View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1633_high_10 (Length: 494)

Name: NF1633_high_10
Description: NF1633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1633_high_10
NF1633_high_10
[»] chr1 (44 HSPs)
chr1 (1-253)||(31574066-31574318)
chr1 (332-483)||(31574397-31574549)
chr1 (377-466)||(42512765-42512855)
chr1 (350-447)||(6029316-6029413)
chr1 (350-472)||(16451189-16451312)
chr1 (377-466)||(7837222-7837312)
chr1 (377-441)||(8780626-8780690)
chr1 (368-447)||(15539905-15539984)
chr1 (368-447)||(42510605-42510684)
chr1 (377-447)||(17888037-17888107)
chr1 (377-447)||(28340318-28340388)
chr1 (365-447)||(35335777-35335859)
chr1 (377-447)||(50304740-50304810)
chr1 (350-466)||(31004194-31004311)
chr1 (350-447)||(45490890-45490987)
chr1 (350-447)||(51264557-51264654)
chr1 (387-466)||(16704825-16704905)
chr1 (350-476)||(26118200-26118327)
chr1 (368-447)||(41972991-41973070)
chr1 (350-445)||(45658883-45658978)
chr1 (377-466)||(6143981-6144071)
chr1 (377-447)||(8838986-8839056)
chr1 (377-447)||(41967864-41967934)
chr1 (377-447)||(49303369-49303439)
chr1 (350-447)||(1351450-1351547)
chr1 (386-447)||(5109826-5109887)
chr1 (368-472)||(11772621-11772726)
chr1 (350-466)||(13994070-13994187)
chr1 (350-443)||(17327668-17327761)
chr1 (380-472)||(26733647-26733740)
chr1 (365-464)||(504388-504488)
chr1 (377-464)||(7837463-7837551)
chr1 (368-447)||(844739-844818)
chr1 (368-447)||(6711061-6711140)
chr1 (368-447)||(16386934-16387013)
chr1 (368-447)||(24339653-24339732)
chr1 (368-447)||(30105695-30105774)
chr1 (368-447)||(32270433-32270512)
chr1 (368-447)||(32289359-32289438)
chr1 (368-447)||(35387326-35387405)
chr1 (377-447)||(7184007-7184077)
chr1 (365-441)||(15324229-15324306)
chr1 (368-476)||(39281974-39282083)
chr1 (402-447)||(42705252-42705297)
[»] chr8 (32 HSPs)
chr8 (377-476)||(29610980-29611080)
chr8 (390-476)||(9624310-9624396)
chr8 (377-466)||(7591382-7591472)
chr8 (350-466)||(15001519-15001636)
chr8 (368-476)||(40389111-40389220)
chr8 (377-447)||(22999338-22999408)
chr8 (377-466)||(41548698-41548788)
chr8 (368-447)||(27104030-27104109)
chr8 (350-476)||(30542947-30543074)
chr8 (350-476)||(39642936-39643063)
chr8 (377-447)||(10467144-10467214)
chr8 (377-447)||(37474780-37474850)
chr8 (350-447)||(8673010-8673107)
chr8 (387-447)||(30501235-30501295)
chr8 (368-447)||(37861930-37862009)
chr8 (350-447)||(29563181-29563278)
chr8 (350-447)||(37618347-37618444)
chr8 (377-476)||(18354907-18355006)
chr8 (411-471)||(39061417-39061477)
chr8 (368-447)||(4052551-4052630)
chr8 (368-447)||(34101579-34101658)
chr8 (368-447)||(37664238-37664317)
chr8 (368-447)||(41709848-41709927)
chr8 (377-447)||(14004999-14005069)
chr8 (369-466)||(22756346-22756444)
chr8 (377-443)||(25478323-25478389)
chr8 (377-447)||(34063208-34063278)
chr8 (377-447)||(35225742-35225812)
chr8 (377-447)||(45446535-45446605)
chr8 (350-447)||(29672278-29672375)
chr8 (412-472)||(45114170-45114231)
chr8 (368-436)||(7394780-7394848)
[»] chr4 (50 HSPs)
chr4 (368-466)||(50729455-50729554)
chr4 (365-469)||(9948000-9948105)
chr4 (368-447)||(26083413-26083492)
chr4 (377-466)||(50178405-50178495)
chr4 (350-447)||(37865809-37865906)
chr4 (368-476)||(39078735-39078844)
chr4 (368-447)||(36497291-36497370)
chr4 (377-448)||(44649096-44649167)
chr4 (377-466)||(11056125-11056215)
chr4 (359-447)||(20517955-20518043)
chr4 (368-447)||(3649710-3649789)
chr4 (368-447)||(20802464-20802543)
chr4 (368-447)||(36886006-36886085)
chr4 (377-443)||(52949803-52949869)
chr4 (350-447)||(33176965-33177062)
chr4 (350-447)||(38812576-38812673)
chr4 (368-447)||(4325865-4325944)
chr4 (368-447)||(29785470-29785549)
chr4 (368-447)||(38486190-38486269)
chr4 (377-447)||(29592978-29593048)
chr4 (377-447)||(46680443-46680513)
chr4 (377-447)||(47642424-47642494)
chr4 (350-447)||(55065265-55065363)
chr4 (386-447)||(7554890-7554951)
chr4 (386-447)||(21202831-21202892)
chr4 (386-447)||(24210411-24210472)
chr4 (368-476)||(44324245-44324354)
chr4 (350-443)||(49152037-49152130)
chr4 (377-472)||(9807238-9807334)
chr4 (368-447)||(30942862-30942942)
chr4 (365-417)||(52673882-52673934)
chr4 (368-447)||(1231385-1231464)
chr4 (368-447)||(2629884-2629963)
chr4 (368-447)||(21580100-21580179)
chr4 (368-447)||(24002413-24002492)
chr4 (388-447)||(36743621-36743680)
chr4 (388-466)||(44640417-44640496)
chr4 (380-466)||(47666961-47667048)
chr4 (368-447)||(52319397-52319476)
chr4 (368-447)||(53200576-53200655)
chr4 (371-469)||(55996845-55996944)
chr4 (377-447)||(9512273-9512343)
chr4 (377-447)||(12600969-12601039)
chr4 (377-447)||(34929998-34930068)
chr4 (377-447)||(50727846-50727916)
chr4 (377-447)||(50735860-50735930)
chr4 (350-447)||(23521936-23522033)
chr4 (368-472)||(32181337-32181442)
chr4 (386-447)||(55593977-55594038)
chr4 (411-474)||(47741386-47741450)
[»] chr2 (31 HSPs)
chr2 (368-483)||(6896239-6896355)
chr2 (368-447)||(41366050-41366129)
chr2 (365-447)||(44284697-44284779)
chr2 (350-447)||(8112353-8112450)
chr2 (350-447)||(32766444-32766541)
chr2 (368-476)||(38623214-38623323)
chr2 (350-477)||(40832378-40832506)
chr2 (350-447)||(9732870-9732967)
chr2 (350-447)||(37308708-37308805)
chr2 (386-443)||(40692386-40692443)
chr2 (368-483)||(30712931-30713047)
chr2 (368-447)||(5278774-5278853)
chr2 (368-447)||(7258968-7259047)
chr2 (368-447)||(18685907-18685986)
chr2 (377-447)||(33366690-33366760)
chr2 (377-447)||(34338890-34338960)
chr2 (368-476)||(28824467-28824576)
chr2 (350-447)||(42706412-42706509)
chr2 (377-476)||(22979914-22980014)
chr2 (368-447)||(7761513-7761592)
chr2 (368-447)||(17540786-17540865)
chr2 (368-447)||(35114856-35114935)
chr2 (388-447)||(39461405-39461464)
chr2 (377-447)||(32497995-32498065)
chr2 (377-447)||(38993011-38993081)
chr2 (377-447)||(42365657-42365727)
chr2 (386-447)||(3913400-3913461)
chr2 (366-447)||(22063731-22063811)
chr2 (386-447)||(30326272-30326333)
chr2 (407-447)||(2086173-2086213)
chr2 (407-447)||(4641624-4641664)
[»] chr3 (33 HSPs)
chr3 (368-447)||(3867583-3867662)
chr3 (368-466)||(19906834-19906933)
chr3 (377-476)||(31882926-31883026)
chr3 (384-466)||(41682967-41683050)
chr3 (377-466)||(33364692-33364782)
chr3 (377-447)||(50386390-50386460)
chr3 (368-472)||(12349079-12349184)
chr3 (350-447)||(49748845-49748942)
chr3 (368-447)||(24571353-24571432)
chr3 (368-447)||(25860355-25860434)
chr3 (368-447)||(40094575-40094654)
chr3 (350-447)||(29584929-29585026)
chr3 (350-447)||(39052772-39052869)
chr3 (368-447)||(34026739-34026818)
chr3 (368-447)||(51259714-51259793)
chr3 (377-447)||(3864609-3864679)
chr3 (377-447)||(10747281-10747351)
chr3 (376-446)||(39215404-39215474)
chr3 (365-465)||(17264587-17264688)
chr3 (350-474)||(21373984-21374109)
chr3 (378-447)||(24721567-24721636)
chr3 (350-447)||(28675844-28675941)
chr3 (350-447)||(50678852-50678949)
chr3 (350-443)||(51925146-51925239)
chr3 (380-483)||(26847411-26847515)
chr3 (368-466)||(3964360-3964459)
chr3 (368-447)||(20255116-20255195)
chr3 (368-447)||(20609582-20609661)
chr3 (377-447)||(44117020-44117090)
chr3 (386-447)||(3695241-3695302)
chr3 (350-447)||(21221295-21221391)
chr3 (389-446)||(22484678-22484735)
chr3 (366-395)||(45605624-45605653)
[»] chr6 (27 HSPs)
chr6 (350-447)||(34176883-34176980)
chr6 (350-447)||(3259736-3259833)
chr6 (368-447)||(11675353-11675432)
chr6 (368-447)||(32409831-32409910)
chr6 (386-447)||(11212346-11212407)
chr6 (350-447)||(18597137-18597234)
chr6 (350-447)||(32132359-32132456)
chr6 (389-464)||(9614066-9614142)
chr6 (368-447)||(3379781-3379860)
chr6 (368-447)||(3932786-3932865)
chr6 (368-447)||(15276916-15276995)
chr6 (368-447)||(24203433-24203512)
chr6 (377-447)||(10485237-10485307)
chr6 (377-447)||(32860131-32860201)
chr6 (350-447)||(166902-166999)
chr6 (368-472)||(14925409-14925514)
chr6 (350-472)||(31870050-31870176)
chr6 (388-447)||(8177861-8177920)
chr6 (372-443)||(11382137-11382208)
chr6 (368-447)||(11613770-11613849)
chr6 (368-447)||(24242735-24242814)
chr6 (377-447)||(10960080-10960150)
chr6 (377-447)||(17867915-17867985)
chr6 (377-447)||(17877698-17877768)
chr6 (377-447)||(29054436-29054506)
chr6 (350-443)||(10324094-10324187)
chr6 (350-447)||(11279181-11279278)
[»] chr7 (27 HSPs)
chr7 (368-447)||(329545-329624)
chr7 (377-447)||(38301426-38301496)
chr7 (377-443)||(48445605-48445671)
chr7 (350-447)||(21784928-21785025)
chr7 (368-447)||(47953265-47953344)
chr7 (350-447)||(1870192-1870289)
chr7 (350-447)||(40753212-40753309)
chr7 (368-447)||(10932498-10932577)
chr7 (390-476)||(21408538-21408625)
chr7 (368-447)||(41211141-41211220)
chr7 (377-466)||(1363720-1363810)
chr7 (377-447)||(43158627-43158697)
chr7 (377-447)||(43368285-43368355)
chr7 (350-447)||(22724472-22724569)
chr7 (350-447)||(47316639-47316736)
chr7 (368-447)||(18470759-18470836)
chr7 (368-447)||(26994166-26994245)
chr7 (368-447)||(36769510-36769589)
chr7 (368-447)||(44748770-44748849)
chr7 (377-443)||(3922648-3922714)
chr7 (389-447)||(18386620-18386678)
chr7 (402-448)||(46627267-46627313)
chr7 (368-476)||(11321796-11321905)
chr7 (350-447)||(11822280-11822377)
chr7 (350-447)||(26371750-26371847)
chr7 (388-476)||(26700572-26700661)
chr7 (350-447)||(43189183-43189280)
[»] chr5 (26 HSPs)
chr5 (350-476)||(4689614-4689741)
chr5 (350-476)||(31770507-31770634)
chr5 (350-476)||(32528768-32528895)
chr5 (377-447)||(18470374-18470444)
chr5 (377-447)||(37148535-37148605)
chr5 (368-447)||(11963412-11963491)
chr5 (368-447)||(28090466-28090545)
chr5 (350-447)||(553450-553547)
chr5 (368-447)||(4818086-4818165)
chr5 (368-447)||(7523243-7523322)
chr5 (368-447)||(21739107-21739186)
chr5 (368-447)||(24181570-24181649)
chr5 (368-447)||(39918578-39918657)
chr5 (377-447)||(22432255-22432325)
chr5 (350-447)||(8136890-8136987)
chr5 (368-476)||(34794958-34795067)
chr5 (350-447)||(40489390-40489487)
chr5 (368-447)||(31880022-31880101)
chr5 (368-447)||(35701348-35701427)
chr5 (377-447)||(5598560-5598630)
chr5 (377-466)||(7725735-7725825)
chr5 (377-447)||(23091250-23091320)
chr5 (388-469)||(26180217-26180299)
chr5 (377-447)||(32092928-32092998)
chr5 (377-476)||(3735437-3735537)
chr5 (387-447)||(7770225-7770285)
[»] scaffold0050 (1 HSPs)
scaffold0050 (350-447)||(42896-42993)
[»] scaffold0280 (1 HSPs)
scaffold0280 (368-447)||(13633-13712)
[»] scaffold0025 (1 HSPs)
scaffold0025 (388-466)||(5365-5444)
[»] scaffold0004 (1 HSPs)
scaffold0004 (368-447)||(372910-372989)
[»] scaffold0650 (1 HSPs)
scaffold0650 (350-447)||(1589-1686)
[»] scaffold0054 (2 HSPs)
scaffold0054 (377-447)||(23655-23725)
scaffold0054 (365-472)||(19975-20083)
[»] scaffold0047 (1 HSPs)
scaffold0047 (377-447)||(19102-19172)
[»] scaffold0027 (1 HSPs)
scaffold0027 (377-447)||(15252-15322)
[»] scaffold0169 (1 HSPs)
scaffold0169 (350-447)||(18000-18097)
[»] scaffold0208 (1 HSPs)
scaffold0208 (368-447)||(2284-2363)
[»] scaffold0098 (1 HSPs)
scaffold0098 (368-447)||(51509-51588)
[»] scaffold0957 (1 HSPs)
scaffold0957 (386-447)||(2442-2503)
[»] scaffold0360 (1 HSPs)
scaffold0360 (365-417)||(13555-13607)


Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 31574066 - 31574318
Alignment:
Q  1 ataaaaatataatatgatgatgttgtttattgtacacaacttaagtttgtgtcaatgatacacaaacggttgattattgttgccatagaaacctaaacta 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31574066 ataaaaatataatatgatgatgttgtttattgcacacaacttaagtttgtgtcaatgatacacaaacggttgattattgttgccatagaaacctaaacta 31574165  T
Q  101 tttggtggcatttagttatttttgaatagtgatagtataaaaacttatctcatagactgagattaagttagtgattgtttattgagcttttcatcatttt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31574166 tttggtggcatttagttatttttgaatagtgatagtataaaaacttatctcatagactgagattaagttaatgattgtttattgagcttttcatcatttt 31574265  T
Q  201 aatacgctaaacggtaagcacactagaacagcacaagataaaataacaaaaga 253  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  31574266 aatacgctaaacggtaagcgcactagaacaacacaagataaaataataaaaga 31574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 332 - 483
Target Start/End: Original strand, 31574397 - 31574549
Alignment:
Q  332 aacttgtatataggacac-aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaa 430  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||||||  |||||    
T  31574397 aacttgtatataggacaataagttgcgttgtgaattagtgagagatacaaattttagtttttgtcatgtttcttatctccagtttgttttgtttttgaaa 31574496  T
Q  431 cagtttcacaaatcaaaattgtacaactgaagttgtcatgtcatgtgtttcat 483  Q
     ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  31574497 tagttttacaaatcaaaattgtacaactgaagttgtcatgtcatgtgcttcat 31574549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 42512855 - 42512765
