View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16345_high_10 (Length: 246)
Name: NF16345_high_10
Description: NF16345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16345_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 25235871 - 25236076
Alignment:
| Q |
23 |
aaaccaaaagaatctctctttctcttgtcaaaactttgttgtgtatcccaacaaagaataaaaccctgaccataccctctgtctcattccaaacataaaa |
122 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25235871 |
aaaccaaaagaatctctctttctcttgtcaaaactttgttgtgtatcccaacaaagaataaaaccctgaccataccctctgtctcattccaaacataaaa |
25235970 |
T |
|
| Q |
123 |
gaaaacaccacactaccctctgcccttaaaatttattcacatctgacacattcttaactcctatgtccctcactctcacaaattccacattgcattattc |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25235971 |
gaaaacaccacactaccctctgcccttaaaatttattcacatctgacacattcttaactcctatgtccctcactctcacaaattccacattgcattattc |
25236070 |
T |
|
| Q |
223 |
ttcact |
228 |
Q |
| |
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|||||| |
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| T |
25236071 |
ttcact |
25236076 |
T |
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