View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1632_low_52 (Length: 255)
Name: NF1632_low_52
Description: NF1632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1632_low_52 |
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Alignment Details
Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 33949769 - 33950012
Alignment:
| Q |
1 |
aatgacttaaaagtgattggttgggtaccttattatattgtagatgagtactataaa-cactctctttctacattttcttaaatatctacttttttaatg |
99 |
Q |
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| T |
33949769 |
aatgacttaaaagtgattggttgggtaccttattctattgtagaggagtgctataaaacactctctttctacattttcttaaatatctatttttttaatg |
33949868 |
T |
|
| Q |
100 |
gataaaattcatgtaagtaccatatattagaaatagatcacacataaagttgtaaaactcatatgagtttcacataaatgagaatgaacgttagagagag |
199 |
Q |
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|||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||| ||||| | ||||||||||| | |||||||| |
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| T |
33949869 |
gataaaattcatgtaaataccatatattagaaatagatcatacataaagttgtgaaacccatatgagtgtcacaaatatgagaatgaatataagagagag |
33949968 |
T |
|
| Q |
200 |
t--gttaaaatgagtgtagtgaaattctttgatgtatcaaatct |
241 |
Q |
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| T |
33949969 |
tgcgctaaaaagagtgtagtgtaattctttgatgcatctaatct |
33950012 |
T |
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