View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1632_low_48 (Length: 270)
Name: NF1632_low_48
Description: NF1632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1632_low_48 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 48121324 - 48121566
Alignment:
| Q |
13 |
aatatatttagtacatctctctaggccaggacaatagttgttgttaatatctacgaacatttttcgaacaaaagtacaatccattaaatcaaccaaaaat |
112 |
Q |
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| T |
48121324 |
aatatatttagtacatctctctaggccaggacaatagttgttgttaatatctacgaacatttttcgaacaaaagtacaatccattaaatcaaccaaaaat |
48121423 |
T |
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| Q |
113 |
ggtccatagtgatacaaaccatatgccacttccacagcagtagcaagttgtgtgtacaagtatggagccatgcaaccagtcgtgccataattatccaatg |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
48121424 |
ggtccatagtgatacaaaccatatgccacttccacagcagtagcaagttgtgtgtacaagtatggagccatgcaaccagtcgtaccataattatccaatg |
48121523 |
T |
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| Q |
213 |
gagaaacttggcatgtataattcttccacacctgcttggatat |
255 |
Q |
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| T |
48121524 |
gagaaacttggcatgtataattcttccacgcctgcttggatat |
48121566 |
T |
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