View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1633_low_10 (Length: 508)

Name: NF1633_low_10
Description: NF1633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1633_low_10
NF1633_low_10
[»] chr2 (45 HSPs)
chr2 (1-312)||(39222716-39223027)
chr2 (39-312)||(39192341-39192614)
chr2 (39-312)||(39198021-39198294)
chr2 (1-221)||(39389129-39389349)
chr2 (391-487)||(39223100-39223196)
chr2 (42-214)||(39161714-39161886)
chr2 (42-214)||(39207308-39207480)
chr2 (52-214)||(39215514-39215676)
chr2 (191-312)||(39388996-39389117)
chr2 (191-308)||(39161905-39162022)
chr2 (191-308)||(39207172-39207289)
chr2 (39-171)||(39397891-39398023)
chr2 (392-483)||(39192234-39192325)
chr2 (48-184)||(39137760-39137896)
chr2 (392-483)||(39197914-39198005)
chr2 (39-210)||(39468208-39468379)
chr2 (217-312)||(39215721-39215813)
chr2 (58-209)||(39369996-39370147)
chr2 (50-213)||(39459132-39459295)
chr2 (39-112)||(39137709-39137782)
chr2 (89-221)||(39414774-39414906)
chr2 (39-105)||(44895631-44895697)
chr2 (228-305)||(39421677-39421754)
chr2 (80-213)||(39473409-39473542)
chr2 (139-215)||(39381509-39381585)
chr2 (226-274)||(39473285-39473333)
chr2 (82-213)||(39421832-39421963)
chr2 (39-108)||(39222397-39222466)
chr2 (248-289)||(39468447-39468488)
chr2 (234-282)||(39137997-39138045)
chr2 (48-112)||(39152462-39152526)
chr2 (399-483)||(39162049-39162132)
chr2 (399-483)||(39207062-39207145)
chr2 (401-449)||(39381276-39381324)
chr2 (226-293)||(39381368-39381435)
chr2 (47-106)||(39451806-39451865)
chr2 (242-284)||(39370243-39370285)
chr2 (401-483)||(39388887-39388969)
chr2 (50-112)||(39458469-39458531)
chr2 (226-287)||(39152694-39152755)
chr2 (392-445)||(39215829-39215882)
chr2 (392-477)||(39370332-39370417)
chr2 (39-108)||(39390292-39390361)
chr2 (234-287)||(39459379-39459432)
chr2 (224-268)||(39397731-39397775)
[»] chr5 (3 HSPs)
chr5 (5-221)||(33560849-33561065)
chr5 (221-310)||(33561107-33561196)
chr5 (399-474)||(33561225-33561301)
[»] chr6 (2 HSPs)
chr6 (45-210)||(16113174-16113339)
chr6 (224-303)||(16113416-16113495)
[»] chr7 (3 HSPs)
chr7 (48-184)||(19807710-19807846)
chr7 (52-112)||(19807672-19807732)
chr7 (234-281)||(19807947-19807994)
[»] chr3 (1 HSPs)
chr3 (47-117)||(51574944-51575014)


Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 39222716 - 39223027
Alignment:
Q  1 atttgaagaacaagtgagggacataaaatcaaaggaggaggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagag 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39222716 atttgaagaacaagtgaaggacataaaatcaaaggaggaggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggagtttaaatcaaaagag 39222815  T
Q  101 aagcaatttgaaggacgatggaataaacttgagtcagcagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggac 200  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39222816 aagcaatttgaagaacgatggaataaacttgagtcagaagagaataagttcaaagcaaaggtgaaggagctcaacttcaaagaaaagtggtttgaaggac 39222915  T
Q  201 aagtcaaggatcctgtgtcaaggaaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaa 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39222916 aagtcaaggatcctgtgtcaaggaaaaaatatattgatggagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaa 39223015  T
Q  301 ctgttcctctta 312  Q
    ||||||||||||    
T  39223016 ctgttcctctta 39223027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 39192614 - 39192341
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagc 138  Q
    ||||||| ||||| | ||||||||||||  |||| ||||| ||||| || |||||||||||||||||||| ||||||||||||| | |||||||||||      
T  39192614 aggaacttgaatctagaaagaagcattttaaaagtcaagtggaggagttcaaatcaaaagagaagcaattagaaggacgatggagtgaacttgagtcaaa 39192515  T
Q  139 agagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaaggatcctgtgtcaaggaaaaaatatattgat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  39192514 agagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagcagtttgaaggactagtcaaggatcctgcgtcaaggaaaaagtatattgat 39192415  T
