View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16332_low_6 (Length: 253)
Name: NF16332_low_6
Description: NF16332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16332_low_6 |
 | |
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| [»] scaffold0491 (2 HSPs) |
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| [»] chr8 (5 HSPs) |
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| [»] chr7 (13 HSPs) |
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| [»] chr4 (4 HSPs) |
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| [»] chr1 (2 HSPs) |
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| [»] chr3 (1 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: scaffold0491 (Bit Score: 229; Significance: 1e-126; HSPs: 2)
Name: scaffold0491
Description:
Target: scaffold0491; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 1440 - 1196
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
1440 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
1341 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
1340 |
ttgccttaaagaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
1241 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1240 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
1196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 6327 - 6083
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
6327 |
gacataatcaaagcgacagaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
6228 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |
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|
| T |
6227 |
ttgccttaaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaaca |
6128 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||| |||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
6127 |
tatcgtgaagctttatggtttctgcttgcacaaaagaatcatgtt |
6083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 18739561 - 18739317
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18739561 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18739462 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18739461 |
ttgccttaaagaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
18739362 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18739361 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
18739317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 18744525 - 18744281
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18744525 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18744426 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18744425 |
ttgccttaaagaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
18744326 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18744325 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
18744281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 18749486 - 18749242
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18749486 |
gacataatcaaagcgacagaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18749387 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |
|
|
| T |
18749386 |
ttgccttaaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaaca |
18749287 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18749286 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
18749242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 18723834 - 18723590
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18723834 |
gacataatcaaagcgacagaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18723735 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |
|
|
| T |
18723734 |
ttgccttaaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaaca |
18723635 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18723634 |
tatagtgaagctttatggattctgcttgcacaaaagaatcatgtt |
18723590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 18733045 - 18732996
Alignment:
| Q |
151 |
cttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaag |
200 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18733045 |
cttttgattagagttttagaaatgaagtgagaatattatcagaaataaag |
18732996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 1541790 - 1541546
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
1541790 |
gacatcatcaaagcaacagaagacttcgacatgagatattgcattggaaccggagcatatggaagtgtttacaaggcacaattaccatgtggaaaggttg |
1541691 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1541690 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
1541591 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1541590 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
1541546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 1105839 - 1106083
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1105839 |
gacataatcaaagcaacggaagactttgacatgagatattgcattggaactggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
1105938 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1105939 |
ttgccttaaagaaacttcacggctatgaagtcgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcaccgaca |
1106038 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1106039 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
1106083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 1595896 - 1596140
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
1595896 |