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  42512855 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 42512765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 6029413 - 6029316
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || ||||||||||||||||||| |||| |||| || ||||||||| ||| ||||||||||||| ||||||||||    
T  6029413 aagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatcaaa 6029316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 472
Target Start/End: Original strand, 16451189 - 16451312
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || |||||||| |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| |||||||||| |    
T  16451189 aagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 16451288  T
Q  449 ttgtacaactgaagttgtcatgtc 472  Q
    ||| ||||||  |||||| |||||    
T  16451289 ttggacaactagagttgttatgtc 16451312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 7837222 - 7837312
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| |||| ||||||||||||| |||| ||| |||||||  ||||||||||||||||| |||||||||| | || ||||||||||||||    
T  7837222 aaaaaattcaatttttgtcatgtcccttgcctctagtttgtcatgttcctgaaacagttttacaaatcaaacactgaacaactgaagttgt 7837312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 377 - 441
Target Start/End: Complemental strand, 8780690 - 8780626
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaa 441  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||| | ||||||||||| ||||    
T  8780690 aaaaatttcagtttttggcatgtctcttgtccccagtttgttatgtccatgaaacagttttacaa 8780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 15539984 - 15539905
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||| ||| |||| |||||| ||||||| ||||||||| |||||||||||| ||| | ||||||||||| ||||||||||    
T  15539984 gtgaaagacaaaagtttcaggttttgtcctgtctcttgcctccagtttgttctgtccttgaaacagttttacaaatcaaa 15539905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 42510605 - 42510684
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| |||||| | |||||||||| |||| ||||||||||||||||  ||| ||||||||||||| || |||||||    
T  42510605 gtgagagacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacgaatcaaa 42510684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 17888037 - 17888107
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  17888037 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 17888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 28340388 - 28340318
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  28340388 aaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 28340318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 447
Target Start/End: Original strand, 35335777 - 35335859
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||| |||||| |||  ||  |||||||| ||||||||||    
T  35335777 ttagtgagagacaagaatatcggtttttgtcatgtctcttgtctccattttgttatgtctctacaacagttttacaaatcaaa 35335859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 50304740 - 50304810
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||| ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  50304740 aaaaatatcagtttttgtcttgtttcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 50304810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 466
Target Start/End: Original strand, 31004194 - 31004311
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||  |||||||||||| |||| | || |||||||||||  ||| ||||||||||||| |||||||||| |    
T  31004194 aagttgtgttgtggtttggtgagggacaaaaacatcagtttttgtcctgtcccgtgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 31004293  T
Q  449 ttgtacaactgaagttgt 466  Q
     || ||||||||||||||    
T  31004294 ctggacaactgaagttgt 31004311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 45490987 - 45490890
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | ||||||||||||||| |||| |||||||||||  ||| | ||||||||||| ||||||||||    
T  45490987 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacttgaaacagttttacaaatcaaa 45490890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 51264557 - 51264654
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  51264557 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 51264654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 16704825 - 16704905
Alignment:
Q  387 gtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||||||| |||| |||| |||||||||||  ||| ||||||||||||| |||||||||| |||| |||| |||||||||    
T  16704825 gtttttgtcgtgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacattggacaattgaagttgt 16704905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 476
Target Start/End: Complemental strand, 26118327 - 26118200
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| | ||||| || ||||| || |||||| | |||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| |||||||||| |    
T  26118327 aagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 26118228  T
Q  449 ttgtacaactgaagttgtcatgtcatgt 476  Q
     || ||||||  |||||| |||||||||    
T  26118227 ctggacaactagagttgttatgtcatgt 26118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 41972991 - 41973070
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| |||||||||||  |||  |||||||||||| ||||||||||    
T  41972991 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtatctgaaacagttttacaaatcaaa 41973070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 45658883 - 45658978
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatca 445  Q
    |||||| ||||||  || ||||| || |||||| |||||||||||| ||||  |||||||||||||||  ||| | ||||||||||| ||||||||    
T  45658883 aagttgtgttgtggtttggtgagcgacaaaaatatcagtttttgtcttgtcctttgtctccagtttgtcctgtacttgaaacagttttacaaatca 45658978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 6144071 - 6143981
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||||| ||||||||||| |||| |||| |||||||||||  |||  ||||||| |||| |||||||||| |||| ||||||| ||||||    
T  6144071 aaaaattgcagtttttgtcctgtcccttgcctccagtttgtcatgtctctgaaactgttttacaaatcaaacattggacaactgcagttgt 6143981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 8838986 - 8839056
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||||||||  ||  ||||||||||| |||| || |||||||||| ||||||||||    
T  8838986 aaaaatatcagtttttgtcatgtccatttcctccagtttgtcttgtaccagaaacagttttacaaatcaaa 8839056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 41967934 - 41967864
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| ||||||||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  41967934 aaaaatatgagtttttgtcttgtctcttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 41967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 49303439 - 49303369
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||||| || |||| |||||||||||||||| || | ||||||||||||| ||||||||||    
T  49303439 aaaaatatgagtttttctcttgtcccttgtctccagtttgtcttatacctgaaacagttttacaaatcaaa 49303369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 1351547 - 1351450
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||  |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  1351547 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 1351450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 5109826 - 5109887
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| |||| |||| ||||| ||||| |||| ||||||||||||| ||||||||||    
T  5109826 agtttttgtcctgtcccttgcctccaatttgtcttgtacctgaaacagttttacaaatcaaa 5109887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 472
Target Start/End: Complemental strand, 11772726 - 11772621
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| |||||||||||| ||||  ||| |||||| |||  |||| ||||||||||||| |||||||||| | || ||||||| ||||||    
T  11772726 gtgagggacaaaaatatcagtttttgtcttgtcctttgcctccagattgccttgtacctgaaacagttttacaaatcaaacactggacaactggagttgt 11772627  T
Q  467 catgtc 472  Q
     |||||    
T  11772626 tatgtc 11772621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 13994187 - 13994070
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||||||||||||||||  ||  |||| ||||| |||||  ||| | ||||||||||| |||||||||| |    
T  13994187 aagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatgaaacagttttacaaatcaaaca 13994088  T
Q  449 ttgtacaactgaagttgt 466  Q
     || ||||||||||||||    
T  13994087 ctggacaactgaagttgt 13994070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 443
Target Start/End: Complemental strand, 17327761 - 17327668
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||| | ||||| || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||    
T  17327761 aagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgactccagtttgtcctgtacctgaaacagttttacaaat 17327668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 472
Target Start/End: Original strand, 26733647 - 26733740
Alignment:
Q  380 aatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtc 472  Q
    |||||||||||||||||||||  | ||||| |||||||   || |   ||||||||| |||||||||| || ||||||||||||||||||||||    
T  26733647 aatttcagtttttgtcatgtccatcgtctctagtttgtccggtcctaaaaacagttttacaaatcaaacatcgtacaactgaagttgtcatgtc 26733740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 464
Target Start/End: Complemental strand, 504488 - 504388
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagt 463  Q
    ||||||||||| |||| |||||||||||||  |||| |||| ||| ||||||| |||| ||| ||||| |||  |||||||||   ||||||||||||||    
T  504488 ttagtgagagacaaaattttcagtttttgtgttgtcccttgcctcaagtttgtcttgtccctaaaacaattttgcaaatcaaacgctgtacaactgaagt 504389  T
Q  464 t 464  Q
    |    
T  504388 t 504388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 464
Target Start/End: Original strand, 7837463 - 7837551
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagtt 464  Q
    ||||| |||| ||||||||||||| | || ||| |||||||  ||||||||||||||||| | |||||||| | || ||||||||||||    
T  7837463 aaaaaattcaatttttgtcatgtcccctgcctctagtttgtcatgttcctgaaacagttttataaatcaaacactgaacaactgaagtt 7837551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 844818 - 844739
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  844818 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 844739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 6711140 - 6711061
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  6711140 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 6711061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 16386934 - 16387013
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  16386934 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 16387013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 24339732 - 24339653
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||  ||||||||||    
T  24339732 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttatacaaatcaaa 24339653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 30105774 - 30105695
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  | | ||||||||||||| ||||||||||    
T  30105774 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctttacctgaaacagttttacaaatcaaa 30105695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 32270433 - 32270512
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  | | ||||||||||||| ||||||||||    
T  32270433 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctctacctgaaacagttttacaaatcaaa 32270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 32289438 - 32289359
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||||| |||||  ||| ||||||||||||| ||||||||||    
T  32289438 gtgagggacaaaaatatgagtttttgtcttgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 32289359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 35387405 - 35387326
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||  |||||||||||  ||| ||||||||||||| ||||||||||    
T  35387405 gtgagggacaaaaatatgagtttttgtcctgtcccttacctccagtttgtcctgtacctgaaacagttttacaaatcaaa 35387326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 7184007 - 7184077
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||| ||||||    
T  7184007 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacatatcaaa 7184077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 441
Target Start/End: Original strand, 15324229 - 15324306
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgt-ctccagtttgttttgttcctgaaacagtttcacaa 441  Q
    ||||||| ||||||  ||||||||||||||||||||| |||| |||| |||||| ||||| ||  |||||||| ||||    
T  15324229 ttagtgaaagataagtatttcagtttttgtcatgtcttttgtcctccggtttgtgttgtttctataacagttttacaa 15324306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 476
Target Start/End: Original strand, 39281974 - 39282083
