View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16345_low_12 (Length: 238)
Name: NF16345_low_12
Description: NF16345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16345_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 42450252 - 42450028
Alignment:
| Q |
1 |
acagaaccaggactttttctcacactctcattcccaaaactgtttcttcttgcagaaaatggagaccctttcaaattcttaggagaagaatttgtggtag |
100 |
Q |
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| T |
42450252 |
acagaaccaggactttttctcacactctcattcccaaaactgtttcttcttgcagaaaatggagaccctttcaaattcttaggagaagaatttgtggtag |
42450153 |
T |
|
| Q |
101 |
atttcaaaattcccttaggactataatccaaacgtctaacaccacctcttaccatattagtaacttgaaccttattctctttccccaatggcttcttaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42450152 |
atttcaaaattcccttaggactataatccaaacgtctaacaccacctcttaccatattagtaacttgaaccttattctctttccccaatggcttcttaag |
42450053 |
T |
|
| Q |
201 |
tgtagattttggagacccatattga |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
42450052 |
tgtagattttggagacccatattga |
42450028 |
T |
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