View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1633_high_25 (Length: 308)

Name: NF1633_high_25
Description: NF1633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1633_high_25
NF1633_high_25
[»] chr6 (46 HSPs)
chr6 (139-308)||(1376382-1376551)
chr6 (139-308)||(1384130-1384299)
chr6 (8-136)||(34873027-34873156)
chr6 (141-298)||(13422996-13423151)
chr6 (144-279)||(27612921-27613054)
chr6 (139-308)||(28630116-28630283)
chr6 (139-296)||(31869096-31869252)
chr6 (144-304)||(33651042-33651200)
chr6 (181-308)||(16337851-16337976)
chr6 (139-306)||(6531067-6531234)
chr6 (236-308)||(17551360-17551432)
chr6 (138-296)||(32316814-32316970)
chr6 (140-296)||(22079451-22079605)
chr6 (139-306)||(32459403-32459568)
chr6 (181-296)||(34047416-34047529)
chr6 (194-308)||(25127772-25127886)
chr6 (139-204)||(9082950-9083015)
chr6 (213-308)||(24900793-24900884)
chr6 (236-296)||(5080549-5080609)
chr6 (140-200)||(16337142-16337202)
chr6 (181-308)||(16367975-16368100)
chr6 (141-236)||(31760176-31760271)
chr6 (236-306)||(33421780-33421849)
chr6 (236-305)||(8505755-8505824)
chr6 (77-121)||(9919200-9919244)
chr6 (195-296)||(24979962-24980063)
chr6 (236-296)||(25811820-25811880)
chr6 (236-296)||(35213543-35213602)
chr6 (144-305)||(13143274-13143432)
chr6 (182-296)||(31883233-31883345)
chr6 (236-294)||(4820283-4820340)
chr6 (238-296)||(5327575-5327633)
chr6 (194-244)||(12588317-12588367)
chr6 (236-298)||(13658860-13658921)
chr6 (240-306)||(15318174-15318239)
chr6 (236-306)||(20822850-20822919)
chr6 (238-279)||(8173296-8173337)
chr6 (236-305)||(18141283-18141351)
chr6 (236-296)||(24842398-24842456)
chr6 (201-305)||(25142499-25142601)
chr6 (236-292)||(2075433-2075488)
chr6 (240-308)||(3552139-3552207)
chr6 (236-296)||(8645338-8645398)
chr6 (236-296)||(11547511-11547570)
chr6 (183-294)||(26595380-26595489)
chr6 (236-304)||(32046720-32046787)
[»] chr1 (87 HSPs)
chr1 (138-308)||(12999708-12999875)
chr1 (141-305)||(49931574-49931736)
chr1 (139-308)||(30973570-30973737)
chr1 (138-308)||(33076137-33076305)
chr1 (139-305)||(30536012-30536172)
chr1 (146-308)||(49446687-49446851)
chr1 (148-308)||(49020301-49020457)
chr1 (146-286)||(34817938-34818076)
chr1 (179-306)||(49570016-49570141)
chr1 (146-308)||(30745004-30745164)
chr1 (146-308)||(30766455-30766615)
chr1 (179-304)||(740880-741005)
chr1 (137-305)||(30519509-30519675)
chr1 (138-308)||(11947813-11947981)
chr1 (146-260)||(29359809-29359921)
chr1 (146-308)||(29877315-29877475)
chr1 (146-280)||(32831061-32831193)
chr1 (138-296)||(50775042-50775198)
chr1 (146-308)||(52437512-52437672)
chr1 (139-296)||(18434824-18434979)
chr1 (139-236)||(26501173-26501270)
chr1 (213-296)||(9987981-9988062)
chr1 (148-304)||(1689413-1689565)
chr1 (180-304)||(36750412-36750532)
chr1 (179-280)||(5771171-5771270)
chr1 (181-294)||(29359670-29359779)
chr1 (236-306)||(47820482-47820552)
chr1 (191-306)||(49559139-49559250)
chr1 (182-262)||(50242374-50242452)
chr1 (236-308)||(649786-649858)
chr1 (194-296)||(47721439-47721539)
chr1 (194-296)||(47728431-47728531)
chr1 (136-290)||(11597672-11597824)
chr1 (182-296)||(48261169-48261281)
chr1 (183-296)||(4466724-4466835)
chr1 (145-207)||(4629641-4629703)
chr1 (139-296)||(27464944-27465099)
chr1 (194-306)||(35136864-35136974)
chr1 (194-279)||(44517903-44517986)
chr1 (236-306)||(44789125-44789194)
chr1 (236-306)||(52362502-52362571)
chr1 (191-304)||(12306070-12306183)
chr1 (180-260)||(23665653-23665731)
chr1 (144-291)||(33358050-33358195)
chr1 (236-296)||(8411700-8411759)
chr1 (236-296)||(9008255-9008314)
chr1 (236-308)||(9566942-9567014)
chr1 (144-306)||(10889938-10890097)
chr1 (240-296)||(12798577-12798633)
chr1 (236-296)||(21340552-21340611)
chr1 (236-308)||(21433382-21433454)
chr1 (236-296)||(37588657-37588716)
chr1 (183-294)||(37619575-37619684)
chr1 (236-308)||(42812903-42812975)
chr1 (181-304)||(44723382-44723503)
chr1 (236-296)||(47214238-47214297)
chr1 (236-296)||(48325997-48326057)
chr1 (240-291)||(8454665-8454716)
chr1 (144-296)||(33024463-33024612)
chr1 (236-295)||(38303670-38303728)
chr1 (193-275)||(49065305-49065385)
chr1 (215-272)||(4776809-4776864)
chr1 (218-308)||(9897525-9897615)
chr1 (236-306)||(13489682-13489751)
chr1 (236-298)||(29586021-29586082)
chr1 (236-290)||(32960384-32960438)
chr1 (236-306)||(46911313-46911382)
chr1 (139-296)||(51286255-51286408)
chr1 (196-296)||(17082686-17082784)
chr1 (236-305)||(33054070-33054138)
chr1 (236-277)||(41677306-41677347)
chr1 (145-304)||(46281458-46281615)
chr1 (211-291)||(48220103-48220180)
chr1 (137-296)||(50328026-50328182)
chr1 (236-296)||(756886-756945)
chr1 (236-296)||(902668-902727)
chr1 (236-296)||(4514436-4514495)
chr1 (236-296)||(7128148-7128207)
chr1 (192-279)||(8846020-8846105)
chr1 (192-291)||(17652663-17652760)
chr1 (236-296)||(21486299-21486358)
chr1 (182-305)||(27533414-27533535)
chr1 (236-296)||(30735275-30735335)
chr1 (236-296)||(32915054-32915113)
chr1 (240-296)||(37685360-37685416)
chr1 (240-296)||(37700102-37700158)
chr1 (236-296)||(51191818-51191877)
[»] chr8 (62 HSPs)
chr8 (140-308)||(25830133-25830299)
chr8 (136-308)||(43715893-43716062)
chr8 (138-308)||(67046-67214)
chr8 (139-308)||(33539424-33539590)
chr8 (138-308)||(12655940-12656108)
chr8 (146-308)||(35067178-35067338)
chr8 (146-308)||(42786551-42786713)
chr8 (146-296)||(6440111-6440259)
chr8 (138-244)||(35792118-35792224)
chr8 (141-306)||(8671444-8671607)
chr8 (149-308)||(33100367-33100522)
chr8 (146-271)||(41639691-41639816)
chr8 (138-305)||(3270766-3270929)
chr8 (141-308)||(7814476-7814645)
chr8 (146-308)||(45405549-45405709)
chr8 (169-304)||(7777098-7777229)
chr8 (146-261)||(5574320-5574433)
chr8 (141-304)||(7795188-7795354)
chr8 (180-308)||(43285890-43286016)
chr8 (146-277)||(3413086-3413215)
chr8 (179-306)||(42619907-42620028)
chr8 (146-230)||(39453210-39453294)
chr8 (145-308)||(10644694-10644855)
chr8 (140-280)||(38675649-38675787)
chr8 (180-298)||(6972183-6972298)
chr8 (193-291)||(10902739-10902835)
chr8 (238-303)||(32752422-32752487)
chr8 (138-215)||(36969560-36969637)
chr8 (140-208)||(12339046-12339113)
chr8 (236-308)||(23754688-23754760)
chr8 (182-308)||(21526210-21526334)
chr8 (239-296)||(2730945-2731002)
chr8 (194-306)||(12734953-12735063)
chr8 (193-296)||(10731575-10731676)
chr8 (181-296)||(43397810-43397923)
chr8 (236-306)||(29991432-29991501)
chr8 (236-306)||(34718135-34718204)
chr8 (147-304)||(36611973-36612128)
chr8 (144-291)||(30439398-30439542)
chr8 (236-296)||(1633872-1633931)
chr8 (236-296)||(11017835-11017894)
chr8 (181-296)||(32501125-32501238)
chr8 (236-308)||(33279530-33279602)
chr8 (236-296)||(37942888-37942948)
chr8 (236-296)||(41159871-41159930)
chr8 (236-296)||(45529228-45529287)
chr8 (236-306)||(9549181-9549250)
chr8 (236-306)||(16872138-16872207)
chr8 (197-275)||(39856086-39856164)
chr8 (196-308)||(25987730-25987840)
chr8 (236-296)||(7592879-7592938)
chr8 (236-296)||(7955989-7956048)
chr8 (193-308)||(10839423-10839535)
chr8 (236-296)||(16966815-16966874)
chr8 (236-296)||(24798339-24798399)
chr8 (236-296)||(27325787-27325847)
chr8 (240-296)||(30136001-30136056)
chr8 (236-296)||(32847668-32847728)
chr8 (236-308)||(34018826-34018897)
chr8 (236-296)||(34186636-34186696)
chr8 (139-294)||(37133749-37133902)
chr8 (236-296)||(40739894-40739953)
[»] chr5 (56 HSPs)
chr5 (140-308)||(22098273-22098439)
chr5 (137-308)||(16690517-16690686)
chr5 (140-308)||(38293245-38293412)
chr5 (146-302)||(38493648-38493803)
chr5 (146-308)||(9168061-9168218)
chr5 (143-304)||(40364590-40364749)
chr5 (139-306)||(4088463-4088628)
chr5 (141-296)||(32639072-32639226)
chr5 (140-308)||(40829432-40829598)
chr5 (148-308)||(14321850-14322008)
chr5 (146-308)||(6758683-6758844)
chr5 (146-291)||(884476-884619)
chr5 (155-304)||(26686903-26687047)
chr5 (155-304)||(26956634-26956778)
chr5 (8-60)||(27947316-27947368)
chr5 (145-308)||(18695336-18695497)
chr5 (236-308)||(7287171-7287243)
chr5 (145-308)||(6940042-6940203)
chr5 (193-308)||(21156005-21156118)
chr5 (139-294)||(41175593-41175745)
chr5 (145-307)||(9939324-9939484)
chr5 (139-306)||(10649455-10649619)
chr5 (196-308)||(13089725-13089835)
chr5 (196-305)||(27546084-27546193)
chr5 (193-296)||(1079893-1079994)
chr5 (236-296)||(2688968-2689027)
chr5 (236-296)||(19521985-19522045)
chr5 (194-296)||(20770161-20770261)
chr5 (146-261)||(22529035-22529150)
chr5 (236-294)||(9581611-9581668)
chr5 (236-306)||(30640810-30640879)
chr5 (148-206)||(34940751-34940809)
chr5 (236-306)||(43441758-43441827)
chr5 (140-296)||(28306020-28306174)
chr5 (191-267)||(41699512-41699586)
chr5 (193-296)||(4719680-4719781)
chr5 (193-296)||(5168212-5168313)
chr5 (236-296)||(15267814-15267873)
chr5 (236-296)||(16437546-16437606)
chr5 (236-296)||(35098987-35099046)
chr5 (182-280)||(13309928-13310024)
chr5 (182-294)||(19844240-19844348)
chr5 (194-279)||(2678025-2678108)
chr5 (236-306)||(6517732-6517801)
chr5 (236-294)||(6931041-6931098)
chr5 (236-294)||(18842303-18842360)
chr5 (139-296)||(26791131-26791286)
chr5 (144-255)||(15952937-15953046)
chr5 (194-280)||(4771543-4771627)
chr5 (236-296)||(17402903-17402963)
chr5 (193-296)||(18660788-18660889)
chr5 (237-308)||(32873134-32873202)
chr5 (181-280)||(33958188-33958285)
chr5 (236-280)||(35567546-35567590)
chr5 (193-280)||(39054632-39054717)
chr5 (236-296)||(39628819-39628878)
[»] chr3 (83 HSPs)
chr3 (139-308)||(49761073-49761239)
chr3 (139-308)||(37894128-37894296)
chr3 (141-308)||(48944599-48944763)
chr3 (139-308)||(52100279-52100445)
chr3 (140-296)||(16479661-16479816)
chr3 (139-308)||(45186438-45186605)
chr3 (139-308)||(52485490-52485657)
chr3 (138-304)||(33796288-33796452)
chr3 (138-306)||(54099242-54099408)
chr3 (173-305)||(45657690-45657820)
chr3 (138-308)||(26772386-26772555)
chr3 (155-308)||(26550255-26550406)
chr3 (143-279)||(23868869-23869003)
chr3 (146-306)||(36755944-36756102)
chr3 (146-308)||(1436834-1436994)
chr3 (146-308)||(26452616-26452776)
chr3 (146-305)||(51698877-51699036)
chr3 (180-306)||(52714753-52714877)
chr3 (138-296)||(34592093-34592250)
chr3 (139-297)||(35376968-35377124)
chr3 (180-306)||(48353016-48353140)
chr3 (180-306)||(49021731-49021855)
chr3 (139-301)||(29780922-29781082)
chr3 (180-305)||(29916955-29917074)
chr3 (180-305)||(29966108-29966227)
chr3 (191-308)||(52963254-52963369)
chr3 (146-308)||(29573249-29573409)
chr3 (180-305)||(19150247-19150369)
chr3 (193-305)||(44813388-44813496)
chr3 (191-308)||(48287689-48287804)
chr3 (148-244)||(36907120-36907216)
chr3 (194-306)||(21196144-21196254)
chr3 (238-308)||(48405428-48405498)
chr3 (181-296)||(5244258-5244371)
chr3 (236-296)||(8821660-8821719)
chr3 (236-296)||(49167780-49167840)
chr3 (145-280)||(1261112-1261247)
chr3 (139-255)||(36121891-36122005)
chr3 (240-298)||(26996344-26996401)
chr3 (236-306)||(31376747-31376816)
chr3 (215-296)||(37302575-37302654)
chr3 (211-296)||(42358597-42358680)
chr3 (139-296)||(44855982-44856137)
chr3 (196-308)||(10811153-10811263)
chr3 (236-297)||(11633642-11633702)
chr3 (144-291)||(24095298-24095442)
chr3 (240-308)||(3648597-3648665)
chr3 (236-296)||(6093860-6093920)
chr3 (139-305)||(6999190-6999354)
chr3 (181-296)||(20547919-20548032)
chr3 (236-296)||(21195872-21195932)
chr3 (236-296)||(26014841-26014901)
chr3 (236-296)||(41505520-41505580)
chr3 (147-308)||(47742302-47742459)
chr3 (211-296)||(6178384-6178467)
chr3 (194-244)||(12762631-12762681)
chr3 (236-298)||(28419196-28419257)
chr3 (236-294)||(39338709-39338767)
chr3 (236-306)||(45054994-45055063)
chr3 (236-306)||(50206952-50207021)
chr3 (238-296)||(54773737-54773795)
chr3 (236-306)||(55400019-55400088)
chr3 (191-275)||(658744-658826)
chr3 (236-305)||(27718768-27718836)
chr3 (196-296)||(34456820-34456918)
chr3 (211-279)||(50314671-50314737)
chr3 (211-279)||(3518566-3518633)
chr3 (183-223)||(5527444-5527484)
chr3 (236-296)||(30909059-30909118)
chr3 (236-296)||(37927187-37927246)
chr3 (236-296)||(39629820-39629880)
chr3 (236-296)||(44677466-44677525)
chr3 (180-236)||(44962113-44962169)
chr3 (236-296)||(45711421-45711481)
chr3 (236-296)||(46019492-46019551)
chr3 (236-296)||(46623936-46623996)
chr3 (236-296)||(49363233-49363292)
chr3 (236-296)||(49417605-49417664)
chr3 (142-174)||(51771354-51771386)
chr3 (138-206)||(52089820-52089888)
chr3 (236-296)||(52326048-52326108)
chr3 (196-279)||(53870976-53871057)
chr3 (236-280)||(54195385-54195429)
[»] chr4 (73 HSPs)
chr4 (139-304)||(1795868-1796031)
chr4 (139-307)||(49585013-49585179)
chr4 (140-308)||(11546788-11546955)
chr4 (148-308)||(48649536-48649694)
chr4 (140-291)||(50980625-50980774)
chr4 (140-305)||(44257618-44257780)
chr4 (140-296)||(55609052-55609207)
chr4 (146-305)||(16019497-16019654)
chr4 (139-305)||(36123347-36123510)
chr4 (141-296)||(193562-193715)
chr4 (146-308)||(15522372-15522532)
chr4 (144-308)||(32223949-32224110)
chr4 (146-304)||(47015029-47015183)
chr4 (140-308)||(19165319-19165480)
chr4 (139-308)||(20118799-20118968)
chr4 (181-296)||(39478464-39478579)
chr4 (140-307)||(34363572-34363735)
chr4 (155-262)||(46665097-46665202)
chr4 (146-308)||(31468882-31469042)
chr4 (168-308)||(31574855-31574993)
chr4 (138-296)||(50831641-50831797)
chr4 (146-306)||(37514025-37514183)
chr4 (145-304)||(42815426-42815583)
chr4 (139-296)||(624198-624353)
chr4 (139-296)||(9118751-9118905)
chr4 (181-296)||(10250444-10250557)
chr4 (146-261)||(34757802-34757915)
chr4 (146-261)||(34759076-34759189)
chr4 (192-305)||(38792831-38792939)
chr4 (236-308)||(47288100-47288172)
chr4 (198-296)||(50890019-50890115)
chr4 (236-296)||(5622487-5622547)
chr4 (213-296)||(7632422-7632503)
chr4 (181-260)||(10474041-10474118)
chr4 (183-278)||(19232065-19232157)
chr4 (194-296)||(28458318-28458418)
chr4 (236-308)||(32696771-32696842)
chr4 (240-308)||(37060335-37060403)
chr4 (198-296)||(336753-336849)
chr4 (148-305)||(3078803-3078958)
chr4 (183-296)||(37997285-37997394)
chr4 (237-296)||(50721727-50721786)
chr4 (194-262)||(12138916-12138983)
chr4 (139-296)||(23369219-23369374)
chr4 (203-296)||(38338873-38338963)
chr4 (236-296)||(30079876-30079935)
chr4 (236-296)||(30170002-30170061)
chr4 (236-304)||(40427972-40428039)
chr4 (236-280)||(51908556-51908600)
chr4 (194-298)||(39654847-39654953)
chr4 (236-298)||(2268489-2268551)
chr4 (236-306)||(2999132-2999201)
chr4 (240-294)||(6520817-6520871)
chr4 (183-280)||(12387596-12387691)
chr4 (236-306)||(21617203-21617272)
chr4 (215-296)||(26910231-26910310)
chr4 (236-298)||(36111377-36111439)
chr4 (148-296)||(52895257-52895404)
chr4 (236-305)||(13086043-13086111)
chr4 (240-305)||(21392591-21392656)
chr4 (232-273)||(41678852-41678893)
chr4 (212-280)||(50608584-50608650)
chr4 (181-280)||(1627487-1627584)
chr4 (240-308)||(1799539-1799607)
chr4 (145-308)||(34995338-34995499)
chr4 (236-296)||(37297078-37297138)
chr4 (140-236)||(42491161-42491257)
chr4 (236-296)||(43175013-43175073)
chr4 (236-296)||(46405956-46406015)
chr4 (193-296)||(46634129-46634230)
chr4 (193-308)||(51255764-51255877)
chr4 (236-280)||(51573614-51573657)
chr4 (239-291)||(53654735-53654786)
[»] scaffold0053 (1 HSPs)
scaffold0053 (140-308)||(12515-12681)
[»] chr2 (69 HSPs)
chr2 (139-308)||(12784283-12784452)
chr2 (139-280)||(45420181-45420320)
chr2 (138-280)||(3771417-3771557)
chr2 (143-304)||(4657323-4657482)
chr2 (139-308)||(29449229-29449395)
chr2 (146-308)||(42532632-42532792)
chr2 (139-291)||(40700230-40700380)
chr2 (139-255)||(17999564-17999678)
chr2 (140-271)||(1040568-1040697)
chr2 (146-304)||(19843506-19843662)
chr2 (146-308)||(21738511-21738669)
chr2 (179-306)||(18737800-18737925)
chr2 (146-280)||(7084608-7084740)
chr2 (180-298)||(33616493-33616611)
chr2 (146-305)||(12070870-12071025)
chr2 (180-306)||(36774558-36774682)
chr2 (139-304)||(14328403-14328566)
chr2 (180-308)||(6336270-6336394)
chr2 (145-308)||(5031941-5032102)
chr2 (146-234)||(26290744-26290832)
chr2 (146-229)||(43658605-43658688)
chr2 (180-308)||(40599208-40599331)
chr2 (139-306)||(15269881-15270045)
chr2 (138-221)||(4319809-4319892)
chr2 (194-296)||(28245758-28245857)
chr2 (139-304)||(36190907-36191071)
chr2 (194-296)||(39147795-39147895)
chr2 (203-291)||(10472098-10472184)
chr2 (193-293)||(29349538-29349636)
chr2 (206-306)||(36802916-36803013)
chr2 (181-296)||(9207619-9207732)
chr2 (180-306)||(16799692-16799815)
chr2 (138-296)||(27490616-27490772)
chr2 (183-308)||(37966603-37966724)
chr2 (180-306)||(45259216-45259336)
chr2 (236-294)||(4758621-4758678)
chr2 (139-296)||(18254096-18254251)
chr2 (236-306)||(39449099-39449168)
chr2 (167-291)||(4138101-4138222)
chr2 (145-308)||(34134663-34134824)
chr2 (236-305)||(38560699-38560767)
chr2 (236-280)||(1352434-1352478)
chr2 (193-291)||(4952420-4952516)
chr2 (139-291)||(23352794-23352941)
chr2 (236-296)||(28679346-28679406)
chr2 (139-215)||(40357973-40358049)
chr2 (236-308)||(41042272-41042343)
chr2 (236-296)||(44977481-44977541)
chr2 (144-296)||(18176970-18177119)
chr2 (236-291)||(18876903-18876958)
chr2 (236-306)||(6999050-6999119)
chr2 (203-296)||(7574465-7574555)
chr2 (240-306)||(22525980-22526045)
chr2 (140-296)||(23690396-23690551)
chr2 (240-305)||(6742396-6742460)
chr2 (168-213)||(18982951-18982996)
chr2 (239-308)||(24766170-24766239)
chr2 (181-297)||(28494888-28495002)
chr2 (238-291)||(36644063-36644116)
chr2 (236-305)||(39213752-39213820)
chr2 (236-304)||(40635735-40635804)
chr2 (238-306)||(2841854-2841921)
chr2 (256-308)||(6639474-6639525)
chr2 (181-260)||(7663995-7664072)
chr2 (236-296)||(9990720-9990780)
chr2 (250-290)||(37085217-37085257)
chr2 (147-215)||(39309518-39309586)
chr2 (236-280)||(42372525-42372569)
chr2 (240-296)||(44254629-44254684)
[»] chr7 (57 HSPs)
chr7 (146-306)||(35822868-35823026)
chr7 (149-304)||(44496699-44496852)
chr7 (146-308)||(42584820-42584980)
chr7 (140-296)||(31398153-31398308)
chr7 (180-306)||(40854582-40854706)
chr7 (146-308)||(41430045-41430205)
chr7 (138-305)||(26018061-26018226)
chr7 (148-260)||(41590415-41590525)
chr7 (139-271)||(48145579-48145697)
chr7 (146-308)||(36352477-36352640)
chr7 (180-305)||(47954029-47954152)
chr7 (180-304)||(42598135-42598257)
chr7 (138-308)||(46259979-46260145)
chr7 (146-304)||(34507099-34507255)
chr7 (144-260)||(41589977-41590088)
chr7 (145-308)||(1471183-1471344)
chr7 (182-308)||(18111540-18111665)
chr7 (150-308)||(46829497-46829653)
chr7 (145-294)||(33774970-33775118)
chr7 (139-305)||(9363408-9363570)
chr7 (236-308)||(31445335-31445407)
chr7 (194-296)||(41018693-41018793)
chr7 (146-308)||(34108750-34108908)
chr7 (140-308)||(43159463-43159628)
chr7 (149-262)||(44651126-44651236)
chr7 (138-296)||(41458626-41458781)
chr7 (178-305)||(47012495-47012620)
chr7 (191-296)||(4292458-4292560)
chr7 (181-291)||(3937052-3937158)
chr7 (191-280)||(29855272-29855361)
chr7 (236-305)||(38340364-38340433)
chr7 (240-308)||(6269384-6269452)
chr7 (138-291)||(7817672-7817821)
chr7 (236-308)||(17002354-17002426)
chr7 (139-296)||(19785966-19786120)
chr7 (211-296)||(30941415-30941502)
chr7 (240-308)||(33578300-33578368)
chr7 (236-296)||(39231710-39231769)
chr7 (238-306)||(41893935-41894002)
chr7 (236-296)||(43573525-43573584)
chr7 (181-296)||(44895501-44895614)
chr7 (236-279)||(20337357-20337400)
chr7 (236-279)||(21023099-21023141)
chr7 (236-306)||(13729746-13729815)
chr7 (168-254)||(19562262-19562348)
chr7 (211-296)||(46578094-46578177)
chr7 (144-255)||(3062400-3062509)
chr7 (196-308)||(47448844-47448954)
chr7 (236-305)||(48062077-48062146)
chr7 (236-296)||(4713603-4713662)
chr7 (193-308)||(12007126-12007239)
chr7 (236-296)||(13152622-13152682)
chr7 (236-296)||(28036774-28036833)
chr7 (236-288)||(35072344-35072396)
chr7 (240-308)||(38259081-38259149)
chr7 (236-296)||(39332015-39332074)
chr7 (236-296)||(44184541-44184600)
[»] scaffold0687 (2 HSPs)
scaffold0687 (141-308)||(7078-7247)
scaffold0687 (236-296)||(2227-2286)
[»] scaffold0662 (1 HSPs)
scaffold0662 (146-304)||(1168-1322)
[»] scaffold0013 (1 HSPs)
scaffold0013 (182-262)||(94811-94889)
[»] scaffold0532 (1 HSPs)
scaffold0532 (236-296)||(10994-11053)
[»] scaffold0027 (1 HSPs)
scaffold0027 (246-304)||(121657-121715)
[»] scaffold0003 (1 HSPs)
scaffold0003 (251-308)||(366312-366368)


Alignment Details
Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 1376551 - 1376382
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |    
T  1376551 agagtagtgttatttgaacatcaatttgcttgacaactaaatggacaaccacatttttacaaagaaaaatatgtattgacacaaatataaaagtaataga 1376452  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||||||||||||||| || ||| | |||||||| ||| |||||||||||||||||||||||    
T  1376451 gagagataaagtaaaaatataatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggtt 1376382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 1384299 - 1384130
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |    
T  1384299 agagtagtgttatttgaacatcaatttgcttgacaactaaatggacaaccacatttttacaaagaaaaatatgtattgacacaaatataaaagtaataga 1384200  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||||||||||||||| || ||| | |||||||| ||| |||||||||||||||||||||||    
T  1384199 gagagataaagtaaaaatataatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggtt 1384130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 34873027 - 34873156
Alignment:
Q  8 tgagatgaaatgataatgcaaagacgagaatttcaaaaacaaacggcatgtatggtttttaattatgaaatagaactgatgtctccgtagtaaactaagg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  34873027 tgagatgaaatgataatgcaaagacgagaatttcaaaaacaaacggcatgtatggattttgattatgaaatagaactgatgcctccgtagtaaactaagg 34873126  T
Q  108 tagatgataga-tatatattagccattgtt 136  Q
    ||| ||||||| ||| ||||||||||||||    
T  34873127 tagttgatagattatgtattagccattgtt 34873156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 298
Target Start/End: Complemental strand, 13423151 - 13422996
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatataga 240  Q
    |||||||||||||||||||| ||||  |||||||| || | |||||| | ||||||||||||||||||||||||||||||||| |  ||| ||  |||||    
T  13423151 agtagtgttatttgaacatccatttatttgacaaccaagtggacaactatatttttacaaagaaaaatatgtattggcacaaaaactaaaata--ataga 13423054  T
Q  241 gagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtta 298  Q
    |||| ||||||||||||||||| || ||||| |||||||| ||| |||||| ||||||    
T  13423053 gagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattgtta 13422996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 279
Target Start/End: Complemental strand, 27613054 - 27612921
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    ||||||||||||||||| ||||| |||||||  |||| |||||||| || ||||||||||||||||||||||| ||| || |||||||||||| | | ||    
T  27613054 agtgttatttgaacatctatttgtttgacaatcaaatggacaaccatatgtttacaaagaaaaatatgtattgacacgaaaatcaaagtaatagaaaaag 27612955  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    ||||  ||||||||||||| |||||||| |||||||    
T  27612954 ataa--taaaaatataatgtgaatatgagagagaaa 27612921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 28630283 - 28630116
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||| |||||| |||||||| |||||  |||||||||||| |||||||| ||||||||||| ||||  |||| |||||||||| |||||||||  |||    
T  28630283 agagtaatgttatatgaacatctatttgtgtgacaactaaatagacaaccatatttttacaaataaaagcatgtgttggcacaaaaatcaaagta--ata 28630186  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    || ||| |||||||| |||||||| || ||||| |||||||| ||| |||||| ||  || |||||||||    
T  28630185 gaaagagaaagtaaatatataatgtgagtatgagagagaaagttgtcacaaaaattactataaaatggtt 28630116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 31869252 - 31869096
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||| |||||||||||||  |||| ||||  |   ||||||||||| ||||||||||||||||| || |||||||||||| |    
T  31869252 agagtagtgttatttgaacatctatttgcttgacaatcaaatagacactcttgtttttacaaaggaaaatatgtattggcacgaaaatcaaagtaataga 31869153  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||| |||  ||||||  |||  || ||||| |||||||| ||| |||||||||||    
T  31869152 gagaga-aaataaaaaatgaaatatgagtatgagagagaaagttgtcacaaaagttgt 31869096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 33651200 - 33651042
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    ||||||||||||||||| ||||| |||||||  |||| |||||||| |||||||||||||||| |||||||||| ||||| |  ||  ||  |||||||     
T  33651200 agtgttatttgaacatccatttgtttgacaatcaaatagacaaccatatttttacaaagaaaattatgtattggtacaaaaactaagata--atagagat 33651103  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    | ||| ||||||||||||| || ||| | |||||||| ||| |||||| || ||| |||||    
T  33651102 aaaaaataaaaatataatgtgagtattagagagaaagttgtcacaaaaattattacaaaat 33651042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 16337851 - 16337976
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||||||||||||||||||||||  ||||||||| ||| || | |||   ||||  ||||||  |||||||||||||||| || ||||| ||||||||    
T  16337851 tgacaaccacatttttacaaagaaatgtatgtattgacacgaaaaccaagacaatagtgagaga--aagtaaaaatataatgtgagtatgagagagaaag 16337948  T
Q  281 gtgttacaaaagttgttagaaaatggtt 308  Q
     ||||||||||||| ||| |||||||||    
T  16337949 ttgttacaaaagttattataaaatggtt 16337976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 306
Target Start/End: Original strand, 6531067 - 6531234
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaat-a 236  Q
    |||| ||||||||||||||| | ||||| |||| ||||||   |||||||| |  |||||||||||||| |||||||| |||| || ||||||| ||| |    
T  6531067 agaggagtgttatttgaacaaccatttggttgataactaatgggacaaccata-atttacaaagaaaaagtatgtatttgcacgaaaatcaaagcaataa 6531165  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||| |||||| || ||||| |||||||| |||  || ||||||| | |||||||    
T  6531166 tagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcccataagttgtcacaaaatgg 6531234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 17551360 - 17551432
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||||||||||||||| | |||||||||    
T  17551360 atagagagataaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggtt 17551432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 32316814 - 32316970
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||| |||||||||||||||| || |   ||||||||    ||||||||| | ||||||||||||||  | ||| || |||||| | ||||| ||||     
T  32316814 tagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtactgacacaaaaaccaaagcaata- 32316912  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
     ||||||||||||||||| |||||| || |||||||||||||| ||| || ||||||||    
T  32316913 -gagagataaagtaaaaagataatgtgagtatgaaagagaaagctgtcactaaagttgt 32316970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 296
Target Start/End: Original strand, 22079451 - 22079605
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||| |||||||||||||||| ||||   |||| |||    ||||||||| | |||| |||||||||  |||||||| |||||| ||||||| |||| ||    
T  22079451 gagttgtgttatttgaacatccatttagatgaccacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaaagcaatagag 22079550  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||  ||||||||| |||||| || | ||| |||||||| ||| |||||||||||    
T  22079551 agaga--aagtaaaaacataatgtgagtgtgagagagaaagttgtcacaaaagttgt 22079605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 306
Target Start/End: Original strand, 32459403 - 32459568
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatg-tattggcacaaatatcaaagtaatat 237  Q
    |||| ||||||||||||||| ||||||| |||||||||     |||||||| | ||| |||||||||||  || |||| |||| || | ||||| ||||     
T  32459403 agaggagtgttatttgaacaacaatttgattgacaacttttaggacaaccataattt-acaaagaaaaagttggtatttgcacgaaaaccaaagcaata- 32459500  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
     |||||||||||||||||  ||||| |||||||| |||||||| ||| ||||||||||| | |||||||    
T  32459501 -gagagataaagtaaaaaagtaatgtgaatatgagagagaaagttgtcacaaaagttgtcataaaatgg 32459568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 34047529 - 34047416
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | ||||||||||||||| |  |||||||||||| | ||||| ||||  |||||||||  |||||| |||||| || ||||| ||||||||    
T  34047529 tgacaaccaaaattttacaaagaaaaagagatattggcacaaaaaccaaagcaata--gagagataagataaaaagataatgtgagtatgagagagaaag 34047432  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  34047431 ttgtcacaaaagttgt 34047416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 308
Target Start/End: Original strand, 25127772 - 25127886
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagt 293  Q
    ||||||||||||| || |||||| |||  | | ||||| |||| ||||||| |||||||||| |||||| || ||| | |||||||| | | ||||||||    
T  25127772 tttacaaagaaaagtaggtattgacacggaaaccaaagcaatagagagagagaaagtaaaaacataatgtgagtatcagagagaaagttttcacaaaagt 25127871  T
Q  294 tgttagaaaatggtt 308  Q
    ||||| |||||||||    
T  25127872 tgttacaaaatggtt 25127886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 9082950 - 9083015
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaa 204  Q
    |||||||||||||||||||||||||||   ||| ||| |||| |||||||||||||||||| ||||    
T  9082950 agagtagtgttatttgaacatcaatttatgtgataaccaaatggacaaccacatttttacacagaa 9083015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 24900884 - 24900793
Alignment:
Q  213 attggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||| | ||||| |  ||||||||| ||||||||||||||||| |||||||||  |||||| ||| ||||||||||| | |||||||||    
T  24900884 attggcacaaaaaccaaagca--atagagagagaaagtaaaaatataatgtgaatatgaa--agaaagttgtcacaaaagttgtcaaaaaatggtt 24900793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 5080549 - 5080609
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || |||||||||||||| ||| |||||||||||    
T  5080549 atagagagagaaagtaaaaaaataatgtgagtatgaaagagaaagttgtcacaaaagttgt 5080609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 16337202 - 16337142
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaa 200  Q
    ||||||||||||||||||||| ||||  |||||||| |||| |||||||| ||||||||||    
T  16337202 gagtagtgttatttgaacatccatttaattgacaaccaaatagacaaccatatttttacaa 16337142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 16367975 - 16368100
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||| |||||||||| |||||||  ||||||||| |||||| | |||   ||||  ||||||  |||||||||||||||| || ||||| | ||||||    
T  16367975 tgacaatcacatttttataaagaaatgtatgtattgacacaaaaaccaagacaatagtgagaga--aagtaaaaatataatgtgagtatgagaaagaaag 16368072  T
Q  281 gtgttacaaaagttgttagaaaatggtt 308  Q
     |||||||||| || ||| |||||||||    
T  16368073 ttgttacaaaaattattataaaatggtt 16368100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 31760176 - 31760271
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaata 236  Q
    |||||||||||||||||||| ||||| |||||||| ||||  |||||||| ||| |||||| |||  ||| ||||| || ||| | ||||||||||    
T  31760176 agtagtgttatttgaacatccatttgtttgacaaccaaataaacaaccacgtttatacaaaaaaatgtatatattgacataaaaaccaaagtaata 31760271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 33421849 - 33421780
