View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16344_low_9 (Length: 338)

Name: NF16344_low_9
Description: NF16344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16344_low_9
NF16344_low_9
[»] chr5 (40 HSPs)
chr5 (19-331)||(35807573-35807879)
chr5 (192-241)||(40445991-40446038)
chr5 (185-248)||(22498943-22499003)
chr5 (172-239)||(42168931-42168996)
chr5 (186-248)||(781864-781924)
chr5 (200-248)||(8545003-8545049)
chr5 (188-248)||(23118053-23118111)
chr5 (185-217)||(3222761-3222793)
chr5 (185-248)||(3671219-3671280)
chr5 (170-257)||(7630160-7630245)
chr5 (201-248)||(8639344-8639389)
chr5 (169-260)||(15889400-15889489)
chr5 (189-252)||(17145351-17145412)
chr5 (167-219)||(31708127-31708179)
chr5 (202-248)||(18147571-18147615)
chr5 (169-239)||(790129-790198)
chr5 (169-219)||(1642362-1642412)
chr5 (185-219)||(5107244-5107278)
chr5 (186-255)||(8882399-8882466)
chr5 (189-219)||(11017204-11017234)
chr5 (171-217)||(16071394-16071440)
chr5 (187-256)||(17144472-17144539)
chr5 (187-248)||(18391601-18391660)
chr5 (169-214)||(2475341-2475386)
chr5 (169-214)||(4374924-4374969)
chr5 (169-214)||(5589534-5589579)
chr5 (169-214)||(6928427-6928472)
chr5 (189-241)||(11647205-11647255)
chr5 (188-236)||(25607060-25607106)
chr5 (176-248)||(39914902-39914971)
chr5 (188-239)||(2705518-2705567)
chr5 (185-248)||(6489008-6489069)
chr5 (193-248)||(16133072-16133125)
chr5 (187-219)||(17465396-17465428)
chr5 (169-248)||(25603983-25604060)
chr5 (187-241)||(27479631-27479684)
chr5 (169-248)||(32200430-32200507)
chr5 (189-248)||(34702491-34702548)
chr5 (189-248)||(35109401-35109458)
chr5 (201-248)||(43108570-43108615)
[»] chr3 (52 HSPs)
chr3 (169-255)||(21914054-21914138)
chr3 (177-255)||(45096020-45096096)
chr3 (186-255)||(25505701-25505768)
chr3 (169-248)||(30200827-30200904)
chr3 (169-239)||(35191800-35191868)
chr3 (183-255)||(17588356-17588426)
chr3 (177-217)||(41990575-41990615)
chr3 (186-255)||(53207964-53208031)
chr3 (169-241)||(1111824-1111894)
chr3 (185-241)||(27397611-27397665)
chr3 (190-250)||(39100420-39100478)
chr3 (168-248)||(51250215-51250293)
chr3 (177-248)||(13042791-13042860)
chr3 (177-248)||(13050868-13050937)
chr3 (169-217)||(20400107-20400155)
chr3 (169-248)||(38573556-38573633)
chr3 (186-248)||(1149069-1149129)
chr3 (192-238)||(1456546-1456590)
chr3 (169-239)||(4216383-4216450)
chr3 (170-217)||(7101777-7101823)
chr3 (188-219)||(42074131-42074162)
chr3 (185-239)||(54230098-54230150)
chr3 (177-255)||(55126000-55126076)
chr3 (187-256)||(5702179-5702245)
chr3 (185-219)||(8075813-8075847)
chr3 (189-219)||(8139743-8139773)
chr3 (185-219)||(13829076-13829110)
chr3 (189-219)||(14771359-14771389)
chr3 (200-257)||(33771682-33771737)
chr3 (169-219)||(34899125-34899175)
chr3 (189-250)||(39869810-39869869)
chr3 (185-219)||(45885476-45885510)
chr3 (169-219)||(46226008-46226058)
chr3 (186-255)||(53681877-53681944)
chr3 (189-241)||(7829904-7829954)
chr3 (189-241)||(12976605-12976655)
chr3 (184-248)||(21513289-21513351)
chr3 (207-255)||(22462306-22462352)
chr3 (169-214)||(30269151-30269196)
chr3 (169-214)||(41990832-41990877)
chr3 (168-248)||(43796819-43796897)
chr3 (186-219)||(46253897-46253930)
chr3 (189-248)||(5117209-5117266)
chr3 (185-221)||(6835850-6835886)
chr3 (189-248)||(19468452-19468509)
chr3 (177-248)||(23147969-23148038)
chr3 (185-217)||(24273653-24273685)
chr3 (184-255)||(33745093-33745162)
chr3 (185-248)||(38130958-38131019)
chr3 (192-247)||(49975811-49975864)
chr3 (185-248)||(52119377-52119438)
chr3 (189-248)||(53996300-53996357)
[»] chr7 (40 HSPs)
chr7 (169-248)||(6384852-6384929)
chr7 (169-255)||(40187619-40187703)
chr7 (168-248)||(20103436-20103514)
chr7 (186-239)||(31533393-31533446)
chr7 (188-255)||(38911293-38911358)
chr7 (177-255)||(41250038-41250114)
chr7 (186-239)||(7872748-7872799)
chr7 (177-238)||(19793532-19793591)
chr7 (180-241)||(31723398-31723457)
chr7 (167-248)||(37235312-37235391)
chr7 (168-248)||(46987087-46987165)
chr7 (185-248)||(35142148-35142209)
chr7 (169-239)||(2618689-2618757)
chr7 (185-255)||(2916096-2916164)
chr7 (168-219)||(6768689-6768740)
chr7 (169-239)||(10423971-10424039)
chr7 (169-239)||(18714458-18714526)
chr7 (184-219)||(25923419-25923454)
chr7 (187-241)||(35165541-35165593)
chr7 (177-219)||(20085750-20085792)
chr7 (187-248)||(21050223-21050282)
chr7 (177-241)||(1399170-1399232)
chr7 (169-241)||(10236888-10236958)
chr7 (169-214)||(23639482-23639527)
chr7 (192-248)||(30296334-30296388)
chr7 (192-248)||(37230034-37230088)
chr7 (169-214)||(37669336-37669381)
chr7 (169-214)||(43156153-43156198)
chr7 (200-248)||(48527191-48527237)
chr7 (179-219)||(3532609-3532649)
chr7 (172-239)||(3532995-3533059)
chr7 (177-248)||(5458062-5458131)
chr7 (185-248)||(5579694-5579755)
chr7 (200-239)||(22777373-22777410)
chr7 (169-217)||(23069840-23069888)
chr7 (200-255)||(27544951-27545004)
chr7 (169-248)||(39801707-39801784)
chr7 (177-248)||(39926529-39926598)
chr7 (189-248)||(41029273-41029330)
chr7 (169-248)||(48007530-48007607)
[»] chr4 (57 HSPs)
chr4 (169-248)||(7371531-7371608)
chr4 (169-255)||(46676481-46676565)
chr4 (177-248)||(17216120-17216189)
chr4 (185-248)||(19908693-19908754)
chr4 (169-255)||(11269688-11269772)
chr4 (169-255)||(18635524-18635608)
chr4 (186-248)||(19124622-19124682)
chr4 (185-254)||(24785461-24785528)
chr4 (185-254)||(24822738-24822805)
chr4 (169-219)||(47806239-47806289)
chr4 (169-257)||(11144648-11144734)
chr4 (177-248)||(38416058-38416127)
chr4 (185-248)||(43034341-43034402)
chr4 (171-238)||(1701619-1701685)
chr4 (177-255)||(25978312-25978387)
chr4 (186-248)||(44221448-44221508)
chr4 (169-219)||(37800859-37800909)
chr4 (186-239)||(49308830-49308881)
chr4 (170-219)||(22630344-22630393)
chr4 (185-236)||(11166699-11166748)
chr4 (171-219)||(14542745-14542793)
chr4 (187-238)||(29808269-29808318)
chr4 (192-255)||(29910455-29910516)
chr4 (189-248)||(42316827-42316884)
chr4 (180-219)||(3299088-3299127)
chr4 (185-255)||(6474433-6474501)
chr4 (187-249)||(20403169-20403229)
chr4 (186-248)||(35378187-35378247)
chr4 (189-255)||(56497611-56497675)
chr4 (185-239)||(56551591-56551643)
chr4 (169-219)||(3580742-3580792)
chr4 (192-248)||(4911607-4911660)
chr4 (169-219)||(22164252-22164302)
chr4 (177-234)||(26004647-26004701)
chr4 (177-219)||(29568614-29568656)
chr4 (169-219)||(33758787-33758837)
chr4 (185-219)||(37930846-37930880)
chr4 (192-241)||(39842018-39842065)
chr4 (169-219)||(47018309-47018358)
chr4 (184-237)||(49473657-49473708)
chr4 (169-219)||(49716922-49716972)
chr4 (169-219)||(50442731-50442780)
chr4 (185-219)||(52132301-52132335)
chr4 (169-214)||(1166600-1166645)
chr4 (169-214)||(1169082-1169127)
chr4 (189-238)||(16612650-16612698)
chr4 (200-248)||(29908057-29908103)
chr4 (189-241)||(30380538-30380588)
chr4 (200-248)||(36203237-36203283)
chr4 (187-239)||(43182994-43183044)
chr4 (187-219)||(9990294-9990326)
chr4 (192-239)||(12263262-12263307)
chr4 (189-248)||(12698598-12698655)
chr4 (177-217)||(41222073-41222113)
chr4 (192-239)||(46434766-46434811)
chr4 (179-246)||(56096207-56096272)
chr4 (177-248)||(56564974-56565043)
[»] chr2 (51 HSPs)
chr2 (185-255)||(24393239-24393307)
chr2 (185-255)||(34903511-34903579)
chr2 (187-248)||(40967372-40967431)
chr2 (185-248)||(2256972-2257033)
chr2 (193-248)||(16204824-16204877)
chr2 (169-248)||(24593377-24593454)
chr2 (184-239)||(43117188-43117241)
chr2 (177-255)||(7640652-7640728)
chr2 (177-239)||(12124555-12124615)
chr2 (185-235)||(12413507-12413555)
chr2 (185-235)||(12425567-12425615)
chr2 (169-255)||(19179033-19179117)
chr2 (177-239)||(28163937-28163997)
chr2 (189-255)||(40099387-40099450)
chr2 (169-241)||(9982633-9982701)
chr2 (188-256)||(35727430-35727496)
chr2 (170-219)||(43356526-43356575)
chr2 (188-239)||(5980237-5980286)
chr2 (182-241)||(9389476-9389533)
chr2 (169-248)||(27152354-27152431)
chr2 (177-248)||(39068699-39068768)
chr2 (185-256)||(39761431-39761499)
chr2 (177-239)||(12124694-12124754)
chr2 (177-239)||(25274820-25274880)
chr2 (169-239)||(28771592-28771660)
chr2 (177-219)||(3503002-3503044)
chr2 (185-246)||(9547408-9547467)
chr2 (185-219)||(10723967-10724001)
chr2 (171-217)||(19156149-19156195)
chr2 (187-248)||(37320518-37320577)
chr2 (185-219)||(42475109-42475143)
chr2 (192-248)||(10332281-10332335)
chr2 (187-255)||(19549430-19549496)
chr2 (185-214)||(25048837-25048866)
chr2 (187-220)||(35757401-35757434)
chr2 (177-213)||(2661031-2661067)
chr2 (201-248)||(4897544-4897589)
chr2 (201-248)||(4944938-4944983)
chr2 (184-239)||(7302140-7302192)
chr2 (177-217)||(8920518-8920558)
chr2 (185-236)||(11810381-11810430)
chr2 (185-217)||(12599864-12599896)
chr2 (177-248)||(18324885-18324954)
chr2 (189-248)||(20239344-20239401)
chr2 (177-248)||(20565066-20565135)
chr2 (184-239)||(25186240-25186293)
chr2 (201-248)||(26133535-26133580)
chr2 (169-248)||(28202298-28202375)
chr2 (185-248)||(31815886-31815947)
chr2 (168-247)||(32844865-32844941)
chr2 (188-239)||(35685063-35685112)
[»] scaffold0238 (1 HSPs)
scaffold0238 (169-254)||(25384-25467)
[»] chr8 (22 HSPs)
chr8 (169-248)||(30623294-30623371)
chr8 (178-250)||(9655989-9656059)
chr8 (192-247)||(8442493-8442546)
chr8 (177-255)||(9019555-9019631)
chr8 (169-255)||(19778059-19778143)
chr8 (177-238)||(41430763-41430822)
chr8 (183-255)||(8984491-8984561)
chr8 (185-239)||(1244704-1244756)
chr8 (187-217)||(13032363-13032393)
chr8 (177-248)||(24033257-24033329)
chr8 (187-248)||(27750905-27750964)
chr8 (169-219)||(29499799-29499849)
chr8 (169-219)||(41625222-41625272)
chr8 (187-248)||(42200663-42200722)
chr8 (192-248)||(29186503-29186557)
chr8 (185-241)||(32944839-32944893)
chr8 (186-219)||(38763515-38763548)
chr8 (187-239)||(42208470-42208520)
chr8 (185-248)||(6314322-6314383)
chr8 (188-239)||(9070968-9071017)
chr8 (170-214)||(10290803-10290847)
chr8 (185-232)||(32944942-32944987)
[»] chr1 (48 HSPs)
chr1 (185-248)||(28039859-28039920)
chr1 (172-219)||(22335386-22335433)
chr1 (169-255)||(47528430-47528514)
chr1 (170-255)||(16580783-16580866)
chr1 (185-256)||(18056715-18056784)
chr1 (169-255)||(23405341-23405425)
chr1 (169-216)||(41950067-41950114)
chr1 (186-219)||(29251782-29251815)
chr1 (177-241)||(29987103-29987165)
chr1 (188-236)||(30937488-30937534)
chr1 (172-256)||(38448852-38448934)
chr1 (187-238)||(10132445-10132494)
chr1 (189-248)||(15382822-15382879)
chr1 (169-248)||(19262890-19262967)
chr1 (177-248)||(33153871-33153940)
chr1 (177-219)||(2665293-2665336)
chr1 (184-239)||(3937520-3937575)
chr1 (187-240)||(5033551-5033603)
chr1 (185-220)||(5280658-5280693)
chr1 (185-255)||(6000142-6000210)
chr1 (170-248)||(9398397-9398473)
chr1 (169-239)||(9872088-9872156)
chr1 (177-239)||(13615603-13615663)
chr1 (185-255)||(17221519-17221587)
chr1 (169-239)||(30795711-30795779)
chr1 (184-219)||(33020041-33020076)
chr1 (169-259)||(34366282-34366370)
chr1 (169-246)||(912311-912386)
chr1 (177-219)||(29233965-29234007)
chr1 (169-219)||(32944764-32944814)
chr1 (187-248)||(34766861-34766920)
chr1 (187-248)||(35442856-35442915)
chr1 (185-219)||(35778200-35778234)
chr1 (204-256)||(1408428-1408478)
chr1 (170-219)||(3157701-3157750)
chr1 (187-255)||(9639818-9639884)
chr1 (192-240)||(16033456-16033502)
chr1 (192-248)||(28832177-28832231)
chr1 (186-219)||(30561751-30561784)
chr1 (188-256)||(45481486-45481552)
chr1 (186-219)||(46335059-46335092)
chr1 (200-248)||(49875613-49875659)
chr1 (187-219)||(13054901-13054933)
chr1 (169-248)||(17034780-17034857)
chr1 (176-239)||(29798106-29798167)
chr1 (189-248)||(34808566-34808623)
chr1 (187-219)||(41362647-41362679)
chr1 (188-239)||(42416813-42416862)
[»] chr6 (29 HSPs)
chr6 (170-248)||(404164-404240)
chr6 (169-219)||(12808897-12808947)
chr6 (169-219)||(35110082-35110132)
chr6 (172-241)||(10278461-10278528)
chr6 (178-238)||(28046170-28046228)
chr6 (186-246)||(31971532-31971590)
chr6 (178-248)||(17829300-17829368)
chr6 (169-241)||(6610085-6610153)
chr6 (177-219)||(21865425-21865467)
chr6 (189-219)||(30639429-30639459)
chr6 (185-241)||(2726416-2726470)
chr6 (179-236)||(3024575-3024632)
chr6 (203-251)||(6864150-6864196)
chr6 (192-248)||(14049890-14049944)
chr6 (188-248)||(15291692-15291750)
chr6 (200-248)||(18256884-18256930)
chr6 (187-239)||(33824891-33824941)
chr6 (192-239)||(334150-334195)
chr6 (184-255)||(3808116-3808185)
chr6 (189-248)||(4450263-4450320)
chr6 (186-256)||(7273043-7273112)
chr6 (184-255)||(8381192-8381261)
chr6 (169-239)||(12232164-12232233)
chr6 (185-248)||(15187064-15187125)
chr6 (185-248)||(15473481-15473542)
chr6 (185-248)||(20744139-20744200)
chr6 (201-248)||(28757039-28757084)
chr6 (171-219)||(28758275-28758323)
chr6 (185-248)||(29069484-29069545)
[»] scaffold0334 (1 HSPs)
scaffold0334 (177-219)||(5210-5252)
[»] scaffold0262 (1 HSPs)
scaffold0262 (184-248)||(15928-15990)
[»] scaffold0426 (1 HSPs)
scaffold0426 (169-248)||(5823-5900)
[»] scaffold0026 (1 HSPs)
scaffold0026 (189-248)||(75326-75383)
[»] scaffold1694 (1 HSPs)
scaffold1694 (187-239)||(165-215)
[»] scaffold0481 (1 HSPs)
scaffold0481 (169-214)||(4579-4624)
[»] scaffold0126 (1 HSPs)
scaffold0126 (200-248)||(34902-34948)
[»] scaffold0016 (1 HSPs)
scaffold0016 (192-240)||(99046-99092)
[»] scaffold1327 (1 HSPs)
scaffold1327 (169-248)||(557-634)
[»] scaffold0896 (1 HSPs)
scaffold0896 (169-217)||(3171-3218)
[»] scaffold0088 (1 HSPs)
scaffold0088 (178-241)||(48029-48090)


Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 35807573 - 35807879
Alignment:
Q  19 caaactactagtctcacattacttaggtagtgccaatgaatgctgaggttgcacttgtgtattgtctatatcaaaattggttcatctgaattcataaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35807573 caaactactagtctcacattacttaggtagtgccaatgaatgctgaggttgcacttgtgtattgtctatatcaaaattggttcatctgaattcataaggt 35807672  T
