View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1634_high_1 (Length: 762)

Name: NF1634_high_1
Description: NF1634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1634_high_1
NF1634_high_1
[»] chr2 (65 HSPs)
chr2 (568-743)||(18487060-18487235)
chr2 (137-235)||(18488080-18488178)
chr2 (627-731)||(18513441-18513542)
chr2 (627-731)||(18507000-18507101)
chr2 (9-45)||(2438223-2438259)
chr2 (9-45)||(34113789-34113825)
chr2 (10-45)||(2438489-2438524)
chr2 (9-44)||(7491843-7491878)
chr2 (9-44)||(8716895-8716930)
chr2 (9-48)||(11201678-11201717)
chr2 (10-45)||(22897655-22897690)
chr2 (9-44)||(27560205-27560240)
chr2 (9-43)||(17408297-17408331)
chr2 (9-43)||(20252210-20252244)
chr2 (9-43)||(34062668-34062702)
chr2 (9-43)||(34883851-34883885)
chr2 (9-43)||(36131031-36131065)
chr2 (9-43)||(40607702-40607736)
chr2 (9-43)||(41450516-41450550)
chr2 (10-44)||(45474350-45474384)
chr2 (10-43)||(7492108-7492141)
chr2 (10-43)||(16108215-16108248)
chr2 (11-48)||(22182929-22182966)
chr2 (9-46)||(24345681-24345718)
chr2 (10-47)||(29239329-29239366)
chr2 (10-43)||(39833739-39833772)
chr2 (9-45)||(18374707-18374743)
chr2 (9-45)||(23788967-23789003)
chr2 (9-41)||(42629373-42629405)
chr2 (9-44)||(8912877-8912912)
chr2 (9-48)||(12890211-12890250)
chr2 (10-45)||(17408032-17408067)
chr2 (269-316)||(18487506-18487553)
chr2 (9-48)||(22897386-22897425)
chr2 (9-43)||(2060316-2060350)
chr2 (9-43)||(2200243-2200277)
chr2 (9-43)||(3095299-3095333)
chr2 (9-43)||(4711728-4711762)
chr2 (9-43)||(5664638-5664672)
chr2 (9-43)||(7116302-7116336)
chr2 (9-43)||(8841660-8841694)
chr2 (9-43)||(15227890-15227924)
chr2 (9-43)||(15228152-15228186)
chr2 (9-43)||(16805794-16805828)
chr2 (9-43)||(16845075-16845109)
chr2 (9-43)||(25624733-25624767)
chr2 (9-43)||(26322296-26322330)
chr2 (9-43)||(28566151-28566185)
chr2 (9-43)||(32120944-32120978)
chr2 (9-43)||(34113531-34113565)
chr2 (9-43)||(40680727-40680761)
chr2 (9-43)||(41422512-41422546)
chr2 (9-43)||(41494625-41494659)
chr2 (12-45)||(1359789-1359822)
chr2 (10-43)||(1360055-1360088)
chr2 (9-46)||(10399465-10399502)
chr2 (10-43)||(10757774-10757807)
chr2 (16-45)||(10757988-10758017)
chr2 (10-43)||(11201947-11201980)
chr2 (11-48)||(12872981-12873018)
chr2 (9-50)||(13598515-13598556)
chr2 (11-40)||(16456615-16456644)
chr2 (10-47)||(16805527-16805564)
chr2 (10-47)||(16844809-16844846)
chr2 (10-43)||(31751069-31751102)
[»] chr5 (41 HSPs)
chr5 (627-694)||(37046363-37046430)
chr5 (9-45)||(1265947-1265983)
chr5 (9-45)||(10734526-10734562)
chr5 (9-44)||(7951561-7951596)
chr5 (9-48)||(9020689-9020728)
chr5 (9-43)||(6673231-6673265)
chr5 (9-43)||(9828393-9828427)
chr5 (9-43)||(14913648-14913682)
chr5 (9-43)||(16127259-16127293)
chr5 (9-51)||(19571942-19571984)