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| | |||||||||| |||| ||||  || |||||||  ||| ||| ||||||||| |||||||||| | || |||||||||||| |    
T  39281974 gtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtaccttaaacagttttacaaatcaaacactgaacaactgaagttat 39282073  T
Q  467 catgtcatgt 476  Q
    | ||||||||    
T  39282074 cttgtcatgt 39282083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 447
Target Start/End: Complemental strand, 42705297 - 42705252
Alignment:
Q  402 cttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  42705297 cttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaa 42705252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 377 - 476
Target Start/End: Complemental strand, 29611080 - 29610980
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcatg 475  Q
    ||||||||||||||||||| |||| |||| |||||||||||| ||| ||||||||||||| |||||||||| |||| ||||||||||||||  |||||||    
T  29611080 aaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaacattggacaactgaagttgttctgtcatg 29610981  T
Q  476 t 476  Q
    |    
T  29610980 t 29610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 390 - 476
Target Start/End: Original strand, 9624310 - 9624396
Alignment:
Q  390 tttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaaattgtacaactgaagttgtcatgtcatgt 476  Q
    ||||||||||||||||||||| |||||| |||| || |||||| ||| |||||| || | |||||||||||||||||||||||||||    
T  9624310 tttgtcatgtctcttgtctcccgtttgtcttgtcccagaaacaattttacaaataaacagtgtacaactgaagttgtcatgtcatgt 9624396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 7591472 - 7591382
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  7591472 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 7591382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 466
Target Start/End: Original strand, 15001519 - 15001636
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || ||||||||||||||||||  ||||| ||| |||||||||||  ||| ||||||||||||| |||||||||| |    
T  15001519 aagttgtgttgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccagtttgtcctgtccctgaaacagttttacaaatcaaaca 15001618  T
Q  449 ttgtacaactgaagttgt 466  Q
     || ||||||||||||||    
T  15001619 ctggacaactgaagttgt 15001636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 476
Target Start/End: Original strand, 40389111 - 40389220
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||||||||||||| |||||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||| ||||||    
T  40389111 gtgagagataaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgt 40389210  T
Q  467 catgtcatgt 476  Q
      ||||||||    
T  40389211 tctgtcatgt 40389220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 22999338 - 22999408
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  22999338 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 22999408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 41548698 - 41548788
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| |||||||||||| ||||||||| |||||||||||  |||  |||||||||||| |||||||||| | || ||||||||||||||    
T  41548698 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcatgtatctgaaacagttttacaaatcaaacactggacaactgaagttgt 41548788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 27104030 - 27104109
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  27104030 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 27104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 476
Target Start/End: Complemental strand, 30543074 - 30542947
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| |||||||||| |    
T  30543074 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcatgtacctgaaacagttttacaaatcaaaca 30542975  T
Q  449 ttgtacaactgaagttgtcatgtcatgt 476  Q
     || |||||| ||||||| |||||||||    
T  30542974 ctggacaactaaagttgttatgtcatgt 30542947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 476
Target Start/End: Original strand, 39642936 - 39643063
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||| ||||||||| || |||| |||| |||||||||||  ||| ||||||||||||| | |||||||| |    
T  39642936 aagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttaaaaatcaaaca 39643035  T
Q  449 ttgtacaactgaagttgtcatgtcatgt 476  Q
     || ||||||||||||||  ||||||||    
T  39643036 ctggacaactgaagttgttctgtcatgt 39643063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 10467144 - 10467214
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||| ||||||||| ||||||||||    
T  10467144 aaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaa 10467214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 37474780 - 37474850
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| ||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  37474780 aaaaatataagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 37474850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 8673107 - 8673010
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  8673107 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 8673010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 447
Target Start/End: Original strand, 30501235 - 30501295
Alignment:
Q  387 gtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||| |||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  30501235 gtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 30501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 37861930 - 37862009
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| ||||||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| || |||||||    
T  37861930 gtgagggataaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttactaatcaaa 37862009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 29563278 - 29563181
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  29563278 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcgagtttgtcctgtacctgaaacagttttacaaatcaaa 29563181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 37618444 - 37618347
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| |||||||||||| ||||  ||| ||||| |||||  ||| ||||||||||||| ||||||||||    
T  37618444 aagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 37618347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 476
Target Start/End: Complemental strand, 18355006 - 18354907
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcatg 475  Q
    ||||||||||||||| ||  | ||||||| |||| ||||||||||| | || |||||||| |||||| ||| ||| ||||||| || |||||||||||||    
T  18355006 aaaaatttcagtttt-gttgtctctcttggctccggtttgttttgtccatgtaacagttttacaaattaaatattatacaactaaaattgtcatgtcatg 18354908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 39061477 - 39061417
Alignment:
Q  411 agtttgttttgttcctgaaacagtttcacaaatcaaaattgtacaactgaagttgtcatgt 471  Q
    |||||||| ||| ||||||||| ||| |||| | ||||| |||||||||||||||||||||    
T  39061477 agtttgttatgtccctgaaacaattttacaattaaaaatagtacaactgaagttgtcatgt 39061417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 4052551 - 4052630
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||||| |||||  ||| ||||||||||||| ||||||||||    
T  4052551 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 4052630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 34101579 - 34101658
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||  |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  34101579 gtgagggacaaaaatatgagtttttgtgttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 34101658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 37664317 - 37664238
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  37664317 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 37664238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 41709848 - 41709927
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  41709848 gtgagggacaaaaatatgagtttttgtcctgtcatttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 41709927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 14005069 - 14004999
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||| ||||||||| ||||||||||    
T  14005069 aaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctcaaacagttttacaaatcaaa 14004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 466
Target Start/End: Complemental strand, 22756444 - 22756346
Alignment:
Q  369 tgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||| |||||||||||  ||||||||| ||||||||| ||| | |||||  | | || |||||||||| |||||||||| |||||| ||||| ||||||    
T  22756444 tgagggataaaaatttatgtttttgtcttgtctcttgcctcaaatttgtcctatcccagaaacagttttacaaatcaaacattgtataactggagttgt 22756346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 25478323 - 25478389
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||| | ||||||| || |||| ||||||||||||||||  ||| ||||||||||||| ||||||    
T  25478323 aaaaatatgagtttttttcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaat 25478389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 34063208 - 34063278
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||| ||||| ||||||||||    
T  34063208 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaagagttttacaaatcaaa 34063278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 35225742 - 35225812
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||| ||||||||||| |||| |||| |||||||||||  ||| |||||||| |||| ||||| ||||    
T  35225742 aaaaattgcagtttttgtcctgtcccttgcctccagtttgtcctgtccctgaaactgttttacaaaccaaa 35225812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 45446535 - 45446605
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||||| || |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  45446535 aaaaatatgagtttttatcctgtcccttgcctccagtttgtcgtgtacctgaaacagttttacaaatcaaa 45446605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 29672375 - 29672278
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| || |||||||    
T  29672375 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacgaatcaaa 29672278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 45114170 - 45114231
Alignment:
Q  412 gtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtc 472  Q
    ||||||| ||| ||||||||||||| |||||||||| | || |||| |||||||||||||||    
T  45114170 gtttgttctgtacctgaaacagttttacaaatcaaacactgaacaattgaagttgtcatgtc 45114231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 436
Target Start/End: Complemental strand, 7394848 - 7394780
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagttt 436  Q
    ||||| || |||||| | ||||||||||||||| |||| ||| |||||||  ||| |||||||||||||    
T  7394848 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctctagtttgtcatgtacctgaaacagttt 7394780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 368 - 466
Target Start/End: Complemental strand, 50729554 - 50729455
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||| ||| |||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  50729554 gtgatagacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaacactggacaactgaagttgt 50729455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 469
Target Start/End: Original strand, 9948000 - 9948105
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagt 463  Q
    |||||||| ||||| ||||| |||||||||||||||||||| ||| |||||||  ||||||| ||||||||| |||||||||| ||| ||||| |||| |    
T  9948000 ttagtgagggataagaattttagtttttgtcatgtctcttgcctcaagtttgtcatgttccttaaacagttttacaaatcaaacattatacaattgaaat 9948099  T
Q  464 tgtcat 469  Q
    ||||||    
T  9948100 tgtcat 9948105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 26083413 - 26083492
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||| ||| ||||||||||    
T  26083413 gtgagggacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaaa 26083492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 50178495 - 50178405
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  50178495 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 50178405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 37865809 - 37865906
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||| || ||||| || |||||| | |||||||||||||||||||| |||||| ||||  ||| ||||||||||||| ||||||||||    
T  37865809 aagttgtgttgtgatttggtgagggacaaaaatatgagtttttgtcatgtctcttgcctccagattgtcatgtacctgaaacagttttacaaatcaaa 37865906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 476
Target Start/End: Original strand, 39078735 - 39078844
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || ||||||||||| ||||||| | ||||||| |||||||||||| ||| ||||||||||||| |||||||||| | || ||||||| ||||||    
T  39078735 gtgagggacaaaaatttcaggttttgtcctatctcttgcctccagtttgttctgtccctgaaacagttttacaaatcaaacactggacaactggagttgt 39078834  T