Q  119 ctagtctaaataattggaaacctatgattcattttgatttggatagggac-ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  35807673 ctagtctaaataattggaaacctatgggtcattttgatttggatagggactttttttattggtgttcggggttcgaacctcaaaccttgcatatattatg 35807772  T
Q  218 cacattgtccttatcaactgagtttagctcatggggacgatttggacagggactagtctaaatatactattacttgatgaataaagaataaattttatga 317  Q
    |||||||| |||| ||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35807773 cacattgttcttaccaactgag-------cttggggacgatttggacagggactagtctaaatatactattacttgatgaataaagaataaactttatga 35807865  T
Q  318 ataaattcatatca 331  Q
    ||||||||||||||    
T  35807866 ataaattcatatca 35807879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 40446038 - 40445991
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  40446038 gaacctcagaccttgcatatattatg--cattgtccttatcaactgagtt 40445991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 22499003 - 22498943
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  22499003 ggggttcgaacc-cagaccttgcatatattatg--cattgtccttaccaactgagttaagctca 22498943  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 42168931 - 42168996
Alignment:
Q  172 tttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||| |||||| ||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||||||    
T  42168931 tttggtggtgtctggggttcgaaccccagaccttgcatatactatg--cattgtccttaccaactgag 42168996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 781924 - 781864
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||| |||||||||||||| ||||  ||||||||| ||||||||||||| ||||||    
T  781924 gggttcgaaccccagaccttgcatattttat--acattgtccctatcaactgagttaagctca 781864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 8545003 - 8545049
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  8545003 gaccttgcatatattatgca--ttgtccttatcaactgagttaagctca 8545049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 23118053 - 23118111
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||| || ||||| |||||||||||||  |||||||||||||||||||| ||||||    
T  23118053 gttcgaaccccaaaccttacatatattatgca--ttgtccttatcaactgagttaagctca 23118111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 3222793 - 3222761
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatg 217  Q
    |||||||||||||||||||||||||||||||||    
T  3222793 ggggttcgaacctcagaccttgcatatattatg 3222761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 3671280 - 3671219
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||   |||||||||||||||||  ||||| ||||||||||||||||| ||||||    
T  3671280 ggggttcgaaccctggaccttgcatatattat--acattatccttatcaactgagttaagctca 3671219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 7630160 - 7630245
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacga 257  Q
    ||||| |||||||||| | ||||||||  |||| ||||||||||||||  ||||||| ||| || ||||||| |||||| ||||||||    
T  7630160 ttttttttggtgtttgagattcgaaccatagacattgcatatattatg--cattgtctttagcatctgagttaagctcacggggacga 7630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 8639344 - 8639389
Alignment:
Q  201 accttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||||    
T  8639344 accttgcatatatta--cacattgtccttatcaactgagttaagctca 8639389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 15889489 - 15889400
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacgattt 260  Q
    ||||||| ||||| | |||||| |||||  |||||||||||||||||||  |||||||| || |||||||| | |||||| | |||||||||    
T  15889489 ttttttggtggtggtcggggtttgaaccctagaccttgcatatattatg--cattgtccctaccaactgagctaagctcacgaggacgattt 15889400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 17145351 - 17145412
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggg 252  Q
    ||||||||||||| ||||||||||||||  |||||||| ||| |||||||||| |||| |||||    
T  17145351 ttcgaacctcagatcttgcatatattat--acattgtctttaccaactgagttaagcttatggg 17145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 31708127 - 31708179
Alignment:
Q  167 acttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||| ||||||  | |||||||||| ||||||||||||||||||||||    
T  31708127 acttttttggtggtgtccgaggttcgaaccccagaccttgcatatattatgca 31708179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 18147571 - 18147615
Alignment:
Q  202 ccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||||    
T  18147571 ccttgcatatattat--acattgtccttatcaactgagttaagctca 18147615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 790129 - 790198
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||||| |||||||||||||  ||||||||||||||| |  ||||||||  |||||||||||    
T  790129 ttttttggtggtgttcggggttcgaacctgcgaccttgcatatatt-tatacattgtctatatcaactgag 790198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 1642412 - 1642362
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||||| ||||||||||||  |||| |||||||||||||||||    
T  1642412 tttttttttggtgtctggggttcgaactccagatcttgcatatattatgca 1642362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 5107244 - 5107278
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||| ||||||||||||||||||||    
T  5107244 ggggttcgaacctcggaccttgcatatattatgca 5107278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 8882399 - 8882466
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||| ||||| | |||||| ||||||||||||||  |||| |||||||||||||| |||||| ||||||    
T  8882399 gggtttgaaccccggaccttacatatattatgcac--tgtcattatcaactgagttaagctcacggggac 8882466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 11017234 - 11017204
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||||||||||||||||||||    
T  11017234 ttcgaacctcagaccttgcatatattatgca 11017204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 16071394 - 16071440
Alignment:
Q  171 ttttgttggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    ||||| |||||| ||||||||||||| ||||||||||| ||||||||    
T  16071394 ttttggtggtgtatggggttcgaaccccagaccttgcacatattatg 16071440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 17144539 - 17144472
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    |||||||| ||||||||||||||||||||||  |||||| |||| || ||||||| || ||| |||||||    
T  17144539 ggttcgaatctcagaccttgcatatattatg--cattgttcttaacagctgagttaagttcacggggacg 17144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 18391660 - 18391601
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||| |||||||||||| |||||  ||||||||||| |||||||| | ||||||    
T  18391660 ggttcgaacctcggaccttgcatattttatg--cattgtccttaccaactgagctaagctca 18391601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 2475341 - 2475386
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| ||||||||||||||  |||||||||||||||    
T  2475341 ttttttggtggtgtctggggttcgaacctgggaccttgcatatatt 2475386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 4374924 - 4374969
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| |||||||||||||  ||||||||||||||||    
T  4374924 ttttttggtggtgtctggggttcgaacccgagaccttgcatatatt 4374969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 5589534 - 5589579
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| ||||||||||||||  |||||||||||||||    
T  5589534 ttttttggtggtgtctggggttcgaacctgggaccttgcatatatt 5589579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 6928427 - 6928472
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| ||||||||||||||  |||||||||||||||    
T  6928427 ttttttggtggtgtctggggttcgaacctgggaccttgcatatatt 6928472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 11647255 - 11647205
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||||| || |||||||||||||||||  ||||||||||| ||||||||||    
T  11647255 ttcgaaccccaaaccttgcatatattatg--cattgtccttaccaactgagtt 11647205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 25607060 - 25607106
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaact 236  Q
    ||||||||| ||||||||||||||||||||  ||||||| |||||||||    
T  25607060 gttcgaaccccagaccttgcatatattatg--cattgtctttatcaact 25607106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 39914971 - 39914902
Alignment:
Q  176 ttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| | |||||||||||| | ||||||||||||||||||  ||||||||||| ||| |||||| ||||||    
T  39914971 ttggtggtcggggttcgaacc-cggaccttgcatatattatg--cattgtccttaccaattgagttaagctca 39914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 2705518 - 2705567
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||||||||||||| |||||||||||   ||||| |||||||||||||    
T  2705518 gttcgaacctcagaccttacatatattatg--tattgttcttatcaactgag 2705567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 6489069 - 6489008
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||| ||||||||||||||||||||  |||||||| || |||||||| | ||||||    
T  6489069 ggggtttgaaccccagaccttgcatatattatg--cattgtccctaccaactgagctaagctca 6489008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 16133072 - 16133125
Alignment:
Q  193 aacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  16133072 aacctctgaccttgcatatattatg--cattgtccttaccaactgagctaagctca 16133125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 17465396 - 17465428
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||| ||||||||||||||||||||||    
T  17465396 ggttcgaaccccagaccttgcatatattatgca 17465428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 25603983 - 25604060
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||   ||| |||||||| |  ||||||||||||||||||||  ||||| ||||||||||| | ||||||    
T  25603983 ttttttgttggtggccgggattcgaaccccgaaccttgcatatattatgcac--tgtccatatcaactgagctaagctca 25604060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 27479631 - 27479684
Alignment:
Q  187 ggttcgaacctcagaccttgcata-tattatgcacattgtccttatcaactgagtt 241  Q
    |||||||||| ||||||||||||| ||||||  ||||||| |||||||||||||||    
T  27479631 ggttcgaaccccagaccttgcatattattat--acattgtacttatcaactgagtt 27479684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 32200430 - 32200507
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||| | |||| | ||||| | ||||||||||||||||||  |||||||| | ||||||||| | ||||||    
T  32200430 ttttttgttggtggtcggggcttgaaccccggaccttgcatatattatg--cattgtccctgtcaactgagctaagctca 32200507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 34702548 - 34702491
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| | |||||| |||||||||||||  ||||||||| |||||||||| ||||||    
T  34702548 ttcgaaccccggacctttcatatattatgca--ttgtccttaccaactgagttaagctca 34702491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 35109458 - 35109401
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||| ||||||||||||||||||   |||||| ||| |||||||||| ||||||    
T  35109458 ttcgaacctcggaccttgcatatattatg--tattgtctttaccaactgagttaagctca 35109401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 43108615 - 43108570
Alignment:
Q  201 accttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  43108615 accttgcatatattatgca--ttgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 21914054 - 21914138
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||| || ||||| |||||||||||| || |||||||||||||||||  ||||||||||| |||||||||| |||||||||||||    
T  21914054 ttttttttttgtgttaggggttcgaaccccataccttgcatatattatg--cattgtccttaccaactgagttaagctcatggggac 21914138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 45096096 - 45096020
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| | || ||||||||||    
T  45096096 tggtgtctggggttcgaaccacagaccttgcatatattatg--cattgtccttatcaactgagctaagttcatggggac 45096020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 25505701 - 25505768
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||  ||||||||| |||||||||||||    
T  25505701 gggttcgaaccccagaccttgcatatattatg--cattgtccttacaaactgagttaagctcatggggac 25505768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 30200904 - 30200827
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| |||||||  ||||||||||||||| |||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  30200904 tttttttttggtgtccggggttcgaacctcaaaccttgcatatattatg--cattgtccttagcaactgagctaagctca 30200827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 35191800 - 35191868
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||  ||||| ||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||    
T  35191800 ttttttggcggtgtctggggttcgaaccccagaccttgcatatattatg--cattgtccttaccaactgag 35191868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 17588426 - 17588356
Alignment:
Q  183 ttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||| |||||||| |||| |||||||||||||||  ||||||||||| |||||||||| |||||| ||||||    
T  17588426 ttgggattcgaaccccagatcttgcatatattatg--cattgtccttaccaactgagttaagctcacggggac 17588356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 41990575 - 41990615
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  41990575 tggtgtttggggttcgaacctcggaccttgcatatattatg 41990615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 53208031 - 53207964
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||||||| ||||||||||||||||||||  ||||| ||||| |||||||| | |||||| ||||||    
T  53208031 gggttcgaaccccagaccttgcatatattatg--cattgcccttaccaactgagctaagctcacggggac 53207964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 1111824 - 1111894
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||||| ||| | |||||| ||||| ||||||||||||||||||||   ||||||| |||||||||||||    
T  1111824 ttttttgtttgtggtcggggtttgaaccccagaccttgcatatattatg--tattgtccctatcaactgagtt 1111894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 27397611 - 27397665
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||||||||| ||||||||||||||||||  ||||||||| || ||||||||||    
