View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16338_high_1_N (Length: 530)

Name: NF16338_high_1_N
Description: NF16338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16338_high_1_N
NF16338_high_1_N
[»] scaffold0057 (1 HSPs)
scaffold0057 (38-530)||(40893-41384)
[»] chr2 (10 HSPs)
chr2 (413-530)||(32252300-32252417)
chr2 (254-353)||(32251916-32252015)
chr2 (254-349)||(44586183-44586278)
chr2 (254-348)||(23656183-23656277)
chr2 (420-521)||(35922479-35922580)
chr2 (420-513)||(16858604-16858698)
chr2 (448-521)||(23656678-23656751)
chr2 (351-406)||(24786348-24786403)
chr2 (43-116)||(16767907-16767980)
chr2 (358-406)||(44586336-44586384)
[»] chr6 (15 HSPs)
chr6 (412-530)||(9190830-9190945)
chr6 (254-349)||(9191335-9191430)
chr6 (255-344)||(14989101-14989190)
chr6 (255-349)||(8403526-8403620)
chr6 (351-406)||(10906594-10906649)
chr6 (49-116)||(22501886-22501953)
chr6 (416-513)||(10641512-10641612)
chr6 (351-403)||(19547207-19547259)
chr6 (449-521)||(21083655-21083727)
chr6 (255-346)||(14979989-14980080)
chr6 (420-530)||(7848282-7848392)
chr6 (351-401)||(8403659-8403709)
chr6 (352-406)||(9191229-9191283)
chr6 (449-521)||(21038032-21038104)
chr6 (351-401)||(14980132-14980182)
[»] chr4 (19 HSPs)
chr4 (47-155)||(25352429-25352537)
chr4 (255-349)||(15872579-15872673)
chr4 (417-503)||(9564155-9564241)
chr4 (255-349)||(15890171-15890265)
chr4 (254-345)||(11556227-11556318)
chr4 (254-347)||(16284759-16284852)
chr4 (255-345)||(12229192-12229282)
chr4 (444-512)||(11936278-11936346)
chr4 (274-347)||(17338003-17338078)
chr4 (254-347)||(18231205-18231294)
chr4 (467-530)||(6821294-6821357)
chr4 (351-401)||(16284906-16284956)
chr4 (422-503)||(15873166-15873247)
chr4 (351-403)||(18556782-18556834)
chr4 (457-503)||(12136853-12136899)
chr4 (364-402)||(12229091-12229129)
chr4 (351-401)||(15872724-15872774)
chr4 (351-401)||(15890316-15890366)
chr4 (370-406)||(17337895-17337931)
[»] chr3 (27 HSPs)
chr3 (46-116)||(34279567-34279637)
chr3 (351-406)||(5943814-5943869)
chr3 (255-346)||(16642595-16642686)
chr3 (254-348)||(14481350-14481444)
chr3 (255-349)||(16359310-16359404)
chr3 (255-346)||(14054778-14054869)
chr3 (255-346)||(14062507-14062598)
chr3 (351-406)||(14481496-14481551)
chr3 (281-349)||(13926595-13926663)
chr3 (359-406)||(13926725-13926772)
chr3 (50-116)||(7237770-7237836)
chr3 (255-346)||(4712526-4712617)
chr3 (351-406)||(27870379-27870434)
chr3 (448-521)||(16362890-16362963)
chr3 (254-348)||(17791186-17791275)
chr3 (254-348)||(19099626-19099715)
chr3 (448-521)||(21974983-21975056)
chr3 (349-406)||(21975390-21975447)
chr3 (448-521)||(21997414-21997487)
chr3 (349-406)||(21997821-21997878)
chr3 (43-116)||(37508248-37508321)
chr3 (253-297)||(5943685-5943729)
chr3 (351-406)||(16642488-16642543)
chr3 (452-503)||(22159558-22159609)
chr3 (351-401)||(4712669-4712719)
chr3 (449-521)||(13927154-13927226)
chr3 (73-117)||(51940774-51940818)
[»] chr5 (18 HSPs)
chr5 (49-116)||(8726164-8726231)
chr5 (49-116)||(31698289-31698356)
chr5 (423-503)||(24757389-24757469)
chr5 (255-349)||(13936008-13936102)
chr5 (350-406)||(23960791-23960847)
chr5 (423-503)||(24615229-24615309)
chr5 (423-503)||(24711627-24711707)
chr5 (423-503)||(24744623-24744703)
chr5 (351-406)||(24831896-24831951)
chr5 (49-116)||(42838134-42838201)
chr5 (422-521)||(13935498-13935597)
chr5 (351-406)||(24615617-24615672)
chr5 (351-406)||(24712015-24712070)
chr5 (351-406)||(24745011-24745066)
chr5 (351-406)||(24757777-24757832)
chr5 (357-404)||(13935904-13935951)
chr5 (256-307)||(17458275-17458326)
chr5 (254-348)||(24831749-24831844)
[»] chr8 (4 HSPs)
chr8 (254-348)||(29294160-29294254)
chr8 (255-345)||(23658833-23658923)
chr8 (351-406)||(29294053-29294108)
chr8 (351-406)||(23658725-23658780)
[»] chr7 (13 HSPs)
chr7 (255-346)||(15867004-15867095)
chr7 (416-513)||(22614921-22615021)
chr7 (255-346)||(16060810-16060902)
chr7 (351-405)||(37945692-37945746)
chr7 (351-406)||(20026174-20026229)
chr7 (49-116)||(24768355-24768422)
chr7 (254-349)||(37945547-37945641)
chr7 (270-348)||(4531496-4531574)
chr7 (416-513)||(11655311-11655411)
chr7 (416-511)||(13477664-13477763)
chr7 (43-116)||(36962953-36963026)
chr7 (351-406)||(16060703-16060758)
chr7 (351-406)||(48376978-48377033)
[»] chr1 (8 HSPs)
chr1 (255-346)||(13881983-13882074)
chr1 (255-335)||(51626720-51626800)
chr1 (351-398)||(1566937-1566984)
chr1 (287-349)||(15541993-15542055)
chr1 (351-406)||(13882126-13882181)
chr1 (299-349)||(1566836-1566886)
chr1 (467-521)||(15541198-15541252)
chr1 (362-406)||(15541899-15541943)
[»] scaffold0737 (3 HSPs)
scaffold0737 (254-348)||(3393-3487)
scaffold0737 (448-503)||(3930-3985)
scaffold0737 (359-407)||(3547-3595)
[»] scaffold1269 (2 HSPs)
scaffold1269 (255-346)||(276-365)
scaffold1269 (351-406)||(169-224)
[»] scaffold0319 (2 HSPs)
scaffold0319 (255-346)||(13296-13387)
scaffold0319 (351-406)||(13439-13494)
[»] scaffold0218 (1 HSPs)
scaffold0218 (255-346)||(14675-14766)
[»] scaffold0003 (2 HSPs)
scaffold0003 (255-346)||(131080-131171)
scaffold0003 (351-406)||(130973-131028)
[»] scaffold0145 (2 HSPs)
scaffold0145 (254-347)||(12865-12958)
scaffold0145 (351-401)||(12761-12811)
[»] scaffold0091 (1 HSPs)
scaffold0091 (255-335)||(29367-29447)
[»] scaffold0166 (1 HSPs)
scaffold0166 (351-406)||(256-311)
[»] scaffold0094 (1 HSPs)
scaffold0094 (351-406)||(4569-4624)
[»] scaffold1001 (1 HSPs)
scaffold1001 (416-513)||(1226-1326)
[»] scaffold0290 (1 HSPs)
scaffold0290 (351-405)||(13973-14027)
[»] scaffold0385 (2 HSPs)
scaffold0385 (255-349)||(14515-14609)
scaffold0385 (448-521)||(13972-14045)


Alignment Details
Target: scaffold0057 (Bit Score: 425; Significance: 0; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 38 - 530
Target Start/End: Complemental strand, 41384 - 40893
Alignment:
Q  38 gacatggacatgtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgtgcaggaaaggtgcaagaaaaa 137  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||||||    
T  41384 gacatggacatgtgaaa-ctcatttttacccctgactttttaacaatattacataactgccatccacatgggcatgtgtacaagagaggtgcaagaaaaa 41286  T
Q  138 gggtatccatgaaacattgttctttatttactacaacaatgaattatttaagggttaataggtgtttagcactgttatttgggcatattttaatttatct 237  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41285 gggtatccatgaaacattgttctttatttactacaaaactgaattatttaagggttaataggtgtttagcactgttatttgggcgtattttaatttatct 41186  T