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| || ||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  33421849 atagagagataaagtaaaaa-atgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatgg 33421780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 8505755 - 8505824
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||| |||||||||  |||||| |||||||| |||||||| ||| ||||||||||| | ||||||    
T  8505755 atagagagaaaaagtaaaaggataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatg 8505824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 9919244 - 9919200
Alignment:
Q  77 atagaactgatgtctccgtagtaaactaaggtagatgatagatat 121  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||    
T  9919244 atagaagtgatgcctccgtagtaaactaaggtagttgatagatat 9919200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 24980063 - 24979962
Alignment:
Q  195 ttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgtt-acaaaag 292  Q
    ||||||||||||| ||||||||| ||  || ||||||||||||  ||||||||||| ||||| |||| | || ||||||||||||| || || |||||||    
T  24980063 ttacaaagaaaaagtatgtattgacatgaaaatcaaagtaata--gagagataaaggaaaaacataacgtgagtatgaaagagaaaagttttcacaaaag 24979966  T
Q  293 ttgt 296  Q
    ||||    
T  24979965 ttgt 24979962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 25811820 - 25811880
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  25811820 atagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 25811880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 35213543 - 35213602
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| |||||||||||||||    
T  35213543 atagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgttacaaaagttgt 35213602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 13143274 - 13143432
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||| | ||||| |||||||||     |||||||| | ||| ||||||||||| | |||||| |||| || ||||||| ||||  ||||    
T  13143274 agtgttatttgaacaaccatttggttgacaacttttgggacaaccataattt-acaaagaaaaagtttgtatttgcacgaaaatcaaagcaata--gaga 13143370  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||||||||||  ||||| || ||||| |||||||| |||| ||||| |||| | ||||||    
T  13143371 gataaagtaaaaa-gtaatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaatg 13143432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 31883233 - 31883345
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaagg 281  Q
    |||||||| | ||||||||||||||| | || ||| |||||| ||||||| |  ||||||||| |||||||| | || ||| || ||||| ||  ||||     
T  31883233 gacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagca--atagagagagaaagtaaatacatgatgtgagtatgagaggaaaagt 31883330  T
Q  282 tgttacaaaagttgt 296  Q
    |||||||||||||||    
T  31883331 tgttacaaaagttgt 31883345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 4820340 - 4820283
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||    
T  4820340 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagtt 4820283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 5327575 - 5327633
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||| |||||  || ||||| |||||||| ||||| |||||||||    
T  5327575 agagagataaagtaaaaaaataatatgagtatgagagagaaagttgttataaaagttgt 5327633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 12588317 - 12588367
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    |||||||||||| ||||||| ||||||||| ||||||| |||| |||||||    
T  12588317 tttacaaagaaatatatgtagtggcacaaaaatcaaagcaatagagagaga 12588367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 13658921 - 13658860
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtta 298  Q
    |||||||||| ||||||||| |||||| || |||||||||||||| ||| |||| ||||||||    
T  13658921 atagagagatcaagtaaaaa-ataatgtgagtatgaaagagaaagttgtcacaatagttgtta 13658860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 15318174 - 15318239
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||| | |||||| |||||||| |||||||| ||| ||||||||||| | |||||||    
T  15318174 agagataaagtaaata-ataatgtgaatatgagagagaaagttgtaacaaaagttgtcacaaaatgg 15318239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 20822850 - 20822919
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  20822850 atagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgg 20822919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 8173296 - 8173337
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    ||||||| | ||||||||||||||| ||||||||||||||||    
T  8173296 agagagagatagtaaaaatataatgtgaatatgaaagagaaa 8173337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 18141283 - 18141351
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| ||||||||||| | ||||||    
T  18141283 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatg 18141351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 24842456 - 24842398
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||  |||||| || ||||| |||||||| ||| |||||||||||    
T  24842456 atagagagataaagtaaaa--ataatgtgagtatgagagagaaagctgtcacaaaagttgt 24842398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 25142499 - 25142601
Alignment:
Q  201 agaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttaga 300  Q
    |||||||||| ||||| ||| || |||||| ||||| ||| |||  ||||||||||||||||| |  |||| |||||||  ||| |||||| |||||| |    
T  25142499 agaaaaatatatattgacacgaaaatcaaactaatagagaaaga--aagtaaaaatataatgcaagcatgagagagaaaattgtcacaaaaattgttata 25142596  T
Q  301 aaatg 305  Q
    |||||    
T  25142597 aaatg 25142601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 2075433 - 2075488
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||    
T  2075433 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaag 2075488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 3552139 - 3552207
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| ||||||||||||||||| || ||| ||| |||||   || ||||||||||||| |||||||||    
T  3552139 agagagaaagtaaaaatataatgtgagtataaaaaagaaaatagtcacaaaagttgttaaaaaatggtt 3552207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 8645398 - 8645338
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||  |||||| || ||||| |||||||| ||| |||||||||||    
T  8645398 atagagagagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaagttgt 8645338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 11547511 - 11547570
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||  |||| ||||||||||    
T  11547511 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgttgcaaaagttgt 11547570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 26595489 - 26595380
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggt 282  Q
    ||||||| | ||||||||||||||  | |||||| |||||| | ||||| |  ||||||||| |||||||||| |||||| || ||||| ||| |||  |    
T  26595489 acaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagca--atagagagagaaagtaaaaacataatgtgagtatgagagaaaaaatt 26595392  T
Q  283 gttacaaaagtt 294  Q
    |||| |||||||    
T  26595391 gttataaaagtt 26595380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 32046787 - 32046720
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||||||||||||||| |||||| || ||||| |||||| | ||| ||| ||||||||| |||||    
T  32046787 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaggttgtcacataagttgttacaaaat 32046720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 9e-64; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 138 - 308
Target Start/End: Original strand, 12999708 - 12999875
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  12999708 tagagtagtgttatttgaacatcaatttgcttgacaactaaatggacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagta--at 12999805  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||| ||| ||||||||||||||||| || ||||| |||||||| || ||||||||||||||||||||||||    
T  12999806 agaaagagaaagtaaaaatataatgtgagtatgagagagaaagttg-tacaaaagttgttagaaaatggtt 12999875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 141 - 305
Target Start/End: Complemental strand, 49931736 - 49931574
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatataga 240  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||   ||||    
T  49931736 agtagtgttatttgaacatcaatttgcttgataactaaatggacaaccacatttttccaaagaaaagtatgtattggcacaaatatcaaagta--ttaga 49931639  T
Q  241 gagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||| ||||||    
T  49931638 gagataaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatg 49931574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 30973737 - 30973570
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||  |||    
T  30973737 agagtagtgttatttgaacatcaatttgcttgacaactaaatggacaatcacatttttacaaagaaaagtatgtattgacacaaatatcaaagta--ata 30973640  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| ||| ||||||||||||  || |||||||||||||| ||| |||||| ||||||||||| ||||    
T  30973639 gagagaaaaaataaaaatataatatgagtatgaaagagaaagttgtcacaaaaattgttagaaaagggtt 30973570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 138 - 308
Target Start/End: Complemental strand, 33076305 - 33076137
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||| |||||||||||||||||||||||||||| || ||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||    
T  33076305 tagagcagtgttatttgaacatcaatttgcttgataattaaatggacaaccacaattttacaaagaaaattatgtattggcacaaatatcaaagta--at 33076208  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||| ||| ||||||||||||| || ||||| |||||||| ||| | |||||||||||||||||||||    
T  33076207 agagagagaaaataaaaatataatgtgagtatgatagagaaagttgtcataaaagttgttagaaaatggtt 33076137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 139 - 305
Target Start/End: Complemental strand, 30536172 - 30536012
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||       
T  30536172 agagtagtgttatttgaacatcaatttgcttaacaactaaacggacaaccacatttttacaaagaaaagtatg--ttggcacaaatatcaaagtaat--- 30536078  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
     ||||| ||||||||||||||||| || ||||| |||||||| ||| |||||| |||||| ||||||    
T  30536077 -agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattgttaaaaaatg 30536012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 49446687 - 49446851
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa----tatgtattggcacaaatatcaaagtaatatagag 241  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    ||||||||||||||||||||||||||  ||||||    
T  49446687 tgttatttgaacatcaatttgcttgacaactaaatggacaatcacatttttacaaagaaaaatatgtatgtattggcacaaatatcaaagta--atagag 49446784  T
Q  242 agataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||| |||||||||||||||||  | ||||| |||||||| ||| |||||| ||| || |||||||||    
T  49446785 agagaaagtaaaaatataatgtaagtatgagagagaaagttgtcacaaaaattggtacaaaatggtt 49446851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 148 - 308
Target Start/End: Original strand, 49020301 - 49020457
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataa 247  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||| | ||||  |||    ||||| ||    
T  49020301 ttatttgaacatcaatttggttgacaaccaaattgacaaccatatttttacaaagaaaaatatatattggcacaaaaaccaaaacaat----agagagaa 49020396  T
Q  248 agtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    || |||||||||||| || ||||| ||| |||  ||| ||||||||||||| |||||||||    
T  49020397 agaaaaaatataatgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggtt 49020457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 286
Target Start/End: Original strand, 34817938 - 34818076
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||  |||||||  | ||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |  ||||| |||     
T  34817938 tgttatttgaacatcaatttagttgacaatcatattgacaaccatatttttacaaagaaaaatatgtgttggcacaaaaatcaaagca--atagaaagag 34818035  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgtta 286  Q
    ||||||||||||||||  || ||||| |||||||| |||||    
T  34818036 aaagtaaaaatataatatgagtatgagagagaaagttgtta 34818076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 49570141 - 49570016
Alignment:
Q  179 attgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaa 278  Q
    ||||||||||| ||||||| |||||||| ||||| |||||||||| ||||||  |||| |||||||  |||||||||||||||| |||||||| ||||||    
T  49570141 attgacaaccatatttttataaagaaaagtatgtgttggcacaaaaatcaaaacaatagagagaga--aagtaaaaatataatgtgaatatgagagagaa 49570044  T
Q  279 aggtgttacaaaagttgttagaaaatgg 306  Q
    || ||| |||||||||||||| ||||||    
T  49570043 agttgtcacaaaagttgttaggaaatgg 49570016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 30745164 - 30745004
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||| |||||| |||||||| | || |||||||| | | |||||||||||| ||||||||| |||||| | ||||  ||||  |||||||    
T  30745164 tgttatttgaacattaatttgattgacaaccatatagacaaccatactcttacaaagaaaattatgtattgacacaaaaaccaaaacaata--gagagat 30745067  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| ||||||  || ||||| |||||||| ||| ||||||||| |||||||||||||    
T  30745066 aaagtaaaattataatatgagtatgatagagaaagttgtcacaaaagttattagaaaatggtt 30745004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 30766615 - 30766455
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||| |||||| |||||||| | || |||||||| | | |||||||||||| ||||||||| |||||| | ||||  ||||  |||||||    
T  30766615 tgttatttgaacattaatttgattgacaaccatatagacaaccatactcttacaaagaaaattatgtattgacacaaaaaccaaaacaata--gagagat 30766518  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| ||||||  || ||||| |||||||| ||| ||||||||| |||||||||||||    
T  30766517 aaagtaaaattataatatgagtatgatagagaaagttgtcacaaaagttattagaaaatggtt 30766455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 740880 - 741005
Alignment:
Q  179 attgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaa 278  Q
    ||||||||||| | |||||||||||||| ||||||||  |||||| | |||| ||||| ||||||| ||||||||||||||||| || ||||| ||||||    
T  740880 attgacaaccataattttacaaagaaaattatgtattaacacaaaaaccaaaataatagagagagagaaagtaaaaatataatgtgagtatgagagagaa 740979  T
Q  279 aggtgttacaaaagttgttagaaaat 304  Q
    |  ||| |||||||||||||||||||    
T  740980 aaatgtcacaaaagttgttagaaaat 741005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 137 - 305
Target Start/End: Original strand, 30519509 - 30519675
Alignment:
Q  137 ctagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaata 236  Q
    |||||| | |||||||||||||||||| || |||||||| | || ||||||||  |||||||||||||||  |||||||  ||| || | ||||| ||||    
T  30519509 ctagagcaatgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatgtattaacacgaaaaccaaagcaata 30519608  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
     ||||  ||||||||||||||||||| ||||||||||||||||  | | ||||||||||||| ||||||    
T  30519609 aagag--ataaagtaaaaatataatgagaatatgaaagagaaaattatcacaaaagttgttaaaaaatg 30519675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 308
Target Start/End: Complemental strand, 11947981 - 11947813
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||| |||||| |||||||| |||||  |||||||||||| |||||||| ||||||||||| ||||  |||| || ||||||| || ||||||  ||    
T  11947981 tagagtaatgttatatgaacatctatttgtgtgacaactaaatagacaaccatatttttacaaataaaagcatgtgtttgcacaaaaattaaagta--at 11947884  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||| ||| |||||||| ||||||||  | ||||| |||||||| ||| ||||||||||| | |||||||||    
T  11947883 agaaagagaaagtaaatatataatgtcagtatgagagagaaagttgtcacaaaagttgtcataaaatggtt 11947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 29359921 - 29359809
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||||||| ||||| ||| |||||| |  |||| |  |||||||||     
T  29359921 tgttatttgaacatcaatttgattgacaaccacattgacaaccatatttttataaagaaaagtatgtgttgacacaaaaacaaaagca--atagagagaa 29359824  T
Q  246 aaagtaaaaatataa 260  Q
    |||||||||||||||    
T  29359823 aaagtaaaaatataa 29359809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 29877475 - 29877315
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||  |||||||  | || |||||||| |||||||||||||||| ||||||||| ||| || | ||||  |  |||||||||     
T  29877475 tgttatttgaacatcaattttattgacaatcatatggacaaccatatttttacaaagaaaattatgtattgacacgaaaaccaaa--acaatagagagag 29877378  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||| ||| |||  || ||||| |||||||| ||| | || ||||||||||||||||||    
T  29877377 aaagtaaagatacaatatgagtatgagagagaaagttgtcataagagttgttagaaaatggtt 29877315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 280
Target Start/End: Original strand, 32831061 - 32831193
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||| |||||||||| |||||| ||||||| |||| ||||||||  ||||||||||||||| |||| |||| ||  || |||||||||||||| | ||      
T  32831061 tgttgtttgaacatctatttgcctgacaaccaaatagacaaccatgtttttacaaagaaaagtatggattgacatgaaaatcaaagtaatataaaaag-- 32831158  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||| |||||||||||||  ||||||||||||||||    
T  32831159 aaaataaaaatataatgtaaatatgaaagagaaag 32831193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 50775042 - 50775198
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||| |||||||||||||  | ||||| ||||||| |    ||||||||| | ||||||||||||||| |||| ||| |||||| | ||||| ||||     
T  50775042 tagagttgtgttatttgaacgaccatttgattgacaaattttgtgacaaccataattttacaaagaaaaagatgtgttgacacaaaaaccaaagcaata- 50775140  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
     ||||||||||||||||| |||||| || ||||| |||||||| ||| |||||| ||||    
T  50775141 -gagagataaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaaattgt 50775198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 52437672 - 52437512
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||| || |||||| || |||||||  | || ||||||||  |||||||||| |||| |||||||||  || || ||||||| ||||  || ||||    
T  52437672 tgttatttaaatatcaatgtgattgacaatcacatggacaaccatctttttacaaataaaattatgtattgatacgaaaatcaaagcaata--gaaagat 52437575  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||||| |||||||| ||| |||||| || ||| |||||||||    
T  52437574 aaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattattaaaaaatggtt 52437512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 18434979 - 18434824
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||| ||| ||||   ||||||||    ||||||||| | |||| |||||||||  ||||||||||||||| ||||||  |||| |    
T  18434979 agagttgtgttatttgaaaatctatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattggcacaaaaatcaaaacaataaa 18434880  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||  ||||||||| |||||| |||| ||| |||||||| ||| |||||||||||    
T  18434879 gagaga--aagtaaaaacataatgtgaatgtgagagagaaagttgtcacaaaagttgt 18434824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 26501173 - 26501270
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaata 236  Q
    ||||| ||||||||||||||||||| | | | ||||| ||||||||||||||||||||| |||||||  | |||||||||||| | | ||||||||||    
T  26501173 agagtggtgttatttgaacatcaatgtacgttacaaccaaattgacaaccacatttttagaaagaaatgtgtgtattggcacagaaaccaaagtaata 26501270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 9988062 - 9987981
Alignment:
Q  213 attggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||| ||||||| |||| |||||||  |||||||||||||||| || |||||||||||||| ||| |||||||||||    
T  9988062 attggcacaaaaatcaaagcaatagagagaga--aagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgt 9987981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 148 - 304
Target Start/End: Complemental strand, 1689565 - 1689413
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataa 247  Q
    |||| |||||||  |||||  ||||||||| || |||||||| ||||||| ||| |||| ||||| ||| |||||| |||||||||||    ||| | ||    
T  1689565 ttatatgaacatttatttgtgtgacaactatatagacaaccatatttttataaataaaagtatgtgttgacacaaaaatcaaagtaat----agaaagaa 1689470  T
Q  248 agtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||| |||||||| || ||||| |||||||| ||| |||||| |||||| |||||    
T  1689469 agtaaatatataatgtgagtatgagagagaaagttgtcacaaaaattgttataaaat 1689413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 36750412 - 36750532
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||| |||    ||| | || ||||||||||||||||| ||||| ||||||     
T  36750412 ttgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaaacaaagcaat----agatagaaggtaaaaatataatgcgagtatgagagagaat 36750507  T
Q  280 ggtgttacaaaagttgttagaaaat 304  Q
    | |||| |||||||| |||| ||||    
T  36750508 gttgtttcaaaagttattaggaaat 36750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 5771171 - 5771270
Alignment:
Q  179 attgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaa 278  Q
    ||||||||||| || ||||||||||||| ||||||||   || || | |||||||||||| |||  |||||||||||||||||  |||||||||||||||    
T  5771171 attgacaaccatatctttacaaagaaaattatgtattaaaacgaaaaccaaagtaatatataga--taaagtaaaaatataatatgaatatgaaagagaa 5771268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 29359779 - 29359670
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | ||||||||||||||  ||||| ||||||||| | ||||| |||| |||||    ||||||||| |||||| || ||||| ||||||||    
T  29359779 tgacaaccaaaattttacaaagaaaatgatgtaatggcacaaaaaccaaagcaatagagaga----aagtaaaaagataatgtgagtatgagagagaaag 29359684  T
Q  281 gtgttacaaaagtt 294  Q
     |||||||||||||    
T  29359683 ttgttacaaaagtt 29359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 47820482 - 47820552
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| || ||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  47820482 atagagagataaagtaaaaaaatgatgtgagtatgaaagagaaagttgtaacaaaagttgtcataaaatgg 47820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 49559139 - 49559250
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    |||||||||||||||| ||||| |||| | ||| || |||| ||||  |||||||||| ||||||||  |||  ||||||| |||||||| ||| |||||    
T  49559139 atttttacaaagaaaagtatgtgttggtataaaaattaaagcaata--gagagataaaataaaaata--atgtaaatatgagagagaaagttgtcacaaa 49559234  T
Q  291 agttgttagaaaatgg 306  Q
    ||||||||| ||||||    
T  49559235 agttgttaggaaatgg 49559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 50242452 - 50242374
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatg 262  Q
    |||||||| || ||||||||||||| ||||||||||||| || | |||||||  ||||||||| ||||||||| |||||||    
T  50242452 gacaaccatatatttacaaagaaaagtatgtattggcacgaaaaccaaagta--atagagagagaaagtaaaattataatg 50242374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 649858 - 649786
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||| ||| ||||||||||| | |||||||||    
T  649858 atagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatggtt 649786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 47721539 - 47721439
Alignment:
Q  194 tttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||| || |||||| ||| || ||||||| ||||  ||||||||||||||||| |||||| |||||||| | |||||| ||| |||||||    
T  47721539 tttacaaagaaaaagtaagtattgacacgaaaatcaaagcaata--gagagataaagtaaaaa-ataatgtgaatatgagacagaaagttgtcacaaaag 47721443  T
Q  293 ttgt 296  Q
    ||||    
T  47721442 ttgt 47721439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 47728531 - 47728431
Alignment:
Q  194 tttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||| || |||||| ||| || ||||||| ||||  ||||||||||||||||| |||||| |||||||| | |||||| ||| |||||||    
T  47728531 tttacaaagaaaaagtaagtattgacacgaaaatcaaagcaata--gagagataaagtaaaaa-ataatgtgaatatgagacagaaagttgtcacaaaag 47728435  T
Q  293 ttgt 296  Q
    ||||    
T  47728434 ttgt 47728431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 290
Target Start/End: Complemental strand, 11597824 - 11597672
Alignment:
Q  136 tctagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaat 235  Q
    |||||||  |||||||||||||||| ||||||||||||||| |   |||||||| |  ||||||||||||| ||  |||| |||| || | ||||  |      
T  11597824 tctagaggtgtgttatttgaacatccatttgcttgacaacttatgggacaaccatagatttacaaagaaaagtagatattagcacgaaaaccaaa--aca 11597727  T
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    ||||||||| |||||||||| |||||| || ||||  |||||||| ||| |||||    
T  11597726 atagagagagaaagtaaaaacataatgtgagtatggcagagaaagttgtcacaaa 11597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 48261281 - 48261169
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaagg 281  Q
    ||||| || |||||||||||| |||| | ||||||||||||| | ||||| |  ||||||||| |||||||||| |||||| || ||||||| | || |     
T  48261281 gacaatcatatttttacaaaggaaaagaggtattggcacaaaaaccaaagca--atagagagagaaagtaaaaacataatgtgagtatgaaaaataaggt 48261184  T
Q  282 tgttacaaaagttgt 296  Q
    ||| |||||||||||    
T  48261183 tgtcacaaaagttgt 48261169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 4466835 - 4466724
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggt 282  Q
    ||||||| | |||||||||| ||||   |||||| |||||| ||||||| |||| | |||||  ||||||||| ||||||  ||||||| | |||||| |    
T  4466835 acaaccataattttacaaaggaaaaatggtattgacacaaaaatcaaagcaataaaaagaga--aagtaaaaacataatgtaaatatgagacagaaagtt 4466738  T
Q  283 gttacaaaagttgt 296  Q
    ||||||||||||||    
T  4466737 gttacaaaagttgt 4466724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 4629641 - 4629703
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa 207  Q
    |||||||||||||| | ||| | ||||||||| | ||||||||||||| ||||||||||||||    
T  4629641 gtgttatttgaacaactattagattgacaacttatttgacaaccacatctttacaaagaaaaa 4629703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 27464944 - 27465099
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| || |   ||||||||    ||||||||| | |||||||||| |||  | ||| ||||||||| | ||||| ||||      
T  27464944 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata-- 27465041  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||| |||||||||| || ||| || ||||| |||||||| ||| |||||||||||    
T  27465042 gagagacaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt 27465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 35136974 - 35136864
Alignment:
Q  194 tttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||| | |||||| ||||||| ||||||| ||||  |||||||||||||||||  ||||| || ||||| | |||||| |||| ||||||    
T  35136974 tttacaaagaaaaagtttgtatttgcacaaaaatcaaagcaata--gagagataaagtaaaaa-gtaatgtgagtatgagaaagaaagttgttgcaaaag 35136878  T
Q  293 ttgttagaaaatgg 306  Q
    |||| | |||||||    
T  35136877 ttgtcacaaaatgg 35136864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 44517903 - 44517986
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    ||||||||||||||||||||||| |||||| |||||| ||  ||| ||| | |||||||||| | |||| |||||||| |||||||    
T  44517903 tttacaaagaaaaatatgtattgacacaaaaatcaaaata--ataaagataaaaagtaaaaacaaaatgtgaatatgagagagaaa 44517986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 44789125 - 44789194
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| || ||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  44789125 atagagagataaagtaaaaa-atgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatgg 44789194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 52362571 - 52362502
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  52362571 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgg 52362502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 12306070 - 12306183
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    |||||||||||||||| |||||||||| || || ||||||| |||| | |   | |||||||||||||||||  | |||||||||||||  | | |||||    
T  12306070 atttttacaaagaaaattatgtattggtacgaaaatcaaagaaatagataagaaaaaagtaaaaatataatgtaagtatgaaagagaaaattatcacaaa 12306169  T
Q  291 agttgttagaaaat 304  Q
    | |||||| |||||    
T  12306170 aattgttataaaat 12306183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 23665653 - 23665731
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataa 260  Q
    |||||||||| |||||||||||||||| ||||| ||| |||||| | ||||| |  || |||||| |||||||||||||||    
T  23665653 ttgacaaccatatttttacaaagaaaagtatgtgttgacacaaaaaccaaagca--attgagagagaaagtaaaaatataa 23665731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 291
Target Start/End: Original strand, 33358050 - 33358195
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||| | ||||| ||||||||| |  ||||||||| | ||| ||||||||||| |  ||||| |||| || ||||||  |||   ||||    
T  33358050 agtgttatttgaacaaccatttggttgacaacttatgtgacaaccataattt-acaaagaaaaagtgggtatttgcacgaaaatcaaatcaatt--gaga 33358146  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||| |||||| || ||||| |||||||| ||| ||||||    
T  33358147 gataaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaa 33358195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 8411700 - 8411759
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  8411700 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 8411759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 9008314 - 9008255
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  9008314 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 9008255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 9566942 - 9567014
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| || |||||||||| |||||| || ||||| |||||||| ||| ||||||||||| | |||||||||    
T  9566942 atagagtgagaaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggtt 9567014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 10889938 - 10890097
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||| | ||||| |||||||||    ||||||||| |  |||||||||||||| |  ||||  |||| || ||||||| |  |||||||    
T  10889938 agtgttatttgaacaactatttggttgacaacttttgtgacaaccata-atttacaaagaaaaagttggtatgtgcacgaaaatcaaagca--atagaga 10890034  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||  ||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  10890035 gataaagtaaaaa-gtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgg 10890097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 12798633 - 12798577
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||||| || |||||||||||||  ||| ||| |||||||    
T  12798633 agagataaagtaaaaatataatgtgagtatgaaagagaaaattgtcacataagttgt 12798577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 21340611 - 21340552
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || |||||||||||||| |||| ||||||||||    
T  21340611 atagagagataaagtaaaaag-taatgtgagtatgaaagagaaagttgttgcaaaagttgt 21340552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 21433382 - 21433454
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| ||| |||||| |||||| || ||| | |||||||| ||| ||||||||||||| |||||||||    
T  21433382 atagagagagaaaataaaaacataatgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggtt 21433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 37588657 - 37588716
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| || ||| || |||||||||||||| ||| |||||||||||    
T  37588657 atagagagataaagtaaaaa-attatgtgagtatgaaagagaaagttgtaacaaaagttgt 37588716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 37619684 - 37619575
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggt 282  Q
    ||||||| | |||||||||| |||  | ||||||||||||| ||||| | |  ||||||||| ||| |||||| |||||| || ||||| |||||||| |    