T  27397611 ggggttcgaaccttagaccttgcatatattat--acattgtccataccaactgagtt 27397665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 39100420 - 39100478
Alignment:
Q  190 tcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatg 250  Q
    |||||||||| |||||| ||||||||||||  |||| ||||||||||||||| ||||||||    
T  39100420 tcgaacctcaaaccttgtatatattatgca--ttgttcttatcaactgagttaagctcatg 39100478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 51250215 - 51250293
Alignment:
Q  168 cttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||  ||||| | |||||| |||| |||| |||||||||||||||  |||||||||||| |||||||||| ||||||    
T  51250215 ctttttttgtggtgatcggggtttgaacttcaggccttgcatatattat--acattgtccttaccaactgagttaagctca 51250293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 13042791 - 13042860
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||||||| | |||||||||||||||||  | |||||| ||| |||||||| | ||||||    
T  13042791 tggtgtttggggttcgaaccccggaccttgcatatattat--aaattgtctttaccaactgagctaagctca 13042860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 13050868 - 13050937
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||||||| | |||||||||||||||||  | |||||| ||| |||||||| | ||||||    
T  13050868 tggtgtttggggttcgaaccccggaccttgcatatattat--aaattgtctttaccaactgagctaagctca 13050937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 20400155 - 20400107
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    |||||| ||||| | ||||||| ||||||||||||||||||||||||||    
T  20400155 tttttttttggtatctggggtttgaacctcagaccttgcatatattatg 20400107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 38573556 - 38573633
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| ||||||  |||||||||| |  |||||||| ||||||||||  |||||| ||||||||||||||| ||||||    
T  38573556 ttttttggtggtgtccggggttcgaatcctagaccttgtatatattatg--cattgttcttatcaactgagttaagctca 38573633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 1149069 - 1149129
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||  |||||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  1149069 gggttcgaaccctagaccttgcatatattatg--cattgtccttaccaactgagctaagctca 1149129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 1456546 - 1456590
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||    
T  1456546 gaacctcagaccttgcatatattat--acattgtccctatcaactga 1456590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 4216383 - 4216450
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||||   ||||||||||| | ||||||||||||||||||  ||||||||||||||||||||    
T  4216383 ttttttggtggtgtccagggttcgaacccc-gaccttgcatatattatg--cattgtccttatcaactgag 4216450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 7101777 - 7101823
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  7101777 tttttggtggtgtttggggttcgaa-ctcggaccttgcatatattatg 7101823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 219
Target Start/End: Complemental strand, 42074162 - 42074131
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||||||||||||||||||||||    
T  42074162 gttcgaacctcagaccttgcatatattatgca 42074131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 54230098 - 54230150
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||||||| || |||||||||||||||||  ||||||||||| ||||||||    
T  54230098 ggggttcgaaccccaaaccttgcatatattatg--cattgtccttaccaactgag 54230150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 55126076 - 55126000
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||| ||||||| |||||||  |||||||||||||||||   |||||||| |||||||||| | |||||| ||||||    
T  55126076 tggtgtctggggtttgaacctcgaaccttgcatatattatg--tattgtcctcatcaactgagctaagctcacggggac 55126000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 5702179 - 5702245
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    ||||||||||||| |||||||||||||||||  |||||| |||| |||||||| | |||||| |||||||    
T  5702179 ggttcgaacctcaaaccttgcatatattatg--cattgt-cttaccaactgagctaagctcacggggacg 5702245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 8075847 - 8075813
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||||||||||||||||||||||||||    
T  8075847 ggggtttgaacctcagaccttgcatatattatgca 8075813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 8139773 - 8139743
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||||||||||||||||||||    
T  8139773 ttcgaacctcagaccttgcatatattatgca 8139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 13829076 - 13829110
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||| ||||||||||||||||||||||    
T  13829076 ggggttcgaaccccagaccttgcatatattatgca 13829110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 14771389 - 14771359
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||||||||||||||||||||    
T  14771389 ttcgaacctcagaccttgcatatattatgca 14771359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 33771737 - 33771682
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacga 257  Q
    |||||||||||||||||  |||||||||||| |||||||||| |||||| | ||||||    
T  33771737 gaccttgcatatattat--acattgtccttaccaactgagttaagctcacgaggacga 33771682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 34899175 - 34899125
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||| | |||||| ||||| | ||||||||||||||||||||    
T  34899175 ttttttgttggtggtcggggtttgaaccccggaccttgcatatattatgca 34899125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 39869810 - 39869869
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatg 250  Q
    |||||||||| ||||||| ||||||||||  ||||||||||| |||||||||| | ||||||    
T  39869810 ttcgaacctcggaccttgtatatattatg--cattgtccttaccaactgagttaaactcatg 39869869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 45885476 - 45885510
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||||||||||||||||||||||||||    
T  45885476 ggggtttgaacctcagaccttgcatatattatgca 45885510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 46226008 - 46226058
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| |||||||| |||||||||||  | ||||||||||||||||||||    
T  46226008 tttttttttggtgttcggggttcgaactccggaccttgcatatattatgca 46226058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 53681877 - 53681944
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||||||| | |||||||||||||||  |||||| |||| |||||||| | |||||| ||||||    
T  53681877 gggttcgaacctcaaatcttgcatatattatg--cattgttcttaccaactgaggtaagctcacggggac 53681944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 7829954 - 7829904
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||| ||||||||| |||||||||||  |||||||| |||||||||||||    
T  7829954 ttcgaacttcagaccttacatatattatg--cattgtccatatcaactgagtt 7829904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 12976605 - 12976655
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||| | ||||||||||||||||||||  |||||||| |||||||||||||    
T  12976605 ttcgaatcccagaccttgcatatattatg--cattgtccctatcaactgagtt 12976655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 21513351 - 21513289
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||| |||||||| ||||||||||||| ||||||  ||||||||||| |||||||| | ||||||    
T  21513351 tgggattcgaaccccagaccttgcataaattatg--cattgtccttaccaactgagctaagctca 21513289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 22462352 - 22462306
Alignment:
Q  207 catatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||||||  |||||||||||||||||||| |||||| ||||||    
T  22462352 catatattatgca--ttgtccttatcaactgagttaagctcacggggac 22462306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 30269151 - 30269196
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| |||||||||||||  ||||||||||||||||    
T  30269151 ttttttggtggtgtctggggttcgaacccgagaccttgcatatatt 30269196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 41990832 - 41990877
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||||||||||  |||||||||||||  |||||||||||||||    
T  41990832 ttttttgttggtgtccggggttcgaacctgcgaccttgcatatatt 41990877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 43796819 - 43796897
Alignment:
Q  168 cttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||  ||||||  ||| |||||||||||||| |||||| ||||||  ||||||||| || |||||||||| ||||||    
T  43796819 ctttttttatggtgtcagggattcgaacctcagactttgcatgtattat--acattgtccataccaactgagttaagctca 43796897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 46253897 - 46253930
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||||||||||||||||| ||||||    
T  46253897 gggttcgaacctcagaccttgcatatactatgca 46253930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 5117266 - 5117209
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||| ||||| |||||||||||   ||||||||||||||||||| | ||||||    
T  5117266 ttcgaacctcaaaccttacatatattatg--tattgtccttatcaactgagctaagctca 5117209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 6835850 - 6835886
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcaca 221  Q
    ||||||||||||  |||||||||||||||||||||||    
T  6835850 ggggttcgaaccctagaccttgcatatattatgcaca 6835886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 19468509 - 19468452
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| | ||||||||||||||||||  |||||||| || |||||||||| ||||||    
T  19468509 ttcgaaccacggaccttgcatatattatg--cattgtccataccaactgagttaagctca 19468452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 23147969 - 23148038
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||||||||| | ||||| ||||||||||||   |||||||||| |||||||| | ||||||    
T  23147969 tggtgttcggggttcgaaccccggacctcgcatatattatg--tattgtccttaccaactgagctaagctca 23148038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 24273685 - 24273653
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatg 217  Q
    ||||||| |||||||||||||||||||||||||    
T  24273685 ggggttcaaacctcagaccttgcatatattatg 24273653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 33745162 - 33745093
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| ||||| |||||||||||||| |||||  |||||||| |||||| |||| | |||||| ||||||    
T  33745162 tggggtttgaaccccagaccttgcatattttatg--cattgtccatatcaattgagctaagctcacggggac 33745093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 38130958 - 38131019
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||| | ||||||||||||||||||  |||||||| || |||||||||| ||||||    
T  38130958 ggggtttgaaccccggaccttgcatatattatg--cattgtccataccaactgagttaagctca 38131019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 49975811 - 49975864
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctc 247  Q
    ||||| ||||||||||||||||||||  |||||||| || |||||||||| |||||    
T  49975811 gaaccccagaccttgcatatattatg--cattgtccataacaactgagttaagctc 49975864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 52119438 - 52119377
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||| |  |||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  52119438 ggggttcgaaccccgaaccttgcatatattatg--cattgtccttaccaactgagctaagctca 52119377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 53996357 - 53996300
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| ||||||||||||||||||||  |||||||| || |||||||| | ||||||    
T  53996357 ttcgaaccccagaccttgcatatattatg--cattgtccataccaactgagctaagctca 53996300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 6384929 - 6384852
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||| | ||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||| ||||||    
T  6384929 ttttttggtggtgtctagggttcgaaccccagaccttgcatatattatg--cattgtccttattaactgagttaagctca 6384852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 40187619 - 40187703
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| ||||||| |||||| ||||| |||||||| |||||||||||  |||||||| || |||||||||| |||||||| ||||    
T  40187619 ttttttggtggtgttcggggtttgaaccgcagaccttacatatattatg--cattgtccctaccaactgagttaagctcatgaggac 40187703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 20103436 - 20103514
Alignment:
Q  168 cttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| |||||| ||||||||||||| | ||||||| | ||||||||  ||||||||||| |||||||||| ||||||    
T  20103436 cttttttggtggtgtctggggttcgaaccccggaccttgtaaatattatg--cattgtccttaccaactgagttaagctca 20103514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 31533393 - 31533446
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||||| || ||||||||||||||||| | |||||||||||||||||||    
T  31533393 gggttcgaaccccaaaccttgcatatattatgtatattgtccttatcaactgag 31533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 38911358 - 38911293
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||| ||| ||||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  38911358 gttcgaacttcaaaccttgcatatattat--acattgtctttatcaactgagttaagctcacggggac 38911293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 41250038 - 41250114
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| |||| | ||||||| |||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||    
T  41250038 tggtgttcggggcttgaacctcggaccttgcatatattat--acattgttcttatcaactgagctaaactcatggggac 41250114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 7872748 - 7872799
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||    
T  7872748 gggttcgaaccccagaccttgcatatattatg--cattgtccttaccaactgag 7872799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 19793591 - 19793532
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    |||||||||||||||||||| |||||||| ||||||||||  |||||||||||  |||||||    
T  19793591 tggtgtttggggttcgaaccccagaccttacatatattat--acattgtcctttccaactga 19793532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 31723398 - 31723457
Alignment:
Q  180 tgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||||| ||||||||||||| ||||||||||||||  | ||||| |||||||||||||||    