Q  238 ccctataaataatagttgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaaca 337  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41185 acctataaataatagttgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgttgtatgtaatgataaagaataagaaaaca 41086  T
Q  338 tcttgagactaaaaatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggggaaacaatgtttatctatgatgatgaggaga 437  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41085 tcttgagactaagaatagatgagagaatagagtatgtccgtaaaacgaataataaaataaaatagaggggaaacaatgtttatctatgatgatgaggaga 40986  T
Q  438 gtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgtttaagtgta 530  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40985 gtggtaatattttgtgtgtttgcaatagtgtcgtgcattttagaggaagtcttgcattaatatgtgggttatgtgactatgtgtttaagtgta 40893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 413 - 530
Target Start/End: Original strand, 32252300 - 32252417
Alignment:
Q  413 atgtttatctatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtg 512  Q
    |||||||| |||||||||||| ||||| ||||| ||||||||| |||||| || || |||||||||||||| |||||||||||||||||||| |||||||    
T  32252300 atgtttatatatgatgatgagaagagttgtaatgttttgtgtgcttgcaacagagttgtgcattttagggggagtcttgcattaatatgtggattatgtg 32252399  T
Q  513 actatgtgtttaagtgta 530  Q
    |||||||| |||||||||    
T  32252400 actatgtgcttaagtgta 32252417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 32251916 - 32252015
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaaaaat 353  Q
    ||||||||||||| | ||| |||||||||||  ||||||||||||||||||||  | ||||||||||||| |||| ||||||||||||||||||||||||    
T  32251916 tgaaagagttaatgataatagtgaggaagaatctagttatatagagaggagacattatatgtaatgataatgaattagaaaacatcttgagactaaaaat 32252015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 349
Target Start/End: Original strand, 44586183 - 44586278
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||| ||||  | | ||||||||||| ||| |||||||||||||||||||| ||||    
T  44586183 tgaaagagttaatggcaatggtgaggaagaacctagttatgtagggagggtaagttgtatgtaatgttaatgaataagaaaacatcttgagcctaa 44586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 23656183 - 23656277
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagacta 348  Q
    ||||||| |||||  ||| ||||||||||||| ||||||||||| ||||  | | ||||||||||||||| |||||||||||||| |||||||||    
T  23656183 tgaaagacttaatggcaacggtgaggaagaacctagttatatagggagggtaagttgtatgtaatgataatgaataagaaaacatattgagacta 23656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 420 - 521
Target Start/End: Original strand, 35922479 - 35922580
Alignment:
Q  420 tctatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgt 519  Q
    ||||||||||||| | ||||||| ||  |||||||| ||||| ||| ||||||||||||||| | ||||||||||| ||| ||||  |||||||||||||    
T  35922479 tctatgatgatgatgtgagtggtgatgatttgtgtgcttgcattagagtcgtgcattttaggaggagtcttgcattcataggtggaatatgtgactatgt 35922578  T
Q  520 gt 521  Q
    ||    
T  35922579 gt 35922580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 513
Target Start/End: Complemental strand, 16858698 - 16858604
Alignment:
Q  420 tctatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggg-gaagtcttgcattaatatgtgggttatgtga 513  Q
    ||||||||||||| |||||| || ||  |||||||||||| | ||| || ||||||||||||| | |||||||||||||||||||| ||||||||    
T  16858698 tctatgatgatgatgagagtagtgatgatttgtgtgtttgtattagagttgtgcattttagggaggagtcttgcattaatatgtggattatgtga 16858604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 521
Target Start/End: Original strand, 23656678 - 23656751
Alignment:
Q  448 tttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    |||||||||||||| ||| || ||||||||||| || |||||||||||||||||||  |||| ||| |||||||    
T  23656678 tttgtgtgtttgcattagagttgtgcattttagtgggagtcttgcattaatatgtgaattatttgaatatgtgt 23656751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 24786403 - 24786348
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||||| | ||| || |||||||||||||||||||||| ||||    
T  24786403 aatagatgagagaatagagcacgtctgtgagatgaataataaaataaaataaaggg 24786348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 16767980 - 16767907
Alignment:
Q  43 ggacatgtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    ||||||||||| ||||| |||| |||||   | |||||| | ||||||||||||||||||||||||||| ||||    
T  16767980 ggacatgtgaagtctcaattttgcccctgcctatttaacgaaattacaaaactgccatccacatgggcaggtgt 16767907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 406
Target Start/End: Original strand, 44586336 - 44586384
Alignment:
Q  358 gagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||| ||| ||| ||||||||| |||||||||||||||    
T  44586336 gagagaatagagtatttccataaaatgaataatgaaataaaatagaggg 44586384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 4e-33; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 412 - 530
Target Start/End: Complemental strand, 9190945 - 9190830
Alignment:
Q  412 aatgtttatctatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgt 511  Q
    |||||||||||||||||||||| |||||| |||| ||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  9190945 aatgtttatctatgatgatgagtagagtgataatgtttcgtgtgtttgcaatagagtcgtgcattttaaggggagtcttgcattaatatgtggattatgt 9190846  T
Q  512 gactatgtgtttaagtgta 530  Q
    |   |||||||||||||||    
T  9190845 g---atgtgtttaagtgta 9190830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 254 - 349
Target Start/End: Complemental strand, 9191430 - 9191335
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  9191430 tgaaagagttaatgacaatggtgaggaagaacctagttatataaagaggagacgttgtatgtaatgataaaaaataagaaaacatcttgaaactaa 9191335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 14989101 - 14989190
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgag 344  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||  || |||||||||||| ||||||||||||| ||||||    
T  14989101 gaaagagttaataacaattgtgaggaaaaacctagatatatagagcggagactttgcatgtaatgataacgaataagaaaacaacttgag 14989190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 8403526 - 8403620
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    |||||||||||| || |||||| |||||||| ||||| ||||||||||| ||  | ||||||||||||| |||| |||| |||||||||||||||    
T  8403526 gaaagagttaatgacgatggtggggaagaacctagttgtatagagaggatacattatatgtaatgataatgaattagaatacatcttgagactaa 8403620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 10906594 - 10906649
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||| || |||||||||||||||||||| | |||||||||||||||||||||||    
