View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16335_low_5 (Length: 337)
Name: NF16335_low_5
Description: NF16335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16335_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 7369612 - 7369927
Alignment:
| Q |
1 |
ttaccattgttaaggaatgtctccttacaaacttgacactaaagttgttaaaatacagcaacgaactcaataaaaagagacgagatgtcgacaatcagaa |
100 |
Q |
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| T |
7369612 |
ttaccattgttaaggaatgtctccttacaaacttgacactaaagttgttaaagtatagcaacgaactcaataaaaagagacgagatgtcgacaatcagaa |
7369711 |
T |
|
| Q |
101 |
atcatggcaacaaacaaactcaataaaaagagaagagacgttgacactcggaaactatggcaacgaactcaaagaatccttctttgaagcttgaaagtta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
7369712 |
atcatggcaacaaacaaactcaataaaaagagaagagacgttgacactcggaaactatggcaacgaactcaaataatccttctttgaagcttgaaagtta |
7369811 |
T |
|
| Q |
201 |
caactacttgcttgaaattctttcatcacattatcaccttcactcgttcatgagcaacatttcatcataaaaaatgatgaattaatgatgaagtaaacgc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7369812 |
caactacttgcttgaaattctttcatcacattatcaccttcactcgttcatgagcaacatttcatcataaaaaatgatgaattaatgatgaagtaaacgc |
7369911 |
T |
|
| Q |
301 |
ataagtaatagtagta |
316 |
Q |
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|||||||||||||||| |
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| T |
7369912 |
ataagtaatagtagta |
7369927 |
T |
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