T  31723398 tgtttgggtttcgaacctcagatcttgcatatattat--atattgttcttatcaactgagtt 31723457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 37235391 - 37235312
Alignment:
Q  167 acttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||| ||||| | ||||||| ||| ||||||||||||||||| |||  |||||||| |||||||||| || ||||||    
T  37235391 acttttttggtggtggtcggggttcaaacttcagaccttgcatatatcatg--cattgtccatatcaactgaattaagctca 37235312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 46987165 - 46987087
Alignment:
Q  168 cttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| | ||||||  |||||||||||| | ||||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  46987165 ctttttgggtggtgtccggggttcgaaccccggaccttgcatatattatg--cattgtccttaccaactgagctaagctca 46987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 35142148 - 35142209
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||| || ||||||||||||||  |||||||| ||||||||||| | ||||||    
T  35142148 ggggttcgaacctcaaactttgcatatattatg--cattgtccatatcaactgagctaagctca 35142209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 2618757 - 2618689
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| |||||| || | |||||||| | ||||||||||||||||||  ||||||||||| ||||||||    
T  2618757 ttttttggtggtgtatgagattcgaaccccggaccttgcatatattatg--cattgtccttaccaactgag 2618689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 2916164 - 2916096
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||| | ||||||||||||||||||||  |||||||| || |||||||||| || ||| ||||||    
T  2916164 ggggttcgaatcccagaccttgcatatattatg--cattgtccgtaccaactgagttaaggtcacggggac 2916096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 6768689 - 6768740
Alignment:
Q  168 cttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||| ||||||  | | |||||||||||||||||||||||||||||||    
T  6768689 cttttttgatggtgtccgagattcgaacctcagaccttgcatatattatgca 6768740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 10424039 - 10423971
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||||||||   |||||||||||||||||||||  ||||||||||  | |||||||||| |||||||    
T  10424039 ttttttgttggtggccggggttcgaacctcagaccttatatatattatg--cgttgtccttatgaactgag 10423971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 18714526 - 18714458
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||||  |||||| ||||| | ||||||||||||||||||  ||||||||||| ||||||||    
T  18714526 ttttttggtggtgtacggggtttgaaccccggaccttgcatatattatg--cattgtccttaccaactgag 18714458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 25923454 - 25923419
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||| |||||||||||||||||||||||||||    
T  25923454 tggggttcaaacctcagaccttgcatatattatgca 25923419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 35165593 - 35165541
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||||||||||||||| |||||||||||   |||||| ||||||||||||||    
T  35165593 ggttcgaacctcagaccttacatatattatg--tattgtcgttatcaactgagtt 35165541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 20085750 - 20085792
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||| ||||| | ||||||||||||||||||||    
T  20085750 tggtgtttggggtttgaaccccggaccttgcatatattatgca 20085792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 21050223 - 21050282
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| | ||||||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  21050223 ggttcgaaacccagaccttgcatatattatg--cattgtccttaccaactgagctaagctca 21050282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 1399232 - 1399170
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||| || ||||||||| |||||||||||||||||| |||  |||||||| || ||||||||||    
T  1399232 tggtggttagggttcgaatctcagaccttgcatatatcatg--cattgtccataccaactgagtt 1399170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 10236888 - 10236958
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||| ||||||  ||||||||||||||  |||||||||| ||||||  |||||| |||| ||||||||||    
T  10236888 ttttttggtggtgtccggggttcgaacctcgaaccttgcatacattatg--cattgttcttaccaactgagtt 10236958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 23639482 - 23639527
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| |||||||||||||  ||||||||||||||||    
T  23639482 ttttttggtggtgtctggggttcgaacccgagaccttgcatatatt 23639527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 30296388 - 30296334
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||| |||||||||||||||||||  |||||||||||| |||||||| | ||||||    
T  30296388 gaaccccagaccttgcatatattat--acattgtccttaccaactgagctaagctca 30296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 37230034 - 37230088
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||| ||||||||||||||||||||  |||| |||||| |||||||||| ||||||    
T  37230034 gaaccccagaccttgcatatattatg--cattttccttaccaactgagttaagctca 37230088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 37669336 - 37669381
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| ||||||||||||||||||||   |||||||||||||||    
T  37669336 ttttttggtggtgtttggggttcgaacccaggaccttgcatatatt 37669381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 43156198 - 43156153
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| ||||||||||||||||||||   |||||||||||||||    
T  43156198 ttttttggtggtgtttggggttcgaacccgggaccttgcatatatt 43156153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 48527237 - 48527191
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||||||    
T  48527237 gaccttgcatatattatgca--ttgtccttatcaactgagataagctca 48527191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 3532649 - 3532609
Alignment:
Q  179 gtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||||||||| | || |||||||||||||||    
T  3532649 gtgtttggggttcgaacctcggcccctgcatatattatgca 3532609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 3532995 - 3533059
Alignment:
Q  172 tttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||| |||||| ||||||||||||| || |||||||||||||||||  |||||||||||  |||||||    
T  3532995 tttggtggtgtatggggttcgaacc-cataccttgcatatattatg--cattgtccttactaactgag 3533059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 5458062 - 5458131
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| | |||| ||| | ||||||||||||||||||||  |||||| ||||||||||||| | ||||||    
T  5458062 tggtgttcgaggtttgaatcccagaccttgcatatattatg--cattgttcttatcaactgagctaagctca 5458131  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 5579755 - 5579694
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| || |||||||| | ||||||    
T  5579755 ggggtttgaaccccagaccttgcatatattatgcac--tgtccctaccaactgagctaagctca 5579694  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 22777373 - 22777410
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  22777373 gaccttgcatatattatg--cattgtccttatcaactgag 22777410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 23069840 - 23069888
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    ||||||| ||||||  |||||||||||| || |||||||||||||||||    
T  23069840 ttttttggtggtgtccggggttcgaaccccataccttgcatatattatg 23069888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 27545004 - 27544951
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||||||||||  |||||||||||| |||||||| | |||||| ||||||    
T  27545004 gaccttgcatatattat--acattgtccttaccaactgagataagctcacggggac 27544951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 39801784 - 39801707
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| ||||| |||||||||| ||| | || |||||||||||||||  |||||||| || |||||||| | ||||||    
T  39801784 ttttttggtggtggttggggttcgtaccccggatcttgcatatattatg--cattgtccataccaactgagctaagctca 39801707  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 39926529 - 39926598
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||| |||| ||||| |  || ||||||||||||||||  |||||||||||||||||| | ||||||    
T  39926529 tggtgtttgaggtttgaaccccgaacattgcatatattatgca--ttgtccttatcaactgagctaagctca 39926598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 41029330 - 41029273
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| | |||||||||||||||||  |||||||||||| |||||||| | ||||||    
T  41029330 ttcgaaccccggaccttgcatatattat--acattgtccttaccaactgagctaagctca 41029273  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 48007530 - 48007607
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| ||||||   |||||| |||  ||||||||||||||||||||  ||||||| ||| |||||||||| ||||||    
T  48007530 ttttttggtggtgtcctgggttcaaactccagaccttgcatatattatg--cattgtcattaccaactgagttaagctca 48007607  T

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Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 7371531 - 7371608
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||  |||||||||||| | ||||||||||||||||||   ||||||||||||||||||||| ||||||    
T  7371531 ttttttgttggtgtccggggttcgaaccccggaccttgcatatattatg--tattgtccttatcaactgagttaagctca 7371608  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 46676481 - 46676565
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| |||||| ||||| ||||||| | ||||||||||||||||||  ||||||||||| |||||||| | |||||||||||||    
T  46676481 ttttttggtggtgtctgggggtcgaaccccggaccttgcatatattatg--cattgtccttaccaactgagctaagctcatggggac 46676565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 17216120 - 17216189
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| |||||||||||| |||||||||||||||||||||  |||| | ||||||||||||| ||||||||    
T  17216120 tggtgtctggggttcgaacttcagaccttgcatatattatg--cattattcttatcaactgagcttagctca 17216189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 19908754 - 19908693
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  19908754 ggggttcgaacctcggaccttgcatatattatg--cattgtccttaccaactgagttaagctca 19908693  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 11269772 - 11269688
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| |||||| |||||||||||||  |||||||||||||||||||   |||||||||| ||||| |||| |||||| ||||||    
T  11269772 ttttttggtggtgtctggggttcgaacccaagaccttgcatatattatg--tattgtccttaccaactaagttaagctcacggggac 11269688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 18635608 - 18635524
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||  ||||| |||| ||| |||| ||||||||| ||||||||||||  |||||||||||||||||||| |||||| ||||||    
T  18635608 ttttttggcggtgtctgggattcaaaccccagaccttgtatatattatgca--ttgtccttatcaactgagttaagctcacggggac 18635524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 19124622 - 19124682
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||||    
T  19124622 gggttcgaacctcagaccttgcatatattatg--tattgtctttatcaactgagttaagctca 19124682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 24785461 - 24785528
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatgggga 254  Q
    |||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||| |||||||| |||||    
T  24785461 ggggttcgaaccccagaccttgtatatattatg--cattgtccttaccaactgagcttagctcacgggga 24785528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 24822805 - 24822738
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatgggga 254  Q
    |||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||| |||||||| |||||    
T  24822805 ggggttcgaaccccagaccttgtatatattatg--cattgtccttaccaactgagcttagctcacgggga 24822738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 47806239 - 47806289
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  47806239 ttttttggtggtgttcggggttcgaaccccagaccttgcatatattatgca 47806289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 11144648 - 11144734
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacga 257  Q
    ||||||| ||||||  ||||||| |||| ||||||||||||||||||||  ||||||| |||||||||||| | || ||||| ||||||    
T  11144648 ttttttggtggtgtccggggttcaaaccccagaccttgcatatattatg--cattgtctttatcaactgaggtaagttcatgaggacga 11144734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 38416127 - 38416058
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||| ||||||||||| |||||||||||||||||  |||| |||||| |||||||| | ||||||    
T  38416127 tggtgtttgggattcgaacctcataccttgcatatattatg--cattatccttaccaactgagctaagctca 38416058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 43034341 - 43034402
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||||||||||||||||||||||||  |||||||| || |||||||||| ||||||    
T  43034341 ggggtttgaacctcagaccttgcatatattatg--cattgtccataccaactgagttaagctca 43034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 1701685 - 1701619
Alignment:
Q  171 ttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    ||||| |||||| || |||||||||||| ||||||||||||||||||||  || ||||||||||||||    
T  1701685 ttttggtggtgtctgaggttcgaacctcggaccttgcatatattatgca-tttatccttatcaactga 1701619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 25978387 - 25978312
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||| |||| |||||||||| ||||||||||||||||||  ||||||||||| |||||||| | |||||| ||||||    
T  25978387 tggtgtctgggattcgaacctcggaccttgcatatattatg--cattgtcctta-caactgagctaagctcacggggac 25978312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 44221508 - 44221448
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||||||||||||||  |||||||| || ||||||| || ||||||    
T  44221508 gggttcgaacctcagaccttgcatatattatg--cattgtccataccaactgaattaagctca 44221448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 37800909 - 37800859
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||| | |||||||||||| ||||||| ||||||||||||||    
T  37800909 ttttttgttggtgatcggggttcgaaccccagacctcgcatatattatgca 37800859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 49308881 - 49308830
