View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1632_low_20 (Length: 441)
Name: NF1632_low_20
Description: NF1632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1632_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 20 - 433
Target Start/End: Original strand, 38935644 - 38936057
Alignment:
| Q |
20 |
ggattcgtgtgcgttctggtaagttttcttgataatgttgatggtggagttgaaaggagtgtggaattgcttgaacaggttgttattgcgttggatttgg |
119 |
Q |
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| T |
38935644 |
ggattcgtgtgcgttctggtaagttttcttgataatgttgatggtggagttgaaaggagtgtggaattgcttgaacaggttgttattgcgttggatttgg |
38935743 |
T |
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| Q |
120 |
ttctatgtaaaattgagaatcgcgaatcgattttgaagagcaagaaggagaacgaaagtaagagtatactagattctttgcttcttgttcttcaacaagg |
219 |
Q |
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| T |
38935744 |
ttctatgtaaaattgagaatcgcgaatcgattttgaagagcaagaaggagaacgaaagtaagagtatactagattctttgcttcttgttcttcaacaagg |
38935843 |
T |
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| Q |
220 |
aagttgcgaatcaaaaattgcttcggttagggtgttgaaattcatagcggtggacacagaatcgaagcttctagtagctgaaaaagaaggtttactatca |
319 |
Q |
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| T |
38935844 |
aagttgcgaatcaaaaattgcttcggttagggtgttgaaattcatagcggtggacgcagaatcgaagcttctagtagctgaaaaagaaggtttactatca |
38935943 |
T |
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| Q |
320 |
gaattgctcaatcaaatcacgccggagaaagatcagaacctaatggagaacgcactttcgtgtttggtagcaatctcaacgccgaaacggaacaaggcga |
419 |
Q |
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| T |
38935944 |
gaattgctcaatcaaatcacgccgaagaaagatcagaacctaatggagaacgcactttcgtgtttggtagcaatctcaacgccgaaacggaacaaggcga |
38936043 |
T |
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| Q |
420 |
aactggttcatctc |
433 |
Q |
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| T |
38936044 |
aactggttcatctc |
38936057 |
T |
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