T  10906594 aatagacgaaagaatagagtatgtccgtaaaacgaataataaaataaaatagaggg 10906649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 22501953 - 22501886
Alignment:
Q  49 gtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    ||||||||||| ||||||||||   |||||||||| |||||||| |||||||||||||||||| ||||    
T  22501953 gtgaaatctcaattttaccccttcctttttaacaaaattacaaagctgccatccacatgggcaggtgt 22501886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 513
Target Start/End: Original strand, 10641512 - 10641612
Alignment:
Q  416 tttatctatgatgatgaggagagtggtaata---ttttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtg 512  Q
    ||||||||||||| ||| ||||||||| ||    ||||||||| ||||| |||  ||||||||||||||| || |||||||||| ||||||| |||||||    
T  10641512 tttatctatgatgctgatgagagtggtgatgatgttttgtgtgcttgcattagattcgtgcattttagggaaaatcttgcattagtatgtggattatgtg 10641611  T
Q  513 a 513  Q
    |    
T  10641612 a 10641612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 19547207 - 19547259
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaataga 403  Q
    ||||||||||||||||| ||||||| || ||||| ||||||||||||||||||    
T  19547207 aatagatgagagaatagggtatgtctgtgagatggataataaaataaaataga 19547259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 521
Target Start/End: Original strand, 21083655 - 21083727
Alignment:
Q  449 ttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    ||||||| ||||| ||| |||||||||||||| | ||||||||||||||||||||  |||| ||| |||||||    
T  21083655 ttgtgtgcttgcattagagtcgtgcattttagtgaaagtcttgcattaatatgtgaattatttgaatatgtgt 21083727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 14979989 - 14980080
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||  | |||   || |||||||||||  ||||||||||||| ||||||||    
T  14979989 gaaagagttaataacaattgtgaggaaaaacctagatatatagaacgaagattttgcatgtaatgatagcgaataagaaaacaacttgagac 14980080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 7848392 - 7848282
Alignment:
Q  420 tctatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgt 519  Q
    ||||||||||||| |  |||||| ||  |||||||| ||| | ||| ||||||||||||||| | | ||||||||| ||| ||||  |||||||||||||    
T  7848392 tctatgatgatgatgtcagtggtgatgatttgtgtgcttgtattagagtcgtgcattttaggaggactcttgcattcataggtggaatatgtgactatgt 7848293  T
Q  520 gtttaagtgta 530  Q
    || || |||||    
T  7848292 gtatatgtgta 7848282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 8403659 - 8403709
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaata 401  Q
    |||||||||  | |||||||||||| |||||||||||||||||||||||||    
T  8403659 aatagatgatgggatagagtatgtctgtaagatgaataataaaataaaata 8403709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 9191283 - 9191229
Alignment:
Q  352 atagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||| | ||||||||    
T  9191283 atagacgagagaatagattatgtccataagatgaataataaaatcatatagaggg 9191229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 521
Target Start/End: Original strand, 21038032 - 21038104
Alignment:
Q  449 ttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||| ||| |||||||    
T  21038032 ttgtgtgcttgcattagagtcgtgcattttagtgagagtcttgcattaatatgtgaattatttgaatatgtgt 21038104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 14980132 - 14980182
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaata 401  Q
    ||||||||||||||||  |||||| ||||| | ||||||||||||||||||    
T  14980132 aatagatgagagaatattgtatgttcgtaaaaggaataataaaataaaata 14980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 25352429 - 25352537
Alignment:
Q  47 atgtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgtgcaggaaaggtgcaagaaaaagggtatcca 146  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||||| || || |||| ||||||||||||| | ||    
T  25352429 atgtgaaatctcatttttacccctgattttttaacaatattacaaaactaccatccacatagacatgtgtacaagagaggtacaagaaaaagggtgtaca 25352528  T
Q  147 tgaaacatt 155  Q
    | |||||||    
T  25352529 tcaaacatt 25352537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 15872579 - 15872673
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    |||||||||||| || |||||| |||||||| |||||  |||||||||||||  | |||||||||||||||||| |||| |||||||||||||||    
T  15872579 gaaagagttaatgacgatggtggggaagaacctagttggatagagaggagacattatatgtaatgataaagaattagaatacatcttgagactaa 15872673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 503
Target Start/End: Complemental strand, 9564241 - 9564155
Alignment:
Q  417 ttatctatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    |||||||||||||||| |||||| || ||  |||||||||||||| ||| ||||||||| ||||||| |||||| ||||||||||||    
T  9564241 ttatctatgatgatgatgagagttgtgatgatttgtgtgtttgcattagagtcgtgcatattagggggagtcttacattaatatgtg 9564155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 15890171 - 15890265
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    |||||||||||| || |||||| |||||||| |||||  |||||||||||||  | ||||||||||||| |||| |||| |||||||||||||||    
T  15890171 gaaagagttaatgacgatggtggggaagaacctagttgaatagagaggagacattatatgtaatgataatgaattagaatacatcttgagactaa 15890265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 11556318 - 11556227
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgaga 345  Q
    ||||||| |||||  ||||| ||||||||||| ||||||| ||| ||||  | | ||||||||||||||| |||||||||||||||||||||    
T  11556318 tgaaagatttaatggcaatgctgaggaagaacctagttatgtagggagggtaagttgtatgtaatgataatgaataagaaaacatcttgaga 11556227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 16284759 - 16284852
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagact 347  Q
    |||||||||||||  ||||||||||| ||||| ||||||| ||| ||||  | | ||||||||| ||||| ||||||||||| |||||||||||    
T  16284759 tgaaagagttaatggcaatggtgagggagaacctagttatgtagggagggaaagttgtatgtaacgataatgaataagaaaatatcttgagact 16284852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 12229282 - 12229192
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgaga 345  Q
    ||||| |||||| || |||||| |||||||| ||||| ||||||||||||||  |  | |||||||||| ||||||||| |||||||||||    
T  12229282 gaaagcgttaatgacgatggtgtggaagaacctagttgtatagagaggagacattacaggtaatgataatgaataagaatacatcttgaga 12229192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 512
Target Start/End: Complemental strand, 11936346 - 11936278
Alignment:
Q  444 atattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtg 512  Q
    |||||||||||| ||||| ||| ||||||||| |||||||  ||||| ||||||||||||| |||||||    