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||||| ||||||||||||||||||||  |||||||||| |||||||||    
T  49308881 gggttcgaaccccagaccttgcatatattatg--cattgtccttgtcaactgag 49308830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 22630344 - 22630393
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||| | |||||| ||||||||||||||||||||||||||||    
T  22630344 tttttgatggtggtcggggtttgaacctcagaccttgcatatattatgca 22630393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 11166748 - 11166699
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaact 236  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||| |||||    
T  11166748 ggggttcgaaccttagaccttgcatatattat--acattgtccttaccaact 11166699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 14542745 - 14542793
Alignment:
Q  171 ttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  14542745 ttttggtggtgttcagggttcgaaccccagaccttgcatatattatgca 14542793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 29808269 - 29808318
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    |||||||||| || |||||||||||||||||  |||||||||||||||||||    
T  29808269 ggttcgaaccccataccttgcatatattatg--cattgtccttatcaactga 29808318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 29910516 - 29910455
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||| ||||| |||||||||||||||||  ||||||||||||| |||||| |||||| ||||||    
T  29910516 gaacttcagatcttgcatatattatgca--ttgtccttatcaattgagttaagctcacggggac 29910455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 42316827 - 42316884
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||| |||||||||||||||||||||  |||| ||| |||||||||| ||||||    
T  42316827 ttcgaacctcggaccttgcatatattatgcac--tgtctttaccaactgagttaagctca 42316884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 3299088 - 3299127
Alignment:
Q  180 tgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  3299088 tgtttggggtttgaacctcaaaccttgcatatattatgca 3299127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 6474501 - 6474433
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||||| |||||||||| ||||| |||  |||||||||| ||||||||| | |||||| ||||||    
T  6474501 ggggttcgaaccccagaccttgcttatatgatg--cattgtccttgtcaactgagctaagctcacggggac 6474433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 20403169 - 20403229
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcat 249  Q
    ||||||||| |||||||||||||||||||||  |||||| | ||||||||||| | |||||||    
T  20403169 ggttcgaacttcagaccttgcatatattatg--cattgttcctatcaactgagctaagctcat 20403229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 35378187 - 35378247
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| | |||| |||||||||||||||  ||||||||||||||||| |||||| ||||||    
T  35378187 gggttcggatctcataccttgcatatatta--cacattgtccttatcaattgagttaagctca 35378247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 56497611 - 56497675
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||| |||| | |||||| ||||||    
T  56497611 ttcgaaccccagaccttgcatatattatg--cattgtccttaccaattgagctaagctcacggggac 56497675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 56551591 - 56551643
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||| ||||||||    
T  56551591 ggggtttgaacctcggaccttgcatatattatg--cattgtccttaccaactgag 56551643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 3580792 - 3580742
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| ||||||  |||||||||| | ||||||||||||||||||||||    
T  3580792 ttttttggtggtgtccggggttcgaatcccagaccttgcatatattatgca 3580742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 4911607 - 4911660
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||| |||||||||||||   | ||||||||||||||||| ||||||    
T  4911607 gaacctcagaccttacatatattatgca---tatccttatcaactgagttaagctca 4911660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 22164252 - 22164302
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||| | |||||| ||||| |||||||| |||||||||||||    
T  22164252 ttttttgttggtggtcggggtttgaaccccagaccttacatatattatgca 22164302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 26004701 - 26004647
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaa 234  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||  ||||||||||||    
T  26004701 tggtgtttggagttcgaatctca-accttgcatatattatgcac--tgtccttatcaa 26004647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 29568656 - 29568614
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  29568656 tggtgtctggggttcgaacctcggaccttacatatattatgca 29568614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 33758787 - 33758837
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| ||||| ||||| ||  |||||||||||||||||||||||||||    
T  33758787 ttttttggtggtggttgggatttaaacctcagaccttgcatatattatgca 33758837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 37930846 - 37930880
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||||||||||||||||||||||||||    
T  37930846 ggggtttgaacctcagaccttgcatatattatgca 37930880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 39842018 - 39842065
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||||| ||||| |||||||||||||  ||||||||||||||||||||    
T  39842018 gaacctcaaaccttacatatattatgca--ttgtccttatcaactgagtt 39842065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 47018358 - 47018309
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||    
T  47018358 ttttttttttgtgtttggggttcgaacct-ggaccttgcatatattatgca 47018309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 49473708 - 49473657
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactg 237  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||| ||||||    
T  49473708 tggggttcgaaccccggaccttgcatatattatg--cattgtccttaccaactg 49473657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 49716922 - 49716972
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| |||||||  |||||| |||||||| |||||||||||||||||||    
T  49716922 tttttttttggtgtccggggttagaacctcaaaccttgcatatattatgca 49716972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 50442731 - 50442780
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| |||||| |||| |||||||| ||||||||||||||||||||||    
T  50442731 ttttttggtggtgtctgggattcgaacc-cagaccttgcatatattatgca 50442780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 52132301 - 52132335
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||| ||||||||||||||||||||||    
T  52132301 ggggttcgaaccacagaccttgcatatattatgca 52132335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 1166645 - 1166600
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| ||||||||||||||  |||||||||||||||    
T  1166645 ttttttggtggtgtctggggttcgaacctgggaccttgcatatatt 1166600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 1169127 - 1169082
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| |||||| ||||||||||||||  |||||||||||||||    
T  1169127 ttttttggtggtgtctggggttcgaacctgggaccttgcatatatt 1169082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 16612698 - 16612650
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    |||||||||| ||||||||||||||| ||||  |||||||||||||||||    
T  16612698 ttcgaacctcggaccttgcatatattctgca-tttgtccttatcaactga 16612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 29908103 - 29908057
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  29908103 gaccttgcatatattatgca--ttgtccttaccaactgagttaagctca 29908057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 30380588 - 30380538
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||||| || ||||||||||||||||  |||||||||||| ||||||||||    
T  30380588 ttcgaaccccaaaccttgcatatattat--acattgtccttaccaactgagtt 30380538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 36203283 - 36203237
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||||||    
T  36203283 gaccttgcatatattatgca--ttgtccttatcaactgagctaagctca 36203237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 43182994 - 43183044
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||| ||||| |||||||||||||||||||  ||||||| ||||||||||||    
T  43182994 ggttcaaaccttagaccttgcatatattatg--cattgtctttatcaactgag 43183044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 9990326 - 9990294
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||||| |||||||||||||||||    
T  9990326 ggttcgaacctcagatcttgcatatattatgca 9990294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 12263307 - 12263262
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||||||||| ||||||||||  ||||||||||| |||||||||    
T  12263307 gaacctcagaccttacatatattat--acattgtccttgtcaactgag 12263262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 12698655 - 12698598
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| ||||||||||||||||||||  ||||||||  |||||||||| | ||||||    
T  12698655 ttcgaaccccagaccttgcatatattatg--cattgtccaaatcaactgagctaagctca 12698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 41222073 - 41222113
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    |||||| ||||||||||||||| ||||||||||||| ||||    
T  41222073 tggtgtctggggttcgaacctcggaccttgcatatactatg 41222113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 46434766 - 46434811
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  46434766 gaacctcaaaccttacatatattatg--cattgtccttatcaactgag 46434811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 56096272 - 56096207
Alignment:
Q  179 gtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagct 246  Q
    |||||||| ||| ||||| |  ||||| |||||||||||||  |||||||||||||||||||| ||||    
T  56096272 gtgtttggagtttgaaccacgaaccttacatatattatgca--ttgtccttatcaactgagttaagct 56096207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 56564974 - 56565043
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| ||||||||||||  ||||||||||||| |||||  |||||||| |||||| |||| | ||||||    
T  56564974 tggtgttcggggttcgaaccctagaccttgcatattttatg--cattgtccatatcaattgagctaagctca 56565043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 24393307 - 24393239
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| |||||||| | |||||| ||||||    
T  24393307 ggggttcgaacctcagaccttgcatatattatg--cattgtccttaacaactgagctaagctcacggggac 24393239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 34903579 - 34903511
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||  | |||||||||||||    
T  34903579 ggggttcgaacctcagaccttgcatatattatgcac--tgtccttaccaactgaactaagctcatggggac 34903511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 40967372 - 40967431
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||    
T  40967372 ggtttgaacctcaaaccttgcatatattatg--cattgtccttatcaactgagttaagctca 40967431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 2257033 - 2256972
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||| ||||||||||||||||||||  |||||||| || |||||||||| ||||||    
T  2257033 ggggttcgaaccccagaccttgcatatattatg--cattgtccataccaactgagttaagctca 2256972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 16204824 - 16204877
Alignment:
Q  193 aacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  16204824 aaccccagaccttgcatatattatgca--ttgtccttatcaactgagttaagctca 16204877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 24593454 - 24593377
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||||  ||||||||||| | ||||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  24593454 ttttttggtggtgttcagggttcgaaccccggaccttgcatatattatg--cattgtccttaccaactgagctaagctca 24593377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 43117188 - 43117241
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  43117188 tggggtttgaacctcagaccttgcatatattatg--cattgtccttaccaactgag 43117241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 7640728 - 7640652
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||| ||||||||||||||||| |||| |||||||||||   |||||||||| ||| |||||| |||||| ||||||    
T  7640728 tggtgtctggggttcgaacctcaggccttacatatattatg--tattgtccttaccaattgagttaagctcacggggac 7640652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 12124615 - 12124555
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||| |||||||||| | ||||||||||||||||||  ||||||||||| ||||||||    
T  12124615 tggtgtttgaggttcgaaccccggaccttgcatatattatg--cattgtccttaccaactgag 12124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 12413555 - 12413507
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaac 235  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  12413555 ggggtttgaacctcagaccttgcatatattatg--cattgtccttatcaac 12413507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 12425615 - 12425567
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaac 235  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  12425615 ggggtttgaacctcagaccttgcatatattatg--cattgtccttatcaac 12425567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 19179033 - 19179117
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| | ||||| ||| |||||| | ||||||||||||||||||||  ||||||||||| |||||||| | |||||| ||||||    
T  19179033 ttttttggtagtgttcgggattcgaagcgcagaccttgcatatattatg--cattgtccttaccaactgagctaagctcacggggac 19179117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 28163997 - 28163937
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||| |||| ||||||||||||||| ||||| |||||||  ||||||||||||||||||||    
T  28163997 tggtgtctgggattcgaacctcagaccgtgcatgtattatg--cattgtccttatcaactgag 28163937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 40099387 - 40099450
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||| ||||||||||||||||||||  ||||||||| |||||||| | |||||||||||||    
T  40099387 ttcgaacctc-gaccttgcatatattatgca--ttgtccttaccaactgagctaagctcatggggac 40099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 9982701 - 9982633