gacataatcaaagcaacagaagactttgacatgagatattgcattggaacgggagcatatggaagtgtttacagggcacaattaccaagtggaaaggttg |
1595995 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1595996 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcaccgaca |
1596095 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1596096 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
1596140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 1088490 - 1088734
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1088490 |
gacattattaaagcaacagaggactttgacatgagatattgcattggaacaggagcatatagaagtgtttacaaggcacaattaccaagtggcaaggttg |
1088589 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1088590 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcacaaaca |
1088689 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1088690 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
1088734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 1557734 - 1557490
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| |
|
|
| T |
1557734 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggtaatgttg |
1557635 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1557634 |
ttgctttaaagaaacttcacggctatgaagctgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcacaaaca |
1557535 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1557534 |
tatcgtgaagctttatggattctgcttgcacaaaagaatcatgtt |
1557490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 20 - 253
Target Start/End: Original strand, 1604237 - 1604470
Alignment:
| Q |
20 |
agcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
119 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1604237 |
agcaacggaagacttcgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
1604336 |
T |
|
| Q |
120 |
aaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
219 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1604337 |
aaacttcacggctatgaagaagaggttccatcttttgatgagagtttcaaaaatgaagtgaaaatattatcagaaataaagcaccgacatattgtgaagc |
1604436 |
T |
|
| Q |
220 |
tttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |
|
|
| T |
1604437 |
tttatggattctgcttgcacaaaagaatcatgtt |
1604470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 1551024 - 1550780
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
1551024 |
gacattattaaagcaacagaagactttgacatgagatattgcattggaaccggagcatatggaagtgtttacaaggcacaattaccatgtggcaaggttg |
1550925 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
| ||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1550924 |
tcgccttaaagaaacttcatggctatgaagcagacgttccatcttttgatgagagtttcagaaatgaagtgagaatattgacagaaataaagcaccgaca |
1550825 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||| ||||||||||| |
|
|
| T |
1550824 |
tattgtgaagcttcatggattctgcttgcacaagagaatcatgtt |
1550780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 2321032 - 2321276
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
|||||||| | |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| |
|
|
| T |
2321032 |
gacatcattagagcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggaaaagttg |
2321131 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||| | ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
2321132 |
ttgccttgaagaaacttcacggctatgaagcagagctgccagcttttgatgaaagttttagaaatgaagtgagaatattatcagaaataaagcaccgaaa |
2321231 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2321232 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
2321276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 2329530 - 2329774
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| |
|
|
| T |
2329530 |
gacatcattaaagcaacagaagactttgacattagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggaaaagttg |
2329629 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
2329630 |
ttgcaataaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagatataaagcaccggca |
2329729 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||| ||||||||||||||||| || | |||| |||||||||||| |
|
|
| T |
2329730 |
tatcgtgaagctttatggattctgtctccacagaagaatcatgtt |
2329774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 2337429 - 2337673
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| || |||| |
|
|
| T |
2337429 |
gacattattaaagcaacagaagactttgacattagatattgcattgggacaggagcatatggaagtgtttataaggcacaattaccatgtggaaaagttg |
2337528 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
2337529 |
ttgcaataaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgaaaatattatcagatataaagcaccgaca |
2337628 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||| ||||||||||||||||| || | |||| |||||||||||| |
|
|
| T |
2337629 |
tatcgtgaagctttatggattctgtctccacagaagaatcatgtt |
2337673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 3955782 - 3955546
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
3955782 |
gacatcattagagcaacaaaagactttgacattaaatattgcattggaaaaggagcatatggaagtgtttacaaggcacaattaccaagtggtaaatttg |
3955683 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||| |||| |||||||| |||| ||||| ||||| |||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||||| || | |
|
|
| T |
3955682 |
ttgcactaaaaaaacttcatagctacgaagcagaggtgccatctcttgatgaaagttttagaaatgaagtgaaaatattatcagaaataaagcacagaaa |
3955583 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaaga |
245 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
3955582 |
tattgtgaagctttatggattttgtttgcataaaaga |