T  37619684 acaaccaaaattttacaaaggaaatgaggtattggcacaaaaatcaacgca--atagagagagaaattaaaaagataatgtgagtatgagagagaaagtt 37619587  T
Q  283 gttacaaaagtt 294  Q
    || |||||||||    
T  37619586 gtcacaaaagtt 37619575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 42812975 - 42812903
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||  ||||||||||||||  | ||||| |||||||| ||| ||||||||| | |||||||||||    
T  42812975 atagagagatagtgtaaaaatataatgtaagtatgagagagaaagttgtaacaaaagttatgagaaaatggtt 42812903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 44723503 - 44723382
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||| || |||||||||||||||  |||||||||| || || | ||||  |||| ||| |  |||||||||||||||| | |||||||| ||||||||    
T  44723503 tgacaatcatatttttacaaagaaatgtatgtattggtacgaaaaccaaaacaataaagaaa--taaagtaaaaatataacgtgaatatgagagagaaag 44723406  T
Q  281 gtgttacaaaagttgttagaaaat 304  Q
     ||| |||||| || ||| |||||    
T  44723405 ttgtcacaaaaattattataaaat 44723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 47214297 - 47214238
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  47214297 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgt 47214238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 48326057 - 48325997
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| ||||||  | ||||| |||||||| |||| ||||||||||    
T  48326057 atagagagataaagtaaaaaaataatgtaagtatgagagagaaagttgttgcaaaagttgt 48325997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 8454665 - 8454716
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||| ||| ||||||||||||| ||||||||||||||||| ||||| ||||    
T  8454665 agagagaaaataaaaatataatgtgaatatgaaagagaaagttgttataaaa 8454716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 296
Target Start/End: Original strand, 33024463 - 33024612
Alignment:
Q  144 agtgttatttgaaca-tcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatg-tattggcacaaatatcaaagtaatatagag 241  Q
    ||||||||||||||| |||||||| | ||||||| | |||||||||| ||||| |||||||||||  || |||||||||  | | || || ||||  |||    
T  33024463 agtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatatttt-acaaagaaaaaagtgatattggcacggaaaccatagcaata--gag 33024558  T
Q  242 agataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||| ||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  33024559 agataaag-aaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 33024612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 38303670 - 38303728
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||| ||||  ||||||||    
T  38303670 atagagagataaagtaaaaa-ataatgcgagtatgagagagaaagttgttgtaaaagttg 38303728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 275
Target Start/End: Original strand, 49065305 - 49065385
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaaga 275  Q
    ||||||||||||||  | ||||||||||||| | ||||| |  ||||||||| |||||||||| |||||| || |||||||||    
T  49065305 ttttacaaagaaaatgaagtattggcacaaaaaccaaagca--atagagagagaaagtaaaaacataatgtgagtatgaaaga 49065385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 4776864 - 4776809
Alignment:
Q  215 tggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaa 272  Q
    ||||||||| ||||||||||||  ||||||||||||||||| |||| | |||||||||    
T  4776864 tggcacaaaaatcaaagtaata--gagagataaagtaaaaagataacgtgaatatgaa 4776809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 9897525 - 9897615
Alignment:
Q  218 cacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| | |||| ||||| | ||||| |||||||||| |||||| || ||| ||||| |||| ||| ||||||||||| | |||||||||    
T  9897525 cacaaaaaccaaaataataaaaagagagaaagtaaaaacataatgtgagtattaaagataaagttgtcacaaaagttgtcaaaaaatggtt 9897615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 13489751 - 13489682
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  13489751 atagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgg 13489682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 29586082 - 29586021
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtta 298  Q
    |||||||||||||||||||| |||||| || ||||| |||||||  |||| ||||||||||||    
T  29586082 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgttgcaaaagttgtta 29586021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 290
Target Start/End: Complemental strand, 32960438 - 32960384
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    ||||| ||| ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  32960438 atagaaagaaaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaa 32960384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 46911382 - 46911313
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| || ||| || ||||||||| |||| ||| ||||||||||| | |||||||    
T  46911382 atagagagataaagtaaaaa-atgatgtgagtatgaaagaaaaagttgtaacaaaagttgtcacaaaatgg 46911313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 51286255 - 51286408
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||| | | ||   |||||||| | |||||||||| | ||| |||||||||||   ||||||||||  | | || || ||||      
T  51286255 agagtagtgttatttgaacaaccaattttgtgacaacttatttgacaaccaaaattt-acaaagaaaaagtagtattggcacggaaaccatagcaata-- 51286351  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||| |||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  51286352 gagagataaaataaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgt 51286408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 296
Target Start/End: Original strand, 17082686 - 17082784
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    ||||||||||  || ||| |||||||||||||||||||||| ||||||| ||  || ||  |||||| |  ||||| |||||||| ||| ||||||||||    
T  17082686 tacaaagaaatttaggtagtggcacaaatatcaaagtaatagagagagaaaa--tagaagaataatgtgtgtatgagagagaaagttgtcacaaaagttg 17082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 33054070 - 33054138
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||  |||||||||| | ||||||    
T  33054070 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaatg 33054138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 41677306 - 41677347
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagaga 277  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  41677306 atagagagataaaataaaaatataatgtgagtatgaaagaga 41677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 46281615 - 46281458
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||||  | |||||||||| |  ||||||||| |||| || || ||||||  || ||||||| ||||  |||||    
T  46281615 gtgttatttgaacaaccatttgatagacaacatatttgacaaccataaatttacaaaggaaaagtaggttttggcatgaaaatcaaagcaata--gagag 46281518  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||||||| || ||| || ||||| |||||||| ||| |||||| || ||| |||||    
T  46281517 ataaagtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaaattattacaaaat 46281458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 48220103 - 48220180
Alignment:
Q  211 gtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||| ||||||| ||||||| ||||  ||||||||||||||||| |||||| || ||||| |||||||| ||| ||||||    
T  48220103 gtatttgcacaaaaatcaaagaaata--gagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaa 48220180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 296
Target Start/End: Original strand, 50328026 - 50328182
Alignment:
Q  137 ctagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatg-tattggcacaaatatcaaagtaat 235  Q
    |||||| ||||||||||||||| | ||||| |||||||||     |||||||| | ||| |||||||||||  || |||| |||| || | ||||| |||    
T  50328026 ctagaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattt-acaaagaaaaagttggtatttgcacgaaaaccaaagcaat 50328124  T
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |  |||||||||||||||||  ||| | || |||||||||||||| |||| ||||||||||    
T  50328125 a--gagagataaagtaaaaag-taacgtgagtatgaaagagaaagttgttgcaaaagttgt 50328182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 756945 - 756886
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| | |||||| |||| ||||||||||    
T  756945 atagagagataaagtaaaaa-ataatgtgagtatgagaaagaaagttgttgcaaaagttgt 756886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 902727 - 902668
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||||| |||||||||    
T  902727 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgttataaaagttgt 902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 4514436 - 4514495
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| |||||||||||||| |||||| |||||||| | |||||| |||| ||||||||||    
T  4514436 atagaaagataaagtaaaaa-ataatgtgaatatgagatagaaagttgttgcaaaagttgt 4514495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 7128207 - 7128148
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||| ||| |||||| |||||||| |||| ||| |||| ||||||||||    
T  7128207 atagagagataaagtagaaa-ataatgtgaatatgagagaggaagttgttgcaaaagttgt 7128148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 279
Target Start/End: Complemental strand, 8846105 - 8846020
Alignment:
Q  192 tttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||||||||| |||||||| |||||| | ||||| |  ||||| ||| |||||||||| || ||| || ||||| |||||||    
T  8846105 tttttacaaagaaaaagatgtattgacacaaaaaccaaagca--atagaaagaaaaagtaaaaacatcatgtgagtatgagagagaaa 8846020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 17652760 - 17652663
Alignment:
Q  192 tttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||| ||||||| ||||  ||| |||||| |||||||||  ||||||| | |||||| |||||||||| || |||||  ||||||| ||||| ||||    
T  17652760 tttttacgaagaaaagtatgcgttgacacaaaaatcaaagta--atagagaaagaaagtataaatataatgtgagtatgagcgagaaagttgttataaaa 17652663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 21486299 - 21486358
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| | |||||| ||||||    
T  21486299 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttattacaatagttgt 21486358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 27533414 - 27533535
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaagg 281  Q
    |||||||| | ||||||||||||||  | |||||| || ||| ||||||  |||| ||||||  |||||||||| |||||  || ||||| ||||||||     
T  27533414 gacaaccaaaattttacaaagaaaatgaggtattgacataaaaatcaaaacaataaagagag--aaagtaaaaacataatatgagtatgatagagaaagt 27533511  T
Q  282 tgttacaaaagttgttagaaaatg 305  Q
    | | ||||||||| ||| ||||||    
T  27533512 tatcacaaaagtttttaaaaaatg 27533535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 30735275 - 30735335
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| ||| |||| ||| |||||||||||    
T  30735275 atagagagagaaagtaaaaaaataatgtgagtatgagagaaaaagttgtcacaaaagttgt 30735335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 32915054 - 32915113
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| |||||||||||    
T  32915054 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgtcacaaaagttgt 32915113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 37685416 - 37685360
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| |||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  37685416 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 37685360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 37700102 - 37700158
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| |||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  37700102 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 37700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 51191877 - 51191818
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||| | ||||| || ||||| ||| |||| |||||||||||||||    
T  51191877 atagagagataaagtaaaa-tgtaatgtgagtatgagagaaaaagttgttacaaaagttgt 51191818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 140 - 308
Target Start/End: Original strand, 25830133 - 25830299
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  25830133 gagtagtgttatttgaacatcaatttgtttaacaactaaatggacaaccacatttttacaaagaaaagtatgtattggcacaaatatcaaagta--atag 25830230  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| ||||||||||||||||| || ||||| |||||||| ||| |||||||||||||||||||||||    
T  25830231 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggtt 25830299  T

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Target: chr8; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 136 - 308
Target Start/End: Complemental strand, 43716062 - 43715893
Alignment:
Q  136 tctagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaat 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||      
T  43716062 tctagagtagtgttatttgaacatcaatttgcttgacaactaaatggacaaccacatttttaccaagaaaagtatgtattggtacaaatatcaaagta-- 43715965  T
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| ||||||||||||||||| || ||||| |||||||| ||| ||||||||| |||||||||||||    
T  43715964 atagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagtt-ttagaaaatggtt 43715893  T

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Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 138 - 308
Target Start/End: Original strand, 67046 - 67214
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||  ||    
T  67046 tagagtagtgttatttgaacattaatttgcttgacaaccaaatagacaaccacatttttacaaagaaaatcatgtattggcacaaatatcaaagta--at 67143  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||  |||||||||||||||| |  ||||| |||||||| ||| |||||||||||||||||||||||    
T  67144 agagagaagaagtaaaaatataatgtgggtatgagagagaaagttgtcacaaaagttgttagaaaatggtt 67214  T

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Target: chr8; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 33539590 - 33539424
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||    
T  33539590 agagtagtgttatttgaacatcaatttgcttgacaactaaatggacaaccacattttttcaaagaaaagtatgtattggcacaaatatcaaagta--ata 33539493  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||  |||||||||||||||| || ||||| || ||||  ||| ||||||||||||| |||||||||    
T  33539492 gagagagtaagtaaaaatataatgtgagtatgagag-gaaaattgtcacaaaagttgttaaaaaatggtt 33539424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 138 - 308
Target Start/End: Complemental strand, 12656108 - 12655940
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||||||  ||||||||||||||| |||| ||||||||||| || ||||||  ||    
T  12656108 tagagtagtgttatttgaacatctatttgcttgacaaccaaatagacaaccatgtttttacaaagaaaagtatgcattggcacaaaaatgaaagta--at 12656011  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||| ||||||||||||||||  |||||||| ||| |||| | ||||||||||| ||| |||||||||    
T  12656010 agagagagaaagtaaaaatataatatgaatatgagagaaaaagttattacaaaagttattataaaatggtt 12655940  T

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Target: chr8; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 35067338 - 35067178
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||| ||||| |||||||||| | ||||| |  |||||||||     
T  35067338 tgttatttgaacatcaatttggttgacaaccacattgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaaccaaagca--atagagagag 35067241  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||||| |||||||| ||| |||||||||||||  ||||||||    
T  35067240 aaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggtt 35067178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 42786551 - 42786713
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||| ||| |||||||| |||||||||| ||   ||||||||||||||||||||||||||||||| ||||||| || | |||||||     
T  42786551 tgttatttgaacatcaacttggttgacaaccaaattgacaatcatgattttacaaagaaaaatatgtattggcacaaaaatcaaagaaagagagagagaa 42786650  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||| | |||||||| ||| |||||| |||| |||||||||||    
T  42786651 aaagtaaaaatataatgtgagtataagagagaaagttgtcacaaaaattgtaagaaaatggtt 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 296
Target Start/End: Complemental strand, 6440259 - 6440111
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||| ||||||| || | ||||||      
T  6440259 tgttatttgaacatcaacttggttgacaaccaaattgacaaccatatttttacaaagaaaagtatgtattgacacaaaaatcaaagcaagaaagagag-- 6440162  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||| || ||||| |||||||| ||| |||||||||||    
T  6440161 aaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgt 6440111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 35792224 - 35792118
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||||||||||||||||||||||||||     
T  35792224 tagaggagtgttatttgaacaccaatttgcttgacaactaaatggacaaccacatttttatcaaaaaaagtatgtattggcacaaatatcaaagtaatag 35792125  T
Q  238 agagaga 244  Q
    |||||||    
T  35792124 agagaga 35792118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 306
Target Start/End: Original strand, 8671444 - 8671607
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatataga 240  Q
    |||| ||||||||||||||| ||||| || ||||  |||| |||| ||| ||||||||||| ||||| || |||||  ||||| ||||||||||||  ||    
T  8671444 agtaatgttatttgaacatccatttgtttaacaatcaaatggacagccatatttttacaaaaaaaaaaatatattgatacaaaaatcaaagtaata--ga 8671541  T
Q  241 gagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||||||| ||||| |||||||| | ||||||||||| ||| |||||||    
T  8671542 gagataaagtaaaaatataatgcgagtatgagagagaaagttattacaaaagttattataaaatgg 8671607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 149 - 308
Target Start/End: Original strand, 33100367 - 33100522
Alignment:
Q  149 tatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaa 248  Q
    |||||||||||| ||||| |||||||| |||| |||||||  |||||||||||||||| ||||||||| |||||| |||||||||||    ||||| |||    
T  33100367 tatttgaacatccatttgtttgacaaccaaatagacaaccttatttttacaaagaaaagtatgtattgacacaaaaatcaaagtaat----agagagaaa 33100462  T
Q  249 gtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
     ||||||| ||||| || ||||| |||||||| ||| ||||||||||||| |||||||||    
T  33100463 ataaaaatgtaatgtgagtatgagagagaaagttgtcacaaaagttgttataaaatggtt 33100522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 41639691 - 41639816
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| |  |||||||||| |||||||||||||||| ||||| ||| |||||| ||||||| |||| |||||||     
T  41639691 tgttatttgaacatcaatttggttgacaaccacgttgacaaccatatttttacaaagaaaagtatgtgttgacacaaaaatcaaagcaatagagagagag 41639790  T
Q  246 aaagtaaaaatataatgcgaatatga 271  Q
    ||||||||||||||||| || |||||    
T  41639791 aaagtaaaaatataatgtgagtatga 41639816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 3270766 - 3270929
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||||| | ||||| ||| |||| |||| ||||||||||| ||||||| |        
T  3270766 tagagtaatgttatttgaacatcaacttggttgacaactaaattgacaaccataattttataaacaaaagtatggattggcacaaaaatcaaagca---- 3270861  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||| |||  |||||||||||| |||||| | |||||||| ||| ||||||||||| || |||||    
T  3270862 agagagagaaaacaaaaatataatgtgaatattagagagaaagttgtcacaaaagttgtaaggaaatg 3270929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 141 - 308
Target Start/End: Original strand, 7814476 - 7814645
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaa-------ctaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagta 233  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||  |||||||||| |||| |||| || |||||||||||||    
T  7814476 agtagtgttatttgaacatcaatttgcttgacaaatgacaactaaattgacaaccacattt--acaaagaaaagtatgcattgacataaatatcaaagta 7814573  T
Q  234 atatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
      ||||||||| ||||||||||||||||  || ||| | |||||||| ||| |||||| |||||| |||||||||    
T  7814574 --atagagagagaaagtaaaaatataatatgagtataagagagaaagttgtcacaaaa-ttgttaaaaaatggtt 7814645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 45405709 - 45405549
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||||| || |||||||| | || |||||| | ||||||||||||||||  || ||||| ||| || ||||||| |||| |||||||     
T  45405709 tgttatttgaacatcaatgtgattgacaaccacatggacaactatatttttacaaagaaaatcatatattgacacgaaaatcaaagcaatagagagaga- 45405611  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
     |||||||||||||||| |||||||||||| |||| ||| |||||| || ||| |||||||||    
T  45405610 -aagtaaaaatataatgtgaatatgaaagaaaaagttgtcacaaaaattattaaaaaatggtt 45405549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 304
Target Start/End: Original strand, 7777098 - 7777229
Alignment:
Q  169 tgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaata 268  Q
    ||||||||||||||||||||||||||  |||||||||| |||| |||  ||||||||||||||||||| |||||||  |||||||||||||||| || ||    
T  7777098 tgacaactaaattgacaaccacattt--acaaagaaaagtatgcattaacacaaatatcaaagtaatagagagaga--aagtaaaaatataatgtgagta 7777193  T
Q  269 tgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    | | |||||||| ||| |||||| |||||| |||||    
T  7777194 taagagagaaagttgtcacaaaaattgttaaaaaat 7777229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 5574433 - 5574320
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||||| ||||||||  |||||| |||||| ||  ||||||| |     
T  5574433 tgttatttgaacatcaatttggttgacaactatattgacacccatatttttacaaagaaaagtatgtattaacacaaaaatcaaaata--atagagaaag 5574336  T
Q  246 aaagtaaaaatataat 261  Q
    ||||||||||||||||    
T  5574335 aaagtaaaaatataat 5574320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 304
Target Start/End: Original strand, 7795188 - 7795354
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaa-------ctaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagta 233  Q
    ||||||||||| ||||||||||||||||||||||       ||||||||||||| ||||||  |||||||||| |||| |||| ||||||||||||||||    
T  7795188 agtagtgttatatgaacatcaatttgcttgacaaatgacaactaaattgacaactacattt--acaaagaaaagtatgcattgacacaaatatcaaagta 7795285  T
Q  234 atatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
      ||||| ||| |||||||||||||||||  | ||| | |||||||  ||| ||||||||||||| |||||    
T  7795286 --atagaaagagaaagtaaaaatataatgtaagtataagagagaaaattgtcacaaaagttgttaaaaaat 7795354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 43285890 - 43286016
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||| | ||||||| ||||||||||||||||||  | ||| | ||||| |||| |||||||  |||||||||||||||| || ||||| |||||||    
T  43285890 ttgacaactatatttttagaaagaaaaatatgtattgatataaaaaccaaagcaataaagagaga--aagtaaaaatataatgtgagtatgagagagaaa 43285987  T
Q  280 ggtgttacaaaagttgttagaaaatggtt 308  Q
    | ||| ||||||||| |||||||||||||    
T  43285988 gttgtcacaaaagttattagaaaatggtt 43286016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 277
Target Start/End: Original strand, 3413086 - 3413215
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| | |||||||  || ||||||||||||||||  ||||||||||||||| | ||||| |  ||||| | |     
T  3413086 tgttatttgaacatcaatttggttgacaacaacattgacagtcatatttttacaaagaaaatcatgtattggcacaaaaaccaaagca--atagaaaaag 3413183  T
Q  246 aaagtaaaaatataatgcgaatatgaaagaga 277  Q
    ||||||||||||||||| || ||||| |||||    
T  3413184 aaagtaaaaatataatgtgagtatgagagaga 3413215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 42619907 - 42620028
Alignment:
Q  179 attgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaa 278  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||| ||||||| |||| ||||      |||||||||||||   |||||||| ||||||    
T  42619907 attgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaatcaaagcaatagagag------agtaaaaatataacttgaatatgagagagaa 42620000  T
Q  279 aggtgttacaaaagttgttagaaaatgg 306  Q
    |  ||| |||||||||||||||||||||    
T  42620001 atttgtcacaaaagttgttagaaaatgg 42620028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 39453210 - 39453294
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaa 230  Q
    ||||||||||||||||||||| |||||||| | |||||||| || |||||||||||||||| ||||||||| || ||| ||||||    
T  39453210 tgttatttgaacatcaatttgattgacaaccacattgacaatcatatttttacaaagaaaattatgtattgacagaaaaatcaaa 39453294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 10644694 - 10644855
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||||| | |||||||||| |  ||||||||| |||| || || ||||||| || || |||| ||||  |||||    
T  10644694 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaattaaagcaata--gagag 10644791  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||| ||| || || ||||| |||||||| ||| ||||||||||||| |||||||||    
T  10644792 ataaagtaaaaacata-tgtgattatgagagagaaagttgtcacaaaagttgttacaaaatggtt 10644855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 38675787 - 38675649
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||| |||||||||||||||| ||||  |||| ||  |||| |||||||| |  |||| |||||||| |||||||||||||||| | |||||  | ||||    
T  38675787 gagttgtgttatttgaacatctatttatttgataatcaaatagacaaccataactttaaaaagaaaagtatgtattggcacaaaaaccaaag--aaatag 38675690  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||| ||||||||||||||||| |  ||||| ||||||||    
T  38675689 agagagaaagtaaaaatataatgtgggtatgagagagaaag 38675649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 6972298 - 6972183
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||| |||| ||||||| ||    |||||||||||  ||||||| | |||||    
T  6972298 ttgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaaccaaagcaatagagagagaaaa---taaaatataatgtaaatatgagatagaaa 6972202  T
Q  280 ggtgttacaaaagttgtta 298  Q
    | ||| |||||||||||||    
T  6972201 gttgtcacaaaagttgtta 6972183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 10902835 - 10902739
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||||  ||||||||||||||| ||||||| |  ||||||||| |||||||||| |||||| || | ||| |||||||| ||||||||||    
T  10902835 ttttacaaagaaaatgatgtattggcacaaaaatcaaagca--atagagagagaaagtaaaaacataatgtgagtgtgagagagaaagttgttacaaaa 10902739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 32752487 - 32752422
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaa 303  Q
    ||||||||||||||||||||||||| || |||||||||||||  ||| ||||||||||||| ||||    
T  32752487 agagagataaagtaaaaatataatgagagtatgaaagagaaaattgtcacaaaagttgttaaaaaa 32752422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 36969560 - 36969637
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtatt 215  Q
    |||||| |||||||||||||||| ||||| ||||||||| |   |||||||| ||||||||||||||| |||||||||    
T  36969560 tagagttgtgttatttgaacatccatttgtttgacaacttatgcgacaaccatatttttacaaagaaatatatgtatt 36969637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 12339046 - 12339113
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaat 208  Q
    |||||||||||||||| ||||||||||  ||||||||||||  ||||||| ||||||||||||||||||    
T  12339046 gagtagtgttatttga-catcaatttgtgtgacaactaaatgaacaaccatatttttacaaagaaaaat 12339113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 23754688 - 23754760
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||| |||||||||||||||||||||  || |||||||||||||| ||| ||||||||| ||| |||||||||    
T  23754688 atagtgagataaagtaaaaatataatatgagtatgaaagagaaagttgtcacaaaagttattaaaaaatggtt 23754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 21526210 - 21526334
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaagg 281  Q
    |||||||| | ||| ||||||||||| | |||||||||||||   ||||| || | |||||||  ||||||||| |||||| || ||||| |||||||      
T  21526210 gacaaccataatttcacaaagaaaaagaggtattggcacaaaatccaaagcaacaaagagaga--aagtaaaaacataatgtgagtatgagagagaaaac 21526307  T
Q  282 tgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| ||| |||||    
T  21526308 tgttacaaaagttgttaaaaagtggtt 21526334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 2730945 - 2731002
Alignment:
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||| |||||||||| |||||| |||||||| |||||||| |||||||||||||||    
T  2730945 gagagagaaagtaaaaagataatgtgaatatgagagagaaagttgttacaaaagttgt 2731002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 12734953 - 12735063
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagt 293  Q
    ||||||| ||||| || |||||| |||||| |||||||||||||  |||||||| ||||||| |||||  || ||||| |||||||  ||| ||||||||    
T  12734953 tttacaatgaaaagtaggtattgacacaaaaatcaaagtaatat--agagataaggtaaaaacataatatgagtatgagagagaaaattgtcacaaaagt 12735050  T
Q  294 tgttagaaaatgg 306  Q
    ||| | |||||||    
T  12735051 tgtcataaaatgg 12735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 10731676 - 10731575
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||| |||  | |||||| |||||| ||||||| |||| |||||||  ||||||||| |||||  || ||| |||||||||| |||||||||||    
T  10731676 ttttacaaaggaaatgaagtattgacacaaaaatcaaagcaatagagagaga--aagtaaaaagataatatgagtataaaagagaaagttgttacaaaag 10731579  T
Q  293 ttgt 296  Q
    ||||    
T  10731578 ttgt 10731575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 43397923 - 43397810
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | ||||||||||||||  |  || ||||||||| | |||||||||| | |||||  ||||||||| |||||| || ||||| ||||||||    
T  43397923 tgacaaccaaaattttacaaagaaaatgagatagtggcacaaaaaccaaagtaatagaaagaga--aagtaaaaaaataatgtgagtatgagagagaaag 43397826  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  43397825 ttgtaacaaaagttgt 43397810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 29991501 - 29991432
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| || ||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  29991501 atagagagataaagtaaaaa-atgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatgg 29991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 34718204 - 34718135
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  34718204 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtaacaaaagttgtcacaaaatgg 34718135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 304
Target Start/End: Original strand, 36611973 - 36612128
Alignment:
Q  147 gttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagata 246  Q
    ||||| ||||||||  ||||  ||| ||| |||| |||||||| ||||||  ||| |||| ||||| |||||||||| |||||||||||| | ||||  |    
T  36611973 gttatatgaacatctgtttgtgtgaaaaccaaatagacaaccatatttttttaaataaaagtatgtgttggcacaaaaatcaaagtaataaaaagag--a 36612070  T
Q  247 aagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    ||||||| |||||| |  | |||||  ||||||| ||| |||||| |||||| |||||    
T  36612071 aagtaaatatataaggtaagtatgagggagaaagttgtcacaaaaattgttataaaat 36612128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 291
Target Start/End: Original strand, 30439398 - 30439542
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||| | ||||| |||| |||| |  ||||||||| | ||| ||||||||||| |  ||||| |||| || ||||||| ||||  ||||    
T  30439398 agtgttatttgaacaaccatttggttgataacttatgtgacaaccataattt-acaaagaaaaaatgagtatttgcacgaaaatcaaagcaata--gaga 30439494  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||| |||||| || ||||| |||||||| ||| ||||||    
T  30439495 gataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaa 30439542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 1633872 - 1633931
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  1633872 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 1633931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 11017894 - 11017835