Q  239 gaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaactgttcctctta 312  Q
    || ||||||||||| ||||||||| |||||||||||| |||||||| | |||||| || ||||| |||||||||    
T  39192414 gaggaaaaagaatcaggtaaatgtgcttattcatcttatttattgacagaatttcattgcaactattcctctta 39192341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 39198294 - 39198021
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagc 138  Q
    ||||||| ||||| | ||||||||||||  |||| ||||| ||||| || |||||||||||||||||||| ||||||||||||| | |||||||||||      
T  39198294 aggaacttgaatctagaaagaagcattttaaaagtcaagtggaggagttcaaatcaaaagagaagcaattagaaggacgatggagtgaacttgagtcaaa 39198195  T
Q  139 agagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaaggatcctgtgtcaaggaaaaaatatattgat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  39198194 agagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagcagtttgaaggactagtcaaggatcctgcgtcaaggaaaaagtatattgat 39198095  T
Q  239 gaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaactgttcctctta 312  Q
    || ||||||||||| ||||||||| |||||||||||| |||||||| | |||||| || ||||| |||||||||    
T  39198094 gaggaaaaagaatcaggtaaatgtgcttattcatcttatttattgacagaatttcattgcaactattcctctta 39198021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 39389349 - 39389129
Alignment:
Q  1 atttgaagaacaagtgagggacataaaatcaaaggaggaggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagag 100  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||| |||||||  |||||||||| |||||||| ||||||||||||    
T  39389349 atttgaagaacaagtgaagggcattaaatcaaaggaggaggaactcgaatcacaaaaggagcatttgaaaagccaagttgaggacttcaaatcaaaagag 39389250  T
Q  101 aagcaatttgaaggacgatggaataaacttgagtcagcagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggac 200  Q
     ||| |||| || ||||||||||  |||| ||||    |||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |    
T  39389249 cagcgatttaaaagacgatggaacgaactggagttgaaagagtataagttcaaagtaaaggtgaaggagctcaacttaaaagaaaagcagtttgaagggc 39389150  T
Q  201 aagtcaaggatcctgtgtcaa 221  Q
    ||||||| ||||||| |||||    
T  39389149 aagtcaacgatcctgagtcaa 39389129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 391 - 487
Target Start/End: Original strand, 39223100 - 39223196
Alignment:
Q  391 ctttacaacctgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttccagttttcgtat 487  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39223100 ctttacaacctgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttccagttttcgtat 39223196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 39161714 - 39161886
Alignment:
Q  42 aactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcaga 141  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||| |||| |||||||||||||| |||||| |||| ||| |   |||    
T  39161714 aactcgaatcaaaaaataagcattttgaaagacaagttgaggacttcaaatcaaaacagaaacaatttgaaggacggtggaatgaactggagacgaaaga 39161813  T
Q  142 gaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaaggatcct 214  Q
    | ||||| |||||| ||| | |||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  39161814 gtataagctcaaagtaaatgagaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcct 39161886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 39207480 - 39207308
Alignment:
Q  42 aactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcaga 141  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||| |||| |||||||||||||| |||||| |||| ||| |   |||    
T  39207480 aactcgaatcaaaaaataagcattttgaaagacaagttgaggacttcaaatcaaaacagaaacaatttgaaggacggtggaatgaactggagacgaaaga 39207381  T
Q  142 gaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaaggatcct 214  Q
    | ||||| |||||| ||| | |||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  39207380 gtataagctcaaagtaaatgagaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcct 39207308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 39215514 - 39215676
Alignment:
Q  52 aaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataagttc 151  Q