Q  467 catgtcatgt 476  Q
      ||||||||    
T  39078835 tctgtcatgt 39078844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 36497291 - 36497370
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||||||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  36497291 gtgagggacaaaaatatgagtttttgtcctgtctcttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaa 36497370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 377 - 448
Target Start/End: Complemental strand, 44649167 - 44649096
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaaa 448  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||||||||    
T  44649167 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaa 44649096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 11056125 - 11056215
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| |||||||||||| |||| |||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  11056125 aaaaatatcagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 11056215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 20518043 - 20517955
Alignment:
Q  359 tgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || ||||| || |||||| | | |||||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  20518043 tgtgatttggtgagggacaaaaatatgactttttgtcctgtctcttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 20517955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 3649710 - 3649789
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||||| |||||||||| |||| |||| || ||||||||| ||| ||||||||||||| ||||||||||    
T  3649710 gtgagggacaaaaattttagtttttgtcctgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatcaaa 3649789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 20802543 - 20802464
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| ||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  20802543 gtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 20802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 36886006 - 36886085
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  36886006 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 36886085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 52949803 - 52949869
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| ||||||    
T  52949803 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaat 52949869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 33177062 - 33176965
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  33177062 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 33176965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 38812576 - 38812673
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  38812576 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 38812673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 4325865 - 4325944
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| |||||| | ||||||| || |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  4325865 gtgagagacaaaaatatgagtttttctcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 4325944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 29785549 - 29785470
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||  |||| ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  29785549 gtgagggacaaaaatatgagtttttgttctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaa 29785470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 38486269 - 38486190
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| ||||||||| |  ||| ||||||||||||| ||||||||||    
T  38486269 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttatcctgtacctgaaacagttttacaaatcaaa 38486190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 29592978 - 29593048
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||||||||||||| ||||  ||||||||||  ||| ||||||||||||| ||||||||||    
T  29592978 aaaaatatgagtttttgtcatgtcccttgcatccagtttgtcctgtacctgaaacagttttacaaatcaaa 29593048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 46680513 - 46680443
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  46680513 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 46680443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 47642494 - 47642424
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||||| || ||||||||  |||||||||||  ||| ||||||||||||| ||||||||||    
T  47642494 aaaaatatcagtttttatcttgtctcttacctccagtttgtcctgtgcctgaaacagttttacaaatcaaa 47642424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 55065363 - 55065265
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtc-tccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| | |||||||||| |||| ||||||||||||| ||||||||||    
T  55065363 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccctccagtttgtcttgtacctgaaacagttttacaaatcaaa 55065265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 7554951 - 7554890
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||| ||||||||||||  | ||||||||||||| | ||||||||||| ||||||||||    
T  7554951 agtttttatcatgtctcttgcattcagtttgttttgtacatgaaacagttttacaaatcaaa 7554890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 21202831 - 21202892
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| ||||||||| |||||||||||  ||| ||| ||||||||| ||||||||||    
T  21202831 agtttttgtcctgtctcttgcctccagtttgtcctgtaccttaaacagttttacaaatcaaa 21202892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 24210411 - 24210472
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  24210411 agtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 24210472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 476
Target Start/End: Complemental strand, 44324354 - 44324245
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| ||||||||||||  |||| ||| ||| |||||||  ||| ||||||||||||| |||||||||| | || ||||||| ||||||    
T  44324354 gtgagggacaaaaatatcagtttttgtcccgtcttttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactggagttgt 44324255  T
Q  467 catgtcatgt 476  Q
      ||||||||    
T  44324254 tctgtcatgt 44324245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 443
Target Start/End: Complemental strand, 49152130 - 49152037
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| ||||  |||||||||| |||| ||||||||||||| ||||||    
T  49152130 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcgtgtcccttgcatccagtttgtcttgtacctgaaacagttttacaaat 49152037  T

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Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 472
Target Start/End: Original strand, 9807238 - 9807334
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtc 472  Q
    ||||| || |||||||||| ||||  |||  || ||||||| |||| ||||||||||||| |||||||||| | || ||||||||||||||| ||||    
T  9807238 aaaaagttgagtttttgtcctgtccattgcatctagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaactgaagttgtcctgtc 9807334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 30942862 - 30942942
Alignment:
Q  368 gtgagagataaaaatttcagttttt-gtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| | |||||||||||||| |||  |||||||| ||||| |||||| ||| ||||||||||||| | ||||||||    
T  30942862 gtgagagacagaaatttcagttttttgtcccgtctcttgcctccaatttgttctgtccctgaaacagttttataaatcaaa 30942942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 52673882 - 52673934
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgt 417  Q
    |||||||| || ||||||||| |||||||||||||| |||| |||||||||||    
T  52673882 ttagtgagggacaaaaatttctgtttttgtcatgtcccttgactccagtttgt 52673934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 1231385 - 1231464
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||  |||||||| ||||||||| |  ||| ||||||||||||| ||||||||||    
T  1231385 gtgagggacaaaaatatgagtttttgtccagtctcttgcctccagtttatcctgtacctgaaacagttttacaaatcaaa 1231464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 2629963 - 2629884
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||||||||  ||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  2629963 gtgagggacaaaaatatgagtttttgtcatgtcctttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 2629884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 21580100 - 21580179
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||||| |||||  ||| ||||||||||||| ||||||||||    
T  21580100 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 21580179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 24002413 - 24002492
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| |||||||| |||| ||||||||||    
T  24002413 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaactgttttacaaatcaaa 24002492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 447
Target Start/End: Complemental strand, 36743680 - 36743621
Alignment:
Q  388 tttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||||| |||| |||||||||||  ||| ||||||||||||| |||| |||||    
T  36743680 tttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaattcaaa 36743621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 44640417 - 44640496
Alignment:
Q  388 tttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||||| ||||||||| ||| |||||||  | ||||  ||||||||| |||||||||| | |||||||||||||||||    
T  44640417 tttttgtcttgtctcttgcctctagtttgtcattttccataaacagttttacaaatcaaacactgtacaactgaagttgt 44640496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 47667048 - 47666961
Alignment:
Q  380 aatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatc-aaaattgtacaactgaagttgt 466  Q
    ||||||| ||||| |||| | ||||| || |||||| || | ||||||||||||||| ||||||| ||| |||||||||| |||||||    
T  47667048 aatttcaatttttatcatatatcttgccttcagtttattctattcctgaaacagttttacaaatcgaaagttgtacaactaaagttgt 47666961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 52319397 - 52319476
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||| ||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  52319397 gtgagggacaaaaatatgagttttcgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 52319476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 53200655 - 53200576
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||||||||||||||||||||  |||| ||||||||| |  |||  ||||||||||||  |||||||||    
T  53200655 gtgagggacaaaaatttcagtttttgtcatgttccttgcctccagtttatcctgtctctgaaacagttttgcaaatcaaa 53200576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 469
Target Start/End: Original strand, 55996845 - 55996944
Alignment:
Q  371 agagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcat 469  Q
    |||||||| |||||| ||||||||| ||||| || | |||||||||||||||   | ||| ||||| |||||||||| |||||| | ||||| |||||||    
T  55996845 agagataagaatttctgtttttgtcgtgtcttttatttccagtttgttttgtctttaaaatagttttacaaatcaaacattgtaaatctgaaattgtcat 55996944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 9512343 - 9512273
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||  |||| ||||||||| | |||| ||||||||||||| ||||||||||    
T  9512343 aaaaatatgagtttttgtcctgttacttgcctccagtttatcttgtacctgaaacagttttacaaatcaaa 9512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 12600969 - 12601039
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| ||| ||||||||||||  ||| |||||||| |||| ||||||||||    
T  12600969 aaaaatatgagtttttgtcttgtcccttatctccagtttgtcctgtacctgaaactgttttacaaatcaaa 12601039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 34929998 - 34930068
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| ||||||||| || |||  |||||||||||| ||||||||||    
T  34929998 aaaaatatgagtttttgtcctgtcccttgcctccagtttattctgtatctgaaacagttttacaaatcaaa 34930068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 50727916 - 50727846
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| || ||||||||  ||| ||||||||||||| ||||||||||    
T  50727916 aaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaa 50727846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 50735930 - 50735860
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| || ||||||||  ||| ||||||||||||| ||||||||||    
T  50735930 aaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaa 50735860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 23521936 - 23522033
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| | || ||||  ||||||||||  ||| ||||||||||||| ||||||||||    
T  23521936 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcttccagtttgtcctgtacctgaaacagttttacaaatcaaa 23522033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 472
Target Start/End: Original strand, 32181337 - 32181442
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| | |||||||||| |||| ||||  || |||||||  ||| | ||||||||||| |||||||||| | || |||||| |||||||    