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||| ||||| ||||||||||||||| | |||||| |||||||||||||  ||||||||||||||||||||    
T  9982701 tttttttttggtatttggggttcgaacc-cggacctt-catatattatgca--ttgtccttatcaactgagtt 9982633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 35727496 - 35727430
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    ||||||||| || |||||||||||||||||  |||||| |||| |||||||||| |||||| |||||||    
T  35727496 gttcgaaccccaaaccttgcatatattatg--cattgttcttaccaactgagttaagctcacggggacg 35727430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 43356526 - 43356575
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||| || |||||| ||||||||||||| ||||||||||||||||||||    
T  43356526 tttttttttgtgtttagggttcgaacctcggaccttgcatatattatgca 43356575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 5980286 - 5980237
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||| | |||||||||||||||||||  ||||||||||||||||||||    
T  5980286 gttcgaactttagaccttgcatatattatg--cattgtccttatcaactgag 5980237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 9389533 - 9389476
Alignment:
Q  182 tttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||||||||||  |||||||||||||||||||  ||||| |||||||||| ||||||    
T  9389533 tttggggttcgaactccagaccttgcatatattat--acattatccttatcaattgagtt 9389476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 27152431 - 27152354
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| ||||||   ||||||||||| ||||||||||||||||||||  |||| ||| || |||||||||| ||||||    
T  27152431 ttttttggtggtgtcctgggttcgaaccccagaccttgcatatattatg--cattatccctaccaactgagttaagctca 27152354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 39068699 - 39068768
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| |||||||| |||| | || |||||||||||||||  |||||||||||||||||||| | ||||||    
T  39068699 tggtgtatggggttcaaaccccggatcttgcatatattatg--cattgtccttatcaactgagctaagctca 39068768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 39761499 - 39761431
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    ||||||| |||| ||||||||||||||||||||  |||||||||||||||||||| | | |||| |||||||    
T  39761499 ggggttcaaacc-cagaccttgcatatattatg--cattgtccttatcaactgagctaaactcacggggacg 39761431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 12124754 - 12124694
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||| |||||||||  | ||||||||||||||||||  ||||||||||| ||||||||    
T  12124754 tggtgtttgaggttcgaactccggaccttgcatatattatg--cattgtccttaccaactgag 12124694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 25274820 - 25274880
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| |||||||||||| |||||||| |||||||||||  |||||| |||| ||||||||    
T  25274820 tggtgttcggggttcgaaccccagaccttacatatattatg--cattgttcttaccaactgag 25274880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 28771660 - 28771592
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||||  |||||||||||| | || |||||||||||||||  ||||||||||| ||||||||    
T  28771660 ttttttggtggtgtccggggttcgaaccgcggatcttgcatatattatg--cattgtccttaccaactgag 28771592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 3503044 - 3503002
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||  ||||||||| ||||||||||||||||||||||||    
T  3503044 tggtgttcagggttcgaatctcagaccttgcatatattatgca 3503002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 9547408 - 9547467
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagct 246  Q
    |||||| ||||| || |||||||||||||||||  |||||||| ||||||||||||| ||||    
T  9547408 ggggtttgaaccccaaaccttgcatatattatg--cattgtccatatcaactgagttaagct 9547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 10724001 - 10723967
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||||||||||||||||||||||||||    
T  10724001 ggggtttgaacctcagaccttgcatatattatgca 10723967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 19156149 - 19156195
Alignment:
Q  171 ttttgttggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    ||||| |||||| ||||||| |||||||| |||||||||||||||||    
T  19156149 ttttggtggtgtctggggtttgaacctcaaaccttgcatatattatg 19156195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 37320518 - 37320577
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||  |||||||||||||||||  ||||||| ||| |||||||||| ||||||    
T  37320518 ggttcgaacctcgaaccttgcatatattatg--cattgtctttaccaactgagttaagctca 37320577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 42475109 - 42475143
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||||||||||||||||| |||||||    
T  42475109 ggggttcgaacctcagaccttgcatattttatgca 42475143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 10332281 - 10332335
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||| |||||||||||||  |||||||||||||||||| | ||||||    
T  10332281 gaacctccgaccttccatatattatgca--ttgtccttatcaactgagctaagctca 10332335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 19549496 - 19549430
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||| ||||||||||||||||||||||  |||||| | || || ||||||| |||||||| ||||    
T  19549496 ggttcgaatctcagaccttgcatatattatg--cattgttcataccagctgagttaagctcatgaggac 19549430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 25048837 - 25048866
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||||||||||||||||||||||||||    
T  25048837 ggggttcgaacctcagaccttgcatatatt 25048866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 35757434 - 35757401
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcac 220  Q
    |||||||||||||||| |||||||||||||||||    
T  35757434 ggttcgaacctcagactttgcatatattatgcac 35757401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 2661031 - 2661067
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatat 213  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  2661031 tggtggttggggttcgaacctcggaccttgcatatat 2661067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 4897589 - 4897544
Alignment:
Q  201 accttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  4897589 accttgcatatattatgca--ttgtccttaccaactgagttaagctca 4897544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 4944983 - 4944938
Alignment:
Q  201 accttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  4944983 accttgcatatattatgca--ttgtccttaccaactgagttaagctca 4944938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 7302140 - 7302192
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||||||| |||||||||||||| |||||  |||||||| |||||||||||    
T  7302140 tggggttcgaacc-cagaccttgcatattttatg--cattgtccctatcaactgag 7302192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 8920558 - 8920518
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    ||||||||||  ||||||||||| |||||||||||||||||    
T  8920558 tggtgtttggaattcgaacctcaaaccttgcatatattatg 8920518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 11810381 - 11810430
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaact 236  Q
    |||||||||||| ||||| ||||| ||||||||  |||||||||||||||||    
T  11810381 ggggttcgaaccccagactttgcacatattatg--cattgtccttatcaact 11810430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 12599864 - 12599896
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatg 217  Q
    |||||||||||| ||||||||||||||||||||    
T  12599864 ggggttcgaaccccagaccttgcatatattatg 12599896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 18324885 - 18324954
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||  ||||||||| |  ||| |||||||||||||||||  ||||||||| |||||||||| ||||||    
T  18324885 tggtgttcagggttcgaatcctagatcttgcatatattatgca--ttgtccttaccaactgagttaagctca 18324954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 20239401 - 20239344
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||| |||||||||||||||||||  |||| ||| |||||| |||||| ||||||    
T  20239401 ttcgaaccttagaccttgcatatattatg--cattatccctatcaattgagttaagctca 20239344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 20565066 - 20565135
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||| |||||||| ||||| | ||||||||||||||||||  |||||||| || |||||||| | ||||||    
T  20565066 tggtggttggggtttgaaccccggaccttgcatatattatg--cattgtccctaccaactgagctaagctca 20565135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 25186240 - 25186293
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||| | ||||||||||||||||||  |||||||| |||||||||||    
T  25186240 tggggtttgaaccccggaccttgcatatattatg--cattgtccatatcaactgag 25186293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 26133535 - 26133580
Alignment:
Q  201 accttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  26133535 accttgcatatattatgca--ttgtccttaccaactgagttaagctca 26133580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 28202375 - 28202298
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| || ||| |||||||| |||| || |||||| |||||||||||  |||||||| ||||||||||| | ||||||    
T  28202375 ttttttttttgtgattggggtttgaacttcggaccttacatatattatg--cattgtccctatcaactgagctaagctca 28202298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 31815886 - 31815947
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||| | ||||||||||||||||||  |||||||| || |||||||||| ||||||    
T  31815886 ggggtttgaaccccggaccttgcatatattatg--cattgtccctaccaactgagttaagctca 31815947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 32844941 - 32844865
Alignment:
Q  168 cttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctc 247  Q
    ||||||||| ||||| |||||||||||||   |||||| |||||||||||  |||| || |||||||||||||| |||||    
T  32844941 cttttttgt-ggtgtctggggttcgaaccgtggaccttacatatattatg--cattatcattatcaactgagttaagctc 32844865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 35685063 - 35685112
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||||  |||||||||||||||||||  ||||||||||| ||||||||    
T  35685063 gttcgaaccctagaccttgcatatattatg--cattgtccttaccaactgag 35685112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 25467 - 25384
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatgggga 254  Q
    ||||||| |||||| |||||||||||||   ||||||||||||||||||  ||||||||||| |||||||||| |||||| |||||    
T  25467 ttttttggtggtgtctggggttcgaaccctggaccttgcatatattatg--cattgtccttaccaactgagttaagctcacgggga 25384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 30623371 - 30623294
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| | ||||| |||||||||||| ||||||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  30623371 ttttttggtcgtgttcggggttcgaaccccagaccttgcatatattatg--cattgtccttaccaactgagctaagctca 30623294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 9655989 - 9656059
Alignment:
Q  178 ggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatg 250  Q
    |||| |||||||||||||||| |||||||||||| |||||  ||||||||||| |||||||| | ||||||||    
T  9655989 ggtggttggggttcgaacctcggaccttgcatattttatg--cattgtccttaccaactgagctaagctcatg 9656059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 8442493 - 8442546
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctc 247  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  8442493 gaacctcagaccttgcatatattatg--cattgtccttaccaactgagttaagctc 8442546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 9019555 - 9019631
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||||||||||| ||||  |||||||||||||||||||  ||||||| ||| |||||| ||| ||||||| |||||    
T  9019555 tggtgtttggggttcaaacccaagaccttgcatatattatg--cattgtctttaccaactgcgttaagctcatcgggac 9019631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 19778143 - 19778059
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| |||||| | || |||||||| | ||||||||||||||||||  ||||||||||| |||||||| | |||||| ||||||    
T  19778143 ttttttggtggtgtctaggattcgaaccccggaccttgcatatattatg--cattgtccttaccaactgagctaagctcacggggac 19778059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 41430763 - 41430822
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    |||||||||||||||||||||||||  ||| |||||||||  ||||||| ||||||||||||    
T  41430763 tggtgtttggggttcgaacctcagatattgtatatattat--acattgttcttatcaactga 41430822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 8984491 - 8984561
Alignment:
Q  183 ttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||| ||||||| ||| ||||||||||||||||  ||||| ||| || |||||||||| |||||||||||||    
T  8984491 ttgggattcgaacatcaaaccttgcatatattat--acattatccataccaactgagttaagctcatggggac 8984561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 1244704 - 1244756
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||||||| ||||||||| ||||||||||  ||||||||||| ||||||||    
T  1244704 ggggttcgaaccccagaccttgtatatattatg--cattgtccttaccaactgag 1244756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 217
Target Start/End: Original strand, 13032363 - 13032393
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatg 217  Q
    |||||||||||||||||||||||||||||||    
T  13032363 ggttcgaacctcagaccttgcatatattatg 13032393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 24033329 - 24033257
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgca--cattgtccttatcaactgagtttagctca 248  Q
    ||||| |||||||||||||| |||||||||||||||||||  |  ||||||||||| ||||| |||| ||||||    
T  24033329 tggtgattggggttcgaacc-cagaccttgcatatattatatatgcattgtccttaccaactaagttaagctca 24033257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 27750905 - 27750964
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||| | |||||||||||||||||||||  |||||||| |||||||| | ||||||    
T  27750905 ggttcgaaccccggaccttgcatatattatgcac--tgtccttaccaactgagctaagctca 27750964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 29499849 - 29499799
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| ||||||||||||||||||||   |||||||||||| |||||||    