    |||||||||||| || ||||| ||||| |||  |||| |||||||||||||||||||||||||||| |||||  ||||||||| |  |||||||||||||    
T  39215514 aaaaaagaagcaatttgaaagacaagttgagagctttgaatcaaaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttc 39215613  T
Q  152 aaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaaggatcct 214  Q
    |||| | |||| |||||| |||| |||||||| |||  ||||| |||||||||||||||||||    
T  39215614 aaagtacaggtaaaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 39215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 191 - 312
Target Start/End: Complemental strand, 39389117 - 39388996
Alignment:
Q  191 tttgaaggacaagtcaaggatcctgtgtcaaggaaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaat 290  Q
    ||||| |||||| | ||||| || | |||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||  ||||||||||| |||    
T  39389117 tttgatggacaaataaaggagcccgagtcaaggaaaaaatattttgatggggaaaaagaatccggtaaatgttcttattcatccagtttattgaaagaat 39389018  T
Q  291 ttctttacaactgttcctctta 312  Q
    || |||||||||||||||||||    
T  39389017 ttttttacaactgttcctctta 39388996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 39161905 - 39162022
Alignment:
Q  191 tttgaaggacaagtcaaggatcctgtgtcaaggaaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaat 290  Q
    ||||| |||||| | ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||| |||    
T  39161905 tttgatggacaactaaaggagcctgagtcaaggaaaaaatatattgatgaggaaaaagaatccggtaaatgttcttcttcatctagattattgaaagaat 39162004  T
Q  291 ttctttacaactgttcct 308  Q
    ||  ||| ||||||||||    
T  39162005 tttattataactgttcct 39162022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 39207289 - 39207172
Alignment:
Q  191 tttgaaggacaagtcaaggatcctgtgtcaaggaaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaat 290  Q
    ||||| |||||| | ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||| |||    
T  39207289 tttgatggacaactaaaggagcctgagtcaaggaaaaaatatattgatgaggaaaaagaatccggtaaatgttcttcttcatctagattattgaaagaat 39207190  T
Q  291 ttctttacaactgttcct 308  Q
    ||  ||| ||||||||||    
T  39207189 tttattataactgttcct 39207172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 39398023 - 39397891
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagc 138  Q
    |||| ||||||| | |||| ||||| || ||||||||||| ||||| || ||||||||||| |||||| |||||| ||| ||||| ||||||||||||      
T  39398023 aggagctcgaattacaaaataagcactttgaaagccaagttgaggatttcaaatcaaaagataagcaaattgaagaacggtggaaaaaacttgagtcaaa 39397924  T
Q  139 agagaataagttcaaagcaaaggtgaaggagct 171  Q
    ||||||| ||||||||| ||||||| |||||||    
T  39397923 agagaatcagttcaaagtaaaggtgcaggagct 39397891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 39192325 - 39192234
Alignment:
Q  392 tttacaacctgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttccagttttc 483  Q
    |||| ||| |||||||||||||||||||| || ||||||||||||||||||||| ||| |||||| |||||| ||||| |||||||||||||    
T  39192325 tttataacatgatctacttaattctttaaaaacatttttaatcatgttaatgttctatgtattagtcaatttgaaaagattttccagttttc 39192234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 39137760 - 39137896
Alignment:
Q  48 aatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataa 147  Q
    |||||||| |||||||  | ||||||||||||||||| |  |||||||||||||||||| |||||| ||| |||||  |||| ||||||  |||||||||    
T  39137760 aatcaaaagagaagcaacttgaaagccaagtcgaggattacaaatcaaaagagaagcaaattgaagaacggtggaaagaactcgagtcaaaagagaataa 39137859  T
Q  148 gttcaaagcaaaggtgaaggagctcaacttaaaagaa 184  Q
    |||||||| |  ||| || |||||||| |||||||||    
T  39137860 gttcaaagtactggtcaaagagctcaagttaaaagaa 39137896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 39198005 - 39197914
Alignment:
Q  392 tttacaacctgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttccagttttc 483  Q
    |||| ||| |||||||||||||||||||| || ||||||||||||||||||||| ||| |||||| |||||| ||||| |||||| ||||||    
T  39198005 tttataacatgatctacttaattctttaaaaacatttttaatcatgttaatgttctatgtattagtcaatttgaaaagattttcccgttttc 39197914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 39468208 - 39468379