T  11936346 atattttgtgtgcttgcattagagtcgtgcatcttagggggtgtcttacattaatatgtggattatgtg 11936278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 17338078 - 17338003
Alignment:
Q  274 gtgaggaagaacttagttatatagagag--gagacgatgtatgtaatgataaagaataagaaaacatcttgagact 347  Q
    |||||||||||| |||||||||||||||  |||||| | |||||||| | || |||||||| ||||||||||||||    
T  17338078 gtgaggaagaacctagttatatagagagaggagacgttatatgtaatcaaaatgaataagagaacatcttgagact 17338003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 18231205 - 18231294
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagact 347  Q
    ||||||| |||||  ||||||||||||||||| ||||||| ||| |     | | ||||||||||||||| |||||||||||||||||||||||    
T  18231205 tgaaagaattaatggcaatggtgaggaagaacctagttatgtagggt----aagttgtatgtaatgataatgaataagaaaacatcttgagact 18231294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 6821357 - 6821294
Alignment:
Q  467 gtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgtttaagtgta 530  Q
    ||||||||||||||||| ||||||||||| ||| ||||  ||||||||||||||| || |||||    
T  6821357 gtcgtgcattttagggggagtcttgcattcataggtggaatatgtgactatgtgtatatgtgta 6821294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 16284906 - 16284956
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaata 401  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  16284906 aatagatgagagaatagagtacgtctgtgagatgaatactaaaataaaata 16284956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 422 - 503
Target Start/End: Original strand, 15873166 - 15873247
Alignment:
Q  422 tatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    ||||||||||| |||  || ||||  |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||    
T  15873166 tatgatgatgatgagtatgttaatgatttgtgtgcttgcattagagtcgtgcattttagtgagagtcttgcattaatatgtg 15873247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 18556782 - 18556834
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaataga 403  Q
    ||||||||||||||||| ||||||| || | ||| ||||||||||||||||||    
T  18556782 aatagatgagagaatagggtatgtctgtgatatggataataaaataaaataga 18556834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 12136899 - 12136853
Alignment:
Q  457 ttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    ||||| ||| |||||||||||||| || |||||||||||||||||||    
T  12136899 ttgcattagagtcgtgcattttagtgggagtcttgcattaatatgtg 12136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 402
Target Start/End: Complemental strand, 12229129 - 12229091
Alignment:
Q  364 atagagtatgtccgtaagatgaataataaaataaaatag 402  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  12229129 atagagtatgtatgtaagatgaataataaaataaaatag 12229091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 15872724 - 15872774
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaata 401  Q
    |||||||||  | |||||||||||| ||||||||||||||| |||||||||    
T  15872724 aatagatgaagggatagagtatgtcggtaagatgaataatataataaaata 15872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 15890316 - 15890366
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaata 401  Q
    |||||||||  | |||||||||||| ||||||||||||||| |||||||||    
T  15890316 aatagatgaagggatagagtatgtcggtaagatgaataatataataaaata 15890366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 406
Target Start/End: Complemental strand, 17337931 - 17337895
Alignment:
Q  370 tatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  17337931 tatgtctgtaagatgagtaataaaataaaatagaggg 17337895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 34279567 - 34279637
Alignment:
Q  46 catgtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  34279567 catgtgaaatctcatttttacccttaactttttaacaatactacaaaattgccatccacatgggcatgtgt 34279637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 5943814 - 5943869
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  5943814 aatagatgagaaaatagagtatgtccataagatgaataataaaataaaatagaggg 5943869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 16642686 - 16642595
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||  || |||||||||||  ||||||||||||| ||||||||    
T  16642686 gaaagagttaataacaattgtgaggaaaaacctagatatatagagcggagactttgcatgtaatgatagcgaataagaaaacaacttgagac 16642595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 14481350 - 14481444
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagacta 348  Q
    ||||||||||||| | ||||| |||| ||||| ||||||| ||| |||| || | ||||||||||||||| ||||| ||||||||||||||||||    
T  14481350 tgaaagagttaatgaaaatggagagggagaacctagttatgtagggaggggaagttgtatgtaatgataatgaataggaaaacatcttgagacta 14481444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 16359310 - 16359404
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    |||||||||||| || |||||| |||||||| |||||  |||||||||||||  | ||||||||||||| |||| |||| |||||||||||||||    
T  16359310 gaaagagttaatgacgatggtggggaagaacctagttggatagagaggagacattatatgtaatgataacgaattagaatacatcttgagactaa 16359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 14054778 - 14054869
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||| || ||  ||||||||||| ||  ||||||||||||| ||||||||    
T  14054778 gaaagagttaataacaattgtgaggaaaaacctaggtatatagagatgatactttgtatgtaatggtagcgaataagaaaacaacttgagac 14054869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 14062507 - 14062598
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||| ||||||||||| |||||||| ||| ||| || |||||||||||||  ||||||||||||||  ||||||||||| | ||||||||    
T  14062507 gaaagaattaataacaattgtgaggaaaaacctaggtagatagagaggagactttgtatgtaatgatagcgaataagaaaaaaacttgagac 14062598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 14481496 - 14481551
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  14481496 aatagatgagagaatagagtatgtctgtgagatgaataataaaataaaataaaggg 14481551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 13926595 - 13926663
Alignment:
Q  281 agaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    ||||| |||||  |||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||    
T  13926595 agaacctagttgcatagagaggagacgttatatgtaatgataatgaataagaatacatcttgagactaa 13926663  T

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Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 406
Target Start/End: Original strand, 13926725 - 13926772
Alignment:
Q  359 agagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  13926725 agagaatagagtatgtccataagatgattaataaaataaaatagaggg 13926772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 7237770 - 7237836
Alignment:
