View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1632_high_42 (Length: 291)
Name: NF1632_high_42
Description: NF1632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1632_high_42 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 50060382 - 50060129
Alignment:
| Q |
11 |
cagagaacacaaaaccaaaacttaaacttatgtgtaatgagcacttgatgcgacggtcatgaatttttctctctctccgttcattataagtttttcgctc |
110 |
Q |
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| T |
50060382 |
cagaaaacacaaaaccaaaacttaaacttaagtgtaatgagcacttgatgcgacgatcatgagtttttcgctctctatgttcattgtaagtttttcgctc |
50060283 |
T |
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| Q |
111 |
aataaactatatccttcaagtcttgatctcggagaaattcattataagtttcgaaaggttttttgtaaacaaacaataggatgaaaatttataattaaat |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
50060282 |
aataaactatatccttcaagtcttgatctcggagaaattcattataagtttcgaaaggttttttgtaaacaaacaatagtatgaaaatttataattaaat |
50060183 |
T |
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| Q |
211 |
acgaagttaagggtattttagtcatgaaatcagaatttaaaggcgtgtgactag |
264 |
Q |
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| T |
50060182 |
atgaagttaagggtattttagtcatgaaatcagaatttaaaggcgtgtgactag |
50060129 |
T |
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