T  32181337 gtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtacttgaaacagttttacaaatcaaacactggacaactaaagttgt 32181436  T
Q  467 catgtc 472  Q
    ||||||    
T  32181437 catgtc 32181442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 55593977 - 55594038
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| |||| |||| ||||||||| |  ||| ||||||||||||| ||||||||||    
T  55593977 agtttttgtcctgtcccttgcctccagtttatcatgtacctgaaacagttttacaaatcaaa 55594038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 474
Target Start/End: Original strand, 47741386 - 47741450
Alignment:
Q  411 agtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcat 474  Q
    ||||||| ||||| | |||| ||||| |||||| ||| ||||||||| |||||||||||||||||    
T  47741386 agtttgtgttgtttcagaaatagttttacaaattaaacattgtacaattgaagttgtcatgtcat 47741450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 368 - 483
Target Start/End: Original strand, 6896239 - 6896355
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||||||||||||| || |||| |||| |||||||||||||||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  6896239 gtgagggacaaaaatttcagtttttatcctgtcccttgcctccagtttgttttgtccctgaaacagttttacaaatcaaacactggacaactgaagttgt 6896338  T
Q  467 catgtcatgtgtttcat 483  Q
      |||| ||| ||||||    
T  6896339 tctgtcctgtctttcat 6896355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 41366129 - 41366050
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || ||||||||||||||||||| | ||||||| |||||||||||  ||| |||||||| |||||||||||||||    
T  41366129 gtgagggacaaaaatttcagtttttgtcctatctcttgcctccagtttgtcatgtccctgaaactgtttcacaaatcaaa 41366050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 447
Target Start/End: Original strand, 44284697 - 44284779
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| || |||||| | |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  44284697 ttagtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 44284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 8112353 - 8112450
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || |||||||| |||||| | |||||||||  ||||||||| |||||||||||| ||| ||||||||| ||| ||||||||||    
T  8112353 aagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtattgtctcttgcctccagtttgttctgtacctgaaacaattttacaaatcaaa 8112450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 32766541 - 32766444
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| |||||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  32766541 aagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 32766444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 476
Target Start/End: Complemental strand, 38623323 - 38623214
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || ||||||||||||||||||| | ||  ||| ||| |||||||  ||| ||||||||||||| |||||||||| |||| | ||||||||||||    
T  38623323 gtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctgtccctgaaacagttttacaaatcaaacattggataactgaagttgt 38623224  T
Q  467 catgtcatgt 476  Q
     |||||||||    
T  38623223 tatgtcatgt 38623214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 477
Target Start/End: Complemental strand, 40832506 - 40832378
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||| || ||||||||| |||| |||| ||||||||||| |||| ||||||| || || |||||||||| |    
T  40832506 aagttgtgttgtggtttggtgagggacaaaaatatccgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaatagctttacaaatcaaaca 40832407  T
Q  449 ttgtacaactgaagttgtcatgtcatgtg 477  Q
     || |||||| ||||||| ||||||||||    
T  40832406 ctggacaacttaagttgttatgtcatgtg 40832378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 9732967 - 9732870
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  9732967 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 9732870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 37308708 - 37308805
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  37308708 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 37308805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 40692386 - 40692443
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||||||| |||| |||||||||||||||| |||| ||| ||||||||||||||||    
T  40692386 agtttttgtcctgtcccttgtctccagtttgtcttgtacctaaaacagtttcacaaat 40692443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 483
Target Start/End: Original strand, 30712931 - 30713047
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||||||||||| |||| |||| |||| |||||| ||||| ||| ||||||||||| | |||||||||| | || | ||||| ||||||    
T  30712931 gtgagggacaaaaatttcagtttgtgtcctgtcccttgcctccaggttgttctgtccctgaaacagtattacaaatcaaacactggataactggagttgt 30713030  T
Q  467 catgtcatgtgtttcat 483  Q
      |||||||| ||||||    
T  30713031 tttgtcatgtctttcat 30713047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 5278853 - 5278774
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  5278853 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 5278774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 7258968 - 7259047
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  7258968 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 7259047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 18685907 - 18685986
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| |||||| | |||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  18685907 gtgagagacaaaaatatgagtttttgtcttgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 18685986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 33366690 - 33366760
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  33366690 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 33366760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 34338890 - 34338960
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  34338890 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 34338960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 476
Target Start/End: Complemental strand, 28824576 - 28824467
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| | |||||||||| || | |||| ||||||| |||  ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  28824576 gtgagggacaaaaatatgagtttttgtcctgacccttgactccagtatgtgctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 28824477  T
Q  467 catgtcatgt 476  Q
      ||||||||    
T  28824476 tctgtcatgt 28824467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 42706412 - 42706509
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| | || |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  42706412 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttatcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 42706509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 476
Target Start/End: Original strand, 22979914 - 22980014
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtc-tccagtttgttttgttcctgaaacagtttcacaaatcaaaattgtacaactgaagttgtcatgtcatg 475  Q
    ||||| |||| ||||||||| |||||||||| |||| |||||  ||||||| ||||| ||| |||| | || ||||||||||| || ||||| |||||||    
T  22979914 aaaaagttcaatttttgtcaagtctcttgtcctccattttgtcatgttcctaaaacattttgacaactaaacattgtacaacttaaattgtcttgtcatg 22980013  T
Q  476 t 476  Q
    |    
T  22980014 t 22980014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 7761592 - 7761513
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  7761592 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgtacctgaaacagttttacaaatcaaa 7761513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 17540786 - 17540865
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| | ||||||||||| ||||||||||    
T  17540786 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacttgaaacagttttacaaatcaaa 17540865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 35114856 - 35114935
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  35114856 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 35114935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 39461405 - 39461464
Alignment:
Q  388 tttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  39461405 tttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 39461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 32497995 - 32498065
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| || ||||||||  ||| ||||||||||||| ||||||||||    
T  32497995 aaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaa 32498065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 38993081 - 38993011
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||  |||||||||| |||| |||| |||||||||||  | |||||||||| |||| ||||||||||    
T  38993081 aaaaattgtagtttttgtcctgtcccttgcctccagtttgtcctcttcctgaaactgttttacaaatcaaa 38993011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 42365657 - 42365727
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| |||||||| |||| ||||||||||    
T  42365657 aaaaatatgagtttttgtcttgtcccttgcctccagtttgtcatgtacctgaaacggttttacaaatcaaa 42365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 3913461 - 3913400
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| ||| ||||| |||||||||||  | | ||||||||||||| ||||||||||    
T  3913461 agtttttgtcctgtttcttgcctccagtttgtcatatacctgaaacagttttacaaatcaaa 3913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 447
Target Start/End: Complemental strand, 22063811 - 22063731
Alignment:
Q  366 tagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| || |||||||| |||| ||||||| |||| ||||| ||| || ||||| ||||||| ||| ||||||||||    
T  22063811 tagtgagagacaataatttcag-ttttatcatgtcccttgcctccaatttattgtgttcttgaaacaattttacaaatcaaa 22063731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 30326333 - 30326272
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| |||| | || |||||||||||  ||| ||||||||||||| ||||||||||    
T  30326333 agtttttgtcctgtcccctgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 30326272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 2086173 - 2086213
Alignment:
Q  407 ctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  2086173 ctccagtttgtcttgtacctgaaacagttttacaaatcaaa 2086213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 4641624 - 4641664
Alignment:
Q  407 ctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  4641624 ctccagtttgtcttgtacctgaaacagttttacaaatcaaa 4641664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 3867662 - 3867583
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||    
T  3867662 gtgagggacaaaaatttcaggttttgtcatgtctcttgtctccagtatgttctgtccctgaaacagttttacaaatcaaa 3867583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 19906834 - 19906933
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || ||||||||||||||||||| |||| |||| |||||||||||| ||| ||||||||| ||| |||||||||| | || ||||||||||||||    
T  19906834 gtgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaaacactggacaactgaagttgt 19906933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 476
Target Start/End: Complemental strand, 31883026 - 31882926
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcatg 475  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||| ||||||  |||||||    
T  31883026 aaaaatatcagtttttgtcgtgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgttctgtcatg 31882927  T
Q  476 t 476  Q
    |    
T  31882926 t 31882926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 41683050 - 41682967
Alignment:
Q  384 tcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  41683050 tcagtttttgtcttgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 41682967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 33364782 - 33364692
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||| ||| | || ||||||||||||||    
T  33364782 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaataaaacactggacaactgaagttgt 33364692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 50386460 - 50386390
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||| |||||||||||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  50386460 aaaaatatcaatttttgtcatgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 50386390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 472
Target Start/End: Complemental strand, 12349184 - 12349079
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||||| |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| |||||||||| | || ||||||| ||||||    
T  12349184 gtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgt 12349085  T
Q  467 catgtc 472  Q
     |||||    
T  12349084 tatgtc 12349079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 49748942 - 49748845
