View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16341_high_5 (Length: 222)
Name: NF16341_high_5
Description: NF16341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16341_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 204
Target Start/End: Complemental strand, 972133 - 971943
Alignment:
| Q |
14 |
cagagagcaaaatctcactggcttcaagcatgagataaaaattccaaatactttcacaaaaaagctactcagagaaataagagaaatactatcaagagta |
113 |
Q |
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| T |
972133 |
cagagagcaaaatctcactggcttcaagcacgagataaaaattccagatactttcacaaaaaagctactcagagaaataagagaaatactatcaagagta |
972034 |
T |
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| Q |
114 |
ttcaggatgttgatgggagatgttggagtgacatcaatcatattaacagtatttttatagattatttcactaatatttttgctacttcaaa |
204 |
Q |
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| T |
972033 |
ttcaggatgttgatgggagatgttggagtgacatcaatcatattaacagtatttttatagattatttcactaatatttttgctacttcaaa |
971943 |
T |
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