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  11017894 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 11017835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 32501125 - 32501238
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | |||||||||| |||  | ||| || |||||| |||||||||  ||||||||| || ||||||| |||||| || ||||| |||||||     
T  32501125 tgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagta--atagagagagaacgtaaaaaaataatgtgagtatgagagagaaaa 32501222  T
Q  281 gtgttacaaaagttgt 296  Q
     ||||| |||||||||    
T  32501223 ttgttaaaaaagttgt 32501238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 33279530 - 33279602
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| |||||||||||||||||  | ||||| ||| |||| ||| |||||||||||||  ||||||||    
T  33279530 atagagagagaaagtaaaaatataatgtaagtatgagagataaagttgtcacaaaagttgttaagaaatggtt 33279602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 37942888 - 37942948
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||||||||||  ||||||||||| |||| ||| |||||| ||||    
T  37942888 atagagagagaaagtaaaaatataatgtaaatatgaaagaaaaagttgtcacaaaaattgt 37942948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 41159871 - 41159930
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  41159871 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgt 41159930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 45529228 - 45529287
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||||||||| ||||    
T  45529228 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttacaaaaattgt 45529287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 9549181 - 9549250
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| |||||| || ||||| |||||||  ||| ||||||||||| | |||||||    
T  9549181 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaatgg 9549250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 16872138 - 16872207
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| |||| |||||||||| | |||||||    
T  16872138 atagagagataaagtaaaaa-gtaatgtgagtatgatagagaaagttgttgcaaaagttgtcacaaaatgg 16872207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 39856164 - 39856086
Alignment:
Q  197 acaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaaga 275  Q
    |||||||||||||  ||||| |||||| ||||||| |||| ||||||| |||  | | ||||||||||| |||||||||    
T  39856164 acaaagaaaaatagatattgacacaaaaatcaaagcaatagagagagaaaaaaaatatatataatgcgagtatgaaaga 39856086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 25987730 - 25987840
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    ||||||||||  || ||| || |||||| ||||||| ||||  ||||||||||||| ||  |||||| || ||||| ||| |||| ||| ||||||||||    
T  25987730 tacaaagaaatttaggtagtgacacaaaaatcaaagcaata--gagagataaagtagaatgataatgtgagtatgagagataaagttgtcacaaaagttg 25987827  T
Q  296 ttagaaaatggtt 308  Q
    | | |||||||||    
T  25987828 taaaaaaatggtt 25987840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 7592938 - 7592879
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| ||| |||| |||| ||||||||||    
T  7592938 atagagagataaagtaaaaa-ataatgtgactatgagagataaagttgttgcaaaagttgt 7592879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 7955989 - 7956048
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| |||| ||||||||||    
T  7955989 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgttgcaaaagttgt 7956048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 10839423 - 10839535
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||| ||  |||||||||||| | ||||| |  ||||| ||| |||||||||| ||||||  | ||||| |||| ||| ||| |||||||    
T  10839423 ttttacaaagaaaattaaatattggcacaaaaaccaaagca--atagatagagaaagtaaaaacataatgtaagtatgagagag-aagttgtcacaaaag 10839519  T
Q  293 ttgttagaaaatggtt 308  Q
    |||||| ||| |||||    
T  10839520 ttgttaaaaattggtt 10839535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 16966874 - 16966815
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||| ||| |||||| || ||||| |||||||| |||| ||||||||||    
T  16966874 atagagagataaagtagaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 16966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 24798339 - 24798399
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| ||| ||||||||||||||||| || ||||| |||||||| ||||| |||| ||||    
T  24798339 atagaaagagaaagtaaaaatataatgtgagtatgagagagaaagttgttaaaaaaattgt 24798399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 27325847 - 27325787
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| || ||| || ||||| |||||||| ||| |||||||||||    
T  27325847 atagagagagaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt 27325787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 30136001 - 30136056
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||| |||| ||||||||||    
T  30136001 agagataaagtaaaaa-gtaatgtgaatatgagagagaaagttgttgcaaaagttgt 30136056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 32847668 - 32847728
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||| |||||||||||| |||||| || ||| | |||||||| |||| ||||||||||    
T  32847668 atagagaaataaagtaaaaaaataatgtgagtataagagagaaagttgttgcaaaagttgt 32847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 34018897 - 34018826
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| |||||||||||||  ||||| || ||||| |||||||  |||| |||||||||| |||||||||||    
T  34018897 atagagtgataaagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaagttgtcagaaaatggtt 34018826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 34186696 - 34186636
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| ||| |||||| |||||| || ||| |||||||||| ||| |||||||||||    
T  34186696 atagagagagaaaataaaaagataatgtgagtataaaagagaaagttgtcacaaaagttgt 34186636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 294
Target Start/End: Original strand, 37133749 - 37133902
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| ||||||||| |||||| ||||   ||||||||    ||||||||| | ||||||||||||||  || ||||| |||||| ||||||| |  |||    
T  37133749 agagttgtgttattttaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagca--ata 37133846  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    || ||| |||||||||| |||||  || | ||| ||| |||| ||| |||||||||    
T  37133847 gaaagagaaagtaaaaacataatatgagtgtgagagaaaaagttgtcacaaaagtt 37133902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 40739894 - 40739953
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| |||||||| ||| |||  |||| ||||||||||    
T  40739894 atagagagataaagtaaaaa-ataatgtgaatatgagagaaaaaattgttgcaaaagttgt 40739953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 140 - 308
Target Start/End: Complemental strand, 22098439 - 22098273
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  22098439 gagtagtgttatttgaacatcaatttgcttgataattaaatggacaaccacatttttacaaagaaaagtatgtattggcacaaatatcaaagta--atag 22098342  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| ||||||||||||||||| || ||||| |||||||| ||| |||||||||||||||||||||||    
T  22098341 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggtt 22098273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 308
Target Start/End: Complemental strand, 16690686 - 16690517
Alignment:
Q  137 ctagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaata 236  Q
    |||||| | ||||||||||| ||||||||| |||||||| | ||||||||||| |||||||||||||||| ||||| |||||||||| | ||||| |  |    
T  16690686 ctagagcaatgttatttgaatatcaatttggttgacaaccacattgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaaccaaagca--a 16690589  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| | ||||||||||||||||| || |||||||||||||| ||| |||||||||||||  ||||||||    
T  16690588 tagagaaagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgttaagaaatggtt 16690517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 308
Target Start/End: Original strand, 38293245 - 38293412
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaa--atatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||  ||||  ||||||||||| |||||||||  ||    
T  38293245 gagtagtgttatttgaacatctatttgcttgacaaccaaatagacaatcatgtttttacaaagaaaagtatatacattggcacaaa-atcaaagta--at 38293341  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||| || |||||||||||||| || ||||| |||||||| ||| |||||| |||||| |||||||||    
T  38293342 agagagagaaggtaaaaatataatgtgagtatgatagagaaagttgtcacaaaaattgttataaaatggtt 38293412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 146 - 302
Target Start/End: Complemental strand, 38493803 - 38493648
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcac-aaatatcaaagtaatatagagaga 244  Q
    ||||||||||||||||||||| |||||||| | ||||||| ||| ||||| |||||||||| ||||| ||||||| ||| ||||||| |  |||||||||    
T  38493803 tgttatttgaacatcaatttggttgacaaccacattgacacccatattttaacaaagaaaagtatgtgttggcacaaaaaatcaaagca--atagagaga 38493706  T
Q  245 taaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaa 302  Q
    |||||||||| ||||||| || ||||| |||||||| | | ||||||||| |||||||    
T  38493705 taaagtaaaattataatgtgagtatgagagagaaagttatcacaaaagttattagaaa 38493648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 9168061 - 9168218
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| | |||||||| || ||||| |||||||||| ||||| |||||||||| | ||||| |||| |||||       
T  9168061 tgttatttgaacatcaatttggttgacaaccatattgacaatcatatttt-acaaagaaaagtatgtgttggcacaaaaaccaaagcaatagagaga--- 9168156  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
     || ||||||||||||| || |||||||||||||  ||| |||||||||||||| ||||||||    
T  9168157 -aaataaaaatataatgtgagtatgaaagagaaaattgtcacaaaagttgttaggaaatggtt 9168218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 304
Target Start/End: Complemental strand, 40364749 - 40364590
Alignment:
Q  143 tagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagaga 242  Q
    |||||||||||||||||| |||||||||||||  |||| || |||||  |||||| |||||||| |||  || |||||||| |||||||||  |||||||    
T  40364749 tagtgttatttgaacatctatttgcttgacaatcaaatagataaccatgtttttagaaagaaaagtatacatcggcacaaaaatcaaagta--atagaga 40364652  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    || |||||| |||||||||| || ||||| |||||||| ||| | ||||||||||| |||||    
T  40364651 gagaaagtagaaatataatgtgagtatgagagagaaagttgtcataaaagttgttataaaat 40364590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 306
Target Start/End: Complemental strand, 4088628 - 4088463
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| ||||  ||||||||  |  |||||| || |||||||||||||||  |||||||| |||| || | ||||| |||| |    
T  4088628 agagttgtgttatttgaacatctatttttttgacaacctatgtgacaatcatatttttacaaagaaatgtatgtattagcacgaaaaccaaagcaataga 4088529  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    || |||  |||||||||||||||| || |||||||||||||| ||| ||||||||||||| |||||||    
T  4088528 gaaaga--aagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgttataaaatgg 4088463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 296
Target Start/End: Complemental strand, 32639226 - 32639072
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatataga 240  Q
    |||||||||||||||||||| |||||| ||||||  |||| ||||| |  |||||||||||||||| |||||||| |||| || ||||||||||||||||    
T  32639226 agtagtgttatttgaacatctatttgcatgacaatcaaatagacaatcttatttttacaaagaaaagtatgtattagcacgaaaatcaaagtaatataga 32639127  T
Q  241 gagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    || | |||  ||||||| |||  |||||||| |||||||| ||| |||||| ||||    
T  32639126 ga-aaaaataaaaaataaaatatgaatatgagagagaaagttgtcacaaaatttgt 32639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 308
Target Start/End: Complemental strand, 40829598 - 40829432
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||| |||||||||||||| | ||||  ||||||| ||||||||||| | ||||| | |||||||| |||||||| |||| || || ||||||  ||||    
T  40829598 gagtaatgttatttgaacattactttgtgtgacaaccaaattgacaactaaattttcataaagaaaagtatgtattagcacgaaaattaaagta--atag 40829501  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||||||||| || ||||| ||| |||  ||| |||||| || ||| |||||||||    
T  40829500 agagataaagtaaaaatataatgtgagtatgagagaaaaaattgtcacaaaaattattaaaaaatggtt 40829432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 308
Target Start/End: Original strand, 14321850 - 14322008
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataa 247  Q
    ||||||||||||||||||  |||||||| | || |||||||| | |||||||||||||| |||||||||  |  || | ||||| |  ||||||||| ||    
T  14321850 ttatttgaacatcaatttaattgacaaccatatggacaaccatacttttacaaagaaaattatgtattgatatgaaaaccaaagca--atagagagagaa 14321947  T
Q  248 agtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    | |||| ||| |||  |||||||| |||||||| ||| |||||||||||||||||||||||    
T  14321948 aataaatatacaatatgaatatgagagagaaagttgtcacaaaagttgttagaaaatggtt 14322008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 6758683 - 6758844
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacattttta-caaagaaaaatatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    |||||||||||||||||| || |||||||| | || ||||||||  |||||  |||||||||  |||||||| ||| || | ||||| ||||  ||||||    
T  6758683 tgttatttgaacatcaatatgattgacaaccacatggacaaccatttttttttcaaagaaaatcatgtattgacacgaaaaccaaagcaata--gagaga 6758780  T
Q  245 taaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||| ||||||||||||| || ||| | |||||||| ||| |||||| ||||||||||||||||    
T  6758781 taaaataaaaatataatgtgagtataagagagaaagttgtcacaaaaattgttagaaaatggtt 6758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 291
Target Start/End: Complemental strand, 884619 - 884476
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||  |||||||  | ||| ||||||| |||||||||| ||||| ||||| |||||||||| ||||||  |  ||||| |||     
T  884619 tgttatttgaacatcaatttagttgacaatcatattaacaaccatatttttacaatgaaaagtatgtgttggcacaaaaatcaaa--acaatagaaagag 884522  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||||||| || ||||| ||| |||| ||| ||||||    
T  884521 aaagtaaaaatataatgtgagtatgagagataaagttgtcacaaaa 884476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 26687047 - 26686903
Alignment:
Q  155 aacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaa 254  Q
    ||||| |||||| |||||||||| ||||||||||| |||||||||||||||| ||| | |||  ||||| ||||||  |||    ||||| |||||||||    
T  26687047 aacattaatttgattgacaactacattgacaaccatatttttacaaagaaaagtat-tgttgatacaaaaatcaaaacaat----agagagaaagtaaaa 26686953  T
Q  255 atataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||| |||||||| |||||||| ||| |||||| || ||| |||||    
T  26686952 atataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaat 26686903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 26956778 - 26956634
Alignment:
Q  155 aacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaa 254  Q
    ||||| |||||| |||||||||| ||||||||||| |||||||||||||||| ||| | |||  ||||| ||||||  |||    ||||| |||||||||    
T  26956778 aacattaatttgattgacaactacattgacaaccatatttttacaaagaaaagtat-tgttgatacaaaaatcaaaacaat----agagagaaagtaaaa 26956684  T
Q  255 atataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||| |||||||| |||||||| ||| |||||| || ||| |||||    
T  26956683 atataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaat 26956634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 27947368 - 27947316
Alignment:
Q  8 tgagatgaaatgataatgcaaagacgagaatttcaaaaacaaacggcatgtat 60  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27947368 tgagatgaaatgataatgcgaagacgagaatttcaaaaacaaacggcatgtat 27947316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 308
Target Start/End: Complemental strand, 18695497 - 18695336
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||||| | |||||||||| |  ||||||||| |||| || || || |||| || ||||||| ||||  |||||    
T  18695497 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttagcacgaaaatcaaagcaata--gagag 18695400  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||| ||| || || ||||| |||||||| ||| ||||||||||||| |||||||||    
T  18695399 ataaagtaaaaacata-tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggtt 18695336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 7287171 - 7287243
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| ||||||||||||||||| || |||||||||||||| ||| ||||||||||| | |||||||||    
T  7287171 atagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaaatggtt 7287243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 6940042 - 6940203
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaa-gaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||||| | |||||||||| |  |||||||| ||||| || || ||||||| || ||||||| |  ||||||||    
T  6940042 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagca--atagagag 6940139  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||| || ||| || ||||| |||||||| ||| |||||| || ||| |||||||||    
T  6940140 ataaagtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaaattattataaaatggtt 6940203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 21156118 - 21156005
Alignment:
Q  193 ttttacaaagaaaaatatgt-attggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    |||||||||||||| || || ||||||||||| | ||||| |||| | |||||  |||| ||||||||||| || |||||||||||||||||| ||||||    
T  21156118 ttttacaaagaaaa-taagtgattggcacaaaaaccaaagcaatagaaagaga--aagtgaaaatataatgtgagtatgaaagagaaaggtgtcacaaaa 21156022  T
Q  292 gttgttagaaaatggtt 308  Q
    ||||| | |||||||||    
T  21156021 gttgtcaaaaaatggtt 21156005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 294
Target Start/End: Original strand, 41175593 - 41175745
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatat 237  Q
    |||| ||||||||||||||| | ||||| ||||||||| |  ||||||||| |  |||||||||||||| |  ||||| |||| || ||||||| |  ||    
T  41175593 agaggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccata-atttacaaagaaaaagtgggtatttgcacgaagatcaaagca--at 41175689  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    |||||||||||||||||| |||||| || ||||| |||||||| ||| |||||||||    
T  41175690 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagtt 41175745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 9939324 - 9939484
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||| | | |||||||||| |  ||||||||| |||| || || ||||||| || ||||||| ||||  |||||    
T  9939324 gtgttatttgaacaaccatttgatagacaatttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaata--gagag 9939421  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggt 307  Q
    |||||||||||| || ||| |||||||| |||||||  ||| |||||| |||||| ||||||||    
T  9939422 ataaagtaaaaacat-atgtgaatatgagagagaaaattgtcacaaaacttgttacaaaatggt 9939484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 306
Target Start/End: Complemental strand, 10649619 - 10649455
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatg-tattggcacaaatatcaaagtaatat 237  Q
    |||| ||||||||||||||| | ||||| |||||||||    ||||||||| | ||| |||||||||||  || |||  |||| || ||||||| ||||     
T  10649619 agaggagtgttatttgaacaaccatttggttgacaacttttgtgacaaccataattt-acaaagaaaaagttggtatgtgcacgaaaatcaaagcaata- 10649522  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
     |||||||||||||||||  ||||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  10649521 -gagagataaagtaaaaag-taatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatgg 10649455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 13089725 - 13089835
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    ||||||||||  || ||| || |||||| ||||||| ||||  ||||||||||||| ||  |||||| || |||||||||||||| ||| ||||||||||    
T  13089725 tacaaagaaatttaggtagtgacacaaaaatcaaagcaata--gagagataaagtagaatgataatgtgagtatgaaagagaaagttgtcacaaaagttg 13089822  T
Q  296 ttagaaaatggtt 308  Q
    | | |||||||||    
T  13089823 tcaaaaaatggtt 13089835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 27546193 - 27546084
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    ||||||||||||||  ||||| || ||| ||||||| || ||||||| ||||||||||||||||||| || ||||| | | |||| ||| |||||| |||    
T  27546193 tacaaagaaaaatagatattgacataaaaatcaaagcaaaatagagatataaagtaaaaatataatgtgagtatgagaaataaagttgtcacaaaatttg 27546094  T
Q  296 ttagaaaatg 305  Q
    | | ||||||    
T  27546093 tcataaaatg 27546084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 1079893 - 1079994
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    ||||||||||||||  | |||||||||||||   ||||| |||||||| ||  |||||||||| |||||| |||||||| |||||||| ||| ||||||     
T  1079893 ttttacaaagaaaatgaggtattggcacaaaatccaaagcaatatagaaag--aaagtaaaaagataatgtgaatatgagagagaaagttgtcacaaaaa 1079990  T
Q  293 ttgt 296  Q
    ||||    
T  1079991 ttgt 1079994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 2688968 - 2689027
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| ||||||  |||||||||||||||| |||| ||||||||||    
T  2688968 atagagagataaagtaaaaa-ataatgtaaatatgaaagagaaagttgttgcaaaagttgt 2689027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 19521985 - 19522045
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || |||||||||||||| ||| |||||||||||    
T  19521985 atagagagagaaagtaaaaagataatgtgagtatgaaagagaaagttgtcacaaaagttgt 19522045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 20770261 - 20770161
Alignment:
Q  194 tttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||| || |||||| ||| || ||||||| ||||  ||||||||||||||||| |||||| || ||||| |||||||| ||| |||||||    
T  20770261 tttacaaagaaaaagtaggtattgacacgaaaatcaaagcaata--gagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaag 20770165  T
Q  293 ttgt 296  Q
    ||||    
T  20770164 ttgt 20770161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 22529150 - 22529035
Alignment:
Q  146 tgttatttgaacatcaatttgct--tgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||| |||||| |||||||  | ||||||||||  |||| ||  ||| ||||||||||| ||| ||||| |||||| |||||||||  | | ||||    
T  22529150 tgttatttaaacatctatttgctcttcacaactaaataaacaatcatgtttctacaaagaaaactatctattgacacaaaaatcaaagta--acaaagag 22529053  T
Q  244 ataaagtaaaaatataat 261  Q
    ||||||||||||||||||    
T  22529052 ataaagtaaaaatataat 22529035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 9581668 - 9581611
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    |||||||||||||||||||| |||||| || |||||||||||||| ||| |||||||||    
T  9581668 atagagagataaagtaaaaa-ataatgtgagtatgaaagagaaagttgtcacaaaagtt 9581611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 30640879 - 30640810
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| ||||||  ||||||| |||||||| ||| ||||||||||| | |||||||    
T  30640879 atagagagataaagtaaaaa-ataatgtaaatatgagagagaaagttgtaacaaaagttgtcacaaaatgg 30640810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 34940809 - 34940751
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaa 206  Q
    ||||||||||||||||||| |||||||| | |||||||| || ||||||| ||||||||    
T  34940809 ttatttgaacatcaatttggttgacaaccacattgacaatcatatttttataaagaaaa 34940751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 43441827 - 43441758
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| |||| |||||||||||| |||||||    
T  43441827 atagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttgttacaaaatgg 43441758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 296
Target Start/End: Original strand, 28306020 - 28306174
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||| |||||||||||||||| || |   ||||||||    ||||||||| | ||||||||||||||  | ||| ||||||||| | ||||| |||| ||    
T  28306020 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaagaccaaagcaatagag 28306119  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||  |||||| || |||||| || ||||| ||| |||| ||| |||||||||||    
T  28306120 agaga--aagtaagaagataatgtgagtatgagagataaagttgtcacaaaagttgt 28306174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 41699586 - 41699512
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaat 267  Q
    |||||||||||||||| ||||||||| ||| || |||||| ||  ||||||||| ||||||||||||| ||| ||||    
T  41699586 atttttacaaagaaaattatgtattgacacgaaaatcaaatta--atagagagagaaagtaaaaatattatgtgaat 41699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 4719781 - 4719680
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||| |||||||||  | ||||||||||||| ||||||| ||||  |||||| |||||||||| |||||| || ||||| ||| || | ||| |||||||    
T  4719781 ttttgcaaagaaaagaaagtattggcacaaaaatcaaagcaata--gagagaaaaagtaaaaacataatgtgagtatgagagaaaaggttgtcacaaaag 4719684  T
Q  293 ttgt 296  Q
    ||||    
T  4719683 ttgt 4719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 5168313 - 5168212
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    ||||||||||||||  | ||| ||||||||| ||||||| |  ||||||||| |||||||||| |||||| || ||||| ||| |||| ||| || ||||    
T  5168313 ttttacaaagaaaatgaggtagtggcacaaaaatcaaagca--atagagagagaaagtaaaaagataatgtgagtatgagagataaagttgtcactaaag 5168216  T
Q  293 ttgt 296  Q
    ||||    
T  5168215 ttgt 5168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 15267873 - 15267814
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||  |||||||| |||||||| |||| ||||||||||    
T  15267873 atagagagataaagtaaaaa-ataatatgaatatgagagagaaagttgttgcaaaagttgt 15267814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 16437546 - 16437606
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||| ||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  16437546 atagagagataaggtaaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 16437606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 35098987 - 35099046
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  35098987 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 35099046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 13310024 - 13309928
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||| || ||||||||||||||||  | |||||  |||||| | |||||||   |||||||| |||||||||| |||||| |||||||| ||||||||    
T  13310024 gacaatcaaatttttacaaagaaaatgaggtattaacacaaaaaccaaagta--gtagagagagaaagtaaaaacataatgtgaatatgagagagaaag 13309928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 19844240 - 19844348
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaagg 281  Q
    |||||||| | ||||||||||||||| | ||||||||||| | | ||||| |||    ||||| |||||||||| |||||| | |||||| ||||||||     
T  19844240 gacaaccataattttacaaagaaaaagaggtattggcacacaaaccaaagcaat----agagagaaagtaaaaacataatgtggatatgagagagaaagt 19844335  T
Q  282 tgttacaaaagtt 294  Q
    | | |||||||||    
T  19844336 tatcacaaaagtt 19844348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 2678025 - 2678108
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||||||||||||||||  || || |||||| ||||| ||| ||  |||||| |||||||||  || |||||||||||||    
T  2678025 tttacaaagaaaaatatgtattgatacgaaaatcaaaataataaagaaag--aaagtagaaatataatatgagtatgaaagagaaa 2678108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 6517801 - 6517732
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  6517801 atagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgg 6517732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 6931041 - 6931098
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    |||||||||||||||||||| |||||| || ||||||||| |||| |||| ||||||||    
T  6931041 atagagagataaagtaaaaa-ataatgtgagtatgaaagataaagttgttgcaaaagtt 6931098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 18842303 - 18842360
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||    
T  18842303 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagtt 18842360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 26791131 - 26791286
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| || |   ||||||||    ||||||||| | |||||||||| |||  |  || ||||||||| | ||||| |||| |    
T  26791131 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagttagtggcacaaaaaccaaagcaataga 26791230  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||  ||||||||| |||||| ||  |||| |||||||| ||| |||||||||||    
T  26791231 gagaga--aagtaaaaagataatgtgagcatgagagagaaagttgtcacaaaagttgt 26791286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 15952937 - 15953046
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||| | ||||| ||||||||| |  ||||||||| |  |||||||||||||| |  ||||| |||| || ||||||| |  |||||||    
T  15952937 agtgttatttgaacaaccatttggttgacaacttatgtgacaaccata-atttacaaagaaaaagtgggtatttgcacgaaaatcaaagca--atagaga 15953033  T
Q  243 gataaagtaaaaa 255  Q
    |||||||||||||    
T  15953034 gataaagtaaaaa 15953046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 4771627 - 4771543
Alignment:
Q  194 tttacaaagaaa-aatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||| ||||||| |||||||||| ||||||| ||||||| ||||  |||||||||| |||||| |||||| || |||| |||||||||    
T  4771627 tttataaagaaagaatatgtatttgcacaaaaatcaaagcaata--gagagataaaataaaaa-ataatgtgagtatgcaagagaaag 4771543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 17402903 - 17402963
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||||||||| |  ||||| | |||||| ||| |||||| ||||    
T  17402903 atagagagataaagtaaaaatataatgtgtctatgagatagaaagttgtcacaaaaattgt 17402963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 18660889 - 18660788
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||| |||  | ||||||||||||| | ||||| |||| |||||||  ||||||||| |||| | || ||||| |||||||  ||| |||||||    
T  18660889 ttttacaaaggaaatgaagtattggcacaaaaaccaaagcaatagagagaga--aagtaaaaagataacgtgagtatgagagagaaaattgtcacaaaag 18660792  T
Q  293 ttgt 296  Q
    ||||    
T  18660791 ttgt 18660788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 32873134 - 32873202
Alignment:
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||  ||||||||||||| || ||||| |||||||| ||| | ||||||||||||||| |||||    
T  32873134 tagagagataa--taaaaatataatgtgagtatgatagagaaagttgtca-aaaagttgttagaaattggtt 32873202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 33958188 - 33958285
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| |  |||||||||||||| |  ||||| |||||| | ||||| |||| |||||||  |||||||||||||||| || ||||| | ||||||    
T  33958188 tgacaaccataaatttacaaagaaaaagagatattgacacaaaaaccaaagcaatagagagaga--aagtaaaaatataatgtgagtatgatatagaaag 33958285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 35567590 - 35567546
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| |||||||||||||||||  ||||||| ||||||||    
T  35567590 atagagagagaaagtaaaaatataatgtaaatatgagagagaaag 35567546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 39054717 - 39054632
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||| |||||||||  || |||| ||||||| ||||||| |||| |||||||  ||||||||| |||||| || | ||||||||||||    
T  39054717 ttttgcaaagaaaatgatatatttgcacaaaaatcaaagcaatagagagaga--aagtaaaaacataatgtgagtgtgaaagagaaag 39054632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 39628878 - 39628819
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| ||||||||| |||| |||||| |||||||| |||||||| ||| |||||||||||    
