View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16345_high_6 (Length: 326)

Name: NF16345_high_6
Description: NF16345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16345_high_6
NF16345_high_6
[»] chr4 (38 HSPs)
chr4 (1-307)||(20770720-20771025)
chr4 (191-300)||(37109320-37109429)
chr4 (204-307)||(2184994-2185097)
chr4 (196-308)||(7292759-7292871)
chr4 (208-308)||(38869783-38869883)
chr4 (215-307)||(44194946-44195038)
chr4 (237-308)||(4249221-4249292)
chr4 (240-295)||(10048027-10048082)
chr4 (1-68)||(20770594-20770661)
chr4 (238-308)||(27372618-27372688)
chr4 (240-308)||(7539637-7539704)
chr4 (237-308)||(23378000-23378071)
chr4 (193-307)||(51250484-51250598)
chr4 (191-308)||(31759619-31759736)
chr4 (192-285)||(46545710-46545803)
chr4 (193-285)||(7949438-7949530)
chr4 (248-308)||(15180793-15180853)
chr4 (192-308)||(28635695-28635811)
chr4 (215-307)||(33632098-33632190)
chr4 (189-308)||(37274420-37274540)
chr4 (243-308)||(6666387-6666452)
chr4 (215-308)||(16581715-16581808)
chr4 (193-274)||(21660139-21660220)
chr4 (193-274)||(21668903-21668984)
chr4 (217-278)||(31802037-31802098)
chr4 (237-286)||(51622529-51622578)
chr4 (240-300)||(21404790-21404850)
chr4 (237-285)||(29195139-29195186)
chr4 (237-308)||(8030165-8030236)
chr4 (237-307)||(19680750-19680820)
chr4 (237-271)||(32992656-32992690)
chr4 (237-307)||(51969061-51969131)
chr4 (192-269)||(31826608-31826685)
chr4 (237-286)||(46295141-46295190)
chr4 (237-286)||(49576877-49576926)
chr4 (192-308)||(1730450-1730566)
chr4 (237-285)||(2622379-2622427)
chr4 (240-308)||(24991574-24991642)
[»] chr7 (55 HSPs)
chr7 (192-308)||(26459371-26459487)
chr7 (192-295)||(33869419-33869522)
chr7 (192-308)||(17113794-17113910)
chr7 (193-285)||(23552118-23552210)
chr7 (204-307)||(37162312-37162415)
chr7 (193-307)||(43215184-43215298)
chr7 (192-308)||(39631843-39631959)
chr7 (229-307)||(29785263-29785341)
chr7 (192-308)||(18363695-18363810)
chr7 (191-287)||(22760861-22760957)
chr7 (193-308)||(17040973-17041088)
chr7 (193-308)||(25655189-25655304)
chr7 (193-300)||(48716280-48716383)
chr7 (242-287)||(29538544-29538589)
chr7 (131-191)||(3377890-3377950)
chr7 (189-308)||(2962456-2962574)
chr7 (193-308)||(20335792-20335907)
chr7 (241-304)||(21569997-21570060)
chr7 (217-272)||(30217903-30217958)
chr7 (193-308)||(35119383-35119498)
chr7 (238-308)||(21558173-21558243)
chr7 (217-306)||(27255357-27255446)
chr7 (216-300)||(13106751-13106834)
chr7 (193-285)||(30579335-30579427)
chr7 (192-307)||(24513796-24513911)
chr7 (196-307)||(45976885-45976996)
chr7 (191-285)||(4566412-4566506)
chr7 (192-286)||(15137552-15137646)
chr7 (217-306)||(27266783-27266872)
chr7 (198-275)||(41519258-41519335)
chr7 (240-300)||(11700212-11700271)
chr7 (199-307)||(21877814-21877922)
chr7 (237-308)||(7721413-7721484)
chr7 (240-307)||(7744074-7744141)
chr7 (240-307)||(22308103-22308170)
chr7 (193-308)||(23301563-23301678)
chr7 (229-300)||(37094785-37094856)
chr7 (243-286)||(48582820-48582863)
chr7 (237-307)||(24438209-24438279)
chr7 (210-300)||(33222387-33222477)
chr7 (194-307)||(2495798-2495911)
chr7 (240-285)||(27313718-27313763)
chr7 (237-286)||(29385726-29385775)
chr7 (191-272)||(30442486-30442567)
chr7 (237-285)||(2882994-2883042)
chr7 (5-49)||(3377675-3377719)
chr7 (231-307)||(5672531-5672607)
chr7 (231-307)||(5697583-5697659)
chr7 (237-273)||(7309400-7309436)
chr7 (192-304)||(7801179-7801291)
chr7 (193-273)||(14058253-14058333)
chr7 (193-273)||(14368281-14368361)
chr7 (196-308)||(15905635-15905746)
chr7 (237-285)||(31835236-31835284)
chr7 (215-307)||(47824563-47824654)
[»] chr1 (42 HSPs)
chr1 (195-307)||(33700735-33700847)
chr1 (193-307)||(36371470-36371584)
chr1 (193-305)||(8904414-8904526)
chr1 (205-308)||(2799874-2799977)
chr1 (193-308)||(8177143-8177258)
chr1 (193-308)||(4566548-4566662)
chr1 (197-307)||(1247117-1247227)
chr1 (192-300)||(9165164-9165272)
chr1 (193-286)||(51814494-51814587)
chr1 (196-304)||(15786286-15786393)
chr1 (215-307)||(50919976-50920068)
chr1 (237-308)||(11063600-11063671)
chr1 (204-307)||(35699963-35700068)
chr1 (191-308)||(17745218-17745334)
chr1 (248-308)||(29738253-29738313)
chr1 (240-300)||(32524378-32524438)
chr1 (191-275)||(51703777-51703861)
chr1 (249-308)||(40810523-40810582)
chr1 (237-287)||(3265968-3266018)
chr1 (261-307)||(29056446-29056492)
chr1 (237-286)||(31605831-31605880)
chr1 (193-286)||(37400274-37400367)
chr1 (193-270)||(40257399-40257476)
chr1 (192-268)||(7743326-7743402)
chr1 (193-285)||(21547464-21547556)
chr1 (248-308)||(29753704-29753764)
chr1 (215-271)||(52029935-52029991)
chr1 (191-273)||(50901579-50901662)
chr1 (261-307)||(3679276-3679322)
chr1 (193-271)||(19528325-19528403)
chr1 (237-287)||(43446007-43446057)
chr1 (215-308)||(1094547-1094640)
chr1 (204-285)||(6650606-6650687)
chr1 (193-286)||(12259260-12259353)
chr1 (243-308)||(15167053-15167118)
chr1 (191-308)||(16893392-16893509)
chr1 (210-271)||(48615341-48615402)
chr1 (240-308)||(10526870-10526938)
chr1 (205-285)||(12993907-12993987)
chr1 (192-308)||(14787297-14787413)
chr1 (237-308)||(21392881-21392952)
chr1 (237-285)||(30203211-30203259)
[»] chr2 (41 HSPs)
chr2 (192-300)||(40416359-40416467)
chr2 (193-307)||(42922414-42922529)
chr2 (193-308)||(34041549-34041664)
chr2 (193-308)||(4060175-4060290)
chr2 (237-307)||(13803539-13803609)
chr2 (192-308)||(5147641-5147756)
chr2 (193-308)||(42602554-42602669)
chr2 (193-307)||(14500277-14500391)
chr2 (193-286)||(42327378-42327471)
chr2 (237-306)||(45026787-45026856)
chr2 (192-308)||(4438940-4439056)
chr2 (237-308)||(2750587-2750658)
chr2 (193-300)||(19244109-19244216)
chr2 (237-308)||(30410510-30410581)
chr2 (194-308)||(16918539-16918653)
chr2 (238-308)||(37755932-37756002)
chr2 (240-308)||(21303955-21304023)
chr2 (132-191)||(19466949-19467008)
chr2 (237-308)||(25637195-25637266)
chr2 (238-308)||(14780551-14780621)
chr2 (193-271)||(29503271-29503349)
chr2 (237-271)||(40791488-40791522)
chr2 (196-273)||(7415998-7416075)
chr2 (192-269)||(12994376-12994453)
chr2 (192-269)||(42860347-42860424)
chr2 (197-281)||(3001383-3001467)
chr2 (192-308)||(11062359-11062474)
chr2 (193-285)||(11251087-11251179)
chr2 (237-308)||(19322812-19322883)
chr2 (229-272)||(26545876-26545919)
chr2 (238-285)||(30943134-30943180)
chr2 (193-308)||(37480075-37480190)
chr2 (6-52)||(19467177-19467223)
chr2 (237-307)||(21195638-21195708)
chr2 (193-271)||(39714992-39715070)
chr2 (243-308)||(40755644-40755708)
chr2 (237-286)||(41908621-41908670)
chr2 (237-273)||(4262298-4262334)
chr2 (252-284)||(9318060-9318092)
chr2 (208-272)||(32650593-32650657)
chr2 (237-285)||(37971939-37971987)
[»] chr8 (33 HSPs)
chr8 (192-308)||(33017213-33017328)
chr8 (193-308)||(12988428-12988542)
chr8 (193-308)||(18540298-18540413)
chr8 (195-308)||(8794307-8794419)
chr8 (204-285)||(35690048-35690129)
chr8 (193-285)||(968362-968454)
chr8 (191-285)||(23361633-23361727)
chr8 (237-307)||(31408084-31408154)
chr8 (215-308)||(1157081-1157174)
chr8 (231-307)||(11928693-11928769)
chr8 (237-308)||(6536564-6536635)
chr8 (193-307)||(20994419-20994534)
chr8 (193-308)||(28783060-28783175)
chr8 (193-308)||(30483845-30483960)
chr8 (195-273)||(3624582-3624660)
chr8 (193-307)||(6569733-6569847)
chr8 (193-271)||(16852340-16852418)
chr8 (193-271)||(19703485-19703563)
chr8 (243-300)||(12205938-12205994)
chr8 (243-300)||(12450366-12450422)
chr8 (191-307)||(33727835-33727951)
chr8 (195-286)||(2203494-2203585)
chr8 (241-300)||(13129716-13129775)
chr8 (239-285)||(3305172-3305218)
chr8 (237-307)||(6436517-6436587)
chr8 (193-287)||(8059632-8059726)
chr8 (237-307)||(24675474-24675544)
chr8 (192-286)||(35287715-35287809)
chr8 (215-272)||(11492070-11492127)
chr8 (215-284)||(11942864-11942932)
chr8 (245-285)||(18386422-18386462)
chr8 (237-285)||(18897210-18897258)
chr8 (232-304)||(36627501-36627573)
[»] chr6 (27 HSPs)
chr6 (193-308)||(12188264-12188379)
chr6 (249-308)||(11306135-11306194)
chr6 (195-272)||(32613137-32613214)
chr6 (193-285)||(33549104-33549196)
chr6 (193-308)||(3779339-3779454)
chr6 (237-308)||(7320764-7320834)
chr6 (193-307)||(13330087-13330201)
chr6 (237-307)||(15951264-15951334)
chr6 (234-307)||(10650001-10650074)
chr6 (240-285)||(24256806-24256851)
chr6 (237-285)||(9583410-9583457)
chr6 (193-273)||(12234503-12234583)
chr6 (237-308)||(23910074-23910143)
chr6 (237-273)||(28841458-28841494)
chr6 (237-308)||(28363981-28364052)
chr6 (191-273)||(3715450-3715532)
chr6 (197-275)||(6776601-6776679)
chr6 (247-285)||(28028583-28028621)
chr6 (192-273)||(13227154-13227235)
chr6 (237-286)||(20863419-20863468)
chr6 (216-273)||(34786450-34786507)
chr6 (237-305)||(2092495-2092563)
chr6 (193-273)||(2616476-2616556)
chr6 (237-285)||(3907578-3907625)
chr6 (237-285)||(6691535-6691582)
chr6 (193-300)||(19637968-19638080)
chr6 (2-42)||(28843347-28843387)
[»] chr5 (32 HSPs)
chr5 (189-308)||(25627053-25627171)
chr5 (193-295)||(14285161-14285263)
chr5 (193-294)||(34984806-34984907)
chr5 (192-308)||(7918430-7918546)
chr5 (191-308)||(29075779-29075896)
chr5 (193-285)||(16773807-16773899)
chr5 (193-308)||(21549099-21549213)
chr5 (237-307)||(25979214-25979284)
chr5 (192-308)||(19043457-19043572)
chr5 (204-300)||(43442207-43442303)
chr5 (190-284)||(3252274-3252368)
chr5 (237-307)||(37258328-37258398)
chr5 (239-308)||(17155868-17155937)
chr5 (193-269)||(87423-87499)
chr5 (252-308)||(30000175-30000231)
chr5 (249-308)||(16638871-16638930)
chr5 (193-307)||(30700580-30700692)
chr5 (237-307)||(11375157-11375227)
chr5 (191-285)||(14495789-14495883)
chr5 (238-300)||(18595970-18596032)
chr5 (193-271)||(30883196-30883274)
chr5 (243-308)||(2269185-2269250)
chr5 (237-300)||(5156094-5156157)
chr5 (249-296)||(26078024-26078071)
chr5 (193-307)||(30735029-30735146)
chr5 (237-271)||(84868-84902)
chr5 (191-285)||(6844727-6844821)
chr5 (219-285)||(12669498-12669564)
chr5 (238-300)||(18974005-18974067)
chr5 (245-278)||(6629892-6629925)
chr5 (232-268)||(27123893-27123929)
chr5 (237-285)||(31074276-31074324)
[»] chr3 (39 HSPs)
chr3 (193-308)||(46518628-46518743)
chr3 (193-307)||(37788428-37788541)
chr3 (193-308)||(27093323-27093437)
chr3 (193-308)||(30311306-30311421)
chr3 (196-300)||(53412948-53413052)
chr3 (193-307)||(15048023-15048137)
chr3 (193-308)||(34062509-34062626)
chr3 (192-273)||(14186647-14186727)
chr3 (193-282)||(16354879-16354968)
chr3 (192-308)||(8170671-8170787)
chr3 (240-287)||(8796075-8796122)
chr3 (192-307)||(28703366-28703481)
chr3 (192-283)||(49494132-49494223)
chr3 (192-308)||(10445100-10445217)
chr3 (193-285)||(4222141-4222233)
chr3 (193-271)||(8368797-8368875)
chr3 (250-308)||(10969878-10969936)
chr3 (261-307)||(26673282-26673328)
chr3 (237-283)||(39253741-39253787)
chr3 (215-308)||(4844472-4844565)
chr3 (215-308)||(4870168-4870261)
chr3 (193-285)||(5499391-5499483)
chr3 (237-281)||(36010786-36010830)
chr3 (228-287)||(3427535-3427594)
chr3 (193-308)||(10499070-10499185)
chr3 (240-295)||(10828707-10828762)
chr3 (237-308)||(20501740-20501810)
chr3 (237-308)||(27259205-27259276)
chr3 (215-278)||(29563922-29563985)
chr3 (191-294)||(40063617-40063720)
chr3 (194-285)||(47454601-47454692)
chr3 (204-286)||(2709388-2709470)
chr3 (237-267)||(39976433-39976463)
chr3 (237-286)||(19154675-19154724)
chr3 (252-285)||(39041965-39041998)
chr3 (215-308)||(51903839-51903932)
chr3 (237-285)||(4252509-4252556)
chr3 (243-307)||(7902678-7902742)
chr3 (193-285)||(8051214-8051306)
[»] scaffold0070 (1 HSPs)
scaffold0070 (193-308)||(42482-42596)
[»] scaffold0004 (1 HSPs)
scaffold0004 (228-307)||(81526-81605)
[»] scaffold0063 (1 HSPs)
scaffold0063 (191-307)||(35351-35467)
[»] scaffold0238 (1 HSPs)
scaffold0238 (240-307)||(2673-2740)
[»] scaffold0118 (1 HSPs)
scaffold0118 (191-286)||(41616-41711)
[»] scaffold0187 (2 HSPs)
scaffold0187 (191-307)||(12383-12500)
scaffold0187 (191-307)||(22711-22828)
[»] scaffold0002 (1 HSPs)
scaffold0002 (196-285)||(94955-95044)
[»] scaffold0194 (1 HSPs)
scaffold0194 (215-286)||(13029-13100)
[»] scaffold0258 (1 HSPs)
scaffold0258 (193-285)||(15307-15399)
[»] scaffold0180 (1 HSPs)
scaffold0180 (204-300)||(19932-20027)
[»] scaffold0211 (1 HSPs)
scaffold0211 (193-308)||(24053-24168)
[»] scaffold0126 (1 HSPs)
scaffold0126 (237-288)||(25328-25379)
[»] scaffold0517 (1 HSPs)
scaffold0517 (193-286)||(7709-7802)
[»] scaffold0006 (1 HSPs)
scaffold0006 (238-308)||(18344-18413)
[»] scaffold0299 (1 HSPs)
scaffold0299 (206-275)||(11541-11610)


Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 20770720 - 20771025
Alignment:
Q  1 catattcaaatattcacatcttcgcataacacatcgtcaaattttacattcaaatgtacttgcagttaatcccacgacgtcatataaaattgtacataag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| ||||||| |||||||    
T  20770720 catattcaaatattcacatcttcgcataacacatcgtcaaattttacattcaaatgtacttgcatttaatcccacaatgtcatacaaaattg-acataag 20770818  T
Q  101 aggtatgttaatgannnnnnngtctcctatcgtcaaatcggactaactatgaatgcctggacaccatatatgacatcaacaatgcataacttaacccact 200  Q
    |||||||||| |||       ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20770819 aggtatgttactgatttttttgtctcctatcgtcaaatcggactaactatgaatgcttggacaccatatatgacatcaacaatgcataacttaacccact 20770918  T
Q  201 tgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  20770919 tgcgttggcctagggatattggcttgaaatctggatgtgtgttccttctcaaggtctcaagttcgattctctcaggtgccaatttgagggggttaattta 20771018  T
Q  301 acttctt 307  Q
    |||||||    
T  20771019 acttctt 20771025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 37109429 - 37109320
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||    
T  37109429 ttaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaggg 37109330  T
Q  291 ggttaattta 300  Q
    ||||| ||||    
T  37109329 ggttagttta 37109320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 307
Target Start/End: Complemental strand, 2185097 - 2184994
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaact 303  Q
    |||||||||| |||| || |||| || ||||  |||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||| |||| ||    
T  2185097 gttggcctagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggggttagtttagct 2184998  T
Q  304 tctt 307  Q
    ||||    
T  2184997 tctt 2184994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 7292871 - 7292759
Alignment:
Q  196 ccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtta 295  Q
    ||||||| ||||| |||| ||||||| |||| || ||||  |||||||||| ||||| |||||| ||||||||||||||  ||||||||||| |||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggtta 7292772  T
Q  296 atttaacttcttc 308  Q
     |||| |||||||    
T  7292771 gtttagcttcttc 7292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 38869783 - 38869883