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagc 138  Q
    |||| |||||||||||||||||  |||| || || ||||| ||||| || ||||||||||| ||||||||||| | ||| || ||  || |  |||||      
T  39468208 aggagctcgaatcaaaaaagaaatattttgacagtcaagttgaggatttcaaatcaaaagataagcaatttgatgaacggtgtaaagaattgaagtcaaa 39468307  T
Q  139 agagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaagga 210  Q
    |||||||  |||||||| ||||||||||||| |||| |||||||| |||  | |||||||||||||||||||    
T  39468308 agagaatcggttcaaagtaaaggtgaaggagttcaagttaaaagagaagcagattgaaggacaagtcaagga 39468379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 39215721 - 39215813
Alignment:
Q  217 gtcaaggaaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaactgttcctctta 312  Q
    |||||||||||||||||||||   ||||| | |||||||||||||||||||||||||| ||||||||||| | ||||  |||||| ||||||||||    
T  39215721 gtcaaggaaaaaatatattga---agaaacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctctta 39215813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 39369996 - 39370147
Alignment:
Q  58 gaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataagttcaaagca 157  Q
    |||||| || |||| |||||||||| |||| ||||| ||||| ||||||||||||||||| |||||  ||||||||| |  |||||| ||||||| ||      
T  39369996 gaagcaatttgaaacccaagtcgagcacttcaaatcgaaagaaaagcaatttgaaggacggtggaaagaacttgagttaaaagagaacaagttcatagtg 39370095  T
Q  158 aaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaagg 209  Q
     ||||||||||| || | |||||||| |||  ||||| | ||||||||||||    
T  39370096 caggtgaaggagttcgaattaaaagagaagcagtttggaagacaagtcaagg 39370147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 39459132 - 39459295
Alignment:
Q  50 tcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataagt 149  Q
    |||||||||||||| || ||||||||  | |||||||| |||| |||||||||||||||||||| ||   ||||  || | ||  | | |||||||||||    
T  39459132 tcaaaaaagaagcaatttgaaagccagtttgaggacttcaaattaaaagagaagcaatttgaagaacagcggaaagaattcgatgctgaagagaataagt 39459231  T
Q  150 tcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaaggatcc 213  Q
    |||||| |   ||||| |||||||| |||||||| |||   |||||||||||||||||||||||    
T  39459232 tcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatcc 39459295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 39137709 - 39137782
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaa 112  Q
    |||| ||| |||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||| |||||    
T  39137709 aggagctcaaatcaaaaaagaagcaattcgaaaaccaagttgaggatttcaaatcaaaagagaagcaacttgaa 39137782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 39414906 - 39414774
Alignment:
Q  89 aaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagt 188  Q
    ||||||||||||||||||||||||| |||||||||  ||||  || ||   |||||||||||||||  |  ||| || |||||||| ||||| || ||      
T  39414906 aaatcaaaagagaagcaatttgaagaacgatggaaagaactcaagacaaatgagaataagttcaaactactggtcaaagagctcaagttaaatgagaaac 39414807  T
Q  189 ggtttgaaggacaagtcaaggatcctgtgtcaa 221  Q
     ||||||||||||||| |||||||||| |||||    
T  39414806 agtttgaaggacaagttaaggatcctgagtcaa 39414774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 44895697 - 44895631
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagca 105  Q
    |||| ||||||||| ||||||||| ||| ||||||||||| |||| ||| |||||||||||||||||    
T  44895697 aggagctcgaatcagaaaagaagcgttttgaaagccaagttgaggccttcaaatcaaaagagaagca 44895631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 39421754 - 39421677
Alignment:
Q  228 aatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaactgtt 305  Q
    ||||| ||||||| ||||| ||||| |||||||||||||||||||||  |||||||||| | |||| || ||||||||    
T  39421754 aatattttgatgaggaaaatgaatctggtaaatgttcttattcatctaatttattgaaagagtttcatttcaactgtt 39421677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 39473542 - 39473409
Alignment:
Q  80 gaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataagttcaaagcaaaggtgaaggagctcaacttaa 179  Q