Q  50 tgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    |||||||||| ||||||||||   |||||||||| |||||||| |||||||||||||||||| ||||    
T  7237770 tgaaatctcaattttaccccttcctttttaacaaaattacaaagctgccatccacatgggcaggtgt 7237836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 4712526 - 4712617
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||  | |||   || |||||||||||  ||||||||||||| ||||||||    
T  4712526 gaaagagttaataacaattgtgaggaaaaacctagatatatagaacgaagattttgcatgtaatgatagcgaataagaaaacaacttgagac 4712617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 27870379 - 27870434
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||| ||||||||||||| || ||||  |||||||||||||||||||||    
T  27870379 aatagatgagaaaatagagtatgtctgtgagatagataataaaataaaatagaggg 27870434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 521
Target Start/End: Original strand, 16362890 - 16362963
Alignment:
Q  448 tttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||| ||| |||||||    
T  16362890 tttgtgtgcttgcattagagtcgtgcattttagtgagagtcttgcattaatatgtgaattatttgaatatgtgt 16362963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 17791275 - 17791186
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagacta 348  Q
    ||||||||||||| |||||||||||||||||| ||||||| | | | ||    ||| ||||||||||||| ||| ||||||||||||||| ||||    
T  17791275 tgaaagagttaatgacaatggtgaggaagaacctagttatgtggggggg----gat-tatgtaatgataatgaagaagaaaacatcttgacacta 17791186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 19099715 - 19099626
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagacta 348  Q
    ||||||||||||| |||||||||||||||||| ||||||| | | | ||    ||| ||||||||||||| ||| ||||||||||||||| ||||    
T  19099715 tgaaagagttaatgacaatggtgaggaagaacctagttatgtggggggg----gat-tatgtaatgataatgaagaagaaaacatcttgacacta 19099626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 521
Target Start/End: Complemental strand, 21975056 - 21974983
Alignment:
Q  448 tttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||| ||| |||||||    
T  21975056 tttgtgtgcttgcattagagtcgtgcattttagtgagagtcttgcattaatatgtgaattatttgaatatgtgt 21974983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 21975447 - 21975390
Alignment:
Q  349 aaaatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||  | ||||||||||||  ||| |||||||||||||||||||||||||    
T  21975447 aaaatagatgatgggatagagtatgtctataaaatgaataataaaataaaatagaggg 21975390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 521
Target Start/End: Complemental strand, 21997487 - 21997414
Alignment:
Q  448 tttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||| ||| |||||||    
T  21997487 tttgtgtgcttgcattagagtcgtgcattttagtgagagtcttgcattaatatgtgaattatttgaatatgtgt 21997414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 21997878 - 21997821
Alignment:
Q  349 aaaatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||  | ||||||||||||  ||| |||||||||||||||||||||||||    
T  21997878 aaaatagatgatgggatagagtatgtctataaaatgaataataaaataaaatagaggg 21997821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 37508248 - 37508321
Alignment:
Q  43 ggacatgtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    ||||||||||||||||| |||| |||||   | || ||| | ||||||||||||||||||||||||||| ||||    
T  37508248 ggacatgtgaaatctcaattttgcccctgcatgttcaacgaaattacaaaactgccatccacatgggcaggtgt 37508321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 5943685 - 5943729
Alignment:
Q  253 ttgaaagagttaataacaatggtgaggaagaacttagttatatag 297  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||    
T  5943685 ttgaaagagttaatgacaatggtgaggaagaaccaagttatatag 5943729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 16642543 - 16642488
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  16642543 aatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaatataggg 16642488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 503
Target Start/End: Complemental strand, 22159609 - 22159558
Alignment:
Q  452 tgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    |||||||||| ||| |||||||||||||| |  |||||||||||||||||||    
T  22159609 tgtgtttgcattagagtcgtgcattttagtgagagtcttgcattaatatgtg 22159558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 4712669 - 4712719
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaata 401  Q
    ||||||||||||||||  |||||| ||||| | ||||||||||||||||||    
T  4712669 aatagatgagagaatattgtatgttcgtaaaaggaataataaaataaaata 4712719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 521
Target Start/End: Original strand, 13927154 - 13927226
Alignment:
Q  449 ttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    ||||||| ||||| ||| || ||||||||||| || ||||||||| |||||||||  |||| ||| |||||||    
T  13927154 ttgtgtgcttgcattagagttgtgcattttagtgggagtcttgcactaatatgtgaattatttgaatatgtgt 13927226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 51940818 - 51940774
Alignment:
Q  73 ttttttaacaatattacaaaactgccatccacatgggcatgtgtg 117  Q
    |||||| ||||  |||||||||||||||||||||||||| |||||    
T  51940818 ttttttgacaaatttacaaaactgccatccacatgggcaagtgtg 51940774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 8726164 - 8726231
Alignment:
Q  49 gtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    |||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  8726164 gtgaaatctcatttttacccttaactttttaacaatactacaaaattgccatccacatgggcatgtgt 8726231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 31698356 - 31698289
Alignment:
Q  49 gtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    |||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||||||||||||||||    
T  31698356 gtgaaatctcatttttacccttaactttttaacaacactacaaaattgccatccacatgggcatgtgt 31698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 503
Target Start/End: Complemental strand, 24757469 - 24757389
Alignment:
Q  423 atgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    |||||| ||| | |||||||||| ||||||||  ||||||||| ||||||||||||||||  |||||||||||||||||||    
T  24757469 atgatggtgaagggagtggtaatgttttgtgttcttgcaatagagtcgtgcattttagggagagtcttgcattaatatgtg 24757389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 13936102 - 13936008
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    |||||||||||| || |||||| |||||||| ||||| |||||| |||||||| | ||||||||||||| ||||| |||  ||||| ||||||||    
T  13936102 gaaagagttaatgacgatggtggggaagaacctagttgtatagaaaggagacgttatatgtaatgataatgaatacgaattcatctcgagactaa 13936008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 23960791 - 23960847