T  39628878 atagaaagataaagttaaaa-ataatgtgaatatgagagagaaagttgtcacaaaagttgt 39628819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 5e-56; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 139 - 308
Target Start/End: Original strand, 49761073 - 49761239
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  49761073 agagtagtgttatttcaacatcaatttgcttgacaactaaatggacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagta--ata 49761170  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    || ||| ||||||||||||||||| || | ||| |||||||| || ||||||| ||||||||||||||||    
T  49761171 gaaagagaaagtaaaaatataatgtgagtgtgagagagaaagttg-tacaaaaattgttagaaaatggtt 49761239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 139 - 308
Target Start/End: Original strand, 37894128 - 37894296
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||  |||    
T  37894128 agagtagtgttatttgaacatcaatttgcttgacaactaaatggacaaccacatttttaccaagaaaagtatgtattgacacaaatatcaaagta--ata 37894225  T
Q  239 gagagataaagt-aaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| ||||| |||||| ||||| || ||||| |||||||| ||| |||||||||||||||||||||||    
T  37894226 gagagagaaagtaaaaaatgtaatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggtt 37894296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 141 - 308
Target Start/End: Original strand, 48944599 - 48944763
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatataga 240  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||  |||||    
T  48944599 agtagtgttatttgaacatcaatttgcttgacaactaaatgaacaatcatatttttacaaagaaaaatatgtattggcacaaatatcaaagta--ataga 48944696  T
Q  241 gagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||| ||||||||||| ||||  || ||||| |||||||  || ||||||||||||||||||||||||    
T  48944697 gagagaaagtaaaaatgtaatatgagtatgagagagaaaattg-tacaaaagttgttagaaaatggtt 48944763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 52100445 - 52100279
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||| |||||||||||||  |||    
T  52100445 agagtagtgttatttgaacatcaatttgcttgacaattaaatggacaatcatatttttacaaagaaaaatatgtattagcataaatatcaaagta--ata 52100348  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    || ||| |||||||||||||||||  | |||||||||||||| || ||||||| || ||| |||||||||    
T  52100347 gaaagagaaagtaaaaatataatgtaagtatgaaagagaaagttg-tacaaaaattattaaaaaatggtt 52100279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 16479816 - 16479661
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||   ||||||||||||||||||||||||||||| || |||||||||||| ||    
T  16479816 gagtagtgttatttgaacatctatttgcttgacaaccaaatagacaaccttgtttttacaaagaaaaatatgtattggcacgaaaatcaaagtaatagag 16479717  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| |||  |||||| ||||| || ||||| |||||||| ||| |||||||||||    
T  16479716 agaga-aaataaaaaatgtaatgtgagtatgagagagaaagttgtcacaaaagttgt 16479661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 139 - 308
Target Start/End: Original strand, 45186438 - 45186605
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||| ||||||||||||| |||||||| |||| |||||||| | |||||||| ||||| ||||||||| ||  || |||||||||  |||    
T  45186438 agagtagtgttattcgaacatcaatttgtttgacaaccaaatggacaaccatacttttacaacgaaaagtatgtattgacaagaaaatcaaagta--ata 45186535  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| ||||||||||||||||| ||  |||| |||||||| ||| |||||| ||||||||||||||||    
T  45186536 gagagagaaagtaaaaatataatgtgagcatgagagagaaagttgtcacaaaaattgttagaaaatggtt 45186605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 52485657 - 52485490
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| ||||| ||||||||  ||| |||||||| |||||||||||||||| ||||||||||||| || | ||||| |  |||    
T  52485657 agagttgtgttatttgaacatctatttgtttgacaacctaatggacaaccatatttttacaaagaaaagtatgtattggcacgaaaaccaaagca--ata 52485560  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||||||||||||||| || ||||| |||||||| |||  ||||| |||||| |||||||||    
T  52485559 gagagataaagtaaaaatataatgtgagtatgacagagaaagttgtcgcaaaaattgttataaaatggtt 52485490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 304
Target Start/End: Complemental strand, 33796452 - 33796288
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||| ||||||||||| ||||||||| |||||||  | ||||||||||| ||||||| |||||||| ||||| |||||||||| |||||||||  ||    
T  33796452 tagagtaatgttatttgaaaatcaatttggttgacaatcacattgacaaccatatttttataaagaaaagtatgtgttggcacaaaaatcaaagta--at 33796355  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    || |||| ||||||||||||||||  || ||||| |||||||| ||| |||||| ||||||||||||    
T  33796354 agggagaaaaagtaaaaatataatatgagtatgagagagaaagttgtcacaaaaattgttagaaaat 33796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 138 - 306
Target Start/End: Original strand, 54099242 - 54099408
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||| ||||||||||||||||||||| ||||||| || |||||||| || |||||||||||||||| ||| | |||||| ||| ||||||| |  ||    
T  54099242 tagagtaatgttatttgaacatcaatttggttgacaattacattgacaatcatatttttacaaagaaaagtatatgttggcataaaaatcaaagca--at 54099339  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||| ||||||||||||||||  ||  || | |||||||| ||| |||||||||||||||||||||    
T  54099340 agagagagaaagtaaaaatataatatgagcataagagagaaagttgtcacaaaagttgttagaaaatgg 54099408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 173 - 305
Target Start/End: Original strand, 45657690 - 45657820
Alignment:
Q  173 aactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaa 272  Q
    |||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||  || || ||     
T  45657690 aactaaattgacaatcacatttatataaagaaaagtatgtattggcacaaatatcaaagta--atagagagaaaaagtaaaaatataatatgagtaagag 45657787  T
Q  273 agagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||| | ||| |||||| |||||||||||||    
T  45657788 agagaacgttgtcacaaaaattgttagaaaatg 45657820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 308
Target Start/End: Complemental strand, 26772555 - 26772386
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttac-aaagaaaaatatgtattggcacaaatatcaaagtaata 236  Q
    ||||||||||||||||||||||| ||||| |||||| | |||| |||||||  |||||||| |||||||| ||||||||| ||| || |||||| ||  |    
T  26772555 tagagtagtgttatttgaacatctatttgtttgacatccaaatagacaaccttatttttacaaaagaaaactatgtattgacacgaaaatcaaaata--a 26772458  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||| ||| ||||||| ||||| |||||||| |||||||| ||| |||||| || ||| |||||||||    
T  26772457 tagagagagaaaataaaaatgtaatgtgaatatgagagagaaagttgtcacaaaaattattataaaatggtt 26772386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 308
Target Start/End: Complemental strand, 26550406 - 26550255
Alignment:
Q  155 aacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaa 254  Q
    ||||||||||||  ||||||| |||| ||||| ||||||||||||||||||| | |||| | ||||||| || ||||||  ||||||||| |||||||||    
T  26550406 aacatcaatttgtgtgacaaccaaatggacaatcacatttttacaaagaaaagtgtgtactagcacaaaaattaaagta--atagagagagaaagtaaaa 26550309  T
Q  255 atataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
     ||||||| |||||||| |||||||| ||| |||||| || ||| |||||||||    
T  26550308 ttataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaatggtt 26550255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 23868869 - 23869003
Alignment:
Q  143 tagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagaga 242  Q
    |||||||||||||||||| |||||||||||||| |||| ||||| || |||||||||| |||||| ||||||||||||||| |||||| ||  ||||| |    
T  23868869 tagtgttatttgaacatctatttgcttgacaaccaaatagacaatcatatttttacaaggaaaaaaatgtattggcacaaaaatcaaaata--atagaaa 23868966  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
     | || ||||||| |||||| || |||||||||||||    
T  23868967 aagaacgtaaaaaaataatgtgagtatgaaagagaaa 23869003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 36755944 - 36756102
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||| ||||||||| |||||||  | ||||||||||| |||||||||||||||| ||| | |||||||||| ||||||| |  |||||||||     
T  36755944 tgttatttgaatatcaatttgattgacaatcacattgacaaccatatttttacaaagaaaagtatatgttggcacaaaaatcaaagca--atagagagag 36756041  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||| |||||||||||||||| ||||| ||| |||| | | | |||| | ||||||||||||    
T  36756042 aaaataaaaatataatgcgagtatgagagaaaaagttatcataaaaatggttagaaaatgg 36756102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 1436994 - 1436834
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| || ||||| | ||||||||||| |||||||||||||||| ||||| |||||||||| |  |||  |  |||||||||     
T  1436994 tgttatttgaacatcaatttggtttacaaccacattgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaaataaa--acaatagagagag 1436897  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||| | |||||| | |||  |||||||| |||| ||||||||    
T  1436896 aaagtaaaaatataatgtgagtataagagagaatgttgtctcaaaagttattaggaaatggtt 1436834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 26452616 - 26452776
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||| |||||| || ||||||| || || ||||| ||  |||||||||||||||  |||||||| ||   | ||||||| |  |||||||||     
T  26452616 tgttatttgaatatcaatgtgattgacaattatatggacaatcatctttttacaaagaaaatcatgtattgacagggaaatcaaagca--atagagagag 26452713  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||||| |||||||| ||| |||||||||||||||||||||||    
T  26452714 aaagtaaaaatataatgtgagtatgagagagaaagttgtaacaaaagttgttagaaaatggtt 26452776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 51699036 - 51698877
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| | ||||||||||| ||| |||||||||||| ||||| |||||||||| | ||||  |||| |||||||     
T  51699036 tgttatttgaacatcaatttggttgacaaccacattgacaaccatattcttacaaagaaaagtatgtgttggcacaaaaaccaaatcaatagagagagaa 51698937  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||   ||| ||| |||  |||||||| |||||||| ||| |||||| | |||||||||||    
T  51698936 aataaaaatataaaatatgaatatgagagagaaagttgtcacaaaaatggttagaaaatg 51698877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 52714877 - 52714753
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||| |  ||||||||| |||||||||||||||||  | ||||| |||||||    
T  52714877 ttgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaatcaaagca--atagagagagaaagtaaaaatataatgtaagtatgagagagaaa 52714780  T
Q  280 ggtgttacaaaagttgttagaaaatgg 306  Q
    | | | |||||| ||||||||||||||    
T  52714779 gttatcacaaaaattgttagaaaatgg 52714753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 296
Target Start/End: Complemental strand, 34592250 - 34592093
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||||||||||||||||||| ||||| ||||||   |||| ||||||    ||||||||||||||| ||||||||| ||| || ||||||||||||     
T  34592250 tagagtagtgttatttgaacatctatttgtttgacagtcaaatagacaacattgtttttacaaagaaaagtatgtattgacacgaaaatcaaagtaataa 34592151  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||| |||  |||||| |||||  | ||||| |||||||| ||| |||||||||||    
T  34592150 agagaga-aaataaaaaatgtaatgtaagtatgagagagaaagttgtcacaaaagttgt 34592093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 35376968 - 35377124
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| ||||   ||||||||    ||||||||| | ||||||||||||||  ||||||||||||||| ||||||| |  |||    
T  35376968 agagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtattggcacaaaaatcaaagca--ata 35377065  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtt 297  Q
    |||| | |||||||||| |||||| || | ||| |||||||| ||| ||||||||||||    
T  35377066 gagaaagaaagtaaaaacataatgtgagtgtgagagagaaagttgtcacaaaagttgtt 35377124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 48353140 - 48353016
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    ||||||| || ||||||| |||||||| ||||| |||| ||||| ||||||| |||| |||||||  |||||||||||||||  || ||||| |||||||    
T  48353140 ttgacaatcatatttttataaagaaaagtatgtgttggtacaaaaatcaaagcaatagagagaga--aagtaaaaatataatatgagtatgagagagaaa 48353043  T
Q  280 ggtgttacaaaagttgttagaaaatgg 306  Q
    | ||| ||||||||||||| |||||||    
T  48353042 gttgtcacaaaagttgttaaaaaatgg 48353016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 49021855 - 49021731
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||| |  || |||||| ||| ||||||||||||| || ||||| | |||||    
T  49021855 ttgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaatcaaagca--attgagagacaaaataaaaatataatgtgagtatgagaaagaaa 49021758  T
Q  280 ggtgttacaaaagttgttagaaaatgg 306  Q
    | ||| ||||||||| ||| |||||||    
T  49021757 gttgtcacaaaagttattaaaaaatgg 49021731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 301
Target Start/End: Complemental strand, 29781082 - 29780922
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||| ||||||||| ||||||||||| |||||||  | || ||||| || ||||||| |||||||| | ||||||||||| || ||||||  |  |||    
T  29781082 agagtaatgttatttggacatcaatttgattgacaatcatatggacaatcatatttttataaagaaaagtttgtattggcacgaaaatcaaa--acaata 29780985  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaa 301  Q
    |||| | ||||||||||||||||| |||||||| | ||||   ||  ||||||||||||||||    
T  29780984 gagaaaaaaagtaaaaatataatgtgaatatgagaaagaagattggcacaaaagttgttagaa 29780922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 29916955 - 29917074
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||| ||| ||||| ||| |||||| ||||||| |||||| |      |||||||||||||||| || ||||| |||||||    
T  29916955 ttgacaaccatatttttacaaaggaaagtatgtgttgacacaaaaatcaaagcaatataaa------aagtaaaaatataatgtgagtatgagagagaaa 29917048  T
Q  280 ggtgttacaaaagttgttagaaaatg 305  Q
    | ||| |||||||||||||| |||||    
T  29917049 gttgtcacaaaagttgttaggaaatg 29917074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 29966108 - 29966227
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||| ||| ||||| ||| |||||| ||||||| |||||| |      |||||||||||||||| || ||||| |||||||    
T  29966108 ttgacaaccatatttttacaaaggaaagtatgtgttgacacaaaaatcaaagcaatataaa------aagtaaaaatataatgtgagtatgagagagaaa 29966201  T
Q  280 ggtgttacaaaagttgttagaaaatg 305  Q
    | ||| |||||||||||||| |||||    
T  29966202 gttgtcacaaaagttgttaggaaatg 29966227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 52963254 - 52963369
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    |||||||||||||||||||||||||| |||||| |  ||||||||| | | |||  |||||||||||||||  |||||||| ||| |||  ||| |||||    
T  52963254 atttttacaaagaaaaatatgtattgacacaaaaactaaagtaatagaaaaaga--aagtaaaaatataatatgaatatgagagaaaaaattgtcacaaa 52963351  T
Q  291 agttgttagaaaatggtt 308  Q
    |||||||| |||||||||    
T  52963352 agttgttaaaaaatggtt 52963369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 29573249 - 29573409
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    ||||||||||||| | ||||| | ||||| | | |||||||||| |  ||||||||| |||| || || ||||||| || ||||||| ||||  ||||||    
T  29573249 tgttatttgaacaaccatttgatagacaatttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaata--gagaga 29573346  T
Q  245 taaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||| ||| || || ||||| |||||||| ||| ||||||||||||| |||||||||    
T  29573347 taaagtaaaaacata-tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggtt 29573409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 19150247 - 19150369
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| ||||||| |||||||| ||| | ||| |||||| ||||||  |||| |||||||  |||||||| |||||||  ||||||| |||||||    
T  19150247 ttgacaaccatatttttataaagaaaagtatttgttgacacaaaaatcaaaacaatagagagaga--aagtaaaa-tataatgtaaatatgagagagaaa 19150343  T
Q  280 ggtgttacaaaagttgttagaaaatg 305  Q
    | ||| ||||||||||||| ||||||    
T  19150344 gttgtcacaaaagttgttaaaaaatg 19150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 44813388 - 44813496
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    ||||||||||||||  |||||||| ||| || | ||||| ||||  |||||||||||||||||||||||| || ||||  ||||| || ||| |||||||    
T  44813388 ttttacaaagaaaaccatgtattgacacgaaaaccaaagcaata--gagagataaagtaaaaatataatgtgagtatg--agagagagttgtcacaaaag 44813483  T
Q  293 ttgttagaaaatg 305  Q
    |||||||||||||    
T  44813484 ttgttagaaaatg 44813496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 48287804 - 48287689
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    ||||||||||||||||||||||||| |||| || |||||||||  ||||||||| ||| | ||||||||||| ||  |||| | |||||  | | |||||    
T  48287804 atttttacaaagaaaaatatgtattagcacgaaaatcaaagta--atagagagagaaaattaaaatataatgtgagaatgagaaagaaaattatcacaaa 48287707  T
Q  291 agttgttagaaaatggtt 308  Q
    |||||||| |||||||||    
T  48287706 agttgttataaaatggtt 48287689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 36907216 - 36907120
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    ||||||||||||| ||||| ||  ||||  ||| |||||||| ||||||||||||||| ||||||||| |||| || | |||||||||| |||||||    
T  36907216 ttatttgaacatctatttgtttagcaacctaatggacaaccatatttttacaaagaaatatatgtatttgcacgaaaaacaaagtaatagagagaga 36907120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 21196254 - 21196144
Alignment:
Q  194 tttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||| |||||||| |||| || |||||||||  |||||||||||||||||||| ||||||  | ||||| |||||||| ||| ||| |||    
T  21196254 tttacaaagaaaaaatatgtatttgcacgaaaatcaaagta--atagagagataaagtaaaaa-ataatgtaagtatgagagagaaagttgtcacagaag 21196158  T
Q  293 ttgttagaaaatgg 306  Q
    |||| | |||||||    
T  21196157 ttgtcacaaaatgg 21196144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 48405498 - 48405428
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||| |||||||||| |||||| || ||||| |||||||| ||||||||||||||| | |||||||||    
T  48405498 agagagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggtt 48405428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 5244371 - 5244258
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | |||||||||| |||  | ||| ||||||||| | ||||| |||| |||||||  ||||||||| |||||| || ||||| ||||||||    
T  5244371 tgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagaga--aagtaaaaaaataatgtgagtatgagagagaaag 5244274  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  5244273 ttgtcacaaaagttgt 5244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 8821719 - 8821660
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||||||||||||||    
T  8821719 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttacaaaagttgt 8821660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 49167840 - 49167780
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||||||||| |  ||||| |||||||| ||| |||||||||||    
T  49167840 atagagagataaagtaaaaatataatgtgtgtatgagagagaaagttgtcacaaaagttgt 49167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 280
Target Start/End: Complemental strand, 1261247 - 1261112
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaa--aaatatgtattggcacaaatatcaaagtaatatagaga 242  Q
    |||||||||||| ||| ||||| |||||||| ||||  ||||  | ||||||||||| ||  | |||||||||||||  || |||||||||  ||||| |    
T  1261247 gtgttatttgaatatccatttgtttgacaaccaaatgtacaattatatttttacaaaaaaatatatatgtattggcatgaaaatcaaagta--atagaaa 1261150  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    || ||| ||||||||||||| || ||| ||||||||||    
T  1261149 gagaaattaaaaatataatgtgagtataaaagagaaag 1261112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 36122005 - 36121891
Alignment:
Q  139 agagtagtgttatttgaacatc-aatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatg-tattggcacaaatatcaaagtaata 236  Q
    |||| ||||||||||||||| | |||||| | ||||||| | |||||||||| ||||| |||||||||||| || |||||||||||| |||| || ||||    
T  36122005 agaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatatttt-acaaagaaaaatgtggtattggcacaaaaatcatagcaata 36121908  T
Q  237 tagagagataaagtaaaaa 255  Q
      |||||||||||||||||    
T  36121907 --gagagataaagtaaaaa 36121891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 26996401 - 26996344
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtta 298  Q
    |||||||||||||||| |||||| || ||||| |||||||| |||||||||||||||||    
T  26996401 agagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttacaaaagttgtta 26996344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 31376747 - 31376816
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| || ||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  31376747 atagagagataaagtaaaaa-attatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatgg 31376816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 37302654 - 37302575
Alignment:
Q  215 tggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| | |||||||||| |||||||  |||||||||  ||||| |||||||| |||||||| ||| |||||||||||    
T  37302654 tggcacaaaaaccaaagtaatagagagaga--aagtaaaaaggtaatgtgaatatgagagagaaagttgtcacaaaagttgt 37302575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 42358597 - 42358680
Alignment:
Q  211 gtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||| |||||| ||||||| ||||  ||||||||||||||||| |||||| || ||||| |||||||| ||| |||||| ||||    
T  42358597 gtattgacacaaaaatcaaagcaata--gagagataaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaaattgt 42358680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 44856137 - 44855982
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| || |   ||||||||    ||||||||| | |||||||||| |||  | ||| ||||||||| ||||||| |||| |    
T  44856137 agagttgtgttatttgaacatccatatatgtgacaacttgtatgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagaaataga 44856038  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||  |||||||||  ||||| || |||||  ||||||| ||| |||||||||||    
T  44856037 gagaga--aagtaaaaaggtaatgtgagtatgagtgagaaagttgtcacaaaagttgt 44855982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 10811263 - 10811153
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    |||||||||| ||  |||||| |||||||| ||||| |||| |||||||  | ||||||| | |||| || ||||| |||||||| ||| ||||||||||    
T  10811263 tacaaagaaatatgagtattgacacaaataccaaagcaatagagagaga--aggtaaaaacacaatgtgagtatgagagagaaagttgtcacaaaagttg 10811166  T
Q  296 ttagaaaatggtt 308  Q
    | | |||||||||    
T  10811165 tcataaaatggtt 10811153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 11633702 - 11633642
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtt 297  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||| |||| |||||||||||    
T  11633702 atagagagataaagtaaaaag-taatgtgaatatgagagagaaagttgttgcaaaagttgtt 11633642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 291
Target Start/End: Original strand, 24095298 - 24095442
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||||| ||||| |||||||||    ||||||||| |  |||||||||||||| || ||||| |||| || | ||||| |  |||||||    
T  24095298 agtgttatttgaacatccatttggttgacaacttttatgacaaccata-atttacaaagaaaaagtaggtatttgcacgaaaaccaaagca--atagaga 24095394  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
     |||||||||||| |||||| || ||||| |||||||| ||| ||||||    
T  24095395 aataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaa 24095442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 3648665 - 3648597
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||||||||| |||| |||||||| |||||||  ||| ||||||||| | | |||||||||    
T  3648665 agagataaagtaaaaatacaatgtgaatatgagagagaaaattgtcacaaaagttatcataaaatggtt 3648597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 6093860 - 6093920
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| ||||||||| ||||| ||| |||| ||| |||||||||||    
T  6093860 atagagagagaaagtaaaaagataatgcgagtatgagagataaagttgtcacaaaagttgt 6093920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 305
Target Start/End: Complemental strand, 6999354 - 6999190
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaag-aaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||| ||||||||||||||| | ||||| ||||||||| |   |||||||| |  ||||||| | ||||||||||||| |||| || ||||||| |  ||    
T  6999354 agaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccata-atttacaatgaaaaaatatgtatttgcacgaaaatcaaagca--at 6999258  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||| |||||||||||| |||||| || || || ||| |||| | ||||| ||||||| | ||||||    
T  6999257 agagaaataaagtaaaaaaataatgtgagtaagagagaaaaagttattacagaagttgtcataaaatg 6999190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 20547919 - 20548032
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | |||||||||| |||  | ||| ||||||||| ||||||| |||| |||||||  ||||||||| |||| | || ||||| |||||||     
T  20547919 tgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagcaatagagagaga--aagtaaaaagataacgtgagtatgagagagaaaa 20548016  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  20548017 ttgtcacaaaagttgt 20548032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 21195872 - 21195932
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||||||||  |  ||||| |||||||| ||| |||||||||||    
T  21195872 atagagagataaagtaaaaatataatatgtgtatgagagagaaagttgtcacaaaagttgt 21195932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 26014901 - 26014841
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  26014901 atagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 26014841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 41505580 - 41505520
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  41505580 atagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 41505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 308
Target Start/End: Complemental strand, 47742459 - 47742302
Alignment:
Q  147 gttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagata 246  Q
    |||||||||||| ||||||| |||||||| | ||| ||||| | |||||||| |||| || ||||| |||| ||||| || |||| |||    ||||| |    
T  47742459 gttatttgaacagcaatttggttgacaaccacattaacaactatatttttacgaagagaagtatgtgttggaacaaaaattaaagcaat----agagaga 47742364  T
Q  247 aagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    || ||||||||||||  || ||||| | |||||| | | | ||||||| |||| ||||||||    
T  47742363 aattaaaaatataatatgagtatgagaaagaaagttatcataaaagttattaggaaatggtt 47742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 6178384 - 6178467
Alignment:
Q  211 gtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||| |||||| ||||||| |||| |||||||  ||||||||| |||||| || ||||| |||||||  ||| |||||||||||    
T  6178384 gtattgacacaaaaatcaaagcaatagagagaga--aagtaaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgt 6178467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 12762631 - 12762681
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    ||||||||||||||||  ||||| |||||| |||||||||||| |||||||    
T  12762631 tttacaaagaaaaatagttattgacacaaaaatcaaagtaataaagagaga 12762681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 28419196 - 28419257
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtta 298  Q
    |||||||||||||||||||| ||||||  | ||||||| |||||| |||| ||||||||||||    
T  28419196 atagagagataaagtaaaaa-ataatgtaagtatgaaaaagaaagttgttgcaaaagttgtta 28419257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 39338709 - 39338767
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    ||||||||| ||||||||||||||||| || |||  ||||||||| ||| |||||||||    
T  39338709 atagagagaaaaagtaaaaatataatgtgactatagaagagaaagttgtcacaaaagtt 39338767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 45055063 - 45054994
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||| ||||||||| || ||| || |||||| ||||||| ||| ||||||||||| |||||||||    
T  45055063 atagagagatgaagtaaaaa-atgatgtgagtatgaacgagaaagttgtaacaaaagttgtcagaaaatgg 45054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 50206952 - 50207021
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| |||| |||||||||| | |||||||    
T  50206952 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatgg 50207021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 54773737 - 54773795
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||| |||||  || ||||| |||||||| ||||| |||||||||    
T  54773737 agagagataaagtaaaaaaataatatgagtatgagagagaaagttgttataaaagttgt 54773795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 55400088 - 55400019
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  55400088 atagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgg 55400019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 658744 - 658826
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaaga 275  Q
    |||||||||||||||| ||||||||| ||| || | |||||||   || ||| ||||||||||| ||||||  ||||||||||||    
T  658744 atttttacaaagaaaattatgtattgacacgaaaaccaaagta--ttaaagaaataaagtaaaattataatatgaatatgaaaga 658826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 27718768 - 27718836
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||||||| |||||| ||| || || ||||| |||||||| ||| ||||||||||||| ||||||    
T  27718768 atagagagataaaataaaaacata-tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatg 27718836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 296
Target Start/End: Complemental strand, 34456918 - 34456820
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    ||||||||||  || ||||||||||||| || |||| |||| |||||||  ||||||||| |||||  || ||||| |||||||| | | ||||||||||    
T  34456918 tacaaagaaatttaggtattggcacaaaaattaaagcaatagagagaga--aagtaaaaagataatatgagtatgagagagaaagttatcacaaaagttg 34456821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 50314737 - 50314671
Alignment:
Q  211 gtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||| |||||| |||||||||  ||||||||| |||||||||| |||||| || ||||| |||||||    
T  50314737 gtattgacacaaaaatcaaagta--atagagagagaaagtaaaaacataatgtgagtatgagagagaaa 50314671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 3518566 - 3518633
Alignment:
Q  211 gtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||| |||||| ||||||| |||| ||| ||||||| ||||||  ||||| ||||||||||||||||    
T  3518566 gtattgacacaaaaatcaaagcaatagaga-agataaaataaaaacgtaatgtgaatatgaaagagaaa 3518633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 5527484 - 5527444
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaa 223  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  5527484 acaaccatatttttacaaagaaatatatgtattgacacaaa 5527444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 30909118 - 30909059
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| |||||| | |||||||| |||| ||||||||||    
T  30909118 atagagagataaagtaaaaa-gtaatgtgaatataagagagaaagttgttgcaaaagttgt 30909059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 37927187 - 37927246
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| || ||| || ||||| |||||||| ||| |||||||||||    
T  37927187 atagagagataaagtaaaaa-attatgtgagtatgagagagaaagttgtcacaaaagttgt 37927246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 39629820 - 39629880
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| |||||| | ||| |||||||||||    
T  39629820 atagagagagaaagtaaaaacataatgtgagtatgagagagaaggttgtcacaaaagttgt 39629880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 44677466 - 44677525
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||  |||| ||||||||||    