3955546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 9532375 - 9532131
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| || ||||||| | || |||||||||| ||||||||||| | |||||||||||||||||||| |||||| | ||||||||| ||| ||| |||| |
|
|
| T |
9532375 |
gacattattaaagcaatacaacactttgacattagatattgcatatggacaggagcatatggaagtgtatacaagactcaattaccatgtgacaaagttg |
9532276 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
| |||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||||| |||||||| ||||||||||| | ||||||| ||| | | |
|
|
| T |
9532275 |
tcgccttaaagaaacttcacatctatgaagcagaggtgccatcttttgatgcgagtttcaaaaatgaagcgagaatattataaaaaataaatcacataaa |
9532176 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
|||||| |||||||||||||| || ||| |||||||||||||||| |
|
|
| T |
9532175 |
tattgttaagctttatggattatgattgtacaaaagaatcatgtt |
9532131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 30792145 - 30792379
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| || ||||||||| || |||||||||| ||||||| ||| | ||| ||| | ||| |||||| |||||| | || ||| || ||||||| |||| |
|
|
| T |
30792145 |
gacattattaaagcaacataacactttgacattagatattacatcgagacatgaggacatgaaagtgtatacaagactcatttatcatgtggcaaagttg |
30792244 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
|||||||| ||||||||||| ||||||| | | || ||||||||| | ||||||| |||||||||||||||||||||| ||||||||||| | | |
|
|
| T |
30792245 |
ttgccttatagaaacttcacaactatgaaacaaatgtgtcatcttttgttacaagtttcataaatgaagtgagaatattatcataaataaagcacataaa |
30792344 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaa |
243 |
Q |
| |
|
|||||| ||||||||| |||| ||||||||||||| |
|
|
| T |
30792345 |
tattgttaagctttatagattctgcttgcacaaaa |
30792379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 31 - 253
Target Start/End: Complemental strand, 42978019 - 42977797
Alignment:
| Q |
31 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacgg |
130 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| |
|
|
| T |
42978019 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
42977920 |
T |
|
| Q |
131 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattt |
230 |
Q |
| |
|
||||||||| || || |||||||||||| || |||||||| ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
42977919 |
ctatgaagcagatgtgtcatcttttgatgcgaatttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattt |
42977820 |
T |
|
| Q |
231 |
tgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
42977819 |
tgcttgcacaaaagaatcatgtt |
42977797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 48712677 - 48712459
Alignment:
| Q |
31 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacgg |
130 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| |
|
|
| T |
48712677 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
48712578 |
T |
|
| Q |
131 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattt |
230 |
Q |
| |
|
|||| |||| || || | |||||||||| || |||||||| ||||||||||||||||||| ||||||| || | ||||||| ||||||||||||||| |
|
|
| T |
48712577 |
ctattaagcagatgtgtcttcttttgatgcgattttcagaattgaagtgagaatattatcaaaaataaa-cagataaatattgttaagctttatggattt |
48712479 |
T |
|
| Q |
231 |
tgcttgcacaaaagaatcat |
250 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
48712478 |
tgcttgcacaaaagaatcat |
48712459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 253
Target Start/End: Original strand, 54122784 - 54123006
Alignment:
| Q |
31 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacgg |
130 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| |
|
|
| T |
54122784 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
54122883 |
T |
|
| Q |
131 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattt |
230 |
Q |
| |
|
||||||||| || || |||||||||||| |||||||| || ||||||||||||||||| | |||||||||| | |||| | ||||||||| |||| |
|
|
| T |
54122884 |
ctatgaagcagatgtgtcatcttttgatgtgagtttcacaattgaagtgagaatattataaaaaataaagcagataaatatctttaagctttatatattt |
54122983 |
T |
|
| Q |
231 |
tgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
54122984 |
tgcttgcacaaaagaatcatgtt |
54123006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 16880134 - 16880331
Alignment:
| Q |
7 |
tggacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggt |
106 |
Q |
| |
|
||||||| || |||| |||| || |||||||||| ||||||||||| || ||| |||||||||||||||| |||||| | | ||||||| | |||| || |
|
|
| T |
16880134 |
tggacattattaaagaaacacaacactttgacattagatattgcatcggcacaagagcatatggaagtgtatacaagactcgattaccatcttgcaaagt |
16880233 |
T |
|
| Q |
107 |
tgttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaa-gtgagaatattatcagaaataaagcac |
203 |
Q |
| |
|
|| |||||||||||| ||||| |||||||| | || |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16880234 |
tgccgccttaaagaaatttcacaactatgaagtaaaagtgtcatcttttgatgcgagtttcagaaatgaatgtgagaatattatcagaaataaagcac |
16880331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 19250247 - 19250491
Alignment:
| Q |
9 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
108 |
Q |
| |
|
||||| || ||||||||| || |||||||||| ||||||||||| |||||| |||||| |||||| |||||| | | ||||||| |||| || |||| |
|
|
| T |
19250247 |
gacattattaaagcaacacaacactttgacattagatattgcatcatgacaggatcatatgaaagtgtatacaagactcgattaccatgtggtaaagttg |
19250346 |
T |
|
| Q |
109 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
208 |
Q |
| |
|