Alignment:
Q  350 aaatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||| |||||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  23960791 aaattgatgagggaatagagtatgtccgtaagatgaatgataaaacaaaatagaggg 23960847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 503
Target Start/End: Complemental strand, 24615309 - 24615229
Alignment:
Q  423 atgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    |||||| ||| | |||||||||| ||||||||  ||||||||| |||||||||||||| |  |||||||||||||||||||    
T  24615309 atgatggtgaagggagtggtaatgttttgtgttcttgcaatagagtcgtgcattttagagagagtcttgcattaatatgtg 24615229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 503
Target Start/End: Complemental strand, 24711707 - 24711627
Alignment:
Q  423 atgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    |||||| ||| | |||||||||| ||||||||  ||||||||| |||||||||||||| |  |||||||||||||||||||    
T  24711707 atgatggtgaagggagtggtaatgttttgtgttcttgcaatagagtcgtgcattttagagagagtcttgcattaatatgtg 24711627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 503
Target Start/End: Complemental strand, 24744703 - 24744623
Alignment:
Q  423 atgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    |||||| ||| | |||||||||| ||||||||  ||||||||| |||||||||||||| |  |||||||||||||||||||    
T  24744703 atgatggtgaagggagtggtaatgttttgtgttcttgcaatagagtcgtgcattttagagagagtcttgcattaatatgtg 24744623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 24831896 - 24831951
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||||| ||||    
T  24831896 aatagaagagagaatagagtatgtctgtgagatgaataataaaataaaataaaggg 24831951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 42838201 - 42838134
Alignment:
Q  49 gtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    ||||||||||| ||||||||||   |||||||||| |||||||| |||||||||||||||||| ||||    
T  42838201 gtgaaatctcaattttaccccttcctttttaacaaaattacaaagctgccatccacatgggcaggtgt 42838134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 521
Target Start/End: Complemental strand, 13935597 - 13935498
Alignment:
Q  422 tatgatgatgaggagagtggtaatattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    ||||||||||| |||||||||  |  |||||||| ||||  ||  || ||| ||||||||| |||| |||||||||||||||| |||||||||| |||||    
T  13935597 tatgatgatgatgagagtggtggtgatttgtgtgcttgccttacagttgtggattttagggaaagttttgcattaatatgtggattatgtgactttgtgt 13935498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 24615672 - 24615617
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||    
T  24615672 aatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagaggg 24615617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 24712070 - 24712015
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||    
T  24712070 aatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagaggg 24712015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 24745066 - 24745011
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||    
T  24745066 aatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagaggg 24745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 24757832 - 24757777
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||    
T  24757832 aatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagaggg 24757777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 13935951 - 13935904
Alignment:
Q  357 tgagagaatagagtatgtccgtaagatgaataataaaataaaatagag 404  Q
    |||||||||| |||||||||||||  ||| ||||||||||||||||||    
T  13935951 tgagagaataaagtatgtccgtaaagtgattaataaaataaaatagag 13935904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 17458326 - 17458275
Alignment:
Q  256 aaagagttaataacaatggtgaggaagaacttagttatatagagaggagacg 307  Q
    ||||||||||| || ||||||||| ||||| ||||| |||||||||||||||    
T  17458326 aaagagttaatgacgatggtgagggagaacctagttgtatagagaggagacg 17458275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 24831749 - 24831844
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataag-aaaacatcttgagacta 348  Q
    ||||||||||||| | ||||| |||  ||||| ||||||| ||| |||| || | ||||||||||||||| ||||| | |||| ||||||||||||    
T  24831749 tgaaagagttaatgaaaatggagagagagaacctagttatgtagggaggggaagttgtatgtaatgataatgaataggaaaaatatcttgagacta 24831844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 6e-20; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 29294254 - 29294160
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagacta 348  Q
    ||||||||||||| || ||||||||| ||||| ||||||| ||| ||||  | | ||||||||||||||| ||||||||||||||||||||||||    
T  29294254 tgaaagagttaatgactatggtgagggagaacctagttatgtagggagggaaagttgtatgtaatgataatgaataagaaaacatcttgagacta 29294160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 23658923 - 23658833
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgaga 345  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||  || |||||||||||  ||||||||||| | |||||||    
T  23658923 gaaagagttaataacaattgtgaggaaaaacctagatatatagagcggagactttgcatgtaatgatagtgaataagaaaagaacttgaga 23658833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 29294108 - 29294053
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||    
T  29294108 aatagatgagaaaatagagtatgcccataaaatgaataataaaataaaataaaggg 29294053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 23658780 - 23658725
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  23658780 aatagatgagagaataatgtatgttcgtaaaatgaatagtaaaataaaatataggg 23658725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 15867004 - 15867095
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||||||||||  ||||| ||||||||  |||||| |||||| ||||||||    
T  15867004 gaaagagttaataacaattgtgaggaaaaacctaggtatatagagaggagactttgtatataatgatagcgaataaaaaaacaacttgagac 15867095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 513
Target Start/End: Original strand, 22614921 - 22615021
Alignment:
Q  416 tttatctatgatgatgaggagagtggtaata---ttttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtg 512  Q
    ||||||||||||||||| ||||||||| ||    ||||||||| ||||| ||| ||||||||||||| ||||| |||||||||||||||||  |||||||    
T  22614921 tttatctatgatgatgatgagagtggtgatgatgttttgtgtgcttgcattagagtcgtgcattttatgggaaatcttgcattaatatgtgaattatgtg 22615020  T
Q  513 a 513  Q
    |    
T  22615021 a 22615021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 16060902 - 16060810