T  44677466 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgttgcaaaagttgt 44677525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 44962113 - 44962169
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaata 236  Q
    ||||||||||  |||||||||| ||||||||||||||  || || ||||||||||||    
T  44962113 ttgacaaccatgtttttacaaaaaaaaatatgtattgatacgaaaatcaaagtaata 44962169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 45711421 - 45711481
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||  ||| |||||||||||    
T  45711421 atagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgt 45711481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 46019551 - 46019492
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| |||||||||||    
T  46019551 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgtcacaaaagttgt 46019492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 46623996 - 46623936
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| ||| |||||||||| |||||| |||||| | |||||||| ||| |||||||||||    
T  46623996 atagaaagagaaagtaaaaagataatgtgaatatcagagagaaagttgtcacaaaagttgt 46623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 49363233 - 49363292
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| |||| ||||||||||    
T  49363233 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgttgcaaaagttgt 49363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 49417664 - 49417605
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||| |||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  49417664 atagagagataaaataaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgt 49417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 51771354 - 51771386
Alignment:
Q  142 gtagtgttatttgaacatcaatttgcttgacaa 174  Q
    ||||||||||||||||||| |||||||||||||    
T  51771354 gtagtgttatttgaacatctatttgcttgacaa 51771386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 52089820 - 52089888
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaa 206  Q
    |||||||||||||||| |||||| |||   ||||||||||||| |||||    ||||||||||||||||    
T  52089820 tagagtagtgttatttaaacatctattaatttgacaactaaatagacaattttatttttacaaagaaaa 52089888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 52326108 - 52326048
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| ||  |||| |||||||| ||| |||||||||||    
T  52326108 atagagagagaaagtaaaaagataatgtgagcatgagagagaaagttgtcacaaaagttgt 52326048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 53870976 - 53871057
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| ||  ||||||||||||||| ||||| |  ||||||||| || ||||||| | |||| |||||||| |||||||    
T  53870976 tacaaagaaatatgagtattggcacaaataccaaagca--atagagagagaaggtaaaaacaaaatgtgaatatgagagagaaa 53871057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 54195429 - 54195385
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||    
T  54195429 atagagagataaagtaaaaaaataatgtgagtataaaagagaaag 54195385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 139 - 304
Target Start/End: Original strand, 1795868 - 1796031
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||    
T  1795868 agagtagtgttatttgaacatcaatttgcttaacaactaaatggacaaccacatttttaccaagaaaagtatgtattggcacaaatatcaaagta--ata 1795965  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||||||||||||||||||| || ||||| ||| |||| | | ||||||||||||| |||||    
T  1795966 gagagataaagtaaaaatataatgtgagtatgagagataaagttatcacaaaagttgttaaaaaat 1796031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 139 - 307
Target Start/End: Complemental strand, 49585179 - 49585013
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||    
T  49585179 agagtagtgttatttgaacattaatttgcttgacaactaaatggacaaccacatttttaccaagaaaagtatgtattggcacaaatatcaaagta--ata 49585082  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggt 307  Q
    |||||| ||||||||||||||||| || ||||| |||||||| |||  ||||| || ||||||||||||    
T  49585081 gagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcccaaaaattattagaaaatggt 49585013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 140 - 308
Target Start/End: Original strand, 11546788 - 11546955
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||||||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||  ||||    
T  11546788 gagtagtgttatttgaacatcaatttacttgacaatcaaatggacaaccacatttttacaaaaaaaattatgtattggcacaaatatcaaagta--atag 11546885  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttac-aaaagttgttagaaaatggtt 308  Q
    ||||| ||||||||||||||||  |||||||| |||||||| | | || |||||||||||||||||||||    
T  11546886 agagagaaagtaaaaatataatatgaatatgagagagaaagttatcacaaaaagttgttagaaaatggtt 11546955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 148 - 308
Target Start/End: Complemental strand, 48649694 - 48649536
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataa 247  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||  |||||||||||||||  ||||||||| ||    
T  48649694 ttatttgaacatcaatttgtttgacaactaaatagacaaccacattttaacaaagaaaagtatgtattgaaacaaatatcaaagta--atagagagaaaa 48649597  T
Q  248 agtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||| ||||||| ||||| |||||||  ||| |||||||||||||||||||||||    
T  48649596 agtaaaaataaaatgcgagtatgagagagaaaattgtcacaaaagttgttagaaaatggtt 48649536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 140 - 291
Target Start/End: Complemental strand, 50980774 - 50980625
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50980774 gagtaatgttatttaaacatcaatttgctggacaactaaatggacaatcacatttttacaaagaaaagtatgtattggcacaaatatcaaagtaatatag 50980675  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||  ||||||||||||||||| || ||||| |||||| | ||||| ||||    
T  50980674 agag--aaagtaaaaatataatgtgagtatgagagagaaggttgttagaaaa 50980625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 140 - 305
Target Start/End: Original strand, 44257618 - 44257780
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||| ||||||||  ||||||||||||| ||  ||||    
T  44257618 gagtagtgt-atttgaacatcaatttgtttgacaactaaatggacaatcacatttttataaagaaaagtatgtattaacacaaatatcaaaata--atag 44257714  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||| ||||||||||||||||| || ||||| |||||||| ||| |||||| |||||||||||||    
T  44257715 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattgttagaaaatg 44257780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 140 - 296
Target Start/End: Original strand, 55609052 - 55609207
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||   ||||||||||||||||||||||||||||| || |||||||||||| ||    
T  55609052 gagtagtgttatttgaacatctatttgcttgacaaccaaatagacaaccttgtttttacaaagaaaaatatgtattggcacgaaaatcaaagtaatagag 55609151  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| |||  |||||| ||||| || ||||| |||||||| ||| |||||||||||    
T  55609152 agaga-aaataaaaaatgtaatgtgagtatgagagagaaagttgtcacaaaagttgt 55609207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 16019654 - 16019497
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||  | ||||||||||| ||||||| |||||||||||||  ||| |||||| ||||||| |  |||||||||     
T  16019654 tgttatttgaacatcaatttgattgacaagcatattgacaaccatatttttataaagaaaaatatgcgttgacacaaaaatcaaagca--atagagagag 16019557  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||||||||||| || ||||||||| |||  ||| | ||||||||||||||||||    
T  16019556 aaagtaaaaatataatgtgagtatgaaagaaaaaattgtcataaaagttgttagaaaatg 16019497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 139 - 305
Target Start/End: Original strand, 36123347 - 36123510
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||| |||||||||||||  |||| |||||| |  ||||||||||||||| |||| ||| ||||||| |||||||||||| |    
T  36123347 agagtagtgttatttgaacatctatttgcttgacaatcaaatagacaac-atgtttttacaaagaaaagtatgcatttgcacaaaaatcaaagtaataga 36123445  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||  ||||||||||||||||  | ||||| |||||||| ||| | ||||||||||| ||||||    
T  36123446 gagaga--aagtaaaaatataatgtaagtatgagagagaaagttgtcataaaagttgttataaaatg 36123510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 296
Target Start/End: Complemental strand, 193715 - 193562
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatataga 240  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||| ||  ||||||||||||||||||||||||| ||| || |||||||||  |||||    
T  193715 agtagtgttatttgaacatctatttgcttgacaaccaaatagacaatcatgtttttacaaagaaaaatatgtattgacacgaaaatcaaagta--ataga 193618  T
Q  241 gagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||| ||| |||||||| | || || |||||  ||||||  ||| |||||||||||    
T  193617 gagagaaaataaaaatacagtgtgagtatgagggagaaaattgtcacaaaagttgt 193562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 15522532 - 15522372
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||||| || |||||||| | || ||||||||  |||||||||||||||  |||||||| ||| || | ||||| |||||  ||||||    
T  15522532 tgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatgtattgacacgaaaaccaaagcaatat--agagat 15522435  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||| ||| || || || |||||||| | | |||||||||||||||||||||||    
T  15522434 aaagtaaaaatattatgtgagtaggagagagaaagttatcacaaaagttgttagaaaatggtt 15522372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 308
Target Start/End: Complemental strand, 32224110 - 32223949
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    ||||||||| ||||||| ||||||||||||||||||| || |||||  ||||||||||| |||||||| ||||||||||| || ||| ||  ||||||||    
T  32224110 agtgttattcgaacatctatttgcttgacaactaaatagataaccatgtttttacaaag-aaaatatgcattggcacaaaaattaaaata--atagagag 32224014  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
      |||||||||||||||||  | ||||| | |||||| | | ||||||||||||| |||||||||    
T  32224013 taaaagtaaaaatataatgtaagtatgagaaagaaagttatcacaaaagttgttataaaatggtt 32223949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 47015183 - 47015029
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||| |||| |||||||| | |||||||| || |||||||||||||||| ||| |||||||||||| | ||||| |||    |||||     
T  47015183 tgttatttgaacatcagtttggttgacaaccacattgacaatcatatttttacaaagaaaagtatctattggcacaaaaaccaaagcaat----agagag 47015088  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    ||| |||| ||||| || || |||||||||||||| ||| |||||||||||||| ||||    
T  47015087 aaaataaagatatattgtgagtatgaaagagaaagttgtcacaaaagttgttaggaaat 47015029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 308
Target Start/End: Original strand, 19165319 - 19165480
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaacta-aattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||| |||||||||||||||||||||| ||||||| |  ||| |||||||| ||||||||||||||||||||||||||||||||| | ||||  |||| |    
T  19165319 gagttgtgttatttgaacatcaatttgtttgacaaatctaatggacaaccatatttttacaaagaaaaatatgtattggcacaaaaaccaaaacaataga 19165418  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||      ||||||||||||||| || ||||  ||| |||| | | ||||||||||||| |||||||||    
T  19165419 gag------agtaaaaatataatgtgagtatg--agataaagttctcacaaaagttgttataaaatggtt 19165480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 20118968 - 20118799
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||| ||||||||||| ||  ||||| |||||||| || | ||||||   ||||||| |||||||| |||||||||  || || |  ||||||| |||    
T  20118968 agagtactgttatttgaatatttatttgtttgacaaccaattggacaacgttatttttataaagaaaattatgtattgatacgaaaactaaagtaaaata 20118869  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||| | ||||||||||||||||| |||||| | |||||||| | || |||||||||||| |||||||||    
T  20118868 gagatagaaagtaaaaatataatgtgaatataagagagaaagttattgcaaaagttgttataaaatggtt 20118799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 39478579 - 39478464
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | ||||||||||||||  | |||||| |||||| |||||||||||||||||| | |||||||||| |||||  || ||||| ||||||||    
T  39478579 tgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagtaatatagagaaagaaagtaaaaaaataatatgagtatgagagagaaag 39478480  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  39478479 ttgtcacaaaagttgt 39478464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 307
Target Start/End: Complemental strand, 34363735 - 34363572
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||| |||||||||||||||  ||||| |||||| || ||  |||||||||||| |||||||||||| ||||||||||||| ||  ||| |  |||||      
T  34363735 gagttgtgttatttgaacatttatttgtttgacagcttaacagacaaccacattattacaaagaaaagtatgtattggcacgaaagtcataacaatat-- 34363638  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggt 307  Q
      ||||||||| ||||||||||| || ||||| ||| |||| | | ||||||||||||| ||||||||    
T  34363637 --agataaagtgaaaatataatgtgagtatgagagataaagttatcacaaaagttgttataaaatggt 34363572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 46665097 - 46665202
Alignment:
Q  155 aacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaa 254  Q
    |||||||| ||| |||||||| ||||||||||||| || ||||||||||||| |||||||||||| ||| ||||||| |  | ||||||| ||| |||||    
T  46665097 aacatcaacttgattgacaaccaaattgacaaccatatatttacaaagaaaagtatgtattggcataaaaatcaaagca--aaagagagagaaaataaaa 46665194  T
Q  255 atataatg 262  Q
    ||||||||    
T  46665195 atataatg 46665202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 31468882 - 31469042
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||| |||||| || |||||||| | || ||||| ||  |||||||||||||||  |||||||| ||| || |  |||||||||  |||| ||    
T  31468882 tgttatttgaatatcaatgtgattgacaaccatatagacaatcatctttttacaaagaaaatcatgtattgacacgaaaactaaagtaata--gagaaat 31468979  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| ||  || | |||||||  ||| |||||| ||||||||||||||||    
T  31468980 aaagtaaaaatataatgtgagcataagagagaaaattgtcacaaaaattgttagaaaatggtt 31469042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 31574855 - 31574993
Alignment:
Q  168 ttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaat 267  Q
    |||||||| | || ||||||||  |||||||||||||||  ||||||||  ||||| ||||||| |||| ||||||| ||  ||||||||||||| || |    
T  31574855 ttgacaaccacatggacaaccatctttttacaaagaaaatcatgtattgatacaaaaatcaaagcaatagagagagaaaa--taaaaatataatgtgagt 31574952  T
Q  268 atgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||| |||||||  | | ||||||||||| |||||||||||    
T  31574953 atgagagagaaaattatcacaaaagttgtcagaaaatggtt 31574993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 50831641 - 50831797
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||| |||||||||||||| | ||||| |||||||||     |||||||| | ||||||||||||||| | || ||| |||||| ||||||| |  ||    
T  50831641 tagagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagca--at 50831738  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||| |||||||| | || ||| || ||||| || ||||| |||||||||||||||    
T  50831739 agagagagaaagtaaagacatgatgtgagtatgagagggaaagttgttacaaaagttgt 50831797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 37514025 - 37514183
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    ||||||||||||| | ||||| | || || | | |||||||||| |  |||||||||||||| || || ||||||| || ||||||| ||||  ||||||    
T  37514025 tgttatttgaacaaccatttgatagagaatttatttgacaaccataaatttacaaagaaaaagtaggttttggcacgaaaatcaaagcaata--gagaga 37514122  T
Q  245 taaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||| ||| || || ||||| |||||||| ||| ||||||||||||| |||||||    
T  37514123 taaagtaaaaacata-tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgg 37514183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 42815583 - 42815426
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaa-gaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||||| | |||||||||| |  |||||||| ||||| || || || |||| || ||||||| |  ||||||||    
T  42815583 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggtttttgcacgaaaatcaaagca--atagagag 42815486  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||||||| || ||| || ||||| |||||||| ||| ||||||||||||| |||||    
T  42815485 ataaagtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaat 42815426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 624198 - 624353
Alignment:
Q  139 agagtagtgttatttgaacatc-aatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatat-gtattggcacaaatatcaaagtaata 236  Q
    |||| ||||||||||||||| | |||||| | ||||||| | |||||||||| |||||||||||||||||  | |||||||||| || | || || |  |    
T  624198 agagaagtgttatttgaacaactaatttggt-gacaacttatttgacaaccatatttttacaaagaaaaaagtggtattggcacgaaaaccatagca--a 624294  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||  ||||| || ||||| |||||||| |||| ||||||||||    
T  624295 tagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgttgcaaaagttgt 624353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 9118751 - 9118905
Alignment:
Q  139 agagtagtgttatttgaacatc-aatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatg-tattggcacaaatatcaaagtaata 236  Q
    |||| ||||||||||||||| | |||||| | ||||||| | |||||||||| ||||| ||||||||||| ||| ||||||||| || |||| || ||||    
T  9118751 agaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatatttt-acaaagaaaaaaatggtattggcacgaaaatcatagcaata 9118848  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
      ||||||||||||||||| |||||| || ||||| |||||||  |||| ||||||||||    
T  9118849 --gagagataaagtaaaaa-ataatgtgattatgagagagaaaattgttgcaaaagttgt 9118905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 10250444 - 10250557
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | ||||||||||||||  | ||| ||||||||| | ||||| |||| |||||||  ||||||||| |||||| || ||||| ||||||||    
T  10250444 tgacaaccaaaattttacaaagaaaatgaagtagtggcacaaaaaccaaagcaatagagagaga--aagtaaaaagataatgtgagtatgagagagaaag 10250541  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  10250542 ttgtcacaaaagttgt 10250557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 34757802 - 34757915
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||| || ||||||||| |||||||  | | |||||| || ||||||||||||||||| |||| |||||||||| ||||||  |  ||||| |||     
T  34757802 tgttatttaaatatcaatttgattgacaatcacactgacaatcatatttttacaaagaaaaacatgtgttggcacaaaaatcaaatca--atagaaagag 34757899  T
Q  246 aaagtaaaaatataat 261  Q
    ||||||||||||||||    
T  34757900 aaagtaaaaatataat 34757915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 34759076 - 34759189
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||| || ||||||||| |||||||  | | |||||| || ||||||||||||||||| |||| |||||||||| ||||||  |  ||||| |||     
T  34759076 tgttatttaaatatcaatttgattgacaatcacactgacaatcatatttttacaaagaaaaacatgtgttggcacaaaaatcaaatca--atagaaagag 34759173  T
Q  246 aaagtaaaaatataat 261  Q
    ||||||||||||||||    
T  34759174 aaagtaaaaatataat 34759189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 305
Target Start/End: Original strand, 38792831 - 38792939
Alignment:
Q  192 tttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||||| ||||| |||| ||||| ||||||| |||    ||||| ||||||||||||||||| || ||||| |||||||| ||| | ||||    
T  38792831 tttttacaaagaaaagtatgtgttggtacaaaaatcaaagcaat----agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcataaaa 38792926  T
Q  292 gttgttagaaaatg 305  Q
     |||||||||||||    
T  38792927 -ttgttagaaaatg 38792939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 47288172 - 47288100
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| ||||||||||||||| |||| ||||| |||||||| ||| |||||| |||||| |||||||||    
T  47288172 atagagagaaaaagtaaaaatataacgcgagtatgagagagaaagttgtcacaaaaattgttacaaaatggtt 47288100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 296
Target Start/End: Original strand, 50890019 - 50890115
Alignment:
Q  198 caaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||   ||||||||||||| ||||||| |||| |||||||  ||| |||||||||||| || ||||| |||||||| ||| |||||||||||    
T  50890019 caaagaaaaagtggtattggcacaaaaatcaaagcaatagagagaga--aagcaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgt 50890115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 5622547 - 5622487
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || |||||||||||||| ||| |||||||||||    
T  5622547 atagagagaaaaagtaaaaagataatgtgagtatgaaagagaaagttgtcacaaaagttgt 5622487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 7632422 - 7632503
Alignment:
Q  213 attggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||| ||||||| |||| |||||||  |||||||||||||||| || |||||||||||||  | | |||||||||||    
T  7632422 attggcacaaaaatcaaagcaatagagagaga--aagtaaaaatataatgtgagtatgaaagagaaaattatcacaaaagttgt 7632503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 10474041 - 10474118
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataa 260  Q
    ||||||||| |  |||||||||||||| | |||||| |||||| |||||||||  ||||||||| |||||||||||||||    
T  10474041 tgacaaccataaatttacaaagaaaaagaagtattgacacaaaaatcaaagta--atagagagaaaaagtaaaaatataa 10474118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 278
Target Start/End: Original strand, 19232065 - 19232157
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaa 278  Q
    ||||||| | |||| |||||||||| | ||||||||||||| ||||||| |||| |||||||  |||||||||||||||| || ||||| ||||||    
T  19232065 acaaccaaaattttgcaaagaaaaaaa-gtattggcacaaaaatcaaagcaatagagagaga--aagtaaaaatataatgtgagtatgagagagaa 19232157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 296
Target Start/End: Original strand, 28458318 - 28458418
Alignment:
Q  194 tttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||| || |||||| ||| || ||||||| ||||  ||||||||||||||||| |||||| || ||||| |||||||| ||| |||||||    
T  28458318 tttacaaagaaaaagtaggtattgacacgaaaatcaaagcaata--gagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaag 28458414  T
Q  293 ttgt 296  Q
    ||||    
T  28458415 ttgt 28458418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 32696771 - 32696842
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||  | | |||||||||||||||||||||||    
T  32696771 atagagagataaagtaaaaatat-atgtgagtatgagagagaaaattatcacaaaagttgttagaaaatggtt 32696842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 37060403 - 37060335
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| || |||||||||||||| |||||||| |||||||| ||| ||||||||||| | |||||||||    
T  37060403 agagagaaggtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatggtt 37060335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 296
Target Start/End: Original strand, 336753 - 336849
Alignment:
Q  198 caaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||   ||||||||||||| ||||||| |  ||||||||| |||| ||||||| |||| |||||||| |||||||| ||| |||||| ||||    
T  336753 caaagaaaaagtggtattggcacaaaaatcaaagca--atagagagagaaagcaaaaatacaatgtgaatatgagagagaaagttgtcacaaaaattgt 336849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 305
Target Start/End: Original strand, 3078803 - 3078958
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagata 246  Q
    |||||||||||   ||||| | ||||||| | |||||||||| |  ||||||||| |||| || || ||||||| || ||||||| ||||  ||||||||    
T  3078803 ttatttgaacaatcatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaata--gagagata 3078900  T
Q  247 aagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
     |||||||| ||| || || ||||| |||||||| ||| ||||||||||||| ||||||    
T  3078901 gagtaaaaacata-tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatg 3078958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 37997394 - 37997285
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggt 282  Q
    ||||||| | ||||||||||||||  | |||||| |||||| ||||||| |  ||||||||| |||||||||| |||||| || ||||  |||||||| |    
T  37997394 acaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagca--atagagagagaaagtaaaaagataatgtgagtatg--agagaaagtt 37997299  T
Q  283 gttacaaaagttgt 296  Q
    || |||||||||||    
T  37997298 gtcacaaaagttgt 37997285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 50721727 - 50721786
Alignment:
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||| ||||||||||||||||| || |||||||||||||| | | |||||||||||    
T  50721727 tagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttatcacaaaagttgt 50721786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 12138983 - 12138916
Alignment:
Q  194 tttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatg 262  Q
    |||||||||||||| || ||||| ||||||| ||||||||||||  ||||||||||||||||| ||||||    
T  12138983 tttacaaagaaaaagtaggtatttgcacaaaaatcaaagtaata--gagagataaagtaaaaaaataatg 12138916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 23369219 - 23369374
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| || |   ||||||||    ||||||||| | | |||||||| |||  | ||| ||||||||| | ||||| ||||      
T  23369219 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata-- 23369316  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||| |||||| || || || |||||||| ||| |||||||||||    
T  23369317 gagagataaagtaaaaagataatgtgagtaagagagagaaagttgtcacaaaagttgt 23369374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 296
Target Start/End: Original strand, 38338873 - 38338963
Alignment:
Q  203 aaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||| ||||| ||||||| ||||||| ||||  |||||||||||||||||  ||||| || ||||| |||||||| ||| |||||||||||    
T  38338873 aaaaataggtatttgcacaaaaatcaaagcaata--gagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgtcacaaaagttgt 38338963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 30079935 - 30079876
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  30079935 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 30079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 30170002 - 30170061
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  30170002 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgt 30170061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 40428039 - 40427972
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||  ||| ||||||||||||| |||||    
T  40428039 atagagagataaagtaaaaa-ataatgtgaatataaaatagaaaattgtcacaaaagttgttataaaat 40427972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 51908556 - 51908600
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||    
T  51908556 atagagagaaaaagtaaaaagataatgtgaatatgaaagagaaag 51908600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 39654953 - 39654847
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcga--atatgaaagagaaaggtgttacaaaa 291  Q
    |||||||||||||  | |||||| |||||| ||||||| |||| ||||||| | |||||| | |||||| ||   ||||||| |||||| ||| ||||||    
T  39654953 tttacaaagaaaatgaggtattgacacaaaaatcaaagcaatagagagagagatagtaaagacataatgtgagtgtatgaaaaagaaagttgtcacaaaa 39654854  T
Q  292 gttgtta 298  Q
    |||||||    
T  39654853 gttgtta 39654847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 2268489 - 2268551
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtta 298  Q
    ||||| ||| |||||||||| |||||| || ||||| |||||||| ||| |||||||||||||    
T  2268489 atagaaagaaaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgtta 2268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 2999201 - 2999132
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| |||||| |||||||||||| || | ||| |||||| |||| | |||||||    
T  2999201 atagagagataaagtaaaaa-ataatgtgaatatgaaagataatgttgtcacaaaaattgtcataaaatgg 2999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 6520817 - 6520871
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    ||||| |||||||||| |||||| || ||||| |||||||| |||||||||||||    
T  6520817 agagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagtt 6520871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 280
Target Start/End: Original strand, 12387596 - 12387691
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||| || |||||||||||||  | |||||| |||||| ||||||  |||| ||||| |  |||||||||||||||| || |||||| |||||||    
T  12387596 acaaccatatatttacaaagaaaatgaggtattgacacaaaaatcaaaacaataaagagaca--aagtaaaaatataatgtgattatgaaggagaaag 12387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 21617272 - 21617203
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||| |||||| |||| | |||||||    
T  21617272 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaatgg 21617203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 26910310 - 26910231
Alignment:
Q  215 tggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| ||||||| |||| |||||||  ||||||||| |||||  ||||| || |||||||| ||| |||||||||||    
T  26910310 tggcacaaaaatcaaagcaatagagagaga--aagtaaaaaaataatatgaatacgagagagaaagttgtcacaaaagttgt 26910231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 36111377 - 36111439
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgtta 298  Q
    ||||||||||||||||||||  ||||| || ||||| ||| |||| |||| ||||||||||||    
T  36111377 atagagagataaagtaaaaaagtaatgtgagtatgagagataaagttgttgcaaaagttgtta 36111439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 296
Target Start/End: Complemental strand, 52895404 - 52895257
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaa-atatgtattggcacaaatatcaaagtaatatagagagata 246  Q
    ||||||||||| | ||||| ||||||||| | ||||||||||    |||||||||||||  ||  ||||| ||| || ||||||| |  |||||||||||    
T  52895404 ttatttgaacaaccatttgattgacaactcatttgacaaccatggatttacaaagaaaatgtagatattgacacgaaaatcaaagca--atagagagata 52895307  T
Q  247 aagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    || |||||| |||||| || ||||| ||| |||| ||| |||||| ||||    
T  52895306 aaataaaaacataatgtgattatgagagataaagttgtcacaaaaattgt 52895257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 13086111 - 13086043
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||||||| ||||||  ||||| || ||||| |||||||| ||||||||||||||| | ||||||    
T  13086111 atagagagataaaataaaaag-taatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatg 13086043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 21392656 - 21392591
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||||||||||||| |||||   |||||||||||||||| ||| |||||| || ||| ||||||    
T  21392656 agagataaagtaaaaacataatataaatatgaaagagaaagctgtcacaaaaattattacaaaatg 21392591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 41678852 - 41678893
Alignment:
Q  232 taatatagagagataaagtaaaaatataatgcgaatatgaaa 273  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||    
T  41678852 taatatagagagataaaataagaatataatgtgaatatgaaa 41678893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 50608584 - 50608650
Alignment:
Q  212 tattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||| |||||| |||||||||||| ||||||   ||||||||| |||||| || ||||||||||||||    
T  50608584 tattgacacaaaaatcaaagtaatagagagagg--aagtaaaaaaataatgtgagtatgaaagagaaag 50608650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 1627487 - 1627584
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| |  |||||||||||||  | ||||||||||||| | ||||| |  | ||||||  |||||||||| ||||||||| ||||| ||||||||    