| || ||||||||| ||||| |||||||| || || || |||||||||| ||||||||||| ||||||||||||||||||| | ||||| ||| | | |
|
|
| T |
19250347 |
tcgctttaaagaaatttcacaactatgaagtagatgtgccgtcttttgatgcgagtttcagaattgaagtgagaatattatcatatataaaacacataaa |
19250446 |
T |
|
| Q |
209 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19250447 |
tattgttaagctttatggattctgcttgcacaaaagaatcatgtt |
19250491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 253
Target Start/End: Complemental strand, 41669093 - 41668871
Alignment:
| Q |
31 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacgg |
130 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| |
|
|
| T |
41669093 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
41668994 |
T |
|
| Q |
131 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattt |
230 |
Q |
| |
|
||||||||| || || |||||||||||| ||||||||||| |||||||| |||||||| | |||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
41668993 |
ctatgaagcagatgtgtcatcttttgatgtgagtttcagaattgaagtgaaaatattataaaaaataaagcagataaatattgttaagctttatggattt |
41668894 |
T |
|
| Q |
231 |
tgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
41668893 |
tgcttgcacaaaagaataatgtt |
41668871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 31 - 253
Target Start/End: Original strand, 31657883 - 31658105
Alignment:
| Q |
31 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacgg |
130 |
Q |
| |
|
|||||||||| ||||||||||| | ||| |||| |||||||||| |||||| | |||||| || ||||||| |||| ||||||||||||||||| |
|
|
| T |
31657883 |
actttgacattagatattgcatcgtgacataagcacatggaagtgtatacaagactcaattatcatgtggcaaatttgtcaccttaaagaaacttcacaa |
31657982 |
T |
|
| Q |
131 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattt |
230 |
Q |
| |
|
||| ||| || || |||||||||||| || |||||||| ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
31657983 |
ctacgaaatagatgtgtcatcttttgatgcgaatttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattt |
31658082 |
T |
|
| Q |
231 |
tgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
31658083 |
tgcttgcacaaaagaatcatgtt |
31658105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 62 - 253
Target Start/End: Original strand, 36620505 - 36620693
Alignment:
| Q |
62 |
agcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgag |
161 |
Q |
| |
|
||||||||||||| | |||||| | |||||| || ||||||| ||| ||||||||||||||||| |||| |||| || || ||||||||||| | |
|
|
| T |
36620505 |
agcatatggaagtttatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaactattaagcagatgt---atcttttgatgcg |
36620601 |
T |
|
| Q |
162 |
agtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36620602 |
agtttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattttgcttgcacaaaagaatcatgtt |
36620693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 253
Target Start/End: Complemental strand, 8873340 - 8873117
Alignment:
| Q |
31 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacgg |
130 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| |
|
|
| T |
8873340 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgcgaccttaaagaaacttcacaa |
8873241 |
T |
|
| Q |
131 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatgga-tt |
229 |
Q |
| |
|
||||||||| || || |||| ||||||| |||||||||| ||||||||||||||||| | |||||||||| | ||||| | |||||||||||| || |
|
|
| T |
8873240 |
ctatgaagcagatgtgtcatcgtttgatgccagtttcagaattgaagtgagaatattataaaaaataaagcagataaatattattaagctttatggattt |
8873141 |
T |
|
| Q |
230 |
ttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
8873140 |
ttgcttgcacaaaagaatcatgtt |
8873117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 62 - 253
Target Start/End: Complemental strand, 39102501 - 39102311
Alignment:
| Q |
62 |
agcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgag |
161 |
Q |
| |
|
||||||||||||| | |||||| | |||||| || ||||||| ||| |||||||||| |||||| |||| |||| || || |||||||||||| | |
|
|
| T |
39102501 |
agcatatggaagtttatacaagactcaattatcatgtggcaaatttgcctccttaaagaa-cttcacaactattaagcagatgtgtcatcttttgatgcg |
39102403 |
T |
|
| Q |
162 |
agtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattttgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
||||| |||| ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
39102402 |
agttttagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattttgcttgcacaaaagaagcatgtt |
39102311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 253
Target Start/End: Original strand, 1257677 - 1257899
Alignment:
| Q |
31 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcacgg |
130 |
Q |
| |
|
|||||||||| ||||||||||| | ||| |||||||| |||||| |||||| | |||||| || ||||| | ||| ||||||||||||||||| |
|
|
| T |
1257677 |
actttgacattagatattgcatcgtgacataagcatatgaaagtgtatacaagactcaattatcatgtggccaatttgccaccttaaagaaacttcacaa |
1257776 |
T |
|
| Q |
131 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattt |
230 |
Q |
| |
|
|||||||| || || ||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||| | ||||||| || ||||||| |||| |
|
|
| T |
1257777 |
atatgaagcagatgtgtcattttttgatgcgagtttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaaactttatgaattt |
1257876 |
T |
|
| Q |
231 |
tgcttgcacaaaagaatcatgtt |
253 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
1257877 |
tgtttgcacaaaagaatcatgtt |
1257899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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