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| |||||||||||||||||  ||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  49748942 aagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcatgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 49748845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 24571353 - 24571432
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  24571353 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 24571432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 25860434 - 25860355
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  25860434 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 25860355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 40094575 - 40094654
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||| ||| ||||||||||||| ||||||||||    
T  40094575 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgttctgtacctgaaacagttttacaaatcaaa 40094654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 29584929 - 29585026
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  29584929 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 29585026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 39052869 - 39052772
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || |||||||| |||||| | |||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  39052869 aagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcctgtgcctgaaacagttttacaaatcaaa 39052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 34026739 - 34026818
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| |||||||||||  | | ||||||||||||| ||||||||||    
T  34026739 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctatacctgaaacagttttacaaatcaaa 34026818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 51259793 - 51259714
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  51259793 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 51259714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 3864679 - 3864609
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| ||||  ||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  3864679 aaaaatatgagtttttgtcctgtcctttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 3864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 10747281 - 10747351
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||| | |||||||||||||||||||  ||| ||| ||| ||||| ||||||||||    
T  10747281 aaaaatatcagtttttgtcctatctcttgtctccagtttgtcctgtacctaaaatagttttacaaatcaaa 10747351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 446
Target Start/End: Complemental strand, 39215474 - 39215404
Alignment:
Q  376 taaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaa 446  Q
    |||||||||||||||||||| |||| |||  |||| ||||||  ||||| ||||||||||| |||||||||    
T  39215474 taaaaatttcagtttttgtcttgtcccttacctccggtttgtcctgttcttgaaacagttttacaaatcaa 39215404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 465
Target Start/End: Complemental strand, 17264688 - 17264587
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagt 463  Q
    |||||||  ||||| |||||||| ||||||||||| |||||  ||| ||||||| ||||  || |||||||| |||||||||| ||||||||| | ||||    
T  17264688 ttagtgaaggataataatttcagcttttgtcatgtatcttgcttcctgtttgttatgtttttgtaacagttttacaaatcaaatattgtacaattaaagt 17264589  T
Q  464 tg 465  Q
    ||    
T  17264588 tg 17264587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 474
Target Start/End: Original strand, 21373984 - 21374109
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||| | || ||||||| |||| |||| ||| |||||||  ||| ||||||||||||| |||||||||| |    
T  21373984 aagttgtgttgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctcaagtttgtcctgtacctgaaacagttttacaaatcaaaca 21374083  T
Q  449 ttgtacaactgaagttgtcatgtcat 474  Q
     |  |||||||||||||| |||||||    
T  21374084 ctagacaactgaagttgttatgtcat 21374109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 24721567 - 24721636
Alignment:
Q  378 aaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||| |||||||||| ||||  ||  |||||||||||| ||| ||||||||||||| ||||||||||    
T  24721567 aaaattttagtttttgtcctgtcctttacctccagtttgttctgtccctgaaacagttttacaaatcaaa 24721636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 28675844 - 28675941
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| | || |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  28675844 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 28675941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 50678852 - 50678949
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || |||||||| |||||| |||||||||||| |||   ||| |||||||||||  ||| |||||||||||||  |||||||||    
T  50678852 aagttgtgttgtggtttggtgagagacaaaaatatcagtttttgtcctgttctttgcctccagtttgtcctgtacctgaaacagtttttcaaatcaaa 50678949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 443
Target Start/End: Complemental strand, 51925239 - 51925146
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||| ||||||  || ||||| || |||||| |||||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| ||||||    
T  51925239 aagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcatgtacctgaaacagttttacaaat 51925146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 26847411 - 26847515
Alignment:
Q  380 aatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcatgtgt 478  Q
    |||||||||||||||| ||||||||| ||||| |||||| | |  || ||||||||| |||||| ||| | | ||||| || |||||||||||||| ||     
T  26847411 aatttcagtttttgtcctgtctcttgcctccaatttgttatatcacttaaacagttttacaaattaaacactatacaagtggagttgtcatgtcatatgc 26847510  T
Q  479 ttcat 483  Q
    |||||    
T  26847511 ttcat 26847515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 3964360 - 3964459
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||||||||||||||||  ||  |||| ||||| |||||  ||| | ||||||||||| |||||||||| | || ||||||||||||||    
T  3964360 gtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatgaaacagttttacaaatcaaacactggacaactgaagttgt 3964459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 20255116 - 20255195
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||  |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  20255116 gtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 20255195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 20609661 - 20609582
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| | |||||||||  ||| ||||||||||||| ||||||||||    
T  20609661 gtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagtttgtcctgtacctgaaacagttttacaaatcaaa 20609582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 44117020 - 44117090
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| |||||||| |||| ||||||||||    
T  44117020 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacggttttacaaatcaaa 44117090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 3695302 - 3695241
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| |||| |||| |||||||||||  ||| ||| ||||||||| ||||||||||    
T  3695302 agtttttgtcctgtcccttgcctccagtttgtcatgtacctaaaacagttttacaaatcaaa 3695241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 21221391 - 21221295
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||| ||  ||| ||||||||||||| ||||||||||    
T  21221391 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtt-gtcctgtacctgaaacagttttacaaatcaaa 21221295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 446
Target Start/End: Complemental strand, 22484735 - 22484678
Alignment:
Q  389 ttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaa 446  Q
    |||||||||||| |||| |||||||||||  ||| |||||||| |||| |||||||||    
T  22484735 ttttgtcatgtcccttgcctccagtttgtcatgtccctgaaactgttttacaaatcaa 22484678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 45605653 - 45605624
Alignment:
Q  366 tagtgagagataaaaatttcagtttttgtc 395  Q
    ||||||||||||||||||||||||||||||    
T  45605653 tagtgagagataaaaatttcagtttttgtc 45605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 34176883 - 34176980
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||| || |||||||| |||||| | ||||||||||||||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  34176883 aagttgtgctgtgatttggtgagagacaaaaatatgagtttttgtcatgtcacttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 34176980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 3259736 - 3259833
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| ||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  3259736 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 3259833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 11675432 - 11675353
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| |||||| |||||||||||| ||||  ||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  11675432 gtgagagacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 11675353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 32409910 - 32409831
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  32409910 gtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaa 32409831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 11212346 - 11212407
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||||||| ||| ||||||||||||  ||| ||||||||||||| ||||||||||    
T  11212346 agtttttgtcatgtcccttatctccagtttgtcctgtacctgaaacagttttacaaatcaaa 11212407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 18597234 - 18597137
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || ||||||||||| |||||||||||| |||| |||| ||||||  | | ||||||||||||| ||||||||||    
T  18597234 aagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctccggtttgtcatatccctgaaacagttttacaaatcaaa 18597137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 32132456 - 32132359
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||| ||| ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||| ||||||||| ||||||||||    
T  32132456 aagttgtgttgtggattggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaa 32132359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 9614066 - 9614142
Alignment:
Q  389 ttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagtt 464  Q
    |||||||||||| |||| ||||||||| |  ||| | ||||||||||| |||||||||| |||||||||||||||||    
T  9614066 ttttgtcatgtcccttgcctccagtttatcctgtccttgaaacagttttacaaatcaaacattgtacaactgaagtt 9614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 3379781 - 3379860
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| |||||||||||| ||||||||| |||||||||||  |||  |||||||||||| | ||||||||    
T  3379781 gtgagcgacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtatctgaaacagttttataaatcaaa 3379860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 3932865 - 3932786
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| |||||| | |||||||||| || | |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  3932865 gtgagagacaaaaatatgagtttttgtcctgccccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 3932786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 15276995 - 15276916
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  15276995 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 15276916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 24203433 - 24203512
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| ||||||||| |||||||||||  ||| ||| ||||||||| ||||||||||    
T  24203433 gtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaa 24203512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 10485237 - 10485307
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||| | ||| ||||||||||    
T  10485237 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaataattttacaaatcaaa 10485307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 32860131 - 32860201
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||| ||| |||||||||||| |||| |||||||||||  ||| |||||||| |||| ||||||||||    
T  32860131 aaaaattgcagcttttgtcatgtcccttgcctccagtttgtcatgtccctgaaactgttttacaaatcaaa 32860201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 166999 - 166902
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | ||||||||| ||||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  166999 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgttatgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 166902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 472
Target Start/End: Complemental strand, 14925514 - 14925409
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| | |||||||||| |||| |||   || |||||||  ||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  14925514 gtgagggacaaaaatatgagtttttgtcctgtcccttacatctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 14925415  T