T  29499849 ttttttggtggtgtttggggttcgaaccctggaccttgcatattttatgca 29499799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 41625272 - 41625222
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| |||||| ||||||||||||||  ||||||| |||||||||||||    
T  41625272 tttttttttggtggttggggttcgaaccctagaccttacatatattatgca 41625222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 42200663 - 42200722
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||| |||||||||||| ||||||||||||  ||||||||| ||||||||||| | ||||||    
T  42200663 ggtttgaacctcagaccatgcatatattat--acattgtccctatcaactgagctaagctca 42200722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 29186557 - 29186503
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| ||||||||||||||| |||  ||||||||| |||||||||| ||||||    
T  29186557 gaacctcataccttgcatatattacgca--ttgtccttaccaactgagttgagctca 29186503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 32944839 - 32944893
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||| |||||||||||||||||||| |||||  |||||||| || ||||||||||    
T  32944839 ggggtttgaacctcagaccttgcatattttatg--cattgtccataccaactgagtt 32944893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 38763515 - 38763548
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||| ||||||||||||||||||||||    
T  38763515 gggttcgaaccccagaccttgcatatattatgca 38763548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 42208470 - 42208520
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||| ||||||| ||||||||||||||||||  ||||||||||| ||||||||    
T  42208470 ggtttgaacctcggaccttgcatatattatg--cattgtccttaccaactgag 42208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 6314322 - 6314383
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||  || |||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  6314322 ggggttcgaatttcggaccttgcatattttatgca--ttgtccttatcaactgagctaagctca 6314383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 9071017 - 9070968
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||||| |||||| ||||||||||  |||||||||||| ||||||||    
T  9071017 gttcgaacctcggaccttacatatattat--acattgtccttaccaactgag 9070968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 10290803 - 10290847
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    |||||| ||||||||||  ||||||||||||||| ||||||||||    
T  10290803 tttttgatggtgtttggaattcgaacctcagaccctgcatatatt 10290847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 32944987 - 32944942
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatc 232  Q
    |||||| |||| |||||||||||||||||||||  |||||||||||||    
T  32944987 ggggtttgaacttcagaccttgcatatattatg--cattgtccttatc 32944942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 28039859 - 28039920
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  28039859 ggggttcaaacctcagaccttgcatatattatg--cattgtccttaccaactgagttaagctca 28039920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 22335433 - 22335386
Alignment:
Q  172 tttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  22335433 tttgttggtgttcggggtttgaacctcagaccttgcatatattatgca 22335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 47528430 - 47528514
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| ||||||  |||||||||||||| |||||||| |||||||||  ||||||||||| |||||||| | |||||| ||||||    
T  47528430 ttttttggtggtgtccggggttcgaacctcggaccttgcgtatattatg--cattgtccttaccaactgagctaagctcacggggac 47528514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 16580783 - 16580866
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||| |||||| ||||| |||||||| |||||||||||||||||||  ||||||||| || ||||||| || |||||| ||||||    
T  16580783 ttttttttggtggttgggattcgaaccccagaccttgcatatattat--acattgtccataccaactgaattaagctcacggggac 16580866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 18056715 - 18056784
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    ||||||||||||||| || ||||||||||||||  ||||||||||| |||||||||| |||| | |||||||    
T  18056715 ggggttcgaacctcacacattgcatatattatg--cattgtccttaccaactgagttaagcttacggggacg 18056784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 23405341 - 23405425
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| ||||| | ||| ||||||||   ||||||||||||||||||||  ||||||||| ||||| |||| |||||||||||||    
T  23405341 ttttttggtggtggtcgggattcgaaccctggaccttgcatatattatgca--ttgtccttaacaactaagttaagctcatggggac 23405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 41950067 - 41950114
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattat 216  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  41950067 ttttttggtggtggtcggggttcgaacctcagaccttgcatatattat 41950114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 29251815 - 29251782
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||||||||||||||||||||||||||||||    
T  29251815 gggttcgaacctcagaccttgcatatattatgca 29251782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 29987103 - 29987165
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||| |||||||||||||  ||||||||||||||||||||  ||||||||||  ||||||||||    
T  29987103 tggtggttggggttcgaactccagaccttgcatatattatg--cattgtccttgccaactgagtt 29987165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 30937534 - 30937488
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaact 236  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  30937534 gttcgaaccccagaccttgcatatattat--acattgtccttatcaact 30937488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 38448852 - 38448934
Alignment:
Q  172 tttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    |||| ||||||  ||| |||||||| | ||||||||||||||||||  ||||||||||| |||||||| | |||||| |||||||    
T  38448852 tttggtggtgtccgggattcgaaccccggaccttgcatatattatg--cattgtccttaccaactgagctaagctcacggggacg 38448934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 10132445 - 10132494
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    |||||||||| ||||||||||||||||||||  ||||||||||| |||||||    
T  10132445 ggttcgaaccccagaccttgcatatattatg--cattgtccttaccaactga 10132494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 15382822 - 15382879
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||| |||||||||||||||||  ||||||| | ||||||||||||| ||||||    
T  15382822 ttcgaacctcggaccttgcatatattat--acattgttcatatcaactgagttaagctca 15382879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 19262890 - 19262967
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||| ||||||||||||| |  || |||||||| |||||  |||||||||||||||||||| | ||||||    
T  19262890 ttttttggtggtgtctggggttcgaaccccgaactttgcatatgttatg--cattgtccttatcaactgagctaagctca 19262967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 33153871 - 33153940
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||| ||||||| |||||| |||||||||||  |||||||| || |||||||||| ||||||    
T  33153871 tggtgttcggggtttgaacctcggaccttacatatattatg--cattgtccctaccaactgagttaagctca 33153940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 2665293 - 2665336
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcata-tattatgca 219  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  2665293 tggtggttggggttcgaacctcagaccttgcatattattatgca 2665336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 3937520 - 3937575
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||| | ||||||||||||||||||  ||||||||||| ||||||||    
T  3937520 tggggtttgaaccccggaccttgcatatattatgtgcattgtccttaacaactgag 3937575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 5033603 - 5033551
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgt-ccttatcaactgagt 240  Q
    |||||||||| |||||||||||||||||||||||  ||| |||||||||||||||    
T  5033603 ggttcgaaccccagaccttgcatatattatgcac--tgtcccttatcaactgagt 5033551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 5280693 - 5280658
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcac 220  Q
    |||||||||||| |||||||||||||||||||||||    
T  5280693 ggggttcgaaccccagaccttgcatatattatgcac 5280658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 6000142 - 6000210
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||| | |||||||||| | |||| ||||||    
T  6000142 ggggtttgaacctcggaccttgcatatattatg--cattgtcctaaccaactgagttaaactcacggggac 6000210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 9398397 - 9398473
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| || ||| ||||||||||||| |||||||| ||||||| |||  |||||| |||| |||||||||||| ||||    
T  9398397 tttttggtgttgtctggggttcgaaccccagaccttacatatatcatg--cattgttcttaccaactgagtttatctca 9398473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 9872088 - 9872156
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| || ||| ||||||||||||| || |||||||||||||||||  |||| |||||| ||||||||    
T  9872088 ttttttggtgctgtctggggttcgaaccgcaaaccttgcatatattatg--cattatccttaccaactgag 9872156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 13615603 - 13615663
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| |||||||||||||  |||||||||| |||||||  ||||||||||| ||||||||    
T  13615603 tggtgttcggggttcgaaccttggaccttgcatgtattatg--cattgtccttaccaactgag 13615663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 17221519 - 17221587
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||||||| ||||||||||||||||||  |||||| |||| ||||| |||| | |||| ||||||    
T  17221519 ggggttcgaacctcggaccttgcatatattatg--cattgttcttaccaacttagttaaactcacggggac 17221587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 30795779 - 30795711
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||||||||  |||||||||||  ||||||||||||||||||  |||||| |||| ||||||||    
T  30795779 ttttttggtggtgtttaaggttcgaaccttggaccttgcatatattatg--cattgttcttaccaactgag 30795711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 33020041 - 33020076
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33020041 tggggtttgaacctcagaccttgcatatattatgca 33020076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 34366282 - 34366370
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacgatt 259  Q
    |||||| |||||||   |||||| ||||||||||||||||||| ||||||||  |||| |||||||||||  | ||||||  |||||||||    
T  34366282 tttttttttggtgtccagggttcaaacctcagaccttgcatatgttatgcac--tgtctttatcaactgaactaagctcaaagggacgatt 34366370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 912386 - 912311
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagct 246  Q
    ||||||| |||||| |||||||| |||||||||||||  |||||||||  |||||| | |||||||||| ||| ||||    
T  912386 ttttttgatggtgtctggggttcaaacctcagaccttatatatattat--acattgactttatcaactgtgttaagct 912311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 29233965 - 29234007
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||| |||||||||||||| |||||||||||||| |||||||    
T  29233965 tggtggttggggttcgaaccccagaccttgcatattttatgca 29234007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 32944814 - 32944764
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| ||||| | |||||||||||| ||||| ||||||||||||||||    
T  32944814 ttttttggtggtggtcggggttcgaaccccagacgttgcatatattatgca 32944764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 34766920 - 34766861
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||| |||||||||||| ||||||  ||||||||| || |||||||||| ||||||    
T  34766920 ggttcgaaccccagaccttgcatgtattat--acattgtccataccaactgagttaagctca 34766861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 35442915 - 35442856
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||| ||||||| ||||||||||  |||||| | || |||||||||||||||||    
T  35442915 ggttcgaacctcggaccttgaatatattatg--cattgttcataccaactgagtttagctca 35442856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 35778200 - 35778234
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||||||||||||||||||| ||||    
T  35778200 ggggttcgaacctcagaccttgcatatattgtgca 35778234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 1408478 - 1408428
Alignment:
Q  204 ttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    ||||||||||||||||  ||||||||| |||||||||| |||| |||||||||    
T  1408478 ttgcatatattatgca--ttgtccttaccaactgagttaagcttatggggacg 1408428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 3157701 - 3157750
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| ||||| |||||||| |||||||| |||||| ||||||||||||    
T  3157701 tttttggtggtggttggggtttgaacctcaaaccttgtatatattatgca 3157750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 9639818 - 9639884
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||  | ||||||||||||||||||  ||||||||||| ||| |||||| |||||| ||||||    
T  9639818 ggttcgaactccggaccttgcatatattatg--cattgtccttaccaagtgagttaagctcacggggac 9639884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 16033456 - 16033502
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagt 240  Q
    ||||| ||||||||||||||||||||  |||||||| ||||||||||||    
T  16033456 gaaccccagaccttgcatatattatg--cattgtccctatcaactgagt 16033502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 28832177 - 28832231
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||||||||  |||||| | || |||||||||| ||||||    
T  28832177 gaacctcagaccttgcatatattatg--cattgttcataccaactgagttaagctca 28832231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 30561784 - 30561751
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||| |||||||||||||||||||||    
T  30561784 gggttcgaaccttagaccttgcatatattatgca 30561751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 45481552 - 45481486
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggacg 256  Q
    ||||||||| | ||||||||||||||||||  ||||||||||| ||| ||| || |||||| |||||||    
