View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1632_high_50 (Length: 252)
Name: NF1632_high_50
Description: NF1632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1632_high_50 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 8924891 - 8924648
Alignment:
| Q |
1 |
ccacaaaatccaaaacaaaacccttaagccaaaactccttaaaatggcaacatggccttcaaaatggcatatgatctatagacatcacaaactagaatga |
100 |
Q |
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| T |
8924891 |
ccacaaaatccaaaacaaaacccttaagccaaaactccttaaaatggcaacatgaccttcaaaatggcatatgatctatagacatcacaaactagaatga |
8924792 |
T |
|
| Q |
101 |
taatcttaaacttcctgccaaatgattttcataagaaaagagaggtgacacaacttagttaaaggaaacttcttcaaaaactgtttaaatctagggcatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8924791 |
taatcttaaacttcctgccaaatgattttcataagaaaagagaggtgacacaacttagttaaaggaaacttcttcaaaaactgtttaaatctagggcatc |
8924692 |
T |
|
| Q |
201 |
atatgaaccaagtaaatctaatattcatcatcagtatattcttc |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8924691 |
atatgaaccaagtaaatctaatattcatcatcagtatattcttc |
8924648 |
T |
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