Q  467 catgtc 472  Q
    ||||||    
T  14925414 catgtc 14925409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 472
Target Start/End: Complemental strand, 31870176 - 31870050
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgtt---ttgttcctgaaacagtttcacaaatcaa 446  Q
    |||||| ||||||  || ||||| || |||||| |||||||||||  |||| |||| ||| ||||||||   |||||||||| ||||||| |||||||||    
T  31870176 aagttgtgttgtggtttggtgagggacaaaaatatcagtttttgttttgtcccttgcctctagtttgttctgttgttcctgagacagttttacaaatcaa 31870077  T
Q  447 a-attgtacaactgaagttgtcatgtc 472  Q
    | | || ||||||| |||||| |||||    
T  31870076 acactggacaactggagttgttatgtc 31870050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 447
Target Start/End: Complemental strand, 8177920 - 8177861
Alignment:
Q  388 tttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||| |||| |||||||||||||||| ||||||||||||| | ||||||||    
T  8177920 tttttatcctgtcccttgcctccagtttgttttgtacctgaaacagttttataaatcaaa 8177861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 443
Target Start/End: Original strand, 11382137 - 11382208
Alignment:
Q  372 gagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||| |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||    
T  11382137 gagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaat 11382208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 11613849 - 11613770
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||  |||||||||| |||||  ||| ||||||||||||| ||||||||||    
T  11613849 gtgagggacaaaaatatgagtttttgtcctgttccttgtctccattttgtcctgtacctgaaacagttttacaaatcaaa 11613770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 24242735 - 24242814
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||  |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  24242735 gtgagggacaaaaatatgagtttttgttgtgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 24242814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 10960080 - 10960150
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| || ||||||||  ||| ||||||||||||| ||||||||||    
T  10960080 aaaaatatgagtttttgtcctgtcccttgccttcagtttgtcctgtacctgaaacagttttacaaatcaaa 10960150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 17867915 - 17867985
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||||| || |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  17867915 aaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 17867985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 17877698 - 17877768
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||||| || |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  17877698 aaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 17877768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 29054436 - 29054506
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||  ||||||||||||||| ||||  |||| |||||  |||||||||||| |||| ||||||||||    
T  29054436 aaaaattgtagtttttgtcatgtcccttgcttccaatttgtcctgttcctgaaactgttttacaaatcaaa 29054506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 443
Target Start/End: Complemental strand, 10324187 - 10324094
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||    
T  10324187 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaat 10324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 11279181 - 11279278
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| | || |||||||||||  ||| | ||||||||||| ||||||||||    
T  11279181 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccatgcctccagtttgtcctgtacttgaaacagttttacaaatcaaa 11279278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 329545 - 329624
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || ||||||||||||||||||| ||||  ||| |||||||||||| ||| ||||||||||||| ||||||||||    
T  329545 gtgagggacaaaaatttcagtttttgtcttgtcctttgcctccagtttgttctgtccctgaaacagttttacaaatcaaa 329624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 38301426 - 38301496
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||| ||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  38301426 aaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 38301496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 48445605 - 48445671
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||| ||| ||||||||| ||||||    
T  48445605 aaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctcaaacagttttacaaat 48445671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 21784928 - 21785025
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| ||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  21784928 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcatgtgcctgaaacagttttacaaatcaaa 21785025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 47953265 - 47953344
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  47953265 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 47953344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 1870192 - 1870289
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| ||||||||| | |||| ||||||||||||| ||||||||||    
T  1870192 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttatcttgtacctgaaacagttttacaaatcaaa 1870289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 40753212 - 40753309
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||| || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  40753212 aagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 40753309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 10932577 - 10932498
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  10932577 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 10932498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 476
Target Start/End: Complemental strand, 21408625 - 21408538
Alignment:
Q  390 tttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcatgt 476  Q
    ||||||||||| |||| ||||||||||| |||| ||  |||||| || |||||||||| |||||||||||  || |||||||||||||    
T  21408625 tttgtcatgtcccttgcctccagtttgtgttgtcccaaaaacagctttacaaatcaaatattgtacaactagagatgtcatgtcatgt 21408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 41211220 - 41211141
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| ||||||| |||| ||||||||||||| ||||||||||    
T  41211220 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcttgtacctgaaacagttttacaaatcaaa 41211141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 1363720 - 1363810
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| |||| |||||||||||| |||| |||||||||||  ||| | ||||||| ||| |||||||||| | || ||||||||||||||    
T  1363720 aaaaatatcagcttttgtcatgtcccttgcctccagtttgtcctgtacatgaaacaattttacaaatcaaacactggacaactgaagttgt 1363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 43158697 - 43158627
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  43158697 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 43158627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 43368285 - 43368355
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||||||||  |||||||| |||||||||||  | | ||||||||||||| ||||||||||    
T  43368285 aaaaatatcagtttttgtcccgtctcttgcctccagtttgtcctatacctgaaacagttttacaaatcaaa 43368355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 22724569 - 22724472
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| ||||  || ||||| || ||||||| ||| ||||||||| || |||| |||||||||||  ||| |||||||| |||| ||||||||||    
T  22724569 aagttgcgctgtggtttggtgagggacaaaaattgcagcttttgtcatatcccttgcctccagtttgtcctgtccctgaaactgttttacaaatcaaa 22724472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 47316736 - 47316639
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||| ||| ||||||||||    
T  47316736 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaatcaaa 47316639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 18470759 - 18470836
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||| |||||| | |||||||||| |||||  || |||||||||||  ||| ||||||||||||| ||||||||||    
T  18470759 gtgagagacaaaaatatgagtttttgtcctgtct--tgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 18470836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 26994245 - 26994166
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | || ||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  26994245 gtgagggacaaaaatatgagattttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 26994166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 36769589 - 36769510
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  36769589 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 36769510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 44748770 - 44748849
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||||| |||||||||  |||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  44748770 gtgagggacaaaaatttgagtttttgttctgtcccttgcctctagtttgtcatgtacctgaaacagttttacaaatcaaa 44748849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 3922714 - 3922648
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaat 443  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||    
T  3922714 aaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaat 3922648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 18386620 - 18386678
Alignment:
Q  389 ttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  18386620 ttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 18386678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 46627267 - 46627313
Alignment:
Q  402 cttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaaa 448  Q
    |||||||||||||| |||||| ||||||||||||| |||||| ||||    
T  46627267 cttgtctccagtttattttgtacctgaaacagttttacaaataaaaa 46627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 476
Target Start/End: Complemental strand, 11321905 - 11321796
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| | |||||||||| ||||  ||| |||||||||||  ||| |||||| |||||| |||||||||| |||| ||||||  ||||||    
T  11321905 gtgagggacaaaaatatgagtttttgtcctgtccgttgcctccagtttgtcctgtacctgaatcagttttacaaatcaaacattggacaactagagttgt 11321806  T
Q  467 catgtcatgt 476  Q
      ||||||||    
T  11321805 tctgtcatgt 11321796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 11822280 - 11822377
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  |||||||  || |||||| | ||||||||||||||| ||||  ||||||||||  ||| ||| ||||||||| || |||||||    
T  11822280 aagttgtgttgtggtttagtgaaggacaaaaatatgagtttttgtcatgtcccttgcatccagtttgtcctgtacctcaaacagttttacgaatcaaa 11822377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 26371847 - 26371750
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||| || ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||| |||||  |||||||||    
T  26371847 aagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaatagttttgcaaatcaaa 26371750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 476
Target Start/End: Original strand, 26700572 - 26700661
Alignment:
Q  388 tttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcatgt 476  Q
    |||||||| | ||||||| |||||||||||  ||| ||||||||||||  |||||||||| | || ||||||| | |||| |||||||||    
T  26700572 tttttgtcctttctcttgcctccagtttgtcatgtacctgaaacagttatacaaatcaaacactggacaactggaattgttatgtcatgt 26700661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 43189280 - 43189183
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | ||||||||||||||| |||  |||||||||||  ||| ||||||||| ||| | ||||||||    
T  43189280 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttacctccagtttgtcctgtacctgaaacatttttataaatcaaa 43189183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 476
Target Start/End: Complemental strand, 4689741 - 4689614
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||| |  ||||||||| |||| |||| ||||||||||| |||| ||||||||||||| |||||||||| |    
T  4689741 aagttgtgttgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaaca 4689642  T
Q  449 ttgtacaactgaagttgtcatgtcatgt 476  Q
     || ||||||||||||||  ||||||||    
T  4689641 ctggacaactgaagttgttctgtcatgt 4689614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 476
Target Start/End: Complemental strand, 31770634 - 31770507
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| ||||||||| | |||||||||| |||| |||| ||||||||||| |||| | ||||||||||| |||||||||| |    
T  31770634 aagttgtgttgtggtttggtgagggataaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacatgaaacagttttacaaatcaaaca 31770535  T
Q  449 ttgtacaactgaagttgtcatgtcatgt 476  Q
     || ||||||  |||||| |||||||||    