T  1627487 tgacaaccataaatttacaaagaaaatgaggtattggcacaaaaaccaaagca--acagagagggaaagtaaaaacataatgcgagtatgagagagaaag 1627584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 1799539 - 1799607
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| |||||  ||||| |||||||||| ||||| |||| || | | |||||||||    
T  1799539 agagataaagtaaaaatgtaatgtaaatataaaagagaaagttgttataaaaattatcaaaaaatggtt 1799607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 308
Target Start/End: Complemental strand, 34995499 - 34995338
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    ||||||||||||||   ||||| |||| ||||  |  |||||||| |  |||| ||||||||||| |||||| |||  | | |||||||||| |||| ||    
T  34995499 gtgttatttgaacaatcatttgtttgataactttagggacaaccataaatttataaagaaaaataggtattgacacggaaaccaaagtaatagagagtga 34995400  T
Q  245 taaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
      ||||||||| |||| | || ||| | ||| |||| ||| ||||||||||||| |||||||||    
T  34995399 --aagtaaaaacataaggtgagtataagagaaaaagatgtcacaaaagttgttacaaaatggtt 34995338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 37297138 - 37297078
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||  ||| |||||||||||    
T  37297138 atagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgt 37297078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 42491257 - 42491161
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaata 236  Q
    |||| |||||||||||||| | ||||| |||||||||     |||||||| | ||| ||||||||||| | ||||||||||||| | ||||| ||||    
T  42491257 gagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataatttcacaaagaaaaagaggtattggcacaaaaaccaaagcaata 42491161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 43175073 - 43175013
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||| | | |||||||||||    
T  43175073 atagagagagaaagtaaaaaaataatgtgagtatgagagagaaagttatcacaaaagttgt 43175013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 46405956 - 46406015
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||| ||||| || ||||| ||| |||| |||| ||||||||||    
T  46405956 atagagagataaagtaaaaat-taatgtgagtatgagagaaaaagttgttgcaaaagttgt 46406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 46634230 - 46634129
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||| |||  | ||| || |||||| |||||||||||| | |||||  ||||||||| |||||| || ||||| ||| |||| ||| |||||||    
T  46634230 ttttacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagaaagaga--aagtaaaaagataatgtgagtatgagagataaagttgtcacaaaag 46634133  T
Q  293 ttgt 296  Q
    ||||    
T  46634132 ttgt 46634129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 51255877 - 51255764
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||  ||  || ||||||||| ||||||| |||| |||||||  ||||| ||  || ||| || ||||| |||||||| ||| |||||||    
T  51255877 ttttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagaga--aagtagaataatcatgtgagtatgagagagaaagttgtcacaaaag 51255780  T
Q  293 ttgttagaaaatggtt 308  Q
    |||| | |||||||||    
T  51255779 ttgtcaaaaaatggtt 51255764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 51573614 - 51573657
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||||||||||||||||| |||||| || ||||||||||||||    
T  51573614 atagagagataaagtaaaaa-ataatgtgagtatgaaagagaaag 51573657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 53654735 - 53654786
Alignment:
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||||||| |||||  ||||||||||||||||| ||| ||||||    
T  53654735 gagagataaagtaaaaa-ataatatgaatatgaaagagaaagttgtcacaaaa 53654786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 140 - 308
Target Start/End: Complemental strand, 12681 - 12515
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||    
T  12681 gagtagagttatttgaacatcaatttgcttgacaactaaatggacaaccacatttttaccaagaaaagtatgtattggcacaaatatcaaagta--atag 12584  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| ||||||||||||||||  || ||| | |||||||| ||| |||||| ||||||||||||||||    
T  12583 agagagaaagtaaaaatataatatgagtataagagagaaagttgtcacaaaaattgttagaaaatggtt 12515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 139 - 308
Target Start/End: Original strand, 12784283 - 12784452
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||| ||| |||||||||||| |    
T  12784283 agagtagtgttatttgaacatctatttgcttgacaactaaatagacaaccatgtttttacaaagaaaaatatgcattggcataaaaatcaaagtaataga 12784382  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| ||||||||||||||| | || ||||| |||||||| ||| |||||| || ||| |||||||||    
T  12784383 gagagagaaagtaaaaatataacgtgagtatgagagagaaagttgtcacaaaaattattataaaatggtt 12784452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 139 - 280
Target Start/End: Complemental strand, 45420320 - 45420181
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  45420320 agagtagtgttatttgaacatcaatttatttgacaactaaatagacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagta--ata 45420223  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||| | |||||||||||||| || || ||||| | ||||||    
T  45420222 gagaaagaaagtaaaaatatattgtgagtatgagatagaaag 45420181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 3771557 - 3771417
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||||||||  ||    
T  3771557 tagagtagtgttatttgaacgtcaatttgcttgacaactaaatggacaaccacatttttacaaagaaaagtacgtattgacacaaatatcaaagta--at 3771460  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||| ||||| |||||| |||| || ||||| ||| ||||    
T  3771459 agagagagaaagtgaaaataaaatgtgactatgagagataaag 3771417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 143 - 304
Target Start/End: Complemental strand, 4657482 - 4657323
Alignment:
Q  143 tagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagaga 242  Q
    |||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| | |||||||||| |||||||||||||  |||||||    
T  4657482 tagtattatttgaacatcaatttgcttgacaaccaaatggacaatcacatttttacaaagaaaattgtgtattggcataaatatcaaagta--atagaga 4657385  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    || ||||||||||||||||| |||||| | ||| |||  ||| |||||| || |||||||||    
T  4657384 gagaaagtaaaaatataatgtgaatataagagaaaaaattgtcacaaaaattattagaaaat 4657323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 139 - 308
Target Start/End: Complemental strand, 29449395 - 29449229
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||||||||||||| |||| ||| ||||||| |||||||||||| |    
T  29449395 agagtagtgttatttgaacatctatttgcttgacaaccaaatagacaac-atgtttttacaaagaaaagtatgcatttgcacaaaaatcaaagtaataga 29449297  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||  |||||||||||||||| || ||||| |||||||| ||| | ||||||||||| |||||||||    
T  29449296 gagaga--aagtaaaaatataatgtgagtatgagagagaaagttgtcataaaagttgttataaaatggtt 29449229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 42532632 - 42532792
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||| |||||||||||||| |||| ||| || |  |||||| |||||||||||||||||||||| || |||||||||  ||||||||||    
T  42532632 tgttatttgaacatctatttgcttgacaaccaaatagactactatgtttttataaagaaaaatatgtattggcacgaaaatcaaagta--atagagagat 42532729  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||||| | |||||| ||| ||||||||| ||| |||||||||    
T  42532730 aaagtaaaaatataatgtgagtatgagaaagaaagttgtcacaaaagttattataaaatggtt 42532792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 139 - 291
Target Start/End: Complemental strand, 40700380 - 40700230
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||| ||  |||||| ||| |||||||| ||||| ||| || |||||||||  |||    
T  40700380 agagtagtgttatttgaacatctatttgcttgacaaccaaatagacaatcatgtttttataaaaaaaaatatatattgacacgaaaatcaaagta--ata 40700283  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    |||||||||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  40700282 gagagataaagtaaaaatataatgtgagtatgagagagaaagttgttataaaa 40700230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 17999564 - 17999678
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||||   ||||||||||||||||||||||||||||| || |||||||||  |||    
T  17999564 agagtagtgttatttgaacatctatttgtttgacaactaaatagacaaccttgtttttacaaagaaaaatatgtattggcacgaaaatcaaagta--ata 17999661  T
Q  239 gagagataaagtaaaaa 255  Q
    |||||||||| ||||||    
T  17999662 gagagataaaataaaaa 17999678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 1040697 - 1040568
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||||||||||||||||||| |||||||||||||  |||| ||||| ||| ||||||||||||||| |||||||||||||||| |||||||||  ||||    
T  1040697 gagtagtgttatttgaacatctatttgcttgacaatcaaatagacaatcacgtttttacaaagaaaagtatgtattggcacaaaaatcaaagta--atag 1040600  T
Q  240 agagataaagtaaaaatataatgcgaatatga 271  Q
    | ||| ||| ||||||||||||| || |||||    
T  1040599 aaagagaaaataaaaatataatgtgagtatga 1040568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 19843662 - 19843506
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||  | ||||||||  | |||||||||||||||| ||||| |||||||||| ||||||| |  |||||||||     
T  19843662 tgttatttgaacatcaatttggttgacaatcatattgacaattatatttttacaaagaaaagtatgtgttggcacaaaaatcaaagca--atagagagag 19843565  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||| |||||||||||  || ||||| |||||||| ||| |||||||||||||| ||||    
T  19843564 aaaggaaaaatataatctgagtatgagagagaaagttgtcacaaaagttgttaggaaat 19843506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 21738511 - 21738669
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||| |||||||||| | ||||| |||     || |     
T  21738511 tgttatttgaacatcaatttggttgacaacgacattgacaatcatatttttacaaagaaaaatatgtgttggcacaaaaaccaaagcaat----tgaaag 21738606  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||||| |||||||  | | |||||| || |||||||||||||    
T  21738607 aaagtaaaaatataatgtgagtatgagagagaaaattatcacaaaaattattagaaaatggtt 21738669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 18737800 - 18737925
Alignment:
Q  179 attgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaa 278  Q
    ||||||||||| ||||||| |||||||| ||||| |||||||||| ||||||  |||| ||| |||  |||||||||||||||| |||||||| ||||||    
T  18737800 attgacaaccatatttttataaagaaaagtatgtgttggcacaaaaatcaaaacaataaagaaaga--aagtaaaaatataatgtgaatatgagagagaa 18737897  T
Q  279 aggtgttacaaaagttgttagaaaatgg 306  Q
    || ||| ||||||||||||| |||||||    
T  18737898 agttgtcacaaaagttgttaaaaaatgg 18737925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 280
Target Start/End: Original strand, 7084608 - 7084740
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| | |||||||| || |||||||||||||||| ||||| |||| ||||| ||||||| |  ||||| |||     
T  7084608 tgttatttgaacatcaatttggttgacaaccacattgacaatcatatttttacaaagaaaagtatgtgttggtacaaaaatcaaagca--atagaaagag 7084705  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||||||||||  || ||||| ||||||||    
T  7084706 aaagtaaaaatataatatgagtatgagagagaaag 7084740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 33616611 - 33616493
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| ||||| |||| ||||| ||||||| |||| ||||||| ||||||||||||||||  |||||||| |||||||    
T  33616611 ttgacaaccatatttttacaaagaaaagtatgtgttggtacaaaaatcaaagcaatagagagagagaaagtaaaaatataatatgaatatgagagagaaa 33616512  T
Q  280 ggtgttacaaaagttgtta 298  Q
    | | | |||||| ||||||    
T  33616511 gttatcacaaaatttgtta 33616493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 12071025 - 12070870
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||||| || |||||||| | || ||||||||  |||||||||||||||  |||||||| ||| || ||||||| |  ||||| |||     
T  12071025 tgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatgtattgacacgaaaatcaaagca--atagaaagag 12070928  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||||||||||| | |||||  |||||||| ||| |||||| |||||||||||||    
T  12070927 aaagtaaaaatataatgtggatatg--agagaaagttgtcacaaaaattgttagaaaatg 12070870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 36774682 - 36774558
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| ||||||| |||||||| ||| |||| | || || ||||||| |||| |||||||  |||||||||||||||| |||||||| |||||||    
T  36774682 ttgacaaccatatttttataaagaaaagtatctattagtactaaaatcaaagcaatagagagaga--aagtaaaaatataatgtgaatatgagagagaaa 36774585  T
Q  280 ggtgttacaaaagttgttagaaaatgg 306  Q
    | |||  ||||||||||||||||||||    
T  36774584 gttgtctcaaaagttgttagaaaatgg 36774558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 304
Target Start/End: Complemental strand, 14328566 - 14328403
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||| |||||||||||||||||| | || |||||||| | || |||||  | |||||||| |||||||  |||||||| ||| || ||||||| || | |    
T  14328566 agagcagtgttatttgaacatcattgtgattgacaaccacatggacaattatatttttactaagaaaatcatgtattgacacgaaaatcaaagcaacaga 14328467  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    ||||||  |||||||||||||||| || ||||| ||| |||| ||| |||||||||||||||||||    
T  14328466 gagaga--aagtaaaaatataatgtgagtatgagagaaaaagttgtcacaaaagttgttagaaaat 14328403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 6336394 - 6336270
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | |||||  ||    ||||| ||| ||||||||||||  || ||||| |||||||    
T  6336394 ttgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaaccaaagcgat----agagagaaaataaaaatataatatgagtatgagagagaaa 6336299  T
Q  280 ggtgttacaaaagttgttagaaaatggtt 308  Q
    | ||| |||||||||||||||||||||||    
T  6336298 gttgtcacaaaagttgttagaaaatggtt 6336270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 308
Target Start/End: Complemental strand, 5032102 - 5031941
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| |  |||| | ||||||| | |||||||||| |  |||||||||||||| || || || |||||||||||||||||  ||||||||    
T  5032102 gtgttatttgaacaaccttttgatagacaacttatttgacaaccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagta--atagagag 5032005  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||| |||| || ||| || ||||| |||||||| |||  |||||||||||| |||||||||    
T  5032004 ataaagtgaaaacat-atgtgagtatgagagagaaagttgtcgcaaaagttgttacaaaatggtt 5031941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 26290744 - 26290832
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaa 234  Q
    ||||||||||||||||||||| |||| ||||| |||||||| || |||||||||||||||||||||| |||  ||||| | ||||||||    
T  26290744 tgttatttgaacatcaatttggttgataactacattgacaatcatatttttacaaagaaaaatatgtgttgttacaaaaaccaaagtaa 26290832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 43658605 - 43658688
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaa 229  Q
    |||||||||||||| |||||| |||||||| | ||||||||| |  ||||||||||||||| |||||||| ||||||| |||||    
T  43658605 tgttatttgaacattaatttggttgacaaccatattgacaactatttttttacaaagaaaagtatgtattagcacaaaaatcaa 43658688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 40599208 - 40599331
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    ||||||| || ||||||||||| |||||||||  |||||||||| | ||||| |||||||||||  ||||||||||||||| | || ||||  |||||||    
T  40599208 ttgacaatcatatttttacaaaaaaaaatatg--ttggcacaaaaaccaaagcaatatagagag--aaagtaaaaatataacgtgagtatg-gagagaaa 40599302  T
Q  280 ggtgttacaaaagttgttagaaaatggtt 308  Q
    | ||| |||||| ||||||| ||||||||    
T  40599303 gttgtcacaaaaattgttaggaaatggtt 40599331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 306
Target Start/End: Complemental strand, 15270045 - 15269881
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatat 237  Q
    |||| ||||||||||||||||| ||||| |||| ||||    ||| ||||| | ||| ||||||||||| || ||||| |||| || ||||||| ||||     
T  15270045 agaggagtgttatttgaacatccatttggttgataacttttatgataaccataattt-acaaagaaaaagtaggtatttgcacgaaaatcaaagcaata- 15269948  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
     |||||||||||||||||  ||||| ||||||||||||||||| ||| |||||| |||| | |||||||    
T  15269947 -gagagataaagtaaaaag-taatgtgaatatgaaagagaaagttgtcacaaaaattgtcataaaatgg 15269881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 221
Target Start/End: Complemental strand, 4319892 - 4319809
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcaca 221  Q
    ||||||||||||||||||||||| |||| |||||||| ||||| ||||  ||  |||||| |||||||| ||||||||| ||||    
T  4319892 tagagtagtgttatttgaacatctatttacttgacaattaaatagacagtcatgtttttataaagaaaattatgtattgacaca 4319809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 28245857 - 28245758
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagt 293  Q
    |||||||||||||||| ||||| |||| || | ||||| ||||  ||||||||||||||||| |||||| || ||||| |||||||| ||| ||||||||    
T  28245857 tttacaaagaaaaataggtatttgcacgaaaaccaaagcaata--gagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagt 28245761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 304
Target Start/End: Original strand, 36190907 - 36191071
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgac-aaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||||||||||||||||||| ||||| |||| ||  ||||  || |||||  |||||||||||||||  || |||||  |  || || ||||||  ||    
T  36190907 agagtagtgttatttgaacatctatttgtttgataatcaaataaacaaaccatgtttttacaaagaaaagcatctattgatatgaaaattaaagta--at 36191004  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    |||||||||||||||||||||||||  | ||||| |||||||| ||| | ||||||| ||| |||||    
T  36191005 agagagataaagtaaaaatataatggaagtatgagagagaaagttgtcataaaagttattataaaat 36191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 39147895 - 39147795
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagt 293  Q
    |||||||| ||||  | |||||| |||||| ||||||  |||| | |||||  ||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  39147895 tttacaaaaaaaatgaggtattgacacaaaaatcaaaacaatacaaagaga--aagtaaaaacataatgtgaatatgaaagagaaagttgttacaaaagt 39147798  T
Q  294 tgt 296  Q
    |||    
T  39147797 tgt 39147795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 10472098 - 10472184
Alignment:
Q  203 aaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    |||||||||||||||||  || | |||||||||| |||||||  |||||||||||||||| || ||||| |||||||| ||||| ||||    
T  10472098 aaaaatatgtattggcatgaaaaacaaagtaatagagagaga--aagtaaaaatataatgtgagtatgagagagaaagttgttagaaaa 10472184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 29349636 - 29349538
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    ||||||||||||||  |||||| |||||||| |||||||||  | ||||||| || ||||||| |||||| |||| ||| |||||||| ||| |||||||    
T  29349636 ttttacaaagaaaataatgtatcggcacaaaaatcaaagta--acagagagaaaaggtaaaaacataatgtgaatgtgagagagaaagttgtcacaaaag 29349539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 36803013 - 36802916
Alignment:
Q  206 aatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||| ||||| ||||||| |||||||||  |||||||||||||||||||| |||||| || ||||| |||||||| |||  |||||||||| | ||||||    
T  36803013 aataggtatttgcacaaaaatcaaagta--atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaatg 36802917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 9207732 - 9207619
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | |||||||||| |||  | ||| ||||||||| | ||||| |||| |||||||  ||||||||| |||||| || ||||| ||||||||    
T  9207732 tgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagaga--aagtaaaaaaataatgtgagtatgagagagaaag 9207635  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  9207634 ttgtcacaaaagttgt 9207619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 16799815 - 16799692
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| || || || ||||||| ||||| | ||   ||||||| ||| ||||||||||||  || ||||| |||||||    
T  16799815 ttgacaaccatatttttacaaagaaaagtacgtgttagcacaaaaatcaaggaaa---agagagagaaaataaaaatataatatgagtatgagagagaaa 16799719  T
Q  280 ggtgttacaaaagttgttagaaaatgg 306  Q
    | | | |||||| ||||||| ||||||    
T  16799718 gttatcacaaaaattgttaggaaatgg 16799692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 27490616 - 27490772
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||| |||||||||||||||| ||||   ||||||||    |||||| || | ||||||||||||||  |||||||  |||||| ||||||| |  ||    
T  27490616 tagagttgtgttatttgaacatccattttgatgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaacacaaaaatcaaagca--at 27490713  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||| ||| |||||| |||||  || | ||| |||||||| ||| |||||||||||    
T  27490714 agagagagaaattaaaaacataatatgagtgtgagagagaaagttgtcacaaaagttgt 27490772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 37966724 - 37966603
Alignment:
Q  183 acaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggt 282  Q
    ||||||| ||| ||| |||||||| |||||||| | | ||| ||  ||||||||  |||||| ||||||||||||||||| || |||||||||||||  |    
T  37966724 acaaccatattattataaagaaaagtatgtatttgtataaaaatttaagtaata--gagagaaaaagtaaaaatataatgtgagtatgaaagagaaaatt 37966627  T
Q  283 gttacaaaagttgttagaaaatggtt 308  Q
    ||  |||||||||||  |||||||||    
T  37966626 gt--caaaagttgttttaaaatggtt 37966603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 45259216 - 45259336
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    ||||||| || |||||||||||||||| ||||| |||| ||||| ||||||| |||| ||||      ||||||||||||| | || ||||| | | |||    
T  45259216 ttgacaaacatatttttacaaagaaaagtatgtgttggtacaaaaatcaaagcaatagagag------agtaaaaatataacgtgagtatgagataaaaa 45259309  T
Q  280 ggtgttacaaaagttgttagaaaatgg 306  Q
    | ||| |||||| ||||||||||||||    
T  45259310 gttgtcacaaaaattgttagaaaatgg 45259336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 4758621 - 4758678
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||| |||| ||||||||    
T  4758621 atagagagataaaataaaaa-ataatgtgaatatgaaagagaaagttgttgcaaaagtt 4758678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 18254096 - 18254251
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    ||||| |||||||||||||||| || |   ||||||||    ||||||||| | |||||||||| |||  |  || ||||||||| | ||||| |||| |    
T  18254096 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaataga 18254195  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||  ||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  18254196 gagaga--aagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 18254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 39449099 - 39449168
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| || ||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  39449099 atagagagataaagtaaaaa-atgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatgg 39449168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 291
Target Start/End: Original strand, 4138101 - 4138222
Alignment:
Q  167 cttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaa 266  Q
    ||||||||| |||| |||||| | || ||||||||||||| ||| ||||||||| || |  ||||||  ||||||| | ||||||||| ||||||| ||     
T  4138101 cttgacaaccaaatggacaacaatatatttacaaagaaaagtat-tattggcaccaaaactaaagta--atagagacagaaagtaaaattataatgtgag 4138197  T
Q  267 tatgaaagagaaaggtgttacaaaa 291  Q
    ||||| |||||||| ||||| ||||    
T  4138198 tatgagagagaaagttgttagaaaa 4138222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 34134663 - 34134824
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaa-gaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||||| | |||||||||| |  |||||||| ||| | || || ||| ||| || ||||||| |  ||||||||    
T  34134663 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaagagtaggttttgacacgaaaatcaaagca--atagagag 34134760  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||| || |||  | ||||| |||||||| ||| | ||||||||||| |||||||||    
T  34134761 ataaagtaaaaacat-atgtcagtatgagagagaaagttgtcagaaaagttgttacaaaatggtt 34134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 38560767 - 38560699
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||||||||||||||||| |||||| || ||||| | |||||| ||| ||||||||||||| ||||||    
T  38560767 atagagagataaagtaaaaa-ataatgtgagtatgacaaagaaagttgtaacaaaagttgttacaaaatg 38560699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 1352478 - 1352434
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||    
T  1352478 atagagaaataaagtaaaaatataatgtgagtatgaaagagaaag 1352434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 4952420 - 4952516
Alignment:
Q  193 ttttacaaagaaaaatat-gtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||||| || |||||||||| || | || || ||||  ||||||||||||||||| |||||| |||||||||| |||||| |||| |||||    
T  4952420 ttttacaaagaaaaaaattgtattggcacgaaaaccatagcaata--gagagataaagtaaaaa-ataatgtgaatatgaaatagaaagttgttgcaaaa 4952516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 291
Target Start/End: Original strand, 23352794 - 23352941
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatat 237  Q
    |||| ||||||||||||||| | ||||| ||||||||| |   |||||||| |  |||||||||||||| |||||||| |||| || | ||||| |||      
T  23352794 agaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccata-atttacaaagaaaaagtatgtatttgcacgaaaaccaaagcaat-- 23352890  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
      |||||||||||||||| |||||| || ||||| |||||||| ||| ||||||    
T  23352891 --agagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaa 23352941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 28679406 - 28679346
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||||||||| |  ||||| |||||||| |||  ||||||||||    
T  28679406 atagagagataaagtaaaaatataatgtgtgtatgagagagaaagttgtcgcaaaagttgt 28679346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 40357973 - 40358049
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtatt 215  Q
    |||||||| ||||||  ||||||||||  |||||||  |||| ||||| || |||||||||||||||| ||||||||    
T  40357973 agagtagtattatttacacatcaatttatttgacaatcaaatagacaatcatatttttacaaagaaaattatgtatt 40358049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 41042343 - 41042272
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| |||||||||| |||||| || ||||| ||| |||| ||| ||||||||||||| |||||||||    
T  41042343 atagagagagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaagttgtta-aaaatggtt 41042272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 44977481 - 44977541
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| ||||||  ||||||| |||||||  |||||||||||||||    
T  44977481 atagagagagaaagtaaaaacataatgtaaatatgagagagaaaattgttacaaaagttgt 44977541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 296
Target Start/End: Complemental strand, 18177119 - 18176970
Alignment:
Q  144 agtgttatttgaaca-tcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatg-tattggcacaaatatcaaagtaatatagag 241  Q
    ||||||||||||||| |||||||| | ||||||| | |||||||||| ||||| |||||||||||  || |||||||||  | | || || ||||  |||    
T  18177119 agtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatatttt-acaaagaaaaaagtgatattggcacggaaaccatagcaata--gag 18177024  T
Q  242 agataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||| ||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  18177023 agataaag-aaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 18176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 18876903 - 18876958
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    |||||||||||||||||||| || ||| |||||||| |||||||| ||| ||||||    
T  18876903 atagagagataaagtaaaaaaattatgtgaatatgagagagaaagttgtcacaaaa 18876958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 6999050 - 6999119
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| ||||||||||| | |||||||    
T  6999050 atagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgg 6999119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 296
Target Start/End: Complemental strand, 7574555 - 7574465
Alignment:
Q  203 aaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||| ||||| |||| || ||||||||||||  ||||||||||||||||| ||| || || ||||||||| |||| |||  ||||||||||    
T  7574555 aaaaataggtatttgcacgaaaatcaaagtaata--gagagataaagtaaaaa-atattgtgagtatgaaagaaaaagttgtctcaaaagttgt 7574465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 22525980 - 22526045
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||| |||||| |||||| |||||||||| ||| |||||| |||| | |||||||    
T  22525980 agagataaagtaaaaa-ataatgtgaatataaaagagaaagttgtcacaaaaattgtcaaaaaatgg 22526045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 296
Target Start/End: Original strand, 23690396 - 23690551
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||| |||||||||||||| ||||||| | |||||||     |||||||| |||||||||||| |||| | |||||| |||||| | ||||  |  ||||    
T  23690396 gagttgtgttatttgaacaccaatttgatagacaacttttaagacaaccatatttttacaaaggaaaagaggtattgacacaaaaaccaaa--acaatag 23690493  T
Q  240 agagataaagt-aaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    || || ||||| ||||| |||||| || ||||| |||||||| ||| | |||||||||    
T  23690494 agtgagaaagtaaaaaacataatgtgagtatgagagagaaagttgtcataaaagttgt 23690551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 6742396 - 6742460
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||| ||||||| || |||||| ||||||||||||||||| |||| |||||||||| | ||||||    
T  6742396 agagagaaagtaagaagataatgtgaatatgaaagagaaagttgtt-caaaagttgtcacaaaatg 6742460  T

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Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 18982996 - 18982951
Alignment:
Q  168 ttgacaactaaattgacaaccacatttttacaaagaaaaatatgta 213  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||    
T  18982996 ttgacaaccaaatggacaaccatatttttacaaagaaaagtatgta 18982951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 24766239 - 24766170
Alignment:
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||| ||||||||||||||||| || ||||  ||| |||| ||| ||||||||| ||| |||||||||    
T  24766239 gagagagaaagtaaaaatataatgtgagtatgcgagataaagttgtcacaaaagttattaaaaaatggtt 24766170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 297
Target Start/End: Complemental strand, 28495002 - 28494888
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| |  |||||| |||||| || |||||| |||||| | |||| |||| |||||||| ||  |||||| |||||  || | ||||||||||||    
T  28495002 tgacaaccataaatttacacagaaaattaggtattgacacaaaaaccaaaataatttagagagaaaa--taaaaacataatatgagtgtgaaagagaaag 28494905  T
Q  281 gtgttacaaaagttgtt 297  Q
     |||| |||||||||||    
T  28494904 ttgttccaaaagttgtt 28494888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 36644063 - 36644116
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||| |||||| |||||| || |||||||||||||| ||| ||||||    
T  36644063 agagagataaattaaaaaaataatgtgagtatgaaagagaaagttgtaacaaaa 36644116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 39213752 - 39213820
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||||||||||||||||| |||||| || ||||| ||| |||| |||| |||||||||| | ||||||    
T  39213752 atagagagataaagtaaaaa-ataatgtgagtatgagagataaagttgttgcaaaagttgtcacaaaatg 39213820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 40635804 - 40635735
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttac-aaaagttgttagaaaat 304  Q
    ||||||| | |||||| |||||||||  || |||||||||||||| |||||| ||||||||||| |||||    
T  40635804 atagagaaagaaagtagaaatataatatgagtatgaaagagaaagttgttacaaaaagttgttaaaaaat 40635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 2841921 - 2841854