    ||||| || ||||||| || |||||||||||||| |||||||||  |||| ||||||  ||||||||||||||||| |   ||||||   ||||| ||||    
T  39473542 gaggaattcaaatcaatagcgaagcaatttgaagaacgatggaaagaactcgagtcaaaagagaataagttcaaagtactagtgaagtcactcaagttaa 39473443  T
Q  180 aagaaaagtggtttgaaggacaagtcaaggatcc 213  Q
    |||| |||  | |||||||| ||||| |||||||    
T  39473442 aagagaagcaggttgaaggagaagtcgaggatcc 39473409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 39381585 - 39381509
Alignment:
Q  139 agagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaaggatcctg 215  Q
    ||||||| ||||||||| |||| |||| |||||||| |||||||| |||  ||||||| |||||| |||||||||||    
T  39381585 agagaatgagttcaaagtaaagatgaatgagctcaagttaaaagagaagcagtttgaaagacaagacaaggatcctg 39381509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 39473333 - 39473285
Alignment:
Q  226 aaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatct 274  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  39473333 aaaatattttgatgaggaaatagaatcgggtaaatgttcttattcatct 39473285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 39421963 - 39421832
Alignment:
Q  82 ggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataagttcaaagcaaaggtgaaggagctcaacttaaaa 181  Q
    |||||| |||| ||| |||||| ||||||||| || ||||||  ||||  |||||  ||||||||||||||||| |   ||||| |||||||| ||||||    
T  39421963 ggacttcaaattaaacgagaagaaatttgaagaacaatggaaagaactcaagtcaaaagagaataagttcaaagtactagtgaaagagctcaaattaaaa 39421864  T
Q  182 gaaaagtggtttgaaggacaagtcaaggatcc 213  Q
    || ||| | |||| || || ||||||||||||    
T  39421863 gacaagcgatttggagcactagtcaaggatcc 39421832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 39222397 - 39222466
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatt 108  Q
    ||||||| ||||| |||||||||||||| ||||  ||||| ||||| || ||||||||||||| ||||||    
T  39222397 aggaactggaatccaaaaagaagcattttgaaaatcaagtggaggagttcaaatcaaaagagaggcaatt 39222466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 39468447 - 39468488
Alignment:
Q  248 gaatcgggtaaatgttcttattcatcttgtttattgaaaaaa 289  Q
    ||||| ||||||||||||||||||||| ||||||||||||||    
T  39468447 gaatctggtaaatgttcttattcatctagtttattgaaaaaa 39468488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 39137997 - 39138045
Alignment:
Q  234 ttgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttatt 282  Q
    ||||||| |||||||||||||||||  |||||||||||||| |||||||    
T  39137997 ttgatgaggaaaaagaatcgggtaagagttcttattcatctagtttatt 39138045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 39152462 - 39152526
Alignment:
Q  48 aatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaa 112  Q
    |||||||||||||| | || |||| ||| || |||||||| ||| ||||||||||||||||||||    
T  39152462 aatcaaaaaagaagaaatttgaaatccaggttgaggacttcaaaacaaaagagaagcaatttgaa 39152526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 483
Target Start/End: Original strand, 39162049 - 39162132
Alignment:
Q  399 cctgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttccagttttc 483  Q
    |||||||||||||||| |||||  |  |||||| ||||||||||||||||| | |||| | |||| |||||||||||||| ||||    
T  39162049 cctgatctacttaattttttaaacacgtttttactcatgttaatgttgtatgtcttagtc-atttgaaaagcttttccagatttc 39162132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 483
Target Start/End: Complemental strand, 39207145 - 39207062
Alignment:
Q  399 cctgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttccagttttc 483  Q
    |||||||||||||||| |||||  |  |||||| ||||||||||||||||| | |||| | |||| |||||||||||||| ||||    
T  39207145 cctgatctacttaattttttaaacacgtttttactcatgttaatgttgtatgtcttagtc-atttgaaaagcttttccagatttc 39207062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 39381324 - 39381276
Alignment:
Q  401 tgatctacttaattctttaagaatatttttaatcatgttaatgttgtat 449  Q
    |||||||| |||||| |||| ||||||||||||| ||||||||||||||    
T  39381324 tgatctacataattcattaaaaatatttttaatcgtgttaatgttgtat 39381276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 39381435 - 39381368