Alignment:
Q  208 gcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||| ||||||| ||||  ||||||  |||||||||| |||||||||||| ||||||||| ||||| ||||||||||| ||||||| |||| ||||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttctt 38869882  T
Q  308 c 308  Q
    |    
T  38869883 c 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 44195038 - 44194946
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||  ||| |||||||| ||||| | ||||||||||||||| |||| |||||||||| ||||||||||| || |||| |||||||||||    
T  44195038 ggtattggtttggaatctggaagtgtgtttcttctcaaggtctcatgttcaattctctctggtgccaatttgagggagttagtttaacttctt 44194946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 4249221 - 4249292
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| |||||||||||| ||| ||||||||||| ||||||||||| ||||||| |||| |||||||    
T  4249221 gtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggttagtttagcttcttc 4249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 10048027 - 10048082
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtta 295  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  10048027 tgctccttctcatggtctcaggttcgattctctctgatgctaatttgaaggggtta 10048082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20770594 - 20770661
Alignment:
Q  1 catattcaaatattcacatcttcgcataacacatcgtcaaattttacattcaaatgtacttgcagtta 68  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||||||  |||||| |||||||||    
T  20770594 catattcaaatattcacatcttcacataacacatagttaaattttacattagaatgtagttgcagtta 20770661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 27372688 - 27372618
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||  | ||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  27372688 tgtgctcctctttaaggtcttaggttcgattatctctgatgccaatttgaaggggttaatttagcttcttc 27372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 7539637 - 7539704
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||||||||||||| ||||||||||||||  || ||||||| |||||||| ||||||||||||    
T  7539637 tgctccttctcaaggtctcaggttcgattctctcttctgtcaatttg-aggggttagtttaacttcttc 7539704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 23378000 - 23378071
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| |||||||||||| ||||||||||||||  ||||||||||| |||| || |||| |||||||    
T  23378000 gtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 51250598 - 51250484
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||| | ||||||| ||||  ||||||  |||||||||  |||||| ||||||||||||||| ||| | ||||||||||   |||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtggg 51250499  T
Q  293 ttaatttaacttctt 307  Q
     ||||||| ||||||    
T  51250498 ctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 31759736 - 31759619
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||||||| ||||  |||| ||||||| ||||  |  |||  |||||||||| ||||||||||||  ||||||||| |||| | ||||||||||||    
T  31759736 ttaacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctggtaccaatttgaagg 31759637  T
Q  291 ggttaatttaacttcttc 308  Q
    | ||| |||| |||||||    
T  31759636 gattagtttagcttcttc 31759619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 46545710 - 46545803
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||||||||| |||||||||| ||||||| ||||| | |||   |||||||||| |||||| |||||  ||||||| ||||||||| ||||||    
T  46545710 taacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctgatgtcaattt 46545803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 7949530 - 7949438
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| | |||||||| ||||||| ||||  | || |  |||||||||| |||||||||||| ||||||||||||||| || ||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 7949438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 15180793 - 15180853
Alignment:
Q  248 ctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||| |||| |||||||    
T  15180793 ctcaaggtcttaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 15180853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 28635695 - 28635811
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||| ||| | |||| |||||||  ||||||  |||||||||| ||  |||||| | ||||||||||||||| ||||||||||   ||    
T  28635695 taacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgg 28635794  T
Q  292 gttaatttaacttcttc 308  Q
    | ||||||| |||||||    
T  28635795 gctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 33632190 - 33632098
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||| |||| ||| |||  || ||||||| ||||||||| || | ||||||||||||| || |||||||| ||||||| |||||||||||    
T  33632190 ggtattggcttggaatatgggagtatgctcctcctcaaggtcccaggatcgattctctctggtgtcaatttgagggggttagtttaacttctt 33632098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 308
Target Start/End: Complemental strand, 37274540 - 37274420
Alignment:
Q  189 acttaacccacttgcgttggcctaggggta-ttgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    |||||||||||||| ||||||||||  ||| ||| ||||  | ||||  |||||||||| |||||||||| | ||||||||||||||| ||| ||||| |    
T  37274540 acttaacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaa 37274441  T
Q  288 aggggttaatttaacttcttc 308  Q
      ||| ||||||| |||||||    
T  37274440 gtgggctaatttagcttcttc 37274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 6666452 - 6666387
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||| |||||| ||||| ||||||||||||||| |||| |||||| ||||||| |||| |||||||    
T  6666452 tcctcctcaagatctcaggttcgattctctctggtgcccatttgagggggttagtttagcttcttc 6666387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 16581715 - 16581808
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||| |||| || ||||  || ||||||| |||||||||||| |||| ||| |||||| |||||||||||  |||||| |||| |||||||    
T  16581715 ggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaatttgagagggttagtttagcttcttc 16581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 21660220 - 21660139
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctct 274  Q
    |||| ||||| ||||| || | ||||||||||||| ||||||  |||||||| | ||| ||||||||||||||||| |||||    
T  21660220 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctct 21660139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 21668984 - 21668903
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctct 274  Q
    |||| ||||| ||||| || | ||||||||||||| ||||||  |||||||| | ||| ||||||||||||||||| |||||    
T  21668984 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctct 21668903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 31802098 - 31802037
Alignment:
Q  217 tattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatg 278  Q
    ||||||||||  ||||||| ||||| |||| |||||||||||| |||||| |||||||||||    
T  31802098 tattgacttgtgatctggaagtgtggtcctcctcaaggtctcatgttcgactctctctgatg 31802037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 51622529 - 51622578
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||||||||| |||||| |||||||| ||||||||||    
T  51622529 gtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttg 51622578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 21404850 - 21404790
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||| |||||||||||| ||| ||||||||||||| ||||||  ||||||||| ||||    
T  21404850 tgctcctcctcaaggtctcatgtttgattctctctgataccaattgaaaggggttagttta 21404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 29195139 - 29195186
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  29195139 gtgtgctcct-ctcaaggtcgcaagttcgattctctctaatgccaattt 29195186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 8030236 - 8030165
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| |||||||||||||||||||||| ||||  || |||||||   ||| ||||||| |||||||    
T  8030236 gtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 19680820 - 19680750
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||| | |||||||||| | ||||||||||||||| ||||||||| | | ||||| |||| ||||||    
T  19680820 gtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaatttaaggaggttagtttagcttctt 19680750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 32992656 - 32992690
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| ||||||||||||||||||||||||    
T  32992656 gtgtgctcctcctcaaggtctcaagttcgattctc 32992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 51969061 - 51969131
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||| |||||||| ||| ||||  ||||||||| |||||||||| | ||  ||||||||||||||    
T  51969061 gtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttggatggactaatttaacttctt 51969131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 31826608 - 31826685
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattc 269  Q
    ||||||||||| |||| ||||| ||||| | ||||  || ||   |||||||||| ||||||||||||||||||||||    
T  31826608 taacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattc 31826685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 46295141 - 46295190
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||||||||| ||||||||||| | | ||||||||||    
T  46295141 gtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttg 46295190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 49576926 - 49576877
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||||||||| |||||||||||||  ||| |||||||    
T  49576926 gtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttg 49576877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 1730566 - 1730450
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||| ||||| ||||||| ||||  | |||   ||||||||||  |||| ||||||  ||| |||||||||| ||| ||||||| |||    
T  1730566 taacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctggtgctaatttgagggg 1730467  T
Q  292 gttaatttaacttcttc 308  Q
     ||| |||| |||||||    
T  1730466 attagtttagcttcttc 1730450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 2622427 - 2622379
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||| | |||||| ||||||||||||||| |||||||||    
T  2622427 gtgtgctcctcctccatgtctcaggttcgattctctctggtgccaattt 2622379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 24991574 - 24991642
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||| |||||||||||| |||||||| |||||  | | ||||||| || |||| ||||||||||||    
T  24991574 tgctcctcctcaaggtctcaggttcgattttctctagtactaatttgagggagttagtttaacttcttc 24991642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 26459487 - 26459371
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  26459487 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaaggg 26459388  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  26459387 gttagtttagcttcttc 26459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 33869522 - 33869419
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| ||||||||||  |||||| ||||| | ||||| ||||||||||||||||||||||  ||||||||||||||| || |||||||| |||    
T  33869522 taacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctggtgtcaatttgagggg 33869423  T
Q  292 gtta 295  Q
    ||||    
T  33869422 gtta 33869419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 17113794 - 17113910
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| | ||||||||  |||||| |||  || ||||  ||||||| || |||||||||||||||||||||||||||||||| ||||||| |||    
T  17113794 taacccacttggggtggcctagttgtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaatttgagggg 17113893  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  17113894 gttagtttagcttcttc 17113910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 23552118 - 23552210
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||||| | ||||||||||  | ||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaattt 23552210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 307
Target Start/End: Complemental strand, 37162415 - 37162312
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaact 303  Q
    |||||||||| ||||  ||||||| || |||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||| ||    
T  37162415 gttggcctagtggtaaagacttgagatttgggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaatttgaggggattagtttagct 37162316  T
Q  304 tctt 307  Q
    ||||    
T  37162315 tctt 37162312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 43215184 - 43215298
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||| |||| ||||||| ||||  | || |  |||||||||| |||||||||||| |||||||||||||| |||||||||||| ||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgaggggg 43215283  T
Q  293 ttaatttaacttctt 307  Q
    ||| |||| ||||||    
T  43215284 ttagtttagcttctt 43215298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 39631843 - 39631959
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| ||||||| ||||  | ||||  ||  |||||| |||||||||||| ||||||||||||||  ||||||||||| |||    
T  39631843 taacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggg 39631942  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  39631943 gttagtttagcttcttc 39631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 29785341 - 29785263
Alignment:
Q  229 atctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||| |||||||||| |||||||||||| |||||||||| |||| ||||||||||| ||||||| |||| ||||||    
T  29785341 atctggaagtgtgctcctcctcaaggtctcatgttcgattctttctggtgccaatttgagggggttagtttagcttctt 29785263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 18363695 - 18363810
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| ||||| | ||||| || |||  |||||||||| |||||||||||| ||| ||||||||||  | |||||||| ||||    
T  18363695 taacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctctagtaccaatttg-aggg 18363793  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  18363794 gttagtttagcttcttc 18363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 287
Target Start/End: Original strand, 22760861 - 22760957
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    |||||||||||| ||||| || | ||||||||||||  | ||||  |||||||||| |||||||||||| ||||||||||| | |||||||||||||    
T  22760861 ttaacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaatttga 22760957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 17041088 - 17040973
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||| |||| || |||| ||||  ||||||| |||||||||| |||||||||||| |||||||||||||   ||||||||||   |||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtggg 17040989  T
Q  293 ttaatttaacttcttc 308  Q
    | |||||| |||||||    
T  17040988 tcaatttagcttcttc 17040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 25655304 - 25655189
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    ||||||| || |||||  ||| ||||||||||||  |||||   ||||| |||| |||||||| ||| ||||||||||||||| ||||||||||||||||    
T  25655304 aacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaatttgaagggg 25655205  T