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||| |||||| || ||||| | |||||| ||| ||||||||||| | |||||||    
T  2841921 agagagataaagtaaaaa-ataatgtgagtatgagaaagaaagttgtaacaaaagttgtcacaaaatgg 2841854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 6639474 - 6639525
Alignment:
Q  256 tataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||| || ||||| |||||||| ||||| |||||||||||||||||||||    
T  6639474 tataatgtgagtatgagagagaaagttgtta-aaaagttgttagaaaatggtt 6639525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 7663995 - 7664072
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataa 260  Q
    ||||||||| |  |||||||||||||| | |||||| |||||| | ||||| |  ||||||||| |||||||||||||||    
T  7663995 tgacaaccataaatttacaaagaaaaagaggtattgacacaaaaaccaaagca--atagagagagaaagtaaaaatataa 7664072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 9990780 - 9990720
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||| |||||| || ||| | |||||||| ||| |||||||||||    
T  9990780 atagagagagaaagtaaaaagataatgtgagtataagagagaaagttgtcacaaaagttgt 9990720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 37085217 - 37085257
Alignment:
Q  250 taaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    ||||||||||||  ||||||||||||||||| |||||||||    
T  37085217 taaaaatataatatgaatatgaaagagaaagttgttacaaa 37085257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 39309586 - 39309518
Alignment:
Q  147 gttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtatt 215  Q
    |||||||||| ||||||||| |||||||  | ||||| || || |||||||||||||||| ||| ||||    
T  39309586 gttatttgaaaatcaatttggttgacaatcatattgataatcatatttttacaaagaaaagtatatatt 39309518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 42372569 - 42372525
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||||||||||||||||| |||||| || ||||| ||||||||    
T  42372569 atagagagataaagtaaaaaaataatgtgagtatgagagagaaag 42372525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 44254684 - 44254629
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||| ||||| ||| ||||| |||||||| ||| |||||||||||    
T  44254684 agagataaagtaaaaa-ataatacgagtatgagagagaaagttgtaacaaaagttgt 44254629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 35822868 - 35823026
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    ||||||||||||||||||||| |||||||| |  |||||||||| ||||||||||||||||||||||||||||||||| ||||||| |  |||||||||     
T  35822868 tgttatttgaacatcaatttggttgacaaccacgttgacaaccatatttttacaaagaaaaatatgtattggcacaaaaatcaaagca--atagagagag 35822965  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| | ||| |||||||| ||| | |||| ||||||||||||||    
T  35822966 aaagtaaaaatataatgcgagtgtgagagagaaagttgtcataaaaattgttagaaaatgg 35823026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 149 - 304
Target Start/End: Original strand, 44496699 - 44496852
Alignment:
Q  149 tatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaa 248  Q
    |||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| ||  ||||  ||| |||    
T  44496699 tatttgaacatcaatttgtttgacaattaaatggacaaccatatttttacaaagaaaattatgtattggcacaaatatcaaaata--atagcaagagaaa 44496796  T
Q  249 gtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
     ||| ||||||||| || ||||| |||||||| ||| |||||| ||||||||||||    
T  44496797 ataataatataatgtgagtatgagagagaaagttgtcacaaaaattgttagaaaat 44496852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 42584980 - 42584820
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||||| || |||||||| | || ||||||||  |||||||||||||||  || ||||| ||| |  ||||||| ||||  |||||||    
T  42584980 tgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatctattgacacgagaatcaaagcaata--gagagat 42584883  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||||| |||||||| ||| |||||||||||||||||||||||    
T  42584882 aaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggtt 42584820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 31398308 - 31398153
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    ||||||||||||||||||||  ||||| |||||||| |||| |||||||   ||||||||||||||||||||||||||||| || |||||||||||| ||    
T  31398308 gagtagtgttatttgaacatttatttgtttgacaaccaaatagacaaccttgtttttacaaagaaaaatatgtattggcacgaaaatcaaagtaatagag 31398209  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||| |||  |||||| ||||| || ||||| |||||||| | | |||||||||||    
T  31398208 agaga-aaataaaaaatgtaatgtgagtatgagagagaaagttatcacaaaagttgt 31398153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 40854582 - 40854706
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||| |||| |||||||  |||||||||||||||| || ||||| |||||||    
T  40854582 ttgacaaccatatttttacaaagaaaagtatgtgttggcacaaaaatcaaagcaatagagagaga--aagtaaaaatataatgtgagtatgagagagaaa 40854679  T
Q  280 ggtgttacaaaagttgttagaaaatgg 306  Q
      ||| |||||||||||||||||||||    
T  40854680 attgtcacaaaagttgttagaaaatgg 40854706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 41430045 - 41430205
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||||| || |||||||| | || ||||||||  |||||||||||||||  || ||||| ||| || | ||||| ||||  |||||||    
T  41430045 tgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatatattgacacgaaaaccaaagcaata--gagagat 41430142  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||| || ||| | |||||||| ||| |||||||||||||||||||||||    
T  41430143 aaagtaaaaatataatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggtt 41430205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 305
Target Start/End: Complemental strand, 26018226 - 26018061
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    ||||||||| |||||||||| || ||||||||||||| ||||| ||||| || ||||||| |||||||| |||||||| | | ||| || ||||||  ||    
T  26018226 tagagtagttttatttgaacgtctatttgcttgacaattaaatagacaatcatatttttataaagaaaagtatgtatttgtataaaaattaaagta--at 26018129  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||| ||||||||||||||||| |||||||| ||| || | ||| ||||||||| ||| ||||||    
T  26018128 agagagagaaagtaaaaatataatgtgaatatgagagataatgttgtcacaaaagttattataaaatg 26018061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 41590415 - 41590525
Alignment:
Q  148 ttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataa 247  Q
    ||||||||||||| |||||||||||||| |||| ||||||||  ||||||||| |||||||||||||||||||||| |||||||||  ||||| | | ||    
T  41590415 ttatttgaacatctatttgcttgacaaccaaatagacaaccatgtttttacaaggaaaaatatgtattggcacaaaaatcaaagta--atagaaaaagaa 41590512  T
Q  248 agtaaaaatataa 260  Q
    |||||||||||||    
T  41590513 agtaaaaatataa 41590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 48145697 - 48145579
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||||||||||||||            |||||| |||||||||||||||| ||||||||||||||||||||||||||  |||    
T  48145697 agagtagtgttatttgaacatcaatttgcttga------------caaccatatttttacaaagaaaagtatgtattggcacaaatatcaaagta--ata 48145612  T
Q  239 gagagataaagtaaaaatataatgcgaatatga 271  Q
    |||||| ||||||||||||||||| || |||||    
T  48145611 gagagagaaagtaaaaatataatgtgagtatga 48145579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 36352477 - 36352640
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaa-ctaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagaga 244  Q
    |||||||||||||||||| || ||||||| ||| || ||||||||  |||||||||||||||  || ||||| ||| || ||||||| ||||  ||||||    
T  36352477 tgttatttgaacatcaatgtgattgacaaactacatggacaaccatctttttacaaagaaaatcatatattgacacgaaaatcaaagcaata--gagaga 36352574  T
Q  245 taaagtaaaaatataatgcgaatat--gaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||||||||||||  | |||  || |||||||| ||| ||||||||||||| |||||||||    
T  36352575 taaagtaaaaatataatgtaagtatgagagagagaaagttgtcacaaaagttgttacaaaatggtt 36352640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 47954029 - 47954152
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||| ||||||| |||||||| ||||| |||| ||||| || |||  |||| ||| |||  |||||||||||||||| || |||||||||||||    
T  47954029 ttgacaaccatatttttataaagaaaagtatgtgttggtacaaaaattaaaacaataaagaaaga--aagtaaaaatataatgtgagtatgaaagagaaa 47954126  T
Q  280 ggtgttacaaaagttgttagaaaatg 305  Q
    | ||| ||||||||||||||||||||    
T  47954127 gttgtcacaaaagttgttagaaaatg 47954152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 42598135 - 42598257
Alignment:
Q  180 ttgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| |||||  ||||||||| |||||| |||||||||  || ||||| ||| |||    
T  42598135 ttgacaaccacatttttataaagaaaattatgtattggcacaaatatctaagta--atagagagaaaaagtataaatataatatgagtatgagagataaa 42598232  T
Q  280 ggtgttacaaaagttgttagaaaat 304  Q
    | | | |||||| |||||| |||||    
T  42598233 gttatcacaaaaattgttaaaaaat 42598257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 308
Target Start/End: Original strand, 46259979 - 46260145
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatat 237  Q
    |||||||||||||||| || ||| ||  |||||| ||  |||| || |||||  |||||||||||||||||||||||||| || || | |||||||  ||    
T  46259979 tagagtagtgttatttcaagatctat--gcttgagaatcaaatagataaccatgtttttacaaagaaaaatatgtattggtacgaaaaccaaagta--at 46260074  T
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||| ||| ||||||||||||||||   ||||||| ||| |||| ||| ||||||||||||  |||||||||    
T  46260075 agaaagagaaagtaaaaatataatataaatatgagagataaagttgtcacaaaagttgttttaaaatggtt 46260145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 34507099 - 34507255
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||||| || |||||||| | || |||||| |  |||||| ||| ||||  |||||||| ||| || ||||||| |||| |||||||     
T  34507099 tgttatttgaacatcaatgtgattgacaaccacatggacaactatctttttataaaaaaaatcatgtattgacacgaaaatcaaagcaatagagagaga- 34507197  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
     |||||||||||||||| || ||||  ||| || | ||| |||||||||||||||||||    
T  34507198 -aagtaaaaatataatgtgagtatgggagataaggttgtcacaaaagttgttagaaaat 34507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 41589977 - 41590088
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagag 243  Q
    ||||||||||||||||  ||||| |||||||| |||| ||||| || ||||||| || |||||||||||||||||||||| |||||||||  ||||| |     
T  41589977 agtgttatttgaacat--atttgtttgacaac-aaatagacaatcatatttttataaggaaaaatatgtattggcacaaaaatcaaagta--atagaaaa 41590071  T
Q  244 ataaagtaaaaatataa 260  Q
    | |||||||||||||||    
T  41590072 agaaagtaaaaatataa 41590088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 1471183 - 1471344
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||| | ||||| | ||||||| | |||||||||| |  ||||||||||| || ||  | ||||||| || ||||||| ||||  |||||    
T  1471183 gtgttatttgaacaactatttgatagacaacttatttgacaaccataaatttacaaagaagaagtagattttggcacgaaaatcaaagcaata--gagag 1471280  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||||| ||| || || ||||| |||||||| ||| ||||||||||||| |||||||||    
T  1471281 ataaagtaaaaacata-tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggtt 1471344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 18111540 - 18111665
Alignment:
Q  182 gacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||||| || |||||||||||||| || | |||||||  || ||||||||||||  |||||||||||||||||||||||| || ||||| |||||||     
T  18111540 gacaaccatatatttacaaagaaaaaataggcattggcaagaaaatcaaagtaata--gagagataaagtaaaaatataatgtgagtatgagagagaaaa 18111637  T
Q  281 gtgttacaaaagttgttagaaaatggtt 308  Q
     ||| |||||| || ||| |||||||||    
T  18111638 ttgtcacaaaaattattataaaatggtt 18111665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 308
Target Start/End: Complemental strand, 46829653 - 46829497
Alignment:
Q  150 atttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataaa 248  Q
    ||||||||| | ||||| | ||||||| | |||||||||| |  |||||||||||||| || || ||||||| || ||||||| |  |||||||||||||    
T  46829653 atttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaagaaaaagtaggttttggcacgaaaatcaaagca--atagagagataaa 46829556  T
Q  249 gtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||| || ||| || ||||| |||||||| ||| |||||| |||||| |||||||||    
T  46829555 gtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaaattgttacaaaatggtt 46829497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 294
Target Start/End: Complemental strand, 33775118 - 33774970
Alignment:
Q  145 gtgttatttgaacatcaatttgcttgacaactaaattgacaaccac--atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||    |||| ||||||||| | ||||||||||   |||| || |||||||| || ||||||| ||||| ||||| | ||||  ||||    
T  33775118 gtgttatttgaacaatcgtttgattgacaacttatttgacaaccatgaatttata-aaagaaaagtaggtattggtacaaaaatcaatgcaata--gaga 33775022  T
Q  243 gataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagtt 294  Q
     |||||||||||| |||||| ||||||||||||||||| ||| |||||||||    
T  33775021 aataaagtaaaaacataatgtgaatatgaaagagaaagttgtgacaaaagtt 33774970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 305
Target Start/End: Complemental strand, 9363570 - 9363408
Alignment:
Q  139 agagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatata 238  Q
    |||||||||||||||||||||  ||||| |||||||| || |  |||||    ||||||||||||||| |||||||||  || || |||||||||  ||     
T  9363570 agagtagtgttatttgaacattcatttgtttgacaaccaactgaacaactg--tttttacaaagaaaagtatgtattgatacgaaaatcaaagta--atg 9363475  T
Q  239 gagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    |||||| ||||| ||||||||||| |  ||| | ||| |||| ||| ||||||||||||| ||||||    
T  9363474 gagagagaaagtcaaaatataatgtgtgtattagagataaagttgtcacaaaagttgttataaaatg 9363408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 31445407 - 31445335
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||||||| ||||||||||||||||| || ||||||| |||||| ||| ||||||||||| | |||||||||    
T  31445407 atagagagagaaagtaaaaatataatgtgagtatgaaaaagaaagttgtcacaaaagttgtcaaaaaatggtt 31445335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 41018793 - 41018693
Alignment:
Q  194 tttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagt 293  Q
    |||||||||||||| | |||||  |||||| | |||||||||| |||||||  |||||||||||||||| || ||||| | |||||| ||| ||||||||    
T  41018793 tttacaaagaaaaagaggtattaacacaaaaaccaaagtaatagagagaga--aagtaaaaatataatgtgagtatgagatagaaagttgtcacaaaagt 41018696  T
Q  294 tgt 296  Q
    |||    
T  41018695 tgt 41018693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 34108750 - 34108908
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaa-ccacatttttacaaagaaaaat-atgtattggcacaaatatcaaagtaatatagagag 243  Q
    |||||||||||||||||| || |||||||| | || ||||| |||  |||||| |||  ||||| |||||||| |||||| ||||||| | || ||||||    
T  34108750 tgttatttgaacatcaatgtgattgacaaccacatggacaaaccatctttttaaaaaagaaaatcatgtattgacacaaaaatcaaagcagtagagagag 34108849  T
Q  244 ataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
          |||||| |||||| || ||||| |||||||  ||| |||||||||||||||||||||||    
T  34108850 ------taaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatggtt 34108908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 308
Target Start/End: Original strand, 43159463 - 43159628
Alignment:
Q  140 gagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatag 239  Q
    |||| |||||||||||||| | ||||   ||||||||    ||||||||| |  |||||||||||||| | ||||||  ||||| | ||||| |  ||||    
T  43159463 gagttgtgttatttgaacaaccatttaggtgacaactttgatgacaaccataaatttacaaagaaaaagaggtattgatacaaa-accaaagca--atag 43159559  T
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| |||||||||||||||| ||| ||||| | |||||| ||| |||||| |||||| |||||||||    
T  43159560 agagagaaagtaaaaatataatacgagtatgagatagaaagttgtcacaaaaattgttaaaaaatggtt 43159628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 44651126 - 44651236
Alignment:
Q  149 tatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaatatagagagataa 247  Q
    |||||||||||||||||  |||||||||| ||||| ||| | ||||||||||| ||||| ||||  |||| ||||| || ||||||||    ||||| ||    
T  44651126 tatttgaacatcaatttcattgacaactatattgataactatatttttacaaaaaaaaagtatgcgttggtacaaaaattaaagtaat----agagagaa 44651221  T
Q  248 agtaaaaatataatg 262  Q
    |||||||||||||||    
T  44651222 agtaaaaatataatg 44651236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 296
Target Start/End: Complemental strand, 41458781 - 41458626
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaata 236  Q
    ||||| ||||||||||||||| | ||||| ||||||||| |  ||||||||| |  |||| ||||||||| || ||||| ||||||| ||||||  ||||    
T  41458781 tagaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccata-atttataaagaaaaagtaggtatttgcacaaaaatcaaaacaata 41458683  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |  ||| |||||||||||| |||||| || ||||| |||||||| || ||||||| ||||    
T  41458682 t--agaaataaagtaaaaa-ataatgtgagtatgagagagaaagttgctacaaaaattgt 41458626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 47012495 - 47012620
Alignment:
Q  178 aattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagaga 277  Q
    |||||||||||| |||||||||||||||| ||| | |||| ||||| ||||||  |||| | | ||  ||| ||||||||||||| |||||||| ||| |    
T  47012495 aattgacaaccatatttttacaaagaaaagtatatgttggtacaaaaatcaaaacaataaaaaaag--aaaataaaaatataatgtgaatatgagagata 47012592  T
Q  278 aaggtgttacaaaagttgttagaaaatg 305  Q
    ||  ||| |||||| || ||||||||||    
T  47012593 aaattgtcacaaaaattattagaaaatg 47012620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 4292560 - 4292458
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaa 290  Q
    |||||||||||||||| ||  |||||| ||||| ||||||| |  ||||||||| |||||||||| |||||| || ||||| |||| ||| ||| |||||    
T  4292560 atttttacaaagaaaattaaatattggtacaaaaatcaaagca--atagagagagaaagtaaaaacataatgtgagtatgagagag-aagttgtcacaaa 4292464  T
Q  291 agttgt 296  Q
    ||||||    
T  4292463 agttgt 4292458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 3937052 - 3937158
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | ||||| |||| |||  | ||||||||||||| | ||||||||||    ||||||||||||||| |||||| || ||||| ||||||||    
T  3937052 tgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagtaata----gagataaagtaaaaagataatgtgagtatgagagagaaag 3937147  T
Q  281 gtgttacaaaa 291  Q
     ||| ||||||    
T  3937148 ttgtcacaaaa 3937158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 29855361 - 29855272
Alignment:
Q  191 atttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    |||||| ||||||||||| | ||||| ||| || | ||||| |||| || ||||| |||||||||||||||| || ||||| ||||||||    
T  29855361 atttttgcaaagaaaaatgtatattgacacgaaaaacaaagaaatagagggagatgaagtaaaaatataatgtgagtatgagagagaaag 29855272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 38340364 - 38340433
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||| |||||||||| |||||| || ||||| ||| |||| ||| ||||||||||||| ||||||    
T  38340364 atagagagaaaaagtaaaaacataatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatg 38340433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 6269452 - 6269384
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    |||||||||  |||||||||||| || ||||| |||||||| ||| |||||| |||||| |||||||||    
T  6269452 agagataaaacaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattgttataaaatggtt 6269384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 291
Target Start/End: Complemental strand, 7817821 - 7817672
Alignment:
Q  138 tagagtagtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaa-tatgtattggcacaaatatcaaagtaata 236  Q
    ||||| ||||||||||||||| | ||||| ||||||||| |  ||||||||| |  |||||||||||||| |   |||| |||| || ||||||| |  |    
T  7817821 tagaggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccata-atttacaaagaaaaagtggatatttgcacgaaaatcaaagca--a 7817725  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaa 291  Q
    ||||||||||||||||||  |||||| || ||||| |||||||| ||| ||||||    
T  7817724 tagagagataaagtaaaa--ataatgtgagtatgagagagaaagttgtcacaaaa 7817672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 17002426 - 17002354
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| ||| || |||||||||||||| || |||||||||||||| | | | ||||||||||| |||||||||    
T  17002426 atagaaagagaaggtaaaaatataatgtgagtatgaaagagaaagttatcataaaagttgttaaaaaatggtt 17002354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 19785966 - 19786120
Alignment:
Q  139 agagtagtgttatttgaac-atcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatat-gtattggcacaaatatcaaagtaata 236  Q
    |||| |||||||||||||| |||||||||  |||||||| | |||||||||| | |||||||||||||||  | |||||||||| || | || || |  |    
T  19785966 agaggagtgttatttgaacaatcaatttg-atgacaacttatttgacaaccata-ttttacaaagaaaaaagtggtattggcacgaaaaccagagca--a 19786061  T
Q  237 tagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||  ||||| || ||||  |||||||| |||| ||||||||||    
T  19786062 tagagagataaagtaaaaa-gtaatgtgagtatgtgagagaaagttgttgcaaaagttgt 19786120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 30941502 - 30941415
Alignment:
Q  211 gtattggcacaaatatcaaagtaatatagagagata--aagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||| |||||| ||||||| |||| ||||||| |  ||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  30941502 gtattgacacaaaaatcaaagcaatagagagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 30941415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 33578300 - 33578368
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| |||||||||||||||||  ||||||||| |||||| ||| | ||||||||| | |||||||||    
T  33578300 agagagaaagtaaaaatataatgtaaatatgaaaaagaaagttgtcataaaagttgtcaaaaaatggtt 33578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 39231710 - 39231769
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| |||| ||||||||||    
T  39231710 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgt 39231769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 41894002 - 41893935
Alignment:
Q  238 agagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    ||||||||||||||||||  ||||| || |||||||||||||| ||| ||||||||||| | |||||||    
T  41894002 agagagataaagtaaaaag-taatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatgg 41893935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 43573525 - 43573584
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||| |||| ||||||||||    
T  43573525 atagagagataaagtaaaaa-gtaatgtgaatatgagagagaaagttgttgcaaaagttgt 43573584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 44895501 - 44895614
Alignment:
Q  181 tgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaag 280  Q
    ||||||||| | |||||||||| |||  | ||| ||||||||| | ||||| |||| |||||||  ||||||||| |||| | |||||||| | ||||||    
T  44895501 tgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagaga--aagtaaaaagataacgtgaatatgagatagaaag 44895598  T
Q  281 gtgttacaaaagttgt 296  Q
     ||| |||||||||||    
T  44895599 ttgtcacaaaagttgt 44895614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 20337400 - 20337357
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||    
T  20337400 atagaaagataaagtaaaaatataatgtgaatatgagagagaaa 20337357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 21023099 - 21023141
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaa 279  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    
T  21023099 atagagagataaagtaaaaa-ataatgtgaatatgaaagagaaa 21023141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 13729815 - 13729746
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatgg 306  Q
    |||||||||||||||||||| |||||| || ||||| | |||||| |||| |||||||||| | |||||||    
T  13729815 atagagagataaagtaaaaa-ataatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatgg 13729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 19562262 - 19562348
Alignment:
Q  168 ttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaa 254  Q
    ||||||||| ||  || ||||| |||||||||||||||| ||||||||  ||| ||  ||||||||||| | ||||| |||||||||    
T  19562262 ttgacaacttaacggataaccatatttttacaaagaaaagtatgtatttacacgaaagtcaaagtaatagatagagagaaagtaaaa 19562348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 46578094 - 46578177
Alignment:
Q  211 gtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||| ||||||  |||| |||||||  ||||||||  |||||| |||||||| ||| |||  |||||||||||||||    
T  46578094 gtattggcacaaaaatcaaatcaatagagagaga--aagtaaaatgataatgtgaatatgagagataaaattgttacaaaagttgt 46578177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 3062509 - 3062400
Alignment:
Q  144 agtgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaag-aaaaatatgtattggcacaaatatcaaagtaatatagaga 242  Q
    ||||||||||||||| | ||||| ||||||||| |  ||||||||| |  ||||||||| ||||||| ||||| ||||||| | ||||  |  |||||||    
T  3062509 agtgttatttgaacaaccatttggttgacaacttacatgacaaccata-atttacaaagaaaaaataggtatttgcacaaaaaccaaa--acaatagaga 3062413  T
Q  243 gataaagtaaaaa 255  Q
    |||||||||||||    
T  3062412 gataaagtaaaaa 3062400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 47448954 - 47448844
Alignment:
Q  196 tacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttg 295  Q
    ||||||||||  || ||| ||||||||| | ||||| |||| ||| |||  ||||||||| | |||| || ||||| |||||||| ||| ||||||||||    
T  47448954 tacaaagaaatttaggtagtggcacaaaaaccaaagcaatagagaaaga--aagtaaaaacacaatgtgagtatgagagagaaagttgtcacaaaagttg 47448857  T
Q  296 ttagaaaatggtt 308  Q
    | | |||||||||    
T  47448856 tcaaaaaatggtt 47448844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 48062146 - 48062077
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatg 305  Q
    ||||||||| |||||||||| |||||  || ||| | |||||||| ||||||||||||||| | ||||||    
T  48062146 atagagagagaaagtaaaaacataatatgagtataagagagaaagttgttacaaaagttgtaaaaaaatg 48062077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 4713662 - 4713603
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| |||| ||| |||||||| ||| | |||||||||    
T  4713662 atagagagataaagtaaaaa-ataatgtgaatttgagagagaaagttgtcataaaagttgt 4713603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 12007126 - 12007239
Alignment:
Q  193 ttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaag 292  Q
    |||||||||||||  ||  || ||||||||| ||||||| |||| |||||||  ||||| ||  || ||| || ||||| |||||||| ||| |||||||    
T  12007126 ttttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagaga--aagtagaatgatcatgtgagtatgagagagaaagttgtcacaaaag 12007223  T
Q  293 ttgttagaaaatggtt 308  Q
    |||| | |||||||||    
T  12007224 ttgtcaaaaaatggtt 12007239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 13152682 - 13152622
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||| |||||||||  |||||| || ||||| |||||||| ||| |||||||||||    
T  13152682 atagagagagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaagttgt 13152622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 28036833 - 28036774
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||| | |||||||| |||| ||||||||||    
T  28036833 atagagagataaagtaaaaa-ataatgtgagtataagagagaaagttgttgcaaaagttgt 28036774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 35072344 - 35072396
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttaca 288  Q
    ||||| ||| |||||||||||| |||| || |||||||||||||| |||||||    
T  35072344 atagaaagagaaagtaaaaatagaatgtgactatgaaagagaaagttgttaca 35072396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 38259149 - 38259081
Alignment:
Q  240 agagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| |||||||||| ||||||  | |||||||||||||| ||| ||||||||| | | |||||||||    
T  38259149 agagagaaagtaaaaacataatgttagtatgaaagagaaagttgtcacaaaagttatcaaaaaatggtt 38259081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 39332074 - 39332015
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||| | |||||||| |||||||||||||||    
T  39332074 atagagagataaagtaaaaag-taatgtgagtataagagagaaagttgttacaaaagttgt 39332015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 44184541 - 44184600
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||| ||| |||||||||||    
T  44184541 atagagagataaagtaaaaa-gtaatgtgagtatgagagagaaagttgtcacaaaagttgt 44184600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 141 - 308
Target Start/End: Complemental strand, 7247 - 7078
Alignment:
Q  141 agtagtgttatttgaacatcaatttgcttgacaa-------ctaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagta 233  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||  |||||||||| |||| |||| || |||||||||||||    
T  7247 agtagtgttatttgaacatcaatttgcttgacaaatgacaactaaattgacaaccacattt--acaaagaaaagtatgcattgacataaatatcaaagta 7150  T
Q  234 atatagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
      ||||||||| ||||||||||||||||  || ||| | |||||||| ||| |||||| |||||| |||||||||    
T  7149 --atagagagagaaagtaaaaatataatatgagtataagagagaaagttgtcacaaaa-ttgttaaaaaatggtt 7078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 2286 - 2227
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| ||| |||| |||| ||||||||||    
T  2286 atagagagataaagtaaaaa-ataatgtgactatgagagataaagttgttgcaaaagttgt 2227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 1322 - 1168
Alignment:
Q  146 tgttatttgaacatcaatttgcttgacaactaaattgacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagat 245  Q
    |||||||||||||||| |||| |||||||| | |||||||| || |||||||||||||||| ||| |||||||||||| | ||||| |||    |||||     
T  1322 tgttatttgaacatcagtttggttgacaaccacattgacaatcatatttttacaaagaaaagtatctattggcacaaaaaccaaagcaat----agagag 1227  T
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    ||| |||| ||||| || || |||||||||||||| ||| |||||||||||||| ||||    
T  1226 aaaataaagatatattgtgagtatgaaagagaaagttgtcacaaaagttgttaggaaat 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 94811 - 94889
Alignment:
Q  182 gacaaccacatttttacaaagaaaaatatgtattggcacaaatatcaaagtaatatagagagataaagtaaaaatataatg 262  Q
    |||||| | ||||||||||||||||||||||||| ||||||| |||||||||  ||||||||| ||||||||| |||||||    
T  94811 gacaactatatttttacaaagaaaaatatgtattagcacaaaaatcaaagta--atagagagagaaagtaaaattataatg 94889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 11053 - 10994
Alignment:
Q  236 atagagagataaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgt 296  Q
    |||||||||||||||||||| |||||| || ||||| |||||||| ||| |||||||||||    
T  11053 atagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgt 10994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 121715 - 121657
Alignment:
Q  246 aaagtaaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaat 304  Q
    ||||||||||||||||| || ||||| ||| |||  ||||||||||||||||| |||||    
T  121715 aaagtaaaaatataatgtgagtatgagagaaaaaattgttacaaaagttgttaaaaaat 121657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 366368 - 366312
Alignment:
Q  251 aaaaatataatgcgaatatgaaagagaaaggtgttacaaaagttgttagaaaatggtt 308  Q
    ||||| |||||| |||||||| |||||||| ||| ||||||||||||| |||||||||    
T  366368 aaaaacataatgtgaatatgagagagaaagttgtcacaaaagttgtta-aaaatggtt 366312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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