Alignment:
Q  226 aaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttc 293  Q
    |||||||||||| || ||  ||||||| ||||||||||||||||||| | ||||| ||||| ||||||    
T  39381435 aaaatatattgacgaggagcaagaatctggtaaatgttcttattcatatagtttactgaaagaatttc 39381368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 39451806 - 39451865
Alignment:
Q  47 gaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaa 106  Q
    ||||| |||||||||||||| ||||||||||| |||||  | ||||||||||||| ||||    
T  39451806 gaatctaaaaagaagcattttgaaagccaagtggaggagctcaaatcaaaagagaggcaa 39451865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 39370243 - 39370285
Alignment:
Q  242 gaaaaagaatcgggtaaatgttcttattcatcttgtttattga 284  Q
    |||||||| | |||||||||||||||||||||| |||||||||    
T  39370243 gaaaaagatttgggtaaatgttcttattcatctagtttattga 39370285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 483
Target Start/End: Complemental strand, 39388969 - 39388887
Alignment:
Q  401 tgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttccagttttc 483  Q
    |||||||||||||||  ||  ||  |||||||||||||||||||||||| |  ||| |||||| ||| |||||||||| ||||    
T  39388969 tgatctacttaattccatagaaacgtttttaatcatgttaatgttgtatgtcatagtcaatttgaaatgcttttccagatttc 39388887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 39458469 - 39458531
Alignment:
Q  50 tcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaa 112  Q
    |||||| |||||||||| ||||| |||||  |||| ||| |||||||||||||| ||||||||    
T  39458469 tcaaaacagaagcattttgaaagacaagtgaaggattttgaatcaaaagagaaggaatttgaa 39458531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 39152694 - 39152755
Alignment:
Q  226 aaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaa 287  Q
    ||||||| ||||||| |||| |||||| |||||||||| |||||  ||| ||||||||||||    
T  39152694 aaaatattttgatgaggaaatagaatcaggtaaatgtttttatttgtctagtttattgaaaa 39152755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 39215829 - 39215882
Alignment:
Q  392 tttacaacctgatctacttaattctttaagaatatttttaatcatgttaatgtt 445  Q
    |||| |||| ||||||| || || ||||| ||||||||||||||||||||||||    
T  39215829 tttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgtt 39215882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 39370332 - 39370417
Alignment:
Q  392 tttacaacctgatctacttaattctttaagaatatttttaatcatgttaatgttgtatatattagacaattttaaaagcttttcca 477  Q
    |||| |||| ||||||  || |||| ||| || ||| ||||||||||||||||||||| | || | |||||| |||||||||||||    
T  39370332 tttataacccgatctatatagttctataaaaacattcttaatcatgttaatgttgtatgtcttggtcaatttaaaaagcttttcca 39370417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 39390361 - 39390292
Alignment:
Q  39 aggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatt 108  Q
    ||||||| ||||| |||| ||||||||| ||||||||||| |||||  | ||| |||||| |||||||||    
T  39390361 aggaactggaatctaaaaggaagcattttgaaagccaagtggaggagctcaaaacaaaagtgaagcaatt 39390292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 39459379 - 39459432
Alignment:
Q  234 ttgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaa 287  Q
    ||||||| |||| |||||||||||| ||||||||||||| | | ||||||||||    
T  39459379 ttgatgaggaaacagaatcgggtaagtgttcttattcatttagcttattgaaaa 39459432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 39397775 - 39397731
Alignment:
Q  224 aaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttat 268  Q
    |||||||||||  |||| |||||||||||||||||| ||||||||    
T  39397775 aaaaaatatatcaatgaggaaaaagaatcgggtaaaggttcttat 39397731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 33560849 - 33561065
Alignment:
Q  5 gaagaacaagtgagggacataaaatcaaaggaggaggaactcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagc 104  Q
    ||||||||||||| |||||| |||| ||||||||| ||||||||||||||| |||||||||| | ||| ||||| |||||||| ||||||||| |||| |    
T  33560849 gaagaacaagtgaaggacattaaattaaaggaggaagaactcgaatcaaaagagaagcattttgcaagacaagttgaggacttcaaatcaaaacagaacc 33560948  T