Q  293 ttaatttaacttcttc 308  Q
    ||  |||| |||||||    
T  25655204 ttggtttagcttcttc 25655189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 48716280 - 48716383
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||  |||||| |||  ||||||||||| |||||||  ||||| |||| || |||||||||||    |||||||||| ||||||||||||||||    
T  48716280 aacccacttaagttggcttagtagtattgacttggaatctgggagtgtgttcctccttaaggtctcaag----attctctctgctgccaatttgaagggg 48716375  T
Q  293 ttaattta 300  Q
    ||||||||    
T  48716376 ttaattta 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 29538589 - 29538544
Alignment:
Q  242 ctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  29538589 ctccttctcaaggtctcaagttcgattctccctgatgccaatttga 29538544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 3377890 - 3377950
Alignment:
Q  131 cgtcaaatcggactaactatgaatgcctggacaccatatatgacatcaacaatgcataact 191  Q
    |||||||| ||||| ||||||||||  ||||||||||||| ||||||||||||||||||||    
T  3377890 cgtcaaataggactgactatgaatgtatggacaccatataagacatcaacaatgcataact 3377950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 2962456 - 2962574
Alignment:
Q  189 acttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaa 288  Q
    |||||||||||||| ||||| |||| |||||||  ||| || |||   |||||||||| |||||| ||||| |||||||||||||||   |||||||||     
T  2962456 acttaacccacttg-gttggtctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctggaaccaatttgag 2962554  T
Q  289 ggggttaatttaacttcttc 308  Q
    || |||| ||||||||||||    
T  2962555 ggagttagtttaacttcttc 2962574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 20335907 - 20335792
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||| |||| ||||||| ||||  |  |||  |||||||||| ||| |||||||| ||||||||||| | |||| ||||||| | |||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatggg 20335808  T
Q  293 ttaatttaacttcttc 308  Q
     |||||||||||||||    
T  20335807 ctaatttaacttcttc 20335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 21570060 - 21569997
Alignment:
Q  241 gctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaactt 304  Q
    |||||| ||||||||||||||||||||| |||||| || |||||||| ||||||| ||||||||    
T  21570060 gctcctcctcaaggtctcaagttcgattttctctggtgtcaatttgagggggttagtttaactt 21569997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 30217903 - 30217958
Alignment:
Q  217 tattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctct 272  Q
    ||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  30217903 tattggcttgatatctggaagtgtgctcctcctcaaggtctcaagttcgattctct 30217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 35119383 - 35119498
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||| ||| |||||||||| ||||||||||||  |||||| ||| ||||| | |||||| | ||| |||||||||||| | ||||||||||||  ||     
T  35119383 aacccatttgggttggcctagtggtattgacttgggatctgggtgtatgctcatcctcaagatttcaggttcgattctctttaatgccaatttgagagga 35119482  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  35119483 ttagtttatcttcttc 35119498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 21558173 - 21558243
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||||    ||||||||||| |||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 27255357 - 27255446
Alignment:
Q  217 tattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttct 306  Q
    |||||||||| ||| |||| || | ||||||||||| |||||| ||| |||| ||||||||| ||| |||| ||||||| ||||||||||    
T  27255357 tattgacttggaatttggaagtatactccttctcaaagtctcaggtttgattttctctgatgtcaaattgagggggttagtttaacttct 27255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 13106834 - 13106751
Alignment:
Q  216 gtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||| |||  ||||||| |||| ||||| |||||||||||| ||||||||||||||||||| |||||||  ||| |||||||    
T  13106834 gtattgatttgggatctgga-gtgtactcctcctcaaggtctcaggttcgattctctctgatgctaatttgagcgggctaattta 13106751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 30579335 - 30579427
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||| | ||||||| ||||| | ||||  |||| | ||| |||||||||||| |||||||| |||||| |||||||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaattt 30579427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 307
Target Start/End: Original strand, 24513796 - 24513911
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| ||||||| ||||| || |||  |||| || || ||  |||||||| |||||||| || |||||| |||||||   ||    
T  24513796 taacccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaatttgggtgg 24513895  T
Q  292 gttaatttaacttctt 307  Q
    | ||||||||||||||    
T  24513896 gctaatttaacttctt 24513911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 45976996 - 45976885
Alignment:
Q  196 ccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtta 295  Q
    ||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| || ||||| | ||||||  || |||||||||||||||| |   |||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggttttaagttcatttatctctgatgccaatttaagtaggtta 45976897  T
Q  296 atttaacttctt 307  Q
    ||||||||||||    
T  45976896 atttaacttctt 45976885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 4566506 - 4566412
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||| ||||||| |||||||||| |||||||||||   | || |  ||||  ||||||||||||||||| ||| ||||||||||| |||||||||    
T  4566506 ttaatccacttgggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctggtgccaattt 4566412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 15137552 - 15137646
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    ||||||||||| |||||||| | |||| |||||||  || | |  |||||||||| |||||||||||| ||| ||||||||||| || |||||||    
T  15137552 taacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttg 15137646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 27266783 - 27266872
Alignment:
Q  217 tattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttct 306  Q
    |||||||||| ||| || | || ||||| |||||||  ||||| ||| |||||||||||||| ||| |||| ||||||| ||||||||||    
T  27266783 tattgacttggaatttgaaagtatgctcattctcaaaatctcaggtttgattctctctgatgtcaaattgagggggttagtttaacttct 27266872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 41519335 - 41519258
Alignment:
Q  198 acttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctg 275  Q
    ||||| |||||||||| ||||||||||||  || | |  |||||||||| |||||||||||| ||||| |||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 11700212 - 11700271
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||||||  ||| |||||||    
T  11700212 tgctcctcctcaaggtctcaggttcgattctctctg-tgccaatttgagtgggctaattta 11700271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 307
Target Start/End: Original strand, 21877814 - 21877922
Alignment:
Q  199 cttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatt 298  Q
    |||| |||||||||| ||||||||||||  | ||||  | |||||||| || ||||||||| |||||||||||   | |||||| ||||  ||| |||||    
T  21877814 cttgagttggcctagtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgattctccacggtgccaaattgagtgggctaatt 21877913  T
Q  299 taacttctt 307  Q
    |||||||||    
T  21877914 taacttctt 21877922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 7721413 - 7721484
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||| ||||| |||||||||||| ||||||||||||||| || ||||||| | ||  ||||||| |||||||    
T  7721413 gtgtactcctcctcaaggtctcatgttcgattctctctggtgtcaatttggatggaataatttagcttcttc 7721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 7744141 - 7744074
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||| |||||||||||| ||| ||||||||||| ||| ||||||| ||||| | |||| ||||||    
T  7744141 tgctcctcctcaaggtctcaggtttgattctctctggtgcaaatttgagggggtcagtttagcttctt 7744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 22308103 - 22308170
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||| |||||||||| ||||||||||||| | ||||| |||||||| | | ||||||| ||||||    
T  22308103 tgctcctcctcaaggtcttaagttcgattctcaccgatgcaaatttgaatgagctaatttagcttctt 22308170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 23301678 - 23301563
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||| | ||||||||||||  |  |||  |||||||||| ||  |||||||||||| |||||||| |  ||| |||||||  ||     
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgagtgga 23301579  T
Q  293 ttaatttaacttcttc 308  Q
     |||||||||||||||    
T  23301578 ctaatttaacttcttc 23301563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 37094785 - 37094856
Alignment:
Q  229 atctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||| ||||| |||| ||||||||||||  || ||||||||||  ||| ||||||||||||||| ||||    
T  37094785 atctggaagtgtgatcctcctcaaggtctcacatttgattctctctagtgctaatttgaaggggttagttta 37094856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 48582863 - 48582820
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||| ||||||||||||||||| | |||||||||||||||||||    
T  48582863 tcctcctcaaggtctcaagttcaactctctctgatgccaatttg 48582820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 24438279 - 24438209
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||| |||| ||||| |||  |||||||||||||| || ||||||||| ||| ||||||| ||||||    
T  24438279 gtgtgctctttcttaaggtttcagattcgattctctctggtgtcaatttgaatgggctaatttagcttctt 24438209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 33222387 - 33222477
Alignment:
Q  210 ctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    |||| ||||||| ||||  | ||||| |||| ||| | |||||||||||| ||||||||||||||| || ||||||||  |||||| ||||    
T  33222387 ctagtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaatttgagagggttagttta 33222477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 2495911 - 2495798
Alignment:
Q  194 acccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggt 293  Q
    ||||||||| |||||||||    ||||||||||| || ||   |||||||||| || ||  ||||| |||||||| ||||| ||  |||||| || ||||    
T  2495911 acccacttgagttggcctaataatattgacttgagatttgtgagtgtgctcctccttaaaatctcaggttcgattatctctaatatcaatttaaatgggt 2495812  T
Q  294 taatttaacttctt 307  Q
    ||||||||||||||    
T  2495811 taatttaacttctt 2495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 27313763 - 27313718
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||||| |||||||| |||  ||||||||||||||||||||||||    
T  27313763 tgctcctcctcaaggtttcagattcgattctctctgatgccaattt 27313718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 29385775 - 29385726
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||||||||| ||| |||||||| || ||||||||||    
T  29385775 gtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttg 29385726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 30442486 - 30442567
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctct 272  Q
    |||||||||||| ||||||| || ||||||| ||||  | ||||  || ||||||| |||||||||| | ||||||||||||    
T  30442486 ttaacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 2882994 - 2883042
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||||||| |||| |||||||||| || ||||||    
T  2882994 gtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaattt 2883042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 3377675 - 3377719
Alignment:
Q  5 ttcaaatattcacatcttcgcataacacatcgtcaaattttacat 49  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||||    
T  3377675 ttcaaatattcacatcttcacataatacatcatcaaatttcacat 3377719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 5672607 - 5672531
Alignment:
Q  231 ctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||| ||||| || | ||||||||||||||||||||||||| |  |  |||||||| ||||||  |||||||||||    
T  5672607 ctggaagtgtgttcttcctcaaggtctcaagttcgattctctttagtctcaatttgagggggttggtttaacttctt 5672531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 5697659 - 5697583
Alignment:
Q  231 ctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||| ||||| || | ||||||||||||||||||||||||| |  |  |||||||| ||||||  |||||||||||    
T  5697659 ctggaagtgtgttcttcctcaaggtctcaagttcgattctctttagtctcaatttgagggggttggtttaacttctt 5697583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 7309400 - 7309436
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  7309400 gtgtgctcctcctcgaggtctcaagttcgattctctc 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 304
Target Start/End: Original strand, 7801179 - 7801291
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    |||||||||||  ||||||| | ||||||||||||  | ||||  ||||||||||  ||||||||||| ||||||  | ||| |||| |||||| |  ||    
T  7801179 taacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcgaacccctccgatgtcaatttaagtgg 7801278  T
Q  292 gttaatttaactt 304  Q
    | |||||||||||    
T  7801279 gctaatttaactt 7801291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 14058253 - 14058333
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    ||||| |||| |||||||| | ||||||| |||| || |||   |||||||| | |||||||||||| |||||||||||||    
T  14058253 aacccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 14368281 - 14368361
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    ||||| |||| |||||||| | ||||||| |||| || |||   |||||||| | |||||||||||| |||||||||||||    
T  14368281 aacccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 15905746 - 15905635
Alignment:
Q  196 ccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtta 295  Q
    ||||||| |||||||| | ||||||| ||||  | ||||  |||||||||| || | ||||||| ||||||||||| || ||| |||||||   ||||||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctta-ggtctcaggttcgattctccctaatgtcaatttgggtgggtta 15905648  T
Q  296 atttaacttcttc 308  Q
    ||||| |||||||    
T  15905647 atttagcttcttc 15905635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 31835236 - 31835284
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||||||| |||||||| || ||| |||||||||    
T  31835236 gtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattt 31835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 47824654 - 47824563
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||||||||| | |  || |||||||||| ||||| |||||| |||||||| |||| | || ||||||| || |||||||||| ||||||    
T  47824654 ggtattgacttgagaccatgaagtgtgctcctcctcaaagtctcatgttcgattgtctccggtgtcaatttg-agtggttaatttagcttctt 47824563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 33700847 - 33700735
Alignment:
Q  195 cccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtt 294  Q
    |||||||| |||||||||| ||||||| |||| |||||||  |||||||||| |||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggtt 33700748  T
Q  295 aatttaacttctt 307  Q
    | |||||||||||    
T  33700747 agtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 36371470 - 36371584
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| ||||||| |||| || ||||  |||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgaggggg 36371569  T
