View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1633_low_15 (Length: 427)
Name: NF1633_low_15
Description: NF1633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1633_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 11 - 410
Target Start/End: Complemental strand, 26474281 - 26473882
Alignment:
| Q |
11 |
agcaaaggtaaatactatcgaggagataaggacttacatctggagataatccttgtgttccatacttgtcatcccagaacatagttccaatgcgatatat |
110 |
Q |
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| T |
26474281 |
agcaaaggtaaatacgattgaggagataaggacttacatctggagataatccttgtgttccatacttgtcatcccagaacatagttccaatgcgatatat |
26474182 |
T |
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| Q |
111 |
ttgtggaatacttaacacctaatagagtgaggaattaaacaagaaattataggttacattggttagaatcattcctcctttcccgaacatgtgattcaga |
210 |
Q |
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| T |
26474181 |
ttgtggaatacttaaaacctaatagagtgaggaattaaacaagaaattataggttacattggttagaatcattcctcctttcccgaacatgtgattcaga |
26474082 |
T |
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| Q |
211 |
taaaattgcatttagtcataacacttcaaattgaaggtgtatctgacaccgacatataatcacttcaattttctcaattttttaatgatgtttatgtcag |
310 |
Q |
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| T |
26474081 |
taaaattgcatgtagtcataacacttcaaattgaaggtgtatctgaaaccgacatataatcacttcaattttctcaattttttaatgatgtttatgtcag |
26473982 |
T |
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| Q |
311 |
tgttatgtatgattctgtgtcaatacttcacagataatattcaatcttaagttcattctccatagaaaaccataaattagagaaaagcagaaacagttag |
410 |
Q |
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| T |
26473981 |
tgttatgtatgattctgtgtcaatacttcacagataatattcaatcttaagttcattcttcatagaaaaccataagttagagaaaagcagaaacagttag |
26473882 |
T |
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