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaa-cttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    ||||||||||||||||||||||||||| || | ||| ||||||||| ||||||  || |||||||||||  ||||||||||||| ||||||||    
T  16060902 gaaagagttaataacaatggtgaggaaaaaacctagatatatagagcggagactttgcatgtaatgatagcgaataagaaaacaacttgagac 16060810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 405
Target Start/End: Original strand, 37945692 - 37945746
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagagg 405  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  37945692 aatagatgcgagaacagagtatgtccgtaagatgaataataaattaaaatagagg 37945746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 20026229 - 20026174
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||| |||| ||||    
T  20026229 aatagatgagagaatatagtacgtctgtaagatgaataataaaatagaataaaggg 20026174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 24768422 - 24768355
Alignment:
Q  49 gtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    ||||||||||| ||||||| ||   |||||||||| |||||||| |||||||||||||||||| ||||    
T  24768422 gtgaaatctcaattttacctcttcctttttaacaaaattacaaagctgccatccacatgggcaggtgt 24768355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 254 - 349
Target Start/End: Original strand, 37945547 - 37945641
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||||| ||||||||| | || || |||| || |||||||| |||||| |||||||||    
T  37945547 tgaaagagttaatgatgatggtgaggaagaacctagttgtatagggaggagacgttatacgt-atgaaaacgaataagagaacatcgtgagactaa 37945641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 4531496 - 4531574
Alignment:
Q  270 aatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagacta 348  Q
    ||||||||||||||||||||| || ||| |||  || | ||||||||||||||| |||||| |||  ||||||||||||    
T  4531496 aatggtgaggaagaacttagtcatgtagggagtggaagttgtatgtaatgataatgaataacaaattatcttgagacta 4531574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 513
Target Start/End: Complemental strand, 11655411 - 11655311
Alignment:
Q  416 tttatctatgatgatgaggagagtggtaata---ttttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtg 512  Q
    ||||||||||||||||| ||||||||| ||    |||| |||| ||||| ||| ||||||||||||| || || |||||||||| ||||||  |||||||    
T  11655411 tttatctatgatgatgatgagagtggtgatgatgttttttgtgcttgcattagagtcgtgcattttatggaaaatcttgcattagtatgtgaattatgtg 11655312  T
Q  513 a 513  Q
    |    
T  11655311 a 11655311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 416 - 511
Target Start/End: Original strand, 13477664 - 13477763
Alignment:
Q  416 tttatctatgatgatgaggagagtggtaa---tattttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgca-ttaatatgtgggttatgt 511  Q
    ||||||||||||||||| ||||||||| |   | ||||||||| |||||  || ||||| ||||||||||| |  |||||| ||||||||||||||||||    
T  13477664 tttatctatgatgatgatgagagtggtgatggtgttttgtgtgcttgcatcagagtcgttcattttagggggatacttgcatttaatatgtgggttatgt 13477763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 36962953 - 36963026
Alignment:
Q  43 ggacatgtgaaatctcatttttacccctaattttttaacaatattacaaaactgccatccacatgggcatgtgt 116  Q
    ||||||||||||||||| |||| |||||   | |||||| | |||||||||||| |||||||||||||| ||||    
T  36962953 ggacatgtgaaatctcaattttgcccctgcctgtttaacgaaattacaaaactgtcatccacatgggcaggtgt 36963026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 16060758 - 16060703
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  16060758 aatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaatataggg 16060703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 48377033 - 48376978
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  48377033 aatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaatataggg 48376978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 13881983 - 13882074
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||  || |||||||||||  ||||||||||||| ||||||||    
T  13881983 gaaagagttaataacaattgtgaggaaaaacctagatatatagagcggagactttgcatgtaatgatagcgaataagaaaacaacttgagac 13882074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 51626720 - 51626800
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaa 335  Q
    ||||||||| |||| ||| |||||||| ||| ||| ||||||||||||||||  ||||||||||||||  |||||||||||    
T  51626720 gaaagagttgataagaattgtgaggaaaaacctaggtatatagagaggagactttgtatgtaatgatagcgaataagaaaa 51626800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 1566937 - 1566984
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaa 398  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  1566937 aatagaagagagaataaagtatgtccgtaaaatgaataataaaataaa 1566984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 15542055 - 15541993
Alignment:
Q  287 tagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    ||||||||||||||||||| | | |||||||| | || |||||||| ||||||||||||||||    
T  15542055 tagttatatagagaggagatgttatatgtaataaaaatgaataagataacatcttgagactaa 15541993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 13882126 - 13882181
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  13882126 aatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaatataggg 13882181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 1566836 - 1566886
Alignment:
Q  299 gaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    |||| |||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  1566836 gaggggacgttgtatgtaatggtaatgaataagaaagcatcttgagactaa 1566886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 15541252 - 15541198
Alignment:
Q  467 gtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    ||||||||||||||||| | ||||  |||||||||||| ||||||||||| ||||    
T  15541252 gtcgtgcattttagggggactcttcaattaatatgtggattatgtgactaggtgt 15541198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 406
Target Start/End: Complemental strand, 15541943 - 15541899
Alignment:
Q  362 gaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||| ||||| |||||||||||| | ||||||||    
T  15541943 gaatagagtatgtccataagaagaataataaaatgacatagaggg 15541899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 3393 - 3487
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagacta 348  Q
    |||||||||||||   |||||||||||||||| ||||||| ||| |||| || | ||||||||||||||| |||| |||||||||||||| ||||    
T  3393 tgaaagagttaatggaaatggtgaggaagaacctagttatgtagggaggggaagttgtatgtaatgataatgaatgagaaaacatcttgacacta 3487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 3930 - 3985
Alignment:
