View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16343_high_7 (Length: 204)
Name: NF16343_high_7
Description: NF16343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16343_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 35524667 - 35524477
Alignment:
| Q |
1 |
ctctatcatgggatcgccaccattattggcaccccaggttcaccatcttcaccattcagcttaggttgtttgggttcagattgaatttatcatcaatttg |
100 |
Q |
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| T |
35524667 |
ctctatcactggatcgccaccattattggcaccccaggttcaccatcttcaccattcagcttaggttgtttgggttcagattgaatttatcatcaatttg |
35524568 |
T |
|
| Q |
101 |
attttttgtttgtaggaacaccttaccaaggtggcatattcttccttgacataatatttcctactgactatcccttcaagcctccacaggt |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35524567 |
attttttgtttgtaggaacaccttaccaaggtggcatattcttccttgacataatatttcctactgactatcccttcaagcctccccaggt |
35524477 |
T |
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