Q  293 ttaatttaacttctt 307  Q
    ||| |||| ||||||    
T  36371570 ttagtttagcttctt 36371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 8904414 - 8904526
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||||||||  |||||||||||  || ||   |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgaggggg 8904513  T
Q  293 ttaatttaacttc 305  Q
    ||| |||||||||    
T  8904514 ttagtttaacttc 8904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 2799874 - 2799977
Alignment:
Q  205 ttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaactt 304  Q
    ||||||||| ||||| | ||||| ||||||  |||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||| |||| |||    
T  2799874 ttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagctt 2799973  T
Q  305 cttc 308  Q
    ||||    
T  2799974 cttc 2799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 8177258 - 8177143
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||| ||| |||||||||| ||||||| ||||  ||||||  |||||||||| |||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  8177258 aacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgaggggg 8177159  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  8177158 ttagtttagcttcttc 8177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 4566548 - 4566662
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| | ||||| |||| || ||||  |||||||||| |||| ||||||| |||||||||||||||||| |||||| ||||||    
T  4566548 aacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtcaattt-aagggg 4566646  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  4566647 ttagtttagcttcttc 4566662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 1247117 - 1247227
Alignment:
Q  197 cacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaa 296  Q
    |||||| |||||| ||| |||| ||| |||||| ||||  |||| ||||| |||||||||||| ||||||||||||||| | |||||||||||||||||     
T  1247117 cacttgggttggcttagtggtactgatttgaaacctgggagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaatttgaaggggttat 1247216  T
Q  297 tttaacttctt 307  Q
    |||| ||||||    
T  1247217 tttagcttctt 1247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 9165272 - 9165164
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| ||||| |||||| |||| |||||||||| ||||||||||| |||    
T  9165272 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttgagggg 9165173  T
Q  292 gttaattta 300  Q
    |||| ||||    
T  9165172 gttacttta 9165164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 51814494 - 51814587
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| ||||||||   ||||||||||||| |||||   |||||||||| |||||||||||| ||||||||||||| | ||||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttg 51814587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 304
Target Start/End: Complemental strand, 15786393 - 15786286
Alignment:
Q  196 ccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtta 295  Q
    ||||||| ||||| ||||  |||||| ||||  ||||||  |||||||||| |||||||||||| |||||||||||| || || ||||||| ||||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaatttg-aggggtta 15786295  T
Q  296 atttaactt 304  Q
     ||||||||    
T  15786294 gtttaactt 15786286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 50919976 - 50920068
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||||||||||| |||   |||||||| | || ||||| ||| ||||||||||||||| || |||||||||||||||| |||| ||||||    
T  50919976 ggtattgacttgaaacctgagagtgtgctcatccttaaggtttcaggttcgattctctctggtgtcaatttgaaggggttagtttagcttctt 50920068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 11063600 - 11063671
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||| |||| |||||||||| | ||||||||||||||  ||||||||||||||||||| |||| |||||||    
T  11063600 gtgtgttcctcctcaaggtcttaggttcgattctctctagtgccaatttgaaggggttagtttagcttcttc 11063671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 35699963 - 35700068
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctca--agttcgattctctctgatgccaatttgaaggggttaatttaa 301  Q
    |||||||||| |||||||||||| || ||||| ||||||| || ||||||||||||   ||||||||||||||| || |||||| | ||||||  ||||     
T  35699963 gttggcctagtggtattgacttggaaactggaagtgtgcttctgctcaaggtctcaggggttcgattctctctggtgtcaatttaagggggttggtttag 35700062  T
Q  302 cttctt 307  Q
    ||||||    
T  35700063 cttctt 35700068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 17745334 - 17745218
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    ||||| |||||| |||||||||| ||||||| ||||  | |||   |||||||||| ||| |||||||| ||||||||||||||| || |||||| | |     
T  17745334 ttaacgcacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaattt-aggt 17745236  T
Q  291 ggttaatttaacttcttc 308  Q
    |||||||||| |||||||    
T  17745235 ggttaatttagcttcttc 17745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 29738253 - 29738313
Alignment:
Q  248 ctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||| ||||||||||||||||||| ||||| |||||| | ||||||||||| |||||||    
T  29738253 ctcaagatctcaagttcgattctctccgatgctaatttggatgggttaatttagcttcttc 29738313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 32524378 - 32524438
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    |||||||  ||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  32524378 tgctcctcttcaagatctcaagttcgattctctctggtgccaatttgagggggttagttta 32524438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 51703777 - 51703861
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctg 275  Q
    |||||||| ||| ||||| |||| ||||||| |||| |||||||  |||||||||| ||||| || ||| |||||||||||||||    
T  51703777 ttaacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctg 51703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 40810523 - 40810582
Alignment:
Q  249 tcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||||| ||||||||||||||| |||||||||||  |||||| |||| |||||||    
T  40810523 tcaaggtctcaggttcgattctctctggtgccaatttgagagggttagtttagcttcttc 40810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 3265968 - 3266018
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    |||||||||| |||||||||||| ||||||||||||||| | |||||||||    
T  3265968 gtgtgctcctcctcaaggtctcaggttcgattctctctggttccaatttga 3266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 29056446 - 29056492
Alignment:
Q  261 gttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||    
T  29056446 gttcgattatctctgatgccaatttaaaagggttaatttaacttctt 29056492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 31605880 - 31605831
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||||||||||||||||||||| | | ||||||||||    
T  31605880 gtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttg 31605831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 37400274 - 37400367
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||| ||||| ||||| || | ||||||| ||||| | ||| | |||||||||| || |||||||||||||||||||| || | ||||||||||    
T  37400274 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttg 37400367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 40257399 - 40257476
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattct 270  Q
    |||||||||| |||||||| | ||||||| ||||| | ||||  |||||||||| ||| ||||||||||||| |||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattct 40257476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 7743402 - 7743326
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgatt 268  Q
    ||||||||||| |||||||||| |||||| ||| | ||| |||  ||||| |||| ||| |||||||||||||||||    
T  7743402 taacccacttgggttggcctagtggtattaactaggaatttgggagtgtggtcctcctctaggtctcaagttcgatt 7743326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 21547556 - 21547464
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||| ||||| |||||||||| ||||||| ||||  |  |||  | |||||||| ||| |||| ||| |||||||||||||||||||||||||    
T  21547556 aaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaattt 21547464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 29753704 - 29753764
Alignment:
Q  248 ctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||||| ||||||||||||||| ||||||||| |  |||||| |||| |||||||    
T  29753704 ctcaaggtctcaggttcgattctctctggtgccaatttaagagggttagtttagcttcttc 29753764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 52029991 - 52029935
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    ||||||||||||| | || |  ||||||||||||||||||||||| |||||||||||    
T  52029991 ggtattgacttgagacctaggagtgtgctccttctcaaggtctcaggttcgattctc 52029935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 50901579 - 50901662
Alignment:
Q  191 ttaacccacttgcgttggcctaggggta-ttgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||||||||| |||||||||| |||| ||| ||||  | ||||  |||||||||| ||| ||||||||| ||||||||||||    
T  50901579 ttaacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc 50901662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 3679322 - 3679276
Alignment:
Q  261 gttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||||||||||| ||||||||||| ||||||| |||| ||||||    
T  3679322 gttcgattctctctggtgccaatttgagggggttagtttagcttctt 3679276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 19528403 - 19528325
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| |||||||| | ||||||| ||||  ||||    |||||||||| |||||||||||| |||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 43446007 - 43446057
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    |||||||||| |||||||||||| ||||||||||| | | |||||||||||    
T  43446007 gtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttga 43446057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 1094547 - 1094640
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||||| || |||   |||||||||| | | ||||||||| |||||||||||| | |||||||||    ||| |||||||||||||||    
T  1094547 ggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttcttc 1094640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 6650606 - 6650687
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||||||| ||||  ||| ||  || ||||||| ||||| |||||| ||||||||||||||| || ||||||    
T  6650606 gttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaattt 6650687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 12259260 - 12259353
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||| ||| | |||| |||||  || |||  |||||||||| ||| | |||||||||||||||||| | |||| |||||||    
T  12259260 aacccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctcaccgatgtcaatttg 12259353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 15167053 - 15167118
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||| ||| ||||||||  ||||||||| |||| |||||||||||| || |||||||| |||||||    
T  15167053 tcctcctcgaggtctcatattcgattctttctggtgccaatttgaatggattaatttagcttcttc 15167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 16893392 - 16893509
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||||||| |||| |||   ||||||| ||||| || |||  |||| ||||| ||| |||||||| |||||||| |||| | || ||||||||  |    
T  16893392 ttaacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtg 16893491  T
Q  291 ggttaatttaacttcttc 308  Q
    || ||||||| |||||||    
T  16893492 ggctaatttagcttcttc 16893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 48615402 - 48615341
Alignment:
Q  210 ctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||| |||||| ||||| |||||||  ||||||||||||||||||| |||| || |||||||    
T  48615402 ctagtggtattaacttggaatctgggagtgtgctccttctcaaggtttcaaatttgattctc 48615341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 10526870 - 10526938
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||| ||||||||||||  ||||||||||||||  | |||||||   ||||||||||| |||||||    
T  10526870 tgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatttagcttcttc 10526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 12993907 - 12993987
Alignment:
Q  205 ttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||| ||| |||||||||||| ||| | ||  |||||| |||||||| |||||| |||||||| |||||| ||| |||||    
T  12993907 ttggcttagtggtattgacttggaattttgaaatgtgcttcttctcaaagtctcaggttcgattatctctggtgctaattt 12993987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 14787413 - 14787297
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    |||| |||||| |||| ||||| ||||||||||||| | |||   ||||| | || |||||||| ||| |||||||||||||| ||  |||||| |  ||    
T  14787413 taactcacttgagttgacctagtggtattgacttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctctaatatcaatttaagtgg 14787314  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  14787313 gttagtttagcttcttc 14787297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 21392881 - 21392952
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattct-ctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| |||||||||||| ||||||| || ||||| ||||| |||||  ||| |||||||||||||||    
T  21392881 gtgtgctcctcctcaaggtctcaggttcgatcctcctctg-tgccagtttgagtgggctaatttaacttcttc 21392952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 30203259 - 30203211
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||| ||||| |||||||||||| |||| |||||||| |||||||||||    
T  30203259 gtgttctcctcctcaaggtctcaggttcaattctctccgatgccaattt 30203211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 40416467 - 40416359
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| |||||||||||| || ||||  || ||||||| || ||||||||| ||||||||||||||| |||||||||||||||    
T  40416467 taacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaatttgaaggg 40416368  T
Q  292 gttaattta 300  Q
    |||| ||||    
T  40416367 gttagttta 40416359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 42922414 - 42922529
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaa-ggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    |||||||||| |||||||||| ||||||| |||| || ||||  |||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaatttgatggg 42922513  T
Q  292 gttaatttaacttctt 307  Q
    |||| |||| ||||||    
T  42922514 gttagtttagcttctt 42922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 34041664 - 34041549
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| |||||||||||   |||||   |||||||||| |||||||||||| ||| ||||| ||||| ||||||||||| ||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaatttgaggggg 34041565  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  34041564 ttagtttagcttcttc 34041549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 4060290 - 4060175
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| |||||||  |||||| |||   ||||||| || |||||| ||||| ||||||||||||||| || |||||||| ||||    
