View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16347_high_9 (Length: 290)
Name: NF16347_high_9
Description: NF16347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16347_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 285
Target Start/End: Complemental strand, 26825314 - 26825047
Alignment:
| Q |
18 |
cagacaagataggtgagccgctatagccgaaggaagaggaaagcaacttctgaggaggtaaaagatatacctcagaagccaccaaaggtggtcaaaacta |
117 |
Q |
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| T |
26825314 |
cagacaagataggtgagccgctatagccgaaggaagaggaaagcaacttctgaggaggtaaaagatatacctcagaagccaccaaagaaggtcaaaacta |
26825215 |
T |
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| Q |
118 |
tcaaaattgttgcttctggtgtacataaggaagtagcagaactggacacttcataaattcttcccactagaactagaggtggtgctactataagagcctc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26825214 |
tcaaaattgttgcttctggtgtacataaggaagtagcagaactggacacttcataaattcttcccaccagaactagaggtggtgctactataagagcctc |
26825115 |
T |
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| Q |
218 |
acctgcacagttagagaagaaaccagtcaagcaagcaagaaggccagctaggaagttgatgatgtcca |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
26825114 |
acctgcacagttagagaagaaaccagtcaagcaagcaagaaggccagctaggaagttggtgatgtcca |
26825047 |
T |
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