T  31770534 ctgaacaactagagttgttatgtcatgt 31770507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 476
Target Start/End: Original strand, 32528768 - 32528895
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-a 448  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| ||||||||||||||||  ||| ||||||||||||| |||||||||| |    
T  32528768 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 32528867  T
Q  449 ttgtacaactgaagttgtcatgtcatgt 476  Q
     || ||||||  ||||||| ||||||||    
T  32528868 ctgaacaactagagttgtcctgtcatgt 32528895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 18470444 - 18470374
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||||||||||| |||| |||| || ||||||||| ||| ||||||||||||| ||||||||||    
T  18470444 aaaaatttcagtttttgtcttgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatcaaa 18470374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 37148605 - 37148535
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||||||||||||  ||| |||| |||||||||||| ||| ||||||||||||| ||||||||||    
T  37148605 aaaaatttcagtttttgtcccgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaa 37148535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 11963412 - 11963491
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  11963412 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 11963491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 28090545 - 28090466
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | ||||||||||||||| |||| ||||||||||  |||| ||||||||||||| ||||||||||    
T  28090545 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgccttgtacctgaaacagttttacaaatcaaa 28090466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 553450 - 553547
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || |||||||| |||||| | |||||||||| ||||||||| |||||||||||  ||| | ||||||||||| | ||||||||    
T  553450 aagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcttgtctcttgcctccagtttgtcctgtacttgaaacagttttataaatcaaa 553547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 4818165 - 4818086
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||  |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  4818165 gtgagggacaaaaatatgagtttttgtcttgttccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 4818086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 7523243 - 7523322
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  7523243 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 7523322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 21739186 - 21739107
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  21739186 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 21739107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 24181649 - 24181570
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  24181649 gtgagggacaaaaatatgagtttttgtcctgtcccttggctccagtttgtcctgtacctgaaacagttttacaaatcaaa 24181570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 39918578 - 39918657
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||||||||||| ||||  |||||||||||| ||||||||||    
T  39918578 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtatctgaaacagttttacaaatcaaa 39918657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 22432325 - 22432255
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| |||||||||||| ||||||||| ||||||||| |  ||  ||||||||||||| ||||||||||    
T  22432325 aaaaatatcagtttttgtcctgtctcttgcctccagtttatcctgaacctgaaacagttttacaaatcaaa 22432255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 8136890 - 8136987
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| ||||||||| |||||||||||  |||  |||||||||||| ||||| ||||    
T  8136890 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtatctgaaacagttttacaaaacaaa 8136987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 476
Target Start/End: Original strand, 34794958 - 34795067
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    ||||| || |||||| | |||||||||| |||| |||| ||| |||||||  ||| ||||||||||||| |||||||||| |||| ||||||  ||||||    
T  34794958 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaatattggacaactagagttgt 34795057  T
Q  467 catgtcatgt 476  Q
      ||||||||    
T  34795058 tctgtcatgt 34795067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 40489390 - 40489487
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||| || ||||| || |||||| | ||||||||||  ||| |||| ||||||||||| || | ||||||||||||| ||||||||||    
T  40489390 aagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcccgtcccttgcctccagtttgtcttctacctgaaacagttttacaaatcaaa 40489487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 31880101 - 31880022
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| || |||||||    
T  31880101 gtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttactaatcaaa 31880022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 35701348 - 35701427
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| |||||||||||  ||| || |||||||||| ||||||||||    
T  35701348 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccagaaacagttttacaaatcaaa 35701427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 5598560 - 5598630
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| || ||||||||| | || |||| ||||||||||| | || ||||||||||||| ||||||||||    
T  5598560 aaaaatatctgtttttgtcctctcccttgcctccagtttgtctcgtacctgaaacagttttacaaatcaaa 5598630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 7725825 - 7725735
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||| | ||||||||||||||| ||||  ||||||||||| ||  ||||||||| ||| || ||||||| | || ||||||||||||||    
T  7725825 aaaaatatgagtttttgtcatgtcccttgcatccagtttgttctgcacctgaaacaattttactaatcaaacactggacaactgaagttgt 7725735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 23091320 - 23091250
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| ||||||||| |  ||| ||||||||||||| ||||||||||    
T  23091320 aaaaatatgagtttttgtcttgtcccttgcctccagtttatcctgtacctgaaacagttttacaaatcaaa 23091250  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 26180299 - 26180217
Alignment:
Q  388 tttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcat 469  Q
    |||||||||| ||| ||||||||| ||| |  ||| ||  ||||||||| |||||||||| |||||| |||||||||||||||    
T  26180299 tttttgtcatatcttttgtctccaatttatcatgtcccaaaaacagttttacaaatcaaatattgtataactgaagttgtcat 26180217  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 32092998 - 32092928
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||||||||||| | ||  ||| ||||| |||||  ||||||||||||| ||| ||||||||||    
T  32092998 aaaaatttcagtttttgtcctatcctttgcctccaatttgtcctgttcctgaaacaattttacaaatcaaa 32092928  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 476
Target Start/End: Original strand, 3735437 - 3735537
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgtcatgtcatg 475  Q
    |||||| |||||||||||| ||||  ||| ||||| |||||  ||| |||||||| |||| |||||||||| | || ||||||| ||||||  |||||||    
T  3735437 aaaaatatcagtttttgtcctgtccattgcctccattttgtcatgtacctgaaacggttttacaaatcaaacactggacaactggagttgttctgtcatg 3735536  T
Q  476 t 476  Q
    |    
T  3735537 t 3735537  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 447
Target Start/End: Complemental strand, 7770285 - 7770225
Alignment:
Q  387 gtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||| |||| |||| |||||||||||  ||| ||||||||| ||| ||||||||||    
T  7770285 gtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaatcaaa 7770225  T

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Target: scaffold0050 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 42993 - 42896
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || | ||||||||||||||||  |||| |||| |||||||||||| ||| ||||||||||||| ||||||||||    
T  42993 aagttgtgttgtggtttggtgagggacacaaatttcagtttttgttctgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaa 42896  T

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Target: scaffold0280 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 13712 - 13633
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || ||||||||||||||||||| | || |||| |||||||||||| ||| ||||||||| ||| ||||||||||    
T  13712 gtgagggacaaaaatttcagtttttgtcctatcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaaa 13633  T

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Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 5444 - 5365
Alignment:
Q  388 tttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagttgt 466  Q
    |||||||| |||| |||| ||||||||||| |||| ||||||||||||| |||||||||| | || ||||||||||||||    
T  5444 tttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 5365  T

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Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 372989 - 372910
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||||| || |||||||||||||| || ||| ||||||||||||| ||||||||||    
T  372989 gtgagggacaaaaatatgagtttttgtcatatcccttgtctccagttttttctgtacctgaaacagttttacaaatcaaa 372910  T

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Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 1686 - 1589
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || ||||||||||||||||||| |||| |||| |||||||||||  | | | ||||||||||| ||||||||||    
T  1686 aagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcttgtcccttgcctccagtttgtcctatccttgaaacagttttacaaatcaaa 1589  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 23655 - 23725
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | ||||||||||||||| |||| ||| |||||||  ||| ||||||||||||| ||||||||||    
T  23655 aaaaatatgagtttttgtcatgtcccttgcctcaagtttgtcctgtacctgaaacagttttacaaatcaaa 23725  T

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Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 472
Target Start/End: Original strand, 19975 - 20083
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa-attgtacaactgaagt 463  Q
    |||||||| || || |||||||||||||||||| || ||| ||| || ||||| || |  || ||||||||| ||| |||||| | |||| ||||||| |    
T  19975 ttagtgagtgacaagaatttcagtttttgtcatatcccttttctacaatttgtcttatctctaaaacagttttacatatcaaacactgtataactgaaat 20074  T
Q  464 tgtcatgtc 472  Q
    |||||||||    
T  20075 tgtcatgtc 20083  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 19172 - 19102
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||||||||||||||||| ||||  ||| |||| |||| || ||| ||||||||||||| ||||||||||    
T  19172 aaaaatttcagtttttgtcctgtccattgcctcctgtttattctgtccctgaaacagttttacaaatcaaa 19102  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 15252 - 15322
Alignment:
Q  377 aaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| | |||||||||| |||| |||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  15252 aaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 15322  T

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Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 18097 - 18000
Alignment:
Q  350 aagttgcgttgtgaattagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||| ||||||  || ||||| || |||||| | |||||||||| |||| |||| ||||| |||||  ||| ||||||||||||| ||||||||||    
T  18097 aagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcatgtacctgaaacagttttacaaatcaaa 18000  T

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Target: scaffold0208 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 2363 - 2284
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| |||| ||||| |||||  ||| ||||||||||||| ||||||||||    
T  2363 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 2284  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 51509 - 51588
Alignment:
Q  368 gtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    ||||| || |||||| | |||||||||| |||| ||||  ||||||||||| ||  ||||||||||||| ||||||||||    
T  51509 gtgagggacaaaaatatgagtttttgtcttgtcccttgcatccagtttgttctgcacctgaaacagttttacaaatcaaa 51588  T

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Target: scaffold0957 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 2503 - 2442
Alignment:
Q  386 agtttttgtcatgtctcttgtctccagtttgttttgttcctgaaacagtttcacaaatcaaa 447  Q
    |||||||||| |||| |||  ||||| ||||| |||| ||||||||||||| ||||||||||    
T  2503 agtttttgtcctgtccctttcctccaatttgtcttgtacctgaaacagttttacaaatcaaa 2442  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 13607 - 13555
Alignment:
Q  365 ttagtgagagataaaaatttcagtttttgtcatgtctcttgtctccagtttgt 417  Q
    ||||||||||| | |||||||| |||||||||||||| ||| ||||| |||||    
T  13607 ttagtgagagacacaaatttcaatttttgtcatgtctattgcctccaatttgt 13555  T

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