T  4060290 aacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaatttgaggggg 4060191  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  4060190 ttagtttagcttcttc 4060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 13803539 - 13803609
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||| |||| ||||||    
T  13803539 gtgtgctcctcctcaaggtctcaggttcgattatctctgatgccaatttgagggggttagtttaccttctt 13803609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 5147756 - 5147641
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| ||||| |||| ||||||||||||| ||||||  || |||||||||||||||||||   |||||||||||||    |||||||| ||||    
T  5147756 taacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctcttgcaccaatttg-aggg 5147658  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  5147657 gttagtttagcttcttc 5147641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 42602554 - 42602669
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| ||||||| ||||  | ||||  ||||||||||||||||||||| | ||| ||||||||| | ||||||||||   |||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtggg 42602653  T
Q  293 ttaatttaacttcttc 308  Q
     ||||||| |||||||    
T  42602654 ctaatttagcttcttc 42602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 14500277 - 14500391
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    ||||||||||  ||||||||| |||||   ||||| ||||||  |||||||||| ||| ||||||||  |||||||||||||| ||||||||||| ||||    
T  14500277 aacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgaggggg 14500376  T
Q  293 ttaatttaacttctt 307  Q
     || |||| ||||||    
T  14500377 atagtttagcttctt 14500391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 42327471 - 42327378
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| |||||||||||| ||||||||||||  | ||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttg 42327378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 45026787 - 45026856
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttct 306  Q
    |||||||||| |||||||||||| ||| ||||||||||| ||||||||||| ||||||| |||| |||||    
T  45026787 gtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaatttgagggggttagtttagcttct 45026856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 4439056 - 4438940
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||  |||||| |||||  |||||   |||||||||| ||||||||| || |||||||||| |||| | |||||||||  ||    
T  4439056 taacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgattctttctggtaccaatttgagagg 4438957  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  4438956 gttagtttagcttcttc 4438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 2750658 - 2750587
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||| | |||||||||||| ||||||||||||||  ||||||||||| ||||||| |||| |||||||    
T  2750658 gtgtgctcttcctcaaggtctcatgttcgattctctctagtgccaatttgagggggttagtttagcttcttc 2750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 19244109 - 19244216
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||| |||  ||||||||||||  | |||   |||||||||| | |||||||||| ||||||||||||||| |||||||||||  |||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtggg 19244208  T
Q  293 ttaattta 300  Q
     |||||||    
T  19244209 ctaattta 19244216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 30410581 - 30410510
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| ||||||| |||| |||||||| |||||| ||||||||||| ||||||| |||| |||||||    
T  30410581 gtgtgctcctcctcaaggactcatgttcgattttctctggtgccaatttgagggggttagtttagcttcttc 30410510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 308
Target Start/End: Complemental strand, 16918653 - 16918539
Alignment:
Q  194 acccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggt 293  Q
    ||||||||| |||||||||| |||||||  |||  ||||||  |||||||||| |||||||||| | ||| ||||||||||| ||||| |||| | || |    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctggtgccactttggatggtt 16918554  T
Q  294 taatttaacttcttc 308  Q
    || |||| |||||||    
T  16918553 tagtttagcttcttc 16918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 37756002 - 37755932
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||||||||  ||| ||||||| |||||||    
T  37756002 tgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggctaatttagcttcttc 37755932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 21304023 - 21303955
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||| || ||||| ||| ||||||||||||||| || |||||||| |||||||||||| |||||||    
T  21304023 tgctcctcctgaaggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttcttc 21303955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 19467008 - 19466949
Alignment:
Q  132 gtcaaatcggactaactatgaatgcctggacaccatatatgacatcaacaatgcataact 191  Q
    ||||||| ||||||||||||||||| ||||| |||||||  |||||||||||||| ||||    
T  19467008 gtcaaataggactaactatgaatgcatggacgccatataaaacatcaacaatgcacaact 19466949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 25637195 - 25637266
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||||||| |||||||| ||||| ||||||| |||||||||||    ||| |||||||||||||||    
T  25637195 gtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttcttc 25637266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 14780551 - 14780621
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| ||||||||||| ||||||| ||| | |||||||||||||  ||| ||||||| |||||||    
T  14780551 tgtgctccttttcaaggtctcaggttcgatcctccccgatgccaatttgagtgggctaatttagcttcttc 14780621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 29503271 - 29503349
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| |||||||||| |||||||  |||  | ||||  |||||||||| |||||||||||| |||||||||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 271
Target Start/End: Complemental strand, 40791522 - 40791488
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||||||||||||||||||||||||||||    
T  40791522 gtgtgctccttctcaaggtctcaagttcgattctc 40791488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 7415998 - 7416075
Alignment:
Q  196 ccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    ||||||| ||||  |||| |||||||||||| |||||| | ||||| ||||||||||||| ||| ||| |||||||||    
T  7415998 ccacttgggttgatctagtggtattgacttgtaatctgtaagtgtgttccttctcaaggtttcatgtttgattctctc 7416075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 12994453 - 12994376
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattc 269  Q
    |||||| |||| ||||| |||| ||||||||||||  | ||||  |||||||||| || |||||||||||||||||||    
T  12994453 taacccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 42860347 - 42860424
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattc 269  Q
    ||||| ||||| |||||||| | | ||||||||||| | ||||  |||||||||| ||| ||||||||||||||||||    
T  42860347 taacctacttgagttggcctggtgatattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 3001383 - 3001467
Alignment:
Q  197 cacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgcca 281  Q
    |||||| |||||||||| ||||||||||||| |||| |  |||||||||| ||  || ||||| |||||||| |||||| |||||    
T  3001383 cacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgattatctctggtgcca 3001467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 11062359 - 11062474
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| | ||||| |||| ||  |||  ||||||| || |||||||||||| ||| ||||||||||  || ||||||| |||     
T  11062359 taacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaatttg-agga 11062457  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  11062458 gttagtttagcttcttc 11062474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 11251087 - 11251179
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||  |||||| ||| ||||||| ||||  |  |||| |||||||||| |||||||||||| ||| ||||||||||| || ||||||    
T  11251087 aacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaattt 11251179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 19322812 - 19322883
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||||  ||||||||||  ||| ||||||||||  ||||||||||| | ||||| ||||||||||||    
T  19322812 gtgtgctcctcttcaaggtctctggtttgattctctctagtgccaatttgaggaggttagtttaacttcttc 19322883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 26545876 - 26545919
Alignment:
Q  229 atctggatgtgtgctccttctcaaggtctcaagttcgattctct 272  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||    
T  26545876 atctggaagtgtgctccttctcgaggtctcaagtttgattctct 26545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 30943134 - 30943180
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  30943134 tgtgctcct-ctcaaggtctcaagtttgattctctcttatgccaattt 30943180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 37480075 - 37480190
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||| | ||||||| ||||  | |||   |||||||||| |||||||||||| ||||||||||| | | | ||||||||   |||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtggg 37480174  T
Q  293 ttaatttaacttcttc 308  Q
     ||||||| |||||||    
T  37480175 ctaatttagcttcttc 37480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 19467223 - 19467177
Alignment:
Q  6 tcaaatattcacatcttcgcataacacatcgtcaaattttacattca 52  Q
    |||||||||||||||||| |||||||||| |||||| || |||||||    
T  19467223 tcaaatattcacatcttcacataacacattgtcaaacttcacattca 19467177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 21195708 - 21195638
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||| |||||||||||| ||||||||| ||||  || ||||||| | ||| ||||||| ||||||    
T  21195708 gtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 39714992 - 39715070
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| |||||| | | ||||||||||||  | ||||  |||||||||| ||| |||||||| |||||||||||    
T  39714992 aacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 40755644 - 40755708
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||| |||||||||| | |||||||||||||||||| ||| ||| |||||||| |||| |||||||    
T  40755644 tcctcctcaaggtcttaggttcgattctctctgatgtcaacttg-aggggttagtttaccttcttc 40755708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 41908670 - 41908621
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| ||||||||||||||||||||| || | | ||||||||||    
T  41908670 gtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttg 41908621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 4262334 - 4262298
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||||||| |||||||||||| |||||||||||||    
T  4262334 gtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 9318092 - 9318060
Alignment:
Q  252 aggtctcaagttcgattctctctgatgccaatt 284  Q
    |||||||| ||||||||||||||||||||||||    
T  9318092 aggtctcaggttcgattctctctgatgccaatt 9318060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 32650657 - 32650593
Alignment:
Q  208 gcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctct 272  Q
    |||||| |||| |||||||| ||||||  |||| ||||| |||||||||||  ||||||||||||    
T  32650657 gcctagtggtactgacttgagatctgggagtgtactcctgctcaaggtctcgggttcgattctct 32650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 37971939 - 37971987
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||||||||| |||| |||||| ||||||||||||| | |||||||||    
T  37971939 gtgtgctccttgtcaaagtctcaggttcgattctctccggtgccaattt 37971987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 33017213 - 33017328
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||| |   ||||| |||| || ||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||    
T  33017213 taacccacttgggttggccttgtcatattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttg-aggg 33017311  T
Q  292 gttaatttaacttcttc 308  Q
    |||| ||||||||||||    
T  33017312 gttagtttaacttcttc 33017328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 12988428 - 12988542
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    ||||||||||  ||||||||| ||||||| |||| || ||||| |||||||||| |||||||| ||| ||||||| ||||||| |||||||||| |||||    
T  12988428 aacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaatttg-agggg 12988526  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  12988527 ttagtttagcttcttc 12988542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 18540298 - 18540413
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| ||||||| ||||  | ||||  |||| || || |||||||||||| ||||||||||||||| |||||||||||  |||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagaggg 18540397  T
Q  293 ttaatttaacttcttc 308  Q
    |||||||| |||||||    
T  18540398 ttaatttagcttcttc 18540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 8794419 - 8794307
Alignment:
Q  195 cccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtt 294  Q
    ||||||||  ||||| ||| ||||||| |||| || ||||| |||||||||| |||| ||||||| ||||||||||||||| | ||||||| ||||||||    
T  8794419 cccacttggattggcatagtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaattt-aaggggtt 8794321  T
Q  295 aatttaacttcttc 308  Q
    |||||| |||||||    
T  8794320 aatttagcttcttc 8794307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 35690129 - 35690048
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||||||| ||||  |||||| ||| ||||||| |||||||||||| ||||||||||||||| || ||||||    
T  35690129 gttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 35690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 968362 - 968454
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||| | ||||||| ||||  | ||||  |||||||||| ||| |||||||| ||||||||||||| |||||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaattt 968454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 23361727 - 23361633
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||||| |||| ||| | ||||||||||||  || |||  |||||||||| |||||||||||| |||| |||||||||| || ||||||    
T  23361727 ttaacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaattt 23361633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 31408154 - 31408084
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||| |||||||| ||| |||||||||||||| ||| |||||| | |||||||||||| ||||||    
T  31408154 gtgtgctcctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 1157081 - 1157174
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||||| || ||| | |||||||||||||  | ||||||||||| |||||||| ||| |||||||| | | | |||||||||||||||    
T  1157081 ggtattgacttggaacctgaaagtgtgctccttcttgatgtctcaagttcaattctctccgataccaatttggatgagctaatttaacttcttc 1157174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 11928769 - 11928693
Alignment:
Q  231 ctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||| |||||||||| ||| |||||||| ||||||||||  | |||| ||||||| | ||||||||||||||||||    
T  11928769 ctggaagtgtgctcctcctcgaggtctcaggttcgattcttaccgatgtcaatttggatgggttaatttaacttctt 11928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 6536564 - 6536635