chr5 (9-43)||(22527692-22527726)
chr5 (9-43)||(26894876-26894910)
chr5 (9-43)||(34662204-34662238)
chr5 (9-43)||(40004412-40004446)
chr5 (10-43)||(186362-186395)
chr5 (10-43)||(9828657-9828690)
chr5 (11-43)||(16440931-16440963)
chr5 (9-45)||(23286477-23286513)
chr5 (9-45)||(43060414-43060450)
chr5 (9-43)||(3028013-3028047)
chr5 (9-43)||(3497803-3497837)
chr5 (9-43)||(4976293-4976327)
chr5 (9-43)||(7940452-7940486)
chr5 (9-43)||(8949812-8949846)
chr5 (9-43)||(13862998-13863032)
chr5 (9-43)||(14435830-14435864)
chr5 (9-43)||(15190818-15190852)
chr5 (9-43)||(15521945-15521979)
chr5 (9-43)||(16153258-16153292)
chr5 (9-43)||(23260141-23260175)
chr5 (9-43)||(25601063-25601097)
chr5 (9-43)||(26889593-26889627)
chr5 (9-43)||(32147294-32147328)
chr5 (9-43)||(41384175-41384209)
chr5 (10-43)||(3497540-3497573)
chr5 (11-40)||(4753223-4753252)
chr5 (9-50)||(14913911-14913952)
chr5 (10-43)||(16127523-16127556)
chr5 (10-43)||(20142263-20142296)
chr5 (10-43)||(32147555-32147588)
chr5 (10-43)||(41383912-41383945)
[»] chr3 (79 HSPs)
chr3 (9-51)||(14428602-14428644)
chr3 (9-46)||(10220930-10220967)
chr3 (9-46)||(21756483-21756520)
chr3 (9-45)||(46049989-46050025)
chr3 (9-44)||(4024051-4024086)
chr3 (10-45)||(9779977-9780012)
chr3 (9-44)||(26593768-26593803)
chr3 (9-43)||(7181350-7181384)
chr3 (9-43)||(9499500-9499534)
chr3 (9-43)||(12050395-12050429)
chr3 (9-43)||(22103932-22103966)
chr3 (9-43)||(25149125-25149159)
chr3 (9-43)||(35868086-35868120)
chr3 (9-43)||(37728713-37728747)
chr3 (9-43)||(43868103-43868137)
chr3 (9-43)||(44543782-44543816)
chr3 (9-43)||(45252773-45252807)
chr3 (9-43)||(51284065-51284099)
chr3 (10-44)||(52058984-52059018)
chr3 (10-43)||(4024315-4024348)
chr3 (10-43)||(14428873-14428906)
chr3 (10-43)||(16434977-16435010)
chr3 (10-43)||(20862461-20862494)
chr3 (10-43)||(26806115-26806148)
chr3 (10-43)||(31531415-31531448)
chr3 (10-43)||(33868712-33868745)
chr3 (10-43)||(36005768-36005801)
chr3 (10-43)||(50647684-50647717)
chr3 (11-47)||(9795240-9795276)
chr3 (9-45)||(36098964-36099000)
chr3 (9-44)||(9780244-9780279)
chr3 (10-49)||(12675156-12675195)
chr3 (9-48)||(24087338-24087377)
chr3 (9-48)||(35165965-35166004)
chr3 (8-43)||(54604590-54604625)
chr3 (9-43)||(4759088-4759122)
chr3 (9-43)||(4759354-4759388)
chr3 (9-43)||(7051723-7051757)
chr3 (9-43)||(8321925-8321959)
chr3 (9-43)||(10015792-10015826)
chr3 (9-43)||(10044842-10044876)
chr3 (9-43)||(12683185-12683219)
chr3 (8-38)||(14758843-14758873)
chr3 (9-43)||(15996776-15996810)
chr3 (9-43)||(19897839-19897873)
chr3 (9-43)||(20862196-20862230)
chr3 (9-43)||(22832610-22832644)
chr3 (9-43)||(23700788-23700822)
chr3 (9-43)||(23719243-23719277)
chr3 (9-43)||(23737699-23737733)
chr3 (9-43)||(26058546-26058580)