T  45481552 gttcgaaccccggaccttgcatatattatg--cattgtccttaccaaatgaattaagctcacggggacg 45481486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 46335059 - 46335092
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||| ||||||||||||||||||||||||||||    
T  46335059 gggtttgaacctcagaccttgcatatattatgca 46335092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 49875613 - 49875659
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  49875613 gaccttgcatatattatgca--ttgtccttaccaactgagttaagctca 49875659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 13054933 - 13054901
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||| ||||||||||||||||||||    
T  13054933 ggttcgaacctccgaccttgcatatattatgca 13054901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 17034857 - 17034780
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||| |||||||| ||||||||| || || |||  ||||||||  ||||| || |||||||||||||| ||||||    
T  17034857 ttttttgttagtgtttggagttcgaaccccaaacgttgtttatattat--acattatctttatcaactgagttaagctca 17034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 29798106 - 29798167
Alignment:
Q  176 ttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||| ||| ||||||||| |||||||| |||||||||||  |||||| |||||| ||||||    
T  29798106 ttggtgtctggtgttcgaaccccagaccttacatatattatg--cattgttcttatcgactgag 29798167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 34808566 - 34808623
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||  |||||||||||||||||  ||||||||||| |||||||| | ||||||    
T  34808566 ttcgaacctcgaaccttgcatatattatg--cattgtccttaacaactgagctaagctca 34808623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 41362679 - 41362647
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||| ||||||||||||||||||||    
T  41362679 ggttcgaacctccgaccttgcatatattatgca 41362647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 42416862 - 42416813
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||||||| || |||||||||||||||||  |||| |||||||||||||||    
T  42416862 gttcgaaccccaaaccttgcatatattatg--cattatccttatcaactgag 42416813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 404240 - 404164
Alignment:
Q  170 tttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| |||||| ||||||||||||||| ||| ||||||||||||||  ||||||||||| ||||| |||| ||||||    
T  404240 tttttggtggtgtctggggttcgaacctcggacattgcatatattatg--cattgtccttaccaactaagttaagctca 404164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 12808947 - 12808897
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  12808947 ttttttttttgtgtttggggttcgaaccccagaccttgcatatattatgca 12808897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 35110132 - 35110082
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  35110132 ttttttggtggtgtttggggttcgaacctcaaaccttacatatattatgca 35110082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 10278528 - 10278461
Alignment:
Q  172 tttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||| ||||| ||||||||||||| ||||| |||||||||||||||  |||||||| |||||| ||||||    
T  10278528 tttggtggtggttggggttcgaacttcagatcttgcatatattatg--cattgtccatatcaattgagtt 10278461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 28046170 - 28046228
Alignment:
Q  178 ggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactga 238  Q
    |||||| ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||    
T  28046170 ggtgttcggggttcaaacctcaaaccttgcatatattatg--cattgtctttatcaactga 28046228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 31971590 - 31971532
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagct 246  Q
    ||||| ||||||| ||||||||||||||||||  ||||||||||| |||||||||| ||||    
T  31971590 gggtttgaacctcggaccttgcatatattatg--cattgtccttaccaactgagttaagct 31971532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 17829300 - 17829368
Alignment:
Q  178 ggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| |||||||||||||| ||| ||||||||||||||  ||| ||||||| |||||||| | ||||||    
T  17829300 ggtgttcggggttcgaacctcggactttgcatatattatg--catagtccttaccaactgagctaagctca 17829368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 6610153 - 6610085
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||||||||||||   |||||||||||  ||| |||||||||||||||  ||||| ||||||||||||||||    
T  6610153 ttttttgttggtgtc--gggttcgaaccctagatcttgcatatattatg--cattgcccttatcaactgagtt 6610085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 21865425 - 21865467
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    |||||| |||||||| ||||| |||||||||||||||||||||    
T  21865425 tggtgtctggggttctaaccttagaccttgcatatattatgca 21865467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Original strand, 30639429 - 30639459
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgca 219  Q
    |||||||||||||||||||||||||||||||    
T  30639429 ttcgaacctcagaccttgcatatattatgca 30639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 2726416 - 2726470
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    |||||||||||| | ||||||||||||||||||  |||||||| || ||||||||||    
T  2726416 ggggttcgaaccccggaccttgcatatattatg--cattgtccataccaactgagtt 2726470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 3024632 - 3024575
Alignment:
Q  179 gtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaact 236  Q
    |||||| |||||||||| ||||| ||||||||||||||  ||||| |||||| |||||    
T  3024632 gtgtttagggttcgaacatcagatcttgcatatattatatacattatccttaccaact 3024575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 6864150 - 6864196
Alignment:
Q  203 cttgcatatattatgcacattgtccttatcaactgagtttagctcatgg 251  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||||||    
T  6864150 cttgcatatattatgca--ttgtccttttcaactgagttaagctcatgg 6864196  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 14049890 - 14049944
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||||||||  |||||||   |||||||||| ||||||||    
T  14049890 gaacctcagaccttgcatatattatg--cattgtctcaatcaactgagcttagctca 14049944  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 15291692 - 15291750
Alignment:
Q  188 gttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||||||| ||||||||||||||||   ||||||||||| ||||| |||| ||||||    
T  15291692 gttcgaacctcaaaccttgcatatattat--tcattgtccttaccaactaagttaagctca 15291750  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 18256930 - 18256884
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||||||    
T  18256930 gaccttgcatatattatgca--ttgtccttatcaactgagctaagctca 18256884  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 33824941 - 33824891
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||| ||||| | ||||||||||||||||||  ||||||||||||||||||||    
T  33824941 ggtttgaaccccggaccttgcatatattatg--cattgtccttatcaactgag 33824891  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 334195 - 334150
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||||||    
T  334195 gaaccccagaccttgcatatattatg--cattgtctttatcaactgag 334150  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 3808116 - 3808185
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    ||||||| ||| ||| ||||||||||||||||||  |||||||||||  ||||||||| || ||| ||||||    
T  3808116 tggggtttgaatctcggaccttgcatatattatg--cattgtccttactaactgagttaagttcacggggac 3808185  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 4450320 - 4450263
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| | ||||||||||||||||||  ||||||| |||||||||||| | ||||||    
T  4450320 ttcgaaccccggaccttgcatatattatg--cattgtctttatcaactgagctaagctca 4450263  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 7273112 - 7273043
Alignment:
Q  186 gggttcgaacctcagaccttgcatatattatgcacattgt-ccttatcaactgagtttagctcatggggacg 256  Q
    ||||||||||| |||||||||||||||||||   |||| | ||||| |||||||||| |||||| |||||||    
T  7273112 gggttcgaaccacagaccttgcatatattat--tcattatcccttaccaactgagttaagctcacggggacg 7273043  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 8381192 - 8381261
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctcatggggac 255  Q
    |||||||||||||   |||||||||||| |||||  ||||||| ||| |||||||||| |||||| ||||||    
T  8381192 tggggttcgaaccctggaccttgcatatgttatg--cattgtctttaccaactgagttaagctcacggggac 8381261  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 12232164 - 12232233
Alignment:
Q  169 ttttttgt-tggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||||||| ||||| | |||||||||||| |||||  |||||||||||||  |||||||| |||||||||||    
T  12232164 ttttttgtgtggtggtcggggttcgaaccccagacactgcatatattatg--cattgtccctatcaactgag 12232233  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 15187125 - 15187064
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||||| ||||||||||||||||||  |||||| ||||||| ||||| | ||||||    
T  15187125 ggggtttgaacctcggaccttgcatatattatg--cattgtacttatcagctgagctaagctca 15187064  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 15473481 - 15473542
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||||| ||||||||||||||||||  |||||| ||||||| ||||| | ||||||    
T  15473481 ggggtttgaacctcggaccttgcatatattatg--cattgtacttatcagctgagctaagctca 15473542  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 20744200 - 20744139
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||| ||||||||||||||||||||  |||||||| || |||||||| | ||||||    
T  20744200 ggggtttgaaccccagaccttgcatatattatg--cattgtccataccaactgagctaagctca 20744139  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 28757039 - 28757084
Alignment:
Q  201 accttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||  |||||||||||| |||||||||| ||||||    
T  28757039 accttgcatatattat--acattgtccttaccaactgagttaagctca 28757084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 28758275 - 28758323
Alignment:
Q  171 ttttgttggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||| ||||||| |||||| ||||||| ||| ||||||||||||||||    
T  28758275 ttttggtggtgttcggggtttgaacctcggactttgcatatattatgca 28758323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 29069545 - 29069484
Alignment:
Q  185 ggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| ||||||||||| || |||||||||||  |||||||| ||||||||||| | ||||||    
T  29069545 ggggtttgaacctcagacttttcatatattatg--cattgtccctatcaactgagctaagctca 29069484  T

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Target: scaffold0334 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 5252 - 5210
Alignment:
Q  177 tggtgtttggggttcgaacctcagaccttgcatatattatgca 219  Q
    ||||| |||||||| ||||||||||||||||||||||||||||    
T  5252 tggtggttggggtttgaacctcagaccttgcatatattatgca 5210  T

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Target: scaffold0262 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 15928 - 15990
Alignment:
Q  184 tggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| ||||| |||||||||||||||||||  |||||||||||| ||| |||||| ||||||    
T  15928 tggggtttgaaccccagaccttgcatatattat--acattgtccttaccaattgagttaagctca 15990  T

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Target: scaffold0426 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 5823 - 5900
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||| |||||| ||||||||||||| |||||||| ||||||||||  ||||| | ||| ||||||||| | ||||||    
T  5823 ttttttggtggtgtctggggttcgaaccccagaccttacatatattat--acattattcttttcaactgagctaagctca 5900  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 75383 - 75326
Alignment:
Q  189 ttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||||| | ||||||||||||||||||  ||||||||||| |||||||| ||||||||    
T  75383 ttcgaaccccggaccttgcatatattatg--cattgtccttaccaactgagcttagctca 75326  T

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Target: scaffold1694 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 215 - 165
Alignment:
Q  187 ggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgag 239  Q
    |||| ||||||||||||||||||| ||||||  |||||||| |||||||||||    
T  215 ggtttgaacctcagaccttgcatacattatg--cattgtccatatcaactgag 165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 4579 - 4624
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatatt 214  Q
    ||||||| ||||||||||||||||||||   |||||||||||||||    
T  4579 ttttttggtggtgtttggggttcgaacccgggaccttgcatatatt 4624  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 34902 - 34948
Alignment:
Q  200 gaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    ||||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  34902 gaccttgcatatattatgca--ttgtccttaccaactgagttaagctca 34948  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 99092 - 99046
Alignment:
Q  192 gaacctcagaccttgcatatattatgcacattgtccttatcaactgagt 240  Q
    ||||| ||||||||||||||||||||  |||||||| ||||||||||||    
T  99092 gaaccccagaccttgcatatattatg--cattgtccctatcaactgagt 99046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 634 - 557
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtttagctca 248  Q
    |||||| |||||| | ||||||| | | ||||||||| |||||||||| |||  ||||||||||||||||| | ||||||    
T  634 tttttttttggtggtcggggttcaagcgtcagaccttacatatattatacac--tgtccttatcaactgagctaagctca 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 3218 - 3171
Alignment:
Q  169 ttttttgttggtgtttggggttcgaacctcagaccttgcatatattatg 217  Q
    ||||||||||||| || ||||| |||| |||||||||||||||||||||    
T  3218 ttttttgttggtggttcgggtttgaac-tcagaccttgcatatattatg 3171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 48090 - 48029
Alignment:
Q  178 ggtgtttggggttcgaacctcagaccttgcatatattatgcacattgtccttatcaactgagtt 241  Q
    ||||| |||||||| |||  ||||||||||||||||||||  |||| | |||||||||||||||    
T  48090 ggtgtatggggttctaactccagaccttgcatatattatg--cattatgcttatcaactgagtt 48029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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