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| |||||||||||| |||| |||||||||| |||||||||    ||||||||||| |||||||    
T  6536564 gtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 20994534 - 20994419
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctcct-tctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    |||||||||| |||||||||| ||||||||||||  | ||||  ||||||||||  ||||| |||||| | |||||| |||||| | |||||||| | ||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctggtaccaatttggatgg 20994435  T
Q  292 gttaatttaacttctt 307  Q
    | ||||||| ||||||    
T  20994434 gctaatttagcttctt 20994419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 28783060 - 28783175
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||| | | ||||||| ||||| | ||||  |||||||||| |||||||||||| |||||||||||   | ||||||||||   |||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtggg 28783159  T
Q  293 ttaatttaacttcttc 308  Q
     ||||||| |||||||    
T  28783160 ctaatttagcttcttc 28783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 30483960 - 30483845
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||||| || ||||||| ||||  || |||  |||||||||| ||||  |||||| |||| |||||||||  |||||||||||| ||     
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtgccaatttgaatgga 30483861  T
Q  293 ttaatttaacttcttc 308  Q
     ||||||| |||||||    
T  30483860 ctaatttatcttcttc 30483845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 3624582 - 3624660
Alignment:
Q  195 cccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||||| |||||||||| ||||||| ||||  | ||||  ||||||||||  ||||||||||| |||||||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 6569847 - 6569733
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||  |||||||||| | ||||| ||||  ||||||  |||||||||| ||  |||| ||| |||||||||||| || || |||||||| ||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaatttgaggggg 6569748  T
Q  293 ttaatttaacttctt 307  Q
    ||| |||| ||||||    
T  6569747 ttagtttagcttctt 6569733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 16852340 - 16852418
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| ||| |||||||| |||||||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 19703563 - 19703485
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| |||||||||| ||||||| ||||  | |||   |||||||||| |||||||||||| |||||||||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 12205994 - 12205938
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||||||| ||||| ||| |||| ||||||||||||||||||||||||| |||||    
T  12205994 tccttctcaagatctca-gtttgattatctctgatgccaatttgaaggggttgattta 12205938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 12450422 - 12450366
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||||||| ||||| ||| |||| ||||||||||||||||||||||||| |||||    
T  12450422 tccttctcaagatctca-gtttgattatctctgatgccaatttgaaggggttgattta 12450366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 33727951 - 33727835
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||| ||| |||| ||||| ||||| |  |||| |  |||| |||||||||| |||||||||||| ||||||||| ||||  || ||||||| | |    
T  33727951 ttaacccatttgggttgccctagtggtataggtttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatg 33727852  T
Q  291 ggttaatttaacttctt 307  Q
    || ||||||| ||||||    
T  33727851 ggctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 2203494 - 2203585
Alignment:
Q  195 cccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| |||||||||||| | || |||||| | | ||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttg 2203585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 13129716 - 13129775
Alignment:
Q  241 gctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    |||||| |||||||| ||| ||||||||||||||| |||||||||| | || ||||||||    
T  13129716 gctcctcctcaaggtttcaggttcgattctctctggtgccaatttggatggattaattta 13129775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 3305218 - 3305172
Alignment:
Q  239 gtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||| ||||||||||||| ||||||| |||||| |||||||||    
T  3305218 gtgctcctcctcaaggtctcaaattcgattatctctggtgccaattt 3305172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 6436587 - 6436517
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||| | ||||||||||  |||||||| ||||||  |||||||| | | ||||||||||||||||    
T  6436587 gtgtgctcctccgcaaggtctcagattcgattccctctgaaaccaatttggatgagttaatttaacttctt 6436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 287
Target Start/End: Original strand, 8059632 - 8059726
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    |||||||||| ||||||||   ||||||||||||  || ||   ||||| |||| |||||||||||| |||| |||||| |||||| ||||||||    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaatttga 8059726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 24675544 - 24675474
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||||||||||||||||  ||||||| |||||||||  |||||| | |   ||||||||||||||    
T  24675544 gtgtgctccttctcaaggtctcagattcgattttctctgatgttaatttggatgaactaatttaacttctt 24675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 35287715 - 35287809
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    ||||||||||| || ||||| | ||| ||| ||||| || | |  |||||||||| |||||||| ||| ||||||||||||| | ||||||||||    
T  35287715 taacccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttg 35287809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 11492127 - 11492070
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctct 272  Q
    ||||||| ||||| ||||||  |||||||||||||| |||||| | ||||||||||||    
T  11492127 ggtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctct 11492070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 11942932 - 11942864
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatt 284  Q
    ||||||| ||||| |||||||  ||||||| | || ||||||||| |||| |||||||||||||||||||    
T  11942932 ggtattggcttgagatctggaaatgtgctcttccttaaggtctca-gttcaattctctctgatgccaatt 11942864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 18386462 - 18386422
Alignment:
Q  245 cttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||||||||| || ||||||| |||||||||||||    
T  18386462 cttctcaaggtctcaaatttgattctcactgatgccaattt 18386422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 18897210 - 18897258
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||||||| ||||||||||  ||| |||||||||    
T  18897210 gtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaattt 18897258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 36627573 - 36627501
Alignment:
Q  232 tggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaactt 304  Q
    |||| ||||||||||  ||||| ||||| |||  ||||||| | ||| |||||||||||||||| ||||||||    
T  36627573 tggaagtgtgctcctcttcaagatctcatgtttaattctctttaatgtcaatttgaaggggttagtttaactt 36627501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 12188379 - 12188264
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| |||||||| ||||||||||||||||||  ||||||||||| ||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgaggggg 12188280  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  12188279 ttagtttagcttcttc 12188264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 11306194 - 11306135
Alignment:
Q  249 tcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||| |||| |||||||    
T  11306194 tcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 11306135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 32613214 - 32613137
Alignment:
Q  195 cccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctct 272  Q
    |||||||| |||||||| | ||||||||||||   |||||  ||||||||||||||||| ||||| ||||||||||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctct 32613137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 33549104 - 33549196
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||||| || | ||||||| ||||  | ||||  |||||||||| ||| |||||||| ||||||||||||| |||||||||||    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 33549196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 3779339 - 3779454
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||  |||| ||||| ||||||| ||||| |  |||  |||||||||||||||||||||||  ||| |||| |||||||| ||||||  |  ||    
T  3779339 aacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattcaattccctctgatgtcaattttgatagg 3779438  T
Q  293 ttaatttaacttcttc 308  Q
     |||||||||||||||    
T  3779439 ataatttaacttcttc 3779454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 7320834 - 7320764
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| || ||||||||| || ||||||||| || |||||||||||| ||||||||||| |||||||    
T  7320834 gtgtgctcctcctgaaggtctcaggt-cgattctctatggtgccaatttgaatgggttaatttagcttcttc 7320764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 13330087 - 13330201
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||| ||||| |||||||||||  ||  |||  ||  |||||| ||||||||||||  |||||||||||||  |||||||||||  |||    
T  13330087 aacccacttgggttgacctagtggtattgactttgaacttgggagtaagctcctcctcaaggtctcagattcgattctctcttgtgccaatttgagaggg 13330186  T
Q  293 ttaatttaacttctt 307  Q
    ||| |||| ||||||    
T  13330187 ttagtttagcttctt 13330201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 15951334 - 15951264
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||| |||||||||||| |||| |||||||||| | |||||||||  |||||| |||| ||||||    
T  15951334 gtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaatttgagagggttagtttagcttctt 15951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 10650074 - 10650001
Alignment:
Q  234 gatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||||||  ||||||||||| ||| ||||||||| | |||||  ||||| ||| ||||||||||||||    
T  10650074 gatgtgtgctcctcttcaaggtctcaggtttgattctctccggtgccagcttgaacgggctaatttaacttctt 10650001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 24256851 - 24256806
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||| |||||||||||||||||||||||||||||| || ||||||    
T  24256851 tgctcattctcaaggtctcaagttcgattctctctggtgtcaattt 24256806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 9583410 - 9583457
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  9583410 gtgtgctcct-ctcaaggtctccagttcgattctctctggtgccaattt 9583457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 12234583 - 12234503
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||||||  |||||||| | ||||||||||||  | ||||  ||||||||| |||| |||||||| |||||||||||||    
T  12234583 aacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 23910143 - 23910074
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| |||||||||||| ||||||   |||||| ||||||||||| ||||||| |||| |||||||    
T  23910143 gtgtgctcctcctcaaggtctcaggttcga--atctctggtgccaatttgagggggttagtttagcttcttc 23910074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 28841458 - 28841494
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||||||| ||||||||||||||||||||||||||    
T  28841458 gtgtgctcctcctcaaggtctcaagttcgattctctc 28841494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 28363981 - 28364052
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| ||||||||||||  ||||||| |||||| || ||||||| | ||| |||||||| ||||||    
T  28363981 gtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggctaatttaatttcttc 28364052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 3715450 - 3715532
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||||| ||  ||||| |||| ||||||||||||| ||||||  || |||| ||  || ||||||||||||||||||||||    
T  3715450 ttaacccattttggttgggctagtggtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctc 3715532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 6776679 - 6776601
Alignment:
Q  197 cacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctg 275  Q
    |||||| |||||||| | ||||||| ||||  ||||||  |||||||||| ||| | |||||||||| |||||||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctg 6776601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 28028583 - 28028621
Alignment:
Q  247 tctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  28028583 tctcaaggtctcatgttcgattctccctgatgccaattt 28028621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 13227235 - 13227154
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    ||||||||||| |||||||  | |||||||   ||| ||||||  |||||||||| ||| | ||||||||||||||||||||    
T  13227235 taacccacttgggttggccatgtggtattggtatgagatctgggagtgtgctcctcctcgaagtctcaagttcgattctctc 13227154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 20863419 - 20863468
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| ||||||||||||  || |||||||||| |||||||||||    
T  20863419 gtgtgctcctcctcaaggtctcagatttgattctctctaatgccaatttg 20863468  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 34786507 - 34786450
Alignment:
Q  216 gtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||| ||||  ||||||  |||||||||||||| | ||||||||||||||||||||    
T  34786507 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 34786450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 2092563 - 2092495
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttc 305  Q
    |||||||||| ||||||||||||| || |||| |||||| |   ||||||| ||||||| |||||||||    
T  2092563 gtgtgctcctgctcaaggtctcaaatttgattttctctggtattaatttgagggggttagtttaacttc 2092495  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 2616476 - 2616556
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    |||||| ||| |||||||||| ||||||  |||||    |||| ||||||||||  ||||||||||||||||| |||||||    
T  2616476 aacccatttgggttggcctagtggtattagcttgagtcatggaagtgtgctcctcttcaaggtctcaagttcgtttctctc 2616556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 3907578 - 3907625
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||||||    
T  3907578 gtgtgctcct-ctcaagatttcaagttcgattctctctggtgccaattt 3907625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 6691582 - 6691535
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||||||| ||||||||||||| | |||||||||    
T  6691582 gtgtgctcct-ctcaaggtctcaggttcgattctctccggtgccaattt 6691535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 19638080 - 19637968
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcga-----ttctctctgatgccaatttga 287  Q
    |||||||||||||||| | || ||||||| | || || ||||  |||||||||  |||||||||||| ||| ||     ||||||||| |||||||||||    
T  19638080 aacccacttgcgttggtccagtggtattggcgtggaacctgggagtgtgctccagctcaaggtctcaggtttgattctcttctctctggtgccaatttga 19637981  T
Q  288 aggggttaattta 300  Q
     ||||||| ||||    
T  19637980 gggggttagttta 19637968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 28843387 - 28843347
Alignment:
Q  2 atattcaaatattcacatcttcgcataacacatcgtcaaat 42  Q
    ||||||||||||||| ||||||  |||||||||||||||||    
T  28843387 atattcaaatattcatatcttcatataacacatcgtcaaat 28843347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 25627053 - 25627171
Alignment:
Q  189 acttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaa 288  Q
    |||||||||||||| |||||||||| ||||||| |||| ||  |||  |||||||||| |||||||||||| ||||||||||||||| || ||||||| |    
T  25627053 acttaacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttg-a 25627151  T
Q  289 ggggttaatttaacttcttc 308  Q
    ||||||| |||| |||||||    
T  25627152 ggggttagtttagcttcttc 25627171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 14285161 - 14285263
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||||| || || |||| |||| || ||||  |||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||    
T  14285161 aacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaggggg 14285260  T
Q  293 tta 295  Q
    |||    
T  14285261 tta 14285263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 34984806 - 34984907
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||| |||| ||||||| |||| || ||||  |||||||||| |||||||||| | ||||||||||||||| ||||||||||| ||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaatttgaggggg 34984905  T
Q  293 tt 294  Q
    ||    
T  34984906 tt 34984907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 7918546 - 7918430
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| ||||||| |||| || ||||  |||  ||||| |||||||||| | ||||||||||||||| ||||||||||| |||    
T  7918546 taacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctggtgccaatttgagggg 7918447  T
Q  292 gttaatttaacttcttc 308  Q
     ||| |||| |||||||    
T  7918446 tttagtttagcttcttc 7918430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 29075779 - 29075896
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||||||| ||| |||||| ||||||| ||||  ||||||  |||||||||| ||| || ||||| ||||||||||||||| |||||||||  | |    
T  29075779 ttaacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatg 29075878  T
Q  291 ggttaatttaacttcttc 308  Q
    || ||||||| |||||||    
T  29075879 ggctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 16773807 - 16773899
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||||| || | ||||||||||||  | ||||  |||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaattt 16773899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 21549213 - 21549099
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| ||||||| ||||  | ||||  |||||||||| || || ||||||||||||||| |||||  |||||||||| |||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaatttg-agggg 21549115  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  21549114 ttagtttagcttcttc 21549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 25979214 - 25979284
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||| ||||| |||||||||||| |||||||||||||| ||| |||||||| |||||||||||| ||||||    
T  25979214 gtgttctcctcctcaaggtctcaggttcgattctctcttatgtcaatttgatggggttaatttagcttctt 25979284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 19043457 - 19043572
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| |||||||||| | |||||||||| ||  |||  ||||| |||||||||| |||||| |||| || ||||||  |||||||||| ||||    
T  19043457 taacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggttcaatcctctctagtgccaatttg-aggg 19043555  T
Q  292 gttaatttaacttcttc 308  Q
    |||| |||| |||||||    
T  19043556 gttagtttagcttcttc 19043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 43442207 - 43442303
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    |||||| ||| |||||||  |||| ||||||  |||||||||| |||||||||||| ||||||||||||||| || ||||||| | ||| |||||||    
T  43442207 gttggcatagtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaattta 43442303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 3252368 - 3252274
Alignment:
Q  190 cttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatt 284  Q
    ||||||||||||| |||||||||| ||||||||||||| |  |||  |||  ||| | |||| | ||||| ||||||||||||||||||||||||    
T  3252368 cttaacccacttgggttggcctagtggtattgacttgagacttgggagtgcactcttcctcaggctctcaggttcgattctctctgatgccaatt 3252274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 37258398 - 37258328
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||||| |||||||| ||| ||||||||||||||| || |||||||| ||||||| |||| ||||||    
T  37258398 gtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt 37258328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 17155868 - 17155937
Alignment:
Q  239 gtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||| |||||||||||| ||| |||||||| || |||||||||||  ||| |||||||||||||||    
T  17155868 gtgctcctcctcaaggtctcaggtttgattctctgtgctgccaatttgagtgggctaatttaacttcttc 17155937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 87499 - 87423
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattc 269  Q
    |||||||||  |||||||||| ||||||| |||| |||||||  |||||||||| |||||||||||| ||| |||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc 87423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 30000175 - 30000231
Alignment:
Q  252 aggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||| |||||| |||||||||||||||||| |  |||||||||||||||||||    
T  30000175 aggtctcaggttcgactctctctgatgccaatttaagtgggttaatttaacttcttc 30000231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 16638871 - 16638930
Alignment:
Q  249 tcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||| ||||| |||||||||||||| || |||||||||  |||||||||||||||||||    
T  16638871 tcaagatctcatgttcgattctctcttataccaatttgagagggttaatttaacttcttc 16638930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 30700692 - 30700580
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||  ||||||||||  ||||||||||| || |||   | ||||||||||| ||||||||| |||| ||| |||||| || |||||  ||||||    
T  30700692 aacccacttaggttggcctagtcgtattgacttgtaacctga--gagtgctccttcttaaggtctcaggttcaattatctctggtgtcaattgaaagggg 30700595  T
Q  293 ttaatttaacttctt 307  Q
    ||| |||||||||||    
T  30700594 ttagtttaacttctt 30700580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 11375227 - 11375157
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||| |||| ||||| |||||||||||||||||||| |||| ||||||| | | ||||||||| ||||||    
T  11375227 gtgtgttcctcctcaatgtctcaagttcgattctctccgatgtcaatttggatgagttaatttatcttctt 11375157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 14495883 - 14495789
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||| ||| ||||| || | ||||||||||||  ||||||  |||||||||| ||| ||||||||  || ||||||||| |||||||||||    
T  14495883 ttaacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaattt 14495789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 18596032 - 18595970
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||||| |||||||||| | |||||||| |||||| ||||||||||| ||||||| ||||    
T  18596032 tgtgctcctcctcaaggtcttaggttcgattttctctggtgccaatttgagggggttagttta 18595970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 30883274 - 30883196
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| ||||| |||| ||||||| ||||  | ||||  |||||||||| ||||||||||||||||| ||||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctc 30883196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 2269250 - 2269185
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||| ||||||||||||| ||||||| ||||||||  |||||||| ||||||| |||| |||||||    
T  2269250 tcctcctcaaggtctcaaattcgattatctctgataacaatttgagggggttattttagcttcttc 2269185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 5156157 - 5156094
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||| ||||| |||||||||  |||||||||||||| || ||||||||  |||||||||||    
T  5156157 gtgtgcttcttctgaaggtctcagattcgattctctctggtgtcaatttgagagggttaattta 5156094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 26078071 - 26078024
Alignment:
Q  249 tcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaa 296  Q
    ||||||||||| ||||||||||||||  ||||||||||| ||||||||    
T  26078071 tcaaggtctcaggttcgattctctctagtgccaatttgagggggttaa 26078024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 30735146 - 30735029
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtg---ctccttctcaaggtctcaagttcgattctctctgatgccaatttgaag 289  Q
    |||||||||| |||| |||||  ||||||||||| || |||   |||||   ||||| |||||  ||||||||||||||  |||||||| |||||||| |    
T  30735146 aacccacttgggttgacctagtcgtattgacttgtaacctgagagtgtgctcctcctcctcaaaatctcaagttcgattacctctgatgtcaatttgagg 30735047  T
Q  290 gggttaatttaacttctt 307  Q
    |||||| |||| ||||||    
T  30735046 gggttagtttagcttctt 30735029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 84868 - 84902
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||||||| ||||||||||||||||||||||||    
T  84868 gtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 6844727 - 6844821
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||||| |||||||  | |||||||||||| ||| |||  ||||| |||| ||| |||||| | |||||||| |||||  |||||||||    
T  6844727 ttaacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaattt 6844821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 12669498 - 12669564
Alignment:
Q  219 ttgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||| ||||| ||  |||||| ||||| ||||| ||||||||||||||||||| || ||||||    
T  12669498 ttgacttggaatcttgaaatgtgcttcttcttaaggtttcaagttcgattctctctggtgtcaattt 12669564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 18974005 - 18974067
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    ||||||||| |||||||| ||| ||||||||||| ||| |||||||||||  |||||| ||||    
T  18974005 tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtgggttagttta 18974067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 6629925 - 6629892
Alignment:
Q  245 cttctcaaggtctcaagttcgattctctctgatg 278  Q
    |||||||||||||||||||||||| |||||||||    
T  6629925 cttctcaaggtctcaagttcgattatctctgatg 6629892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 27123929 - 27123893
Alignment:
Q  232 tggatgtgtgctccttctcaaggtctcaagttcgatt 268  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  27123929 tggatgtgtactccttctcgaggtctcaagttcgatt 27123893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 31074276 - 31074324
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||| |||| |||||| ||||| ||||||||||||||| |||||||||    
T  31074276 gtgtgttcctcctcaagatctcaggttcgattctctctggtgccaattt 31074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 46518628 - 46518743
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||| ||| ||||||| ||||  ||||||  |||||||||| |||||||| ||| ||| ||||||||||||||||||||||| ||||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgaggggg 46518727  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  46518728 ttagtttagcttcttc 46518743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 37788541 - 37788428
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| ||||||| || |||||||||||| || || |  |||||||||| |||||||||||| ||||||||||||||  |||||||||| |||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttg-agggg 37788443  T
Q  293 ttaatttaacttctt 307  Q
    |||||||| ||||||    
T  37788442 ttaatttagcttctt 37788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 27093437 - 27093323
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||| ||||||| |||| ||  |||  |||||||||| |||||||||||| ||| ||||||||||| |||||||||||| |||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgaa-ggg 27093339  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  27093338 ttagtttatcttcttc 27093323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 30311306 - 30311421
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    ||||||| || |||||||||| ||||| | ||||  ||||||  |||||||||| |||||||||||| |||||||||||| || ||||||||||| ||||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgaggggg 30311405  T
Q  293 ttaatttaacttcttc 308  Q
    ||| |||| |||||||    
T  30311406 ttagtttagcttcttc 30311421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 53412948 - 53413052
Alignment:
Q  196 ccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtta 295  Q
    ||||||| ||||| |||| ||||||| |||| || ||||  |||||||||| |||||||||||| |||| |||||||||| ||||||||||| |||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagggggtta 53413047  T
Q  296 attta 300  Q
     ||||    
T  53413048 gttta 53413052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 15048137 - 15048023
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||| ||  ||||| | ||||  ||||||   ||||||||| |||||||||||| |||||||| |||||| ||||||||||| ||||    
T  15048137 aacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgaggggg 15048038  T
Q  293 ttaatttaacttctt 307  Q
    ||| |||||||||||    
T  15048037 ttagtttaacttctt 15048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 34062626 - 34062509
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctc--cttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||||| ||||||| || | ||||| |||||||| |||  ||||||||  || |||||||||||| |||| |||||||||| ||||||||||| |     
T  34062626 aacccacttgggttggcccagtgatattggcttgaaatttgggagtgtgctctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagga 34062527  T
Q  291 ggttaatttaacttcttc 308  Q
     |||| ||||||||||||    
T  34062526 tgttagtttaacttcttc 34062509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 14186647 - 14186727
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc 273  Q
    ||||||||||| |||||||||| ||||||| ||||  | ||||| |||||||||| |||||||||||| |||||||||||||    
T  14186647 taacccacttgggttggcctagtggtattgtcttgggacctgga-gtgtgctcctcctcaaggtctcaggttcgattctctc 14186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 16354968 - 16354879
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaa 282  Q
    |||||||||| |||||||||| ||||||| |||| || |||   |||||||||| |||| ||||||| ||||||||||||||| ||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctggtgccaa 16354879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 8170671 - 8170787
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||| ||| |||||||||| ||||||| |||||||  |||  |||||||||| |||||||||||| ||||||||  ||||| || |||||||   ||    
T  8170671 taacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttgggtgg 8170770  T
Q  292 gttaatttaacttcttc 308  Q
    | |||||||| ||||||    
T  8170771 gctaatttaaattcttc 8170787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 8796122 - 8796075
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8796122 tgctcctcctcaaggtctcaagttcgattctctctgatgctaatttga 8796075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 28703481 - 28703366