chr3 (9-43)||(26221288-26221322)
chr3 (9-43)||(26306610-26306644)
chr3 (9-43)||(28875254-28875288)
chr3 (9-43)||(32963108-32963142)
chr3 (9-43)||(32978481-32978515)
chr3 (9-43)||(32978743-32978777)
chr3 (9-43)||(33868448-33868482)
chr3 (9-43)||(41392883-41392917)
chr3 (9-43)||(42801521-42801555)
chr3 (9-43)||(43701178-43701212)
chr3 (9-47)||(44542476-44542514)
chr3 (9-43)||(45513640-45513674)
chr3 (9-43)||(46845495-46845529)
chr3 (9-43)||(46878442-46878476)
chr3 (9-43)||(47066934-47066968)
chr3 (9-43)||(50647947-50647981)
chr3 (9-43)||(50726786-50726820)
chr3 (9-43)||(50786028-50786062)
chr3 (9-43)||(53361594-53361628)
chr3 (9-43)||(53361858-53361892)
chr3 (9-43)||(54782920-54782954)
chr3 (9-46)||(16435239-16435276)
chr3 (10-43)||(17591285-17591318)
chr3 (9-38)||(20918224-20918253)
chr3 (9-38)||(20927186-20927215)
chr3 (10-43)||(36099228-36099261)
chr3 (9-38)||(46703032-46703061)
chr3 (10-43)||(51283802-51283835)
[»] chr4 (67 HSPs)
chr4 (9-49)||(35675923-35675963)
chr4 (9-50)||(49373696-49373737)
chr4 (9-45)||(30771526-30771562)
chr4 (9-45)||(47806858-47806894)
chr4 (9-45)||(52977980-52978016)
chr4 (10-45)||(4549627-4549662)
chr4 (9-44)||(5743662-5743697)
chr4 (9-44)||(34273222-34273257)
chr4 (9-43)||(4035825-4035859)
chr4 (9-43)||(5375560-5375594)
chr4 (9-43)||(9328243-9328277)
chr4 (9-43)||(20391440-20391474)
chr4 (10-48)||(20747434-20747472)
chr4 (9-43)||(26626005-26626039)
chr4 (10-44)||(29014063-29014097)
chr4 (9-43)||(32032996-32033030)
chr4 (9-43)||(33413518-33413552)
chr4 (9-47)||(43387996-43388034)
chr4 (9-43)||(44294789-44294823)
chr4 (9-43)||(45742809-45742843)
chr4 (11-45)||(53277190-53277224)
chr4 (10-43)||(4036089-4036122)
chr4 (9-46)||(7698472-7698509)
chr4 (10-43)||(55631999-55632032)
chr4 (9-45)||(25708681-25708717)
chr4 (9-45)||(53564359-53564395)
chr4 (9-45)||(55563130-55563166)
chr4 (9-44)||(15241479-15241514)
chr4 (12-43)||(25708420-25708451)
chr4 (8-47)||(37842171-37842210)
chr4 (9-44)||(47228731-47228766)
chr4 (9-48)||(54878018-54878057)
chr4 (9-43)||(1028518-1028552)
chr4 (9-43)||(1859144-1859178)
chr4 (9-43)||(2615948-2615982)
chr4 (9-43)||(4415965-4415999)
chr4 (9-43)||(6753525-6753559)
chr4 (9-43)||(6807429-6807463)
chr4 (9-43)||(17610023-17610057)
chr4 (9-43)||(18872717-18872751)
chr4 (9-43)||(20455184-20455218)
chr4 (9-43)||(24754078-24754112)
chr4 (9-43)||(25124249-25124283)
chr4 (9-43)||(26625743-26625777)
chr4 (9-43)||(28501389-28501423)
chr4 (9-43)||(29520167-29520201)
chr4 (9-43)||(31937076-31937110)
chr4 (9-43)||(32899221-32899255)
chr4 (9-43)||(36391854-36391888)
chr4 (9-43)||(39670989-39671023)
chr4 (9-43)||(45097168-45097202)
chr4 (9-43)||(46949992-46950026)
chr4 (9-43)||(48030313-48030347)
chr4 (9-43)||(49228721-49228755)