Q  448 tttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtg 503  Q
    |||||||| ||||| ||| |||||||||||||| || |||||| ||||||||||||    
T  3930 tttgtgtgcttgcattagagtcgtgcattttagtgggagtcttacattaatatgtg 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 407
Target Start/End: Original strand, 3547 - 3595
Alignment:
Q  359 agagaatagagtatgtccgtaagatgaataataaaataaaatagagggg 407  Q
    ||||||||||||||| || ||| || ||||||||||||||||| |||||    
T  3547 agagaatagagtatgcccataaaataaataataaaataaaatatagggg 3595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1269 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold1269
Description:

Target: scaffold1269; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 365 - 276
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    ||||||||||||||||||  ||||||| |||  || ||||||||||||||||  ||||||||||||||  ||||||||||||| ||||||||    
T  365 gaaagagttaataacaat--tgaggaaaaaccaaggtatatagagaggagactttgtatgtaatgatagcgaataagaaaacaacttgagac 276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1269; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 224 - 169
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  224 aatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaatataggg 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 13296 - 13387
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||  |||||  || |||||||||||  ||||||||||||| ||||||||    
T  13296 gaaagagttaataacaattgtgaggaaaaacctagatatatagagcagagactttgcatgtaatgatagcgaataagaaaacaacttgagac 13387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 13439 - 13494
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  13439 aatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaatataggg 13494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 14766 - 14675
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||| ||||||||||||| |||||||| ||| ||| ||||||||| ||||||  || |||||||||||  ||||||||||||| ||||||||    
T  14766 gaaacagttaataacaattgtgaggaaaaacctagatatatagagtggagactttgcatgtaatgatagcgaataagaaaacaacttgagac 14675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 131171 - 131080
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagac 346  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||| |||||   || |||||||||||  ||||||||||||| ||||||||    
T  131171 gaaagagttaataacaattgtgaggaaaaacctagatatatagagcggagagtttgcatgtaatgatagcgaataagaaaacaacttgagac 131080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 131028 - 130973
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    ||||||||||||||||  |||||| ||||| ||||||| |||||||||||| ||||    
T  131028 aatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaatataggg 130973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 12958 - 12865
Alignment:
Q  254 tgaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagact 347  Q
    |||||||||||||  ||||||||||| ||||| ||||||| ||| ||||  | | ||||||||| ||||| ||||||||||| |||||||||||    
T  12958 tgaaagagttaatggcaatggtgagggagaacctagttatgtagggagggaaagttgtatgtaacgataatgaataagaaaatatcttgagact 12865  T

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Target: scaffold0145; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 401
Target Start/End: Complemental strand, 12811 - 12761
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaata 401  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  12811 aatagatgagagaatagagtacgtctgtgagatgaatactaaaataaaata 12761  T

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Target: scaffold0091 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 29447 - 29367
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaa 335  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||  || |||||||||||  |||||||||||    
T  29447 gaaagagttaataacaattgtgaggaaaaacctagatatatagagcggagactttgcatgtaatgatagcgaataagaaaa 29367  T

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Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 311 - 256
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||    
T  311 aatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagaggg 256  T

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Target: scaffold0094 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 4569 - 4624
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagaggg 406  Q
    |||||||||||||||||  |||||| || ||||| |||||||||||||||||||||    
T  4569 aatagatgagagaataggatatgtctgtgagatggataataaaataaaatagaggg 4624  T

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Target: scaffold1001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 513
Target Start/End: Complemental strand, 1326 - 1226
Alignment:
Q  416 tttatctatgatgatgaggagagtggtaatatt---ttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtg 512  Q
    ||||||||||||||||| ||||||||| || ||   ||||||| ||||| ||  ||| ||||||||||||||| ||||| |||| | ||||| |||||||    
T  1326 tttatctatgatgatgatgagagtggtgatgttgttttgtgtgcttgcattatagtcatgcattttaggggaaatcttgtattagtctgtggattatgtg 1227  T
Q  513 a 513  Q
    |    
T  1226 a 1226  T

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Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 405
Target Start/End: Original strand, 13973 - 14027
Alignment:
Q  351 aatagatgagagaatagagtatgtccgtaagatgaataataaaataaaatagagg 405  Q
    ||||||||||| ||||||||||||| || ||||  ||||||||||||||||||||    
T  13973 aatagatgagaaaatagagtatgtctgtgagatagataataaaataaaatagagg 14027  T

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Target: scaffold0385 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 14609 - 14515
Alignment:
Q  255 gaaagagttaataacaatggtgaggaagaacttagttatatagagaggagacgatgtatgtaatgataaagaataagaaaacatcttgagactaa 349  Q
    ||||||||||||||| |||||| |||||||| ||| | | ||||| ||| ||  | ||||||||||| | |||| | || |||||||||||||||    
T  14609 gaaagagttaataacgatggtggggaagaacctaggtgtctagaggggaaacattatatgtaatgatgacgaattacaatacatcttgagactaa 14515  T

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Target: scaffold0385; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 521
Target Start/End: Complemental strand, 14045 - 13972
Alignment:
Q  448 tttgtgtgtttgcaatagtgtcgtgcattttaggggaagtcttgcattaatatgtgggttatgtgactatgtgt 521  Q
    |||||||| ||||| ||| |||||||||||||| |  |||||| ||||||||||||  |||| ||| |||||||    
T  14045 tttgtgtgcttgcattagagtcgtgcattttagtgagagtcttccattaatatgtgaattatttgaatatgtgt 13972  T

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