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggg 291  Q
    ||||||||||| ||||| | || | ||||  ||||  ||||||  ||||||||||  ||||||||||| ||||||||||||||| ||||||||||| | |    
T  28703481 taacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttgaggag 28703382  T
Q  292 gttaatttaacttctt 307  Q
    |||| |||| ||||||    
T  28703381 gttagtttagcttctt 28703366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 49494223 - 49494132
Alignment:
Q  192 taacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaat 283  Q
    |||| |||||| ||| |||||| |||||||||||||||| |||  |||||||| | ||| |||||||| ||| ||||||| |||||||||||    
T  49494223 taactcacttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtctcaggtttgattctccctgatgccaat 49494132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 10445217 - 10445100
Alignment:
Q  192 taacccacttgcgttggcctaggggta-ttgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    ||||||||||| |||||||||| || | ||| ||||  | ||||  |||||||||| ||| |||||||| ||||||||||||||| ||| |||||||  |    
T  10445217 taacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtg 10445118  T
Q  291 ggttaatttaacttcttc 308  Q
    || ||||||| |||||||    
T  10445117 ggctaatttagcttcttc 10445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 4222141 - 4222233
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||| ||| ||||||| ||||  ||||||  |||||||||| ||||| |||| | ||||||||||||||| || ||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaattt 4222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 8368875 - 8368797
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctc 271  Q
    |||||| ||| |||||||||| ||||||||||||||| ||||  |||||||| | ||| |||||||| ||| |||||||    
T  8368875 aacccaattgagttggcctagtggtattgacttgaaacctggtagtgtgctcatcctcgaggtctcaggtttgattctc 8368797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 10969936 - 10969878
Alignment:
Q  250 caaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| ||||||||||||||| ||||||||| | ||||||| |||| |||||||    
T  10969936 caaggtctcaggttcgattctctctggtgccaatttaagggggttagtttagcttcttc 10969878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 26673282 - 26673328
Alignment:
Q  261 gttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  26673282 gttcaattctctctgatgccaatttgagtgggttaatttaacttctt 26673328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 39253741 - 39253787
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaat 283  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  39253741 gtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 4844565 - 4844472
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||||||  ||||||  |||||||||| ||| |||||||| | ||||||||||| | ||||||||||   ||| ||||||| |||||||    
T  4844565 ggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 4870261 - 4870168
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||||||  ||||||  |||||||||| ||| |||||||| | ||||||||||| | ||||||||||   ||| ||||||| |||||||    
T  4870261 ggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 5499483 - 5499391
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||| | ||||||||||||| |||||   |||||||||| || ||||||| | |||| |||||| | | |||||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtctaaggttctattctccccggtgccaattt 5499391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 36010786 - 36010830
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgcca 281  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||    
T  36010786 gtgtgctcctcctcaaagtctcaagttcgattctctctggtgcca 36010830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 3427594 - 3427535
Alignment:
Q  228 aatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttga 287  Q
    |||||||  |||||||||| ||||||||||||  |||||||||||||  |||||||||||    
T  3427594 aatctgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaatttga 3427535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 10499185 - 10499070
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||| | ||||||| ||||  ||||||  || ||||| | ||  |||||||| ||||||||||||| |||| |||||||   |||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtggg 10499086  T
Q  293 ttaatttaacttcttc 308  Q
     ||||||| |||||||    
T  10499085 ctaatttagcttcttc 10499070  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 10828762 - 10828707
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggtta 295  Q
    ||||||| || ||||||||| |||||||| ||| |||||||||||||| |||||||    
T  10828762 tgctcctacttaaggtctcaggttcgattatctatgatgccaatttgagggggtta 10828707  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 20501740 - 20501810
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| || ||||||||| |||||||||||||   |||||||||| ||||| ||||||| |||||||    
T  20501740 gtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttg-aggggctaatttagcttcttc 20501810  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 27259205 - 27259276
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    |||||||||| ||| |||| ||| ||| |||||||||||||| |||||||| ||||||| |||  |||||||    
T  27259205 gtgtgctcctcctcgaggtttcaggtttgattctctctgatgtcaatttgagggggttagttttgcttcttc 27259276  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 29563922 - 29563985
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatg 278  Q
    ||||||| ||||| ||||||| ||||||| || ||| | |||||| ||||||||||||||||||    
T  29563922 ggtattggcttgagatctggaagtgtgcttctcctcgaagtctcaggttcgattctctctgatg 29563985  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 40063617 - 40063720
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||||||| |||| | |||  |||||| ||||  |||||   || ||||||| || |||||||||||||||||||||||   ||||||||||| ||    
T  40063617 ttaacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaatttgaggg 40063716  T
Q  291 ggtt 294  Q
    ||||    
T  40063717 ggtt 40063720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 47454692 - 47454601
Alignment:
Q  194 acccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||||||| ||||  |||| ||||||| ||||| |||| |  |||||||||| ||| |||||||| ||||||||||| |  ||||||||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaattt 47454601  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 2709388 - 2709470
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| |||||||  |||  ||||||| || ||||||| ||| |||| | | ||| ||||||||||||||||||||||    
T  2709388 gttggcctagtggtattgtgttgggatctggaagtatgctcctcctcgaggttttaggtttgattctctctgatgccaatttg 2709470  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 39976463 - 39976433
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgat 267  Q
    |||||||||||||||||||||||||||||||    
T  39976463 gtgtgctccttctcaaggtctcaagttcgat 39976433  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 19154675 - 19154724
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||| || ||||||||| |||||||||||| ||||| |||||||    
T  19154675 gtgtgctcctcctaaaggtctcaggttcgattctctttgatgtcaatttg 19154724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 39041998 - 39041965
Alignment:
Q  252 aggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||||||||||||||||| |||||||||    
T  39041998 aggtctcaagttcgattctctctggtgccaattt 39041965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 51903932 - 51903839
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||| ||||  ||||||  |||||||||| |||  ||||||| ||||||||||||| | || ||||||||  ||| ||||||| |||||||    
T  51903932 ggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttcttc 51903839  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 4252556 - 4252509
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||||||||||| ||||| ||||| |||||||||    
T  4252556 gtgtgctcct-ctcaaggtctcaagtttgattccctctggtgccaattt 4252509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 7902742 - 7902678
Alignment:
Q  243 tccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||||||||||||| ||| ||||||||| | || ||||||||| | || |||||| ||||||    
T  7902742 tccttctcaaggtctcatgtttgattctctcaggtgtcaatttgaatgagtaaatttagcttctt 7902678  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 8051214 - 8051306
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| |||||||| | ||||||| ||||  | ||||  || |||| || ||| |||||||||||||||||| ||| | |||||||||    
T  8051214 aacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaattt 8051306  T

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Target: scaffold0070 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 42596 - 42482
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||| ||| |||||||||| |||||||||||| |||||||  || ||||||| ||||  |||||| |||||||||||| || ||||||||| ||||||    
T  42596 aacccagttgggttggcctagtggtattgacttggaatctgggagtatgctcctcctcagagtctcaggttcgattctctttggtgccaattt-aagggg 42498  T
Q  293 ttaatttaacttcttc 308  Q
    |||||||| |||||||    
T  42497 ttaatttagcttcttc 42482  T

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Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 81605 - 81526
Alignment:
Q  228 aatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||||| || |||| |||||||||||    
T  81605 aatctggaagtgtgctcctcctcaaggtctcagattcgattctccctgatgccaatttgagggagttagtttaacttctt 81526  T

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Target: scaffold0063 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 35467 - 35351
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagg 290  Q
    |||||||||||  ||| ||| || ||||||| |||| ||||| |  || ||||||| |||||||||| |||||||||| |||||||||||||||||| ||    
T  35467 ttaacccacttcggtttgcccagtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctctgatgccaatttgaggg 35368  T
Q  291 ggttaatttaacttctt 307  Q
    ||||  |||| ||||||    
T  35367 ggttggtttagcttctt 35351  T

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Target: scaffold0238 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 2740 - 2673
Alignment:
Q  240 tgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttctt 307  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||||| || ||||||| ||||||    
T  2740 tgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaagaggctaatttagcttctt 2673  T

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Target: scaffold0118 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 41711 - 41616
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||||||||||| |||||||||| ||||||| ||||| |||||   || ||||||| ||| |||||||| |||| ||||||||||||| |||||||    
T  41711 ttaacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttg 41616  T

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Target: scaffold0187 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 12500 - 12383
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc-tgatgccaatttgaag 289  Q
    |||||||| ||| |||||||| | ||||||||||||||| ||| | ||||| |||| ||||| || ||||||||||||||| | ||||||||||||  |     
T  12500 ttaacccatttgggttggcctggtggtattgacttgaaacctgaaagtgtgatcctcctcaaagtttcaagttcgattctcccttgatgccaatttagat 12401  T
Q  290 gggttaatttaacttctt 307  Q
    ||| || |||||||||||    
T  12400 gggctagtttaacttctt 12383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 22828 - 22711
Alignment:
Q  191 ttaacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctc-tgatgccaatttgaag 289  Q
    |||||||| ||| |||||||| | ||||||||||||||| ||| | ||||| |||| ||||| || ||||||||||||||| | ||||||||||||  |     
T  22828 ttaacccatttgggttggcctggtggtattgacttgaaacctgaaagtgtgatcctcctcaaagtttcaagttcgattctcccttgatgccaatttagat 22729  T
Q  290 gggttaatttaacttctt 307  Q
    ||| || |||||||||||    
T  22728 gggctagtttaacttctt 22711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 95044 - 94955
Alignment:
Q  196 ccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    ||||||| |||||||||| ||||||| |||| || ||||  |||||||||| |||||||||||| |||| ||| |||||| |||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattt 94955  T

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Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 13100 - 13029
Alignment:
Q  215 ggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    ||||||| ||||| ||||||  |||||||||| |||||||||||| ||||||||||||| |||| |||||||    
T  13100 ggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttg 13029  T

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Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 15399 - 15307
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaattt 285  Q
    |||||||||| ||||| || | ||||||| ||||  | ||||  |||||||||| ||| |||||||| ||||||||||||| |||||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 15307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 20027 - 19932
Alignment:
Q  204 gttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaattta 300  Q
    |||||||||| ||||||| |||| || ||||  || ||||||| |||||||||||| ||||||||||||||| ||  |||||| |||||||| ||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaatttg-aggggttagttta 19932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 24053 - 24168
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaagggg 292  Q
    |||||||||| |||||||||  ||||||||||||  |  | |  ||||||||||  || | || ||| |||||||| ||||||||||||||||||  |||    
T  24053 aacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtggg 24152  T
Q  293 ttaatttaacttcttc 308  Q
     |||||||||||||||    
T  24153 ctaatttaacttcttc 24168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 25379 - 25328
Alignment:
Q  237 gtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaa 288  Q
    ||||||||||||||||||||||| |||||||| |||||| || |||||||||    
T  25379 gtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttgaa 25328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 7802 - 7709
Alignment:
Q  193 aacccacttgcgttggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttg 286  Q
    |||| ||||| ||||| || | ||||||| ||||| | ||| | |||||||||| || |||||||||||||||||||| || | ||||||||||    
T  7802 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttg 7709  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 18344 - 18413
Alignment:
Q  238 tgtgctccttctcaaggtctcaagttcgattctctctgatgccaatttgaaggggttaatttaacttcttc 308  Q
    ||||||||| |||||||| ||| ||| ||||||||||| |||||||||| || || ||||||| |||||||    
T  18344 tgtgctcctcctcaaggtttcaggtttgattctctctggtgccaatttg-agtggctaatttagcttcttc 18413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 11541 - 11610
Alignment:
Q  206 tggcctaggggtattgacttgaaatctggatgtgtgctccttctcaaggtctcaagttcgattctctctg 275  Q
    |||||| | ||||||| ||||  ||||||  |||||||||| ||| |||||||| |||||||||||||||    
T  11541 tggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

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