chr4 (9-51)||(49489872-49489914)
chr4 (9-43)||(49793091-49793125)
chr4 (9-43)||(52870644-52870678)
chr4 (9-43)||(53629792-53629826)
chr4 (9-43)||(56432518-56432552)
chr4 (10-43)||(2615683-2615716)
chr4 (10-43)||(5743399-5743432)
chr4 (9-46)||(29460441-29460478)
chr4 (9-46)||(37173830-37173867)
chr4 (9-46)||(37518001-37518038)
chr4 (9-46)||(37522217-37522254)
chr4 (9-38)||(41620519-41620548)
chr4 (9-46)||(55632262-55632299)
[»] chr7 (42 HSPs)
chr7 (9-48)||(26255091-26255130)
chr7 (9-52)||(39197709-39197752)
chr7 (9-46)||(40300227-40300264)
chr7 (10-45)||(38428411-38428446)
chr7 (9-43)||(19920563-19920597)
chr7 (9-43)||(21295151-21295185)
chr7 (9-43)||(29286040-29286074)
chr7 (9-43)||(32814433-32814467)
chr7 (9-43)||(32872378-32872412)
chr7 (9-43)||(33858869-33858903)
chr7 (9-43)||(36698134-36698168)
chr7 (9-43)||(38858298-38858332)
chr7 (9-43)||(39871616-39871650)
chr7 (9-43)||(41026099-41026133)
chr7 (9-43)||(41252364-41252398)
chr7 (9-43)||(48521029-48521063)
chr7 (10-43)||(20075111-20075144)
chr7 (10-43)||(28060981-28061014)
chr7 (9-45)||(31457995-31458031)
chr7 (9-45)||(44510346-44510382)
chr7 (8-43)||(1275735-1275770)
chr7 (9-48)||(32759551-32759590)
chr7 (9-44)||(41003157-41003192)
chr7 (9-43)||(2290019-2290053)
chr7 (9-43)||(7449270-7449304)
chr7 (9-43)||(18113169-18113203)
chr7 (9-43)||(25247693-25247727)
chr7 (9-43)||(27813496-27813530)
chr7 (9-43)||(29177255-29177289)
chr7 (9-43)||(31581677-31581711)
chr7 (9-43)||(32118166-32118200)
chr7 (9-43)||(33381576-33381610)
chr7 (9-43)||(34012520-34012554)
chr7 (9-43)||(34979080-34979114)
chr7 (9-43)||(36646640-36646674)
chr7 (9-43)||(36711301-36711335)
chr7 (9-43)||(44547426-44547460)
chr7 (9-43)||(45907245-45907279)
chr7 (9-50)||(9140536-9140577)
chr7 (10-43)||(29176992-29177025)
chr7 (9-38)||(31769335-31769364)
chr7 (9-46)||(32643760-32643797)
[»] chr8 (62 HSPs)
chr8 (9-46)||(2944275-2944312)
chr8 (9-45)||(1774340-1774376)
chr8 (9-45)||(28192178-28192214)
chr8 (9-44)||(51098-51133)
chr8 (9-44)||(39029177-39029212)
chr8 (9-48)||(44251124-44251163)
chr8 (9-43)||(8251936-8251970)
chr8 (9-43)||(8951431-8951465)
chr8 (9-43)||(13153928-13153962)
chr8 (9-43)||(17856779-17856813)
chr8 (9-43)||(18754144-18754178)
chr8 (9-43)||(26016569-26016603)
chr8 (9-43)||(28572046-28572080)
chr8 (9-43)||(28579639-28579673)
chr8 (9-43)||(32675760-32675794)
chr8 (9-43)||(34568490-34568524)
chr8 (9-43)||(42885054-42885088)
chr8 (9-46)||(9035542-9035579)
chr8 (10-43)||(11798869-11798902)
chr8 (10-43)||(13154192-13154225)
chr8 (10-43)||(29279460-29279493)
chr8 (9-46)||(36177106-36177143)
chr8 (10-43)||(40530410-40530443)
chr8 (10-43)||(43653943-43653976)
chr8 (10-43)||(44250859-44250892)
chr8 (9-45)||(8948354-8948390)
