View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1632_high_56 (Length: 238)
Name: NF1632_high_56
Description: NF1632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1632_high_56 |
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Alignment Details
Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 48092546 - 48092754
Alignment:
| Q |
1 |
tctcaataaatgaggcatttcggatgtaatgataatgtagtgtatggtgggtatgttagaatcacgacgattcatacctaccatgatactaaacacaaac |
100 |
Q |
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| T |
48092546 |
tctcaataaatgaggcatttcggatgtaatgttaatgtagtgtatggtgggtatgttagaatcacgaccattcacacctaccatgatactaaacacaaac |
48092645 |
T |
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| Q |
101 |
atatatagtttattaagatatagnnnnnnnaatttgttgttttatgaagtagttagctagcgtgttgattgatatatatatgttagaataataataacat |
200 |
Q |
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| T |
48092646 |
atatatagtttttt----ttttgttg-------ttgttgttgtatgaagtagttagctagcgtgttgattg--atatatatgttagaataataataacat |
48092732 |
T |
|
| Q |
201 |
ttgaattttgaaatattgttgt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
48092733 |
ttgaattttgaaatattgttgt |
48092754 |
T |
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