Q  105 aatttgaaggacgatggaataaacttgagtcagcagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagt 204  Q
    ||||| | | |||||||||| |||| |||||   |||| | |||||| | | ||||||||||||||||| |||||||| ||||  || |||||||||||     
T  33560949 aatttcaggtacgatggaatgaactggagtcgaaagagtacaagttcgatgaaaaggtgaaggagctcagcttaaaagtaaagcagtgtgaaggacaagg 33561048  T
Q  205 caaggatcctgtgtcaa 221  Q
    |||||||||| ||||||    
T  33561049 caaggatcctatgtcaa 33561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 33561107 - 33561196
Alignment:
Q  221 aggaaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaactgttcctct 310  Q
    ||||||||||  |||||| | ||||||||||| ||||||||||||| ||||||| ||||||||||| |||||  ||| || |||||||||    
T  33561107 aggaaaaaatgcattgataaggaaaaagaatccggtaaatgttcttcttcatctagtttattgaaagaattttattataagtgttcctct 33561196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 474
Target Start/End: Original strand, 33561225 - 33561301
Alignment:
Q  399 cctgatctacttaattctttaagaatatttttaatcatgttaatg-ttgtatatattagacaattttaaaagctttt 474  Q
    ||||||||||||||| ||||||  | ||||||||||||||||||| |||||| | || | |||||| ||||||||||    
T  33561225 cctgatctacttaatcctttaaacacatttttaatcatgttaatgtttgtatgtcttggtcaatttgaaaagctttt 33561301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 16113174 - 16113339
Alignment:
Q  45 tcgaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaa 144  Q
    ||||||||||||| |||||||| ||||||||||| ||| | || |||||||| || ||||||||||||| ||| |||||  |||| || |||  ||||||    
T  16113174 tcgaatcaaaaaataagcatttggaaagccaagttgagtatttcaaatcaaacgataagcaatttgaagaacggtggaaagaactcgaatcaaaagagaa 16113273  T
Q  145 taagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagtggtttgaaggacaagtcaagga 210  Q
    | ||||||||| ||||| |||||||||||| |||||||| |||  | |||||| ||||||||||||    
T  16113274 tcagttcaaagtaaaggagaaggagctcaagttaaaagagaagcagattgaagtacaagtcaagga 16113339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 16113416 - 16113495
Alignment:
Q  224 aaaaaatatattgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaactg 303  Q
    |||||| ||||||| || ||||||||||||||||| |||||| |||||||| |||||||||||||| ||| || ||||||    
T  16113416 aaaaaacatattgacgaggaaaaagaatcgggtaagtgttctcattcatctagtttattgaaaaaaattcatttcaactg 16113495  T

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Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 19807710 - 19807846
Alignment:
Q  48 aatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacgatggaataaacttgagtcagcagagaataa 147  Q
    |||||||| |||||||  | ||||||||||||||||| |  |||||||||||||| ||| |||||| | | |||||  |||| ||||||  |||||||||    
T  19807710 aatcaaaagagaagcaacttgaaagccaagtcgaggaatacaaatcaaaagagaatcaaattgaagaaaggtggaaagaactcgagtcaaaagagaataa 19807809  T
Q  148 gttcaaagcaaaggtgaaggagctcaacttaaaagaa 184  Q
    |||||||| |  ||| || |||||||| |||||||||    
T  19807810 gttcaaagtactggtcaaagagctcaagttaaaagaa 19807846  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 19807672 - 19807732
Alignment:
Q  52 aaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaa 112  Q
    |||||||||||| ||||||| |||||| |||||||| |||||||||||||||||| |||||    
T  19807672 aaaaaagaagcaattcgaaaaccaagttgaggacttcaaatcaaaagagaagcaacttgaa 19807732  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 19807947 - 19807994
Alignment:
Q  234 ttgatgaagaaaaagaatcgggtaaatgttcttattcatcttgtttat 281  Q
    ||||||| ||||||| |||||||||| |||||||||||||| ||||||    
T  19807947 ttgatgaggaaaaagcatcgggtaaaagttcttattcatctagtttat 19807994  T

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Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 51574944 - 51575014
Alignment:
Q  47 gaatcaaaaaagaagcatttcgaaagccaagtcgaggactttaaatcaaaagagaagcaatttgaaggacg 117  Q
    |||||| ||||||||||||| |||||||||||  ||||  | |||||||||||||| ||||||||||||||    
T  51574944 gaatcagaaaagaagcattttgaaagccaagtgaaggaactcaaatcaaaagagaaacaatttgaaggacg 51575014  T

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