
| Q |
14 |
taattctaggaatatatttgagggaggaaagacacattttatatatttatatagtaaaaacacattttctctatttctcattcctgtttctaaacccgag |
113 |
Q |
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| T |
33127236 |
taattctaggaatatatttgagggaggaaagacacattttatatatttatatagtgaagacacattttctctatttttcattcctgtttctaaacccgag |
33127335 |
T |
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| Q |
114 |
tttcattataacatcgattttcaaaagattcttttcgaggtatttactggtagtattattgcatatgtactaaaccattagtaacatttggtttgacatt |
213 |
Q |
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| T |
33127336 |
tttcattataacatcgattttcaaaagattcttttcgaggtatttactggtagtattattgcatatgtactaaaccattagtaacatttggtttgacatt |
33127435 |
T |
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| Q |
214 |
ttgcaaatcaagatgtttccttttgctaatggataaagtgctacaagtaagtattcttcgtacatgttaatatggttttgttttgattcaattgaaggct |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33127436 |
ttgcaaatcaagatgtttccttttgctaatggataaagtgctacaagtaagtattcttcgtacatgttaatatggttttgttttgattcaattgaaggct |
33127535 |
T |
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| Q |
314 |
-cagaactttgactctggactgtagtgtccagttgcttt |
351 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
33127536 |
ccagaactttgactctggactgtagtgtccagttgcttt |
33127574 |
T |
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