chr8 (9-45)||(16998994-16999030)
chr8 (9-49)||(17336413-17336453)
chr8 (11-43)||(18455720-18455752)
chr8 (9-45)||(44502618-44502654)
chr8 (9-44)||(6050558-6050593)
chr8 (9-44)||(18641383-18641418)
chr8 (9-48)||(44888675-44888714)
chr8 (10-45)||(45283796-45283831)
chr8 (9-43)||(2152243-2152277)
chr8 (9-43)||(5162304-5162338)
chr8 (9-43)||(5593421-5593455)
chr8 (9-43)||(7758912-7758946)
chr8 (10-48)||(8251667-8251705)
chr8 (9-43)||(11798605-11798639)
chr8 (9-43)||(12802611-12802645)
chr8 (9-43)||(17069847-17069881)
chr8 (9-43)||(17578392-17578426)
chr8 (9-43)||(23487064-23487098)
chr8 (9-43)||(23688168-23688202)
chr8 (9-43)||(26016831-26016865)
chr8 (9-43)||(28965730-28965764)
chr8 (9-43)||(29598224-29598258)
chr8 (9-43)||(38878721-38878755)
chr8 (9-43)||(39029439-39029473)
chr8 (9-43)||(40529307-40529341)
chr8 (9-43)||(40741265-40741299)
chr8 (9-43)||(43654206-43654240)
chr8 (12-45)||(12255094-12255127)
chr8 (12-45)||(12260637-12260670)
chr8 (10-43)||(17856517-17856550)
chr8 (10-43)||(18111979-18112012)
chr8 (9-46)||(19176133-19176170)
chr8 (10-43)||(28864247-28864280)
chr8 (10-43)||(32475231-32475264)
chr8 (10-43)||(40741528-40741561)
chr8 (9-38)||(40785154-40785183)
[»] chr6 (40 HSPs)
chr6 (9-45)||(11847835-11847871)
chr6 (9-44)||(231108-231143)
chr6 (9-44)||(34301835-34301870)
chr6 (9-43)||(4844400-4844434)
chr6 (9-43)||(8743188-8743222)
chr6 (9-43)||(9038642-9038676)
chr6 (9-43)||(23398142-23398176)
chr6 (9-43)||(30248647-30248681)
chr6 (9-46)||(925936-925973)
chr6 (10-43)||(9388529-9388562)
chr6 (10-43)||(34741730-34741763)
chr6 (11-47)||(1147272-1147308)
chr6 (11-43)||(12144043-12144075)
chr6 (9-44)||(2090657-2090692)
chr6 (9-48)||(16272971-16273010)
chr6 (9-43)||(287417-287451)
chr6 (9-43)||(402624-402658)
chr6 (9-43)||(1730104-1730138)
chr6 (9-43)||(5457412-5457446)
chr6 (10-44)||(6418135-6418169)
chr6 (9-43)||(9388794-9388828)
chr6 (9-43)||(10195996-10196030)
chr6 (9-43)||(13321329-13321363)
chr6 (9-43)||(13647868-13647902)
chr6 (9-43)||(13648132-13648166)
chr6 (9-43)||(13901641-13901675)
chr6 (9-43)||(15498629-15498663)
chr6 (9-43)||(16122517-16122551)
chr6 (9-43)||(19097804-19097838)
chr6 (9-43)||(23604460-23604494)
chr6 (9-43)||(25045646-25045680)
chr6 (9-43)||(25197152-25197186)
chr6 (9-43)||(31091445-31091479)
chr6 (9-43)||(33487833-33487867)
chr6 (9-43)||(34915546-34915580)
chr6 (10-43)||(1779784-1779817)
chr6 (10-43)||(13866593-13866626)
chr6 (9-38)||(17227530-17227559)
chr6 (9-50)||(23282808-23282849)
chr6 (10-43)||(23397879-23397912)
[»] chr1 (69 HSPs)
chr1 (9-45)||(943640-943676)
chr1 (9-45)||(15811235-15811271)
chr1 (9-45)||(30290263-30290299)
chr1 (9-45)||(39363197-39363233)
chr1 (10-46)||(44646535-44646571)
chr1 (9-45)||(44649627-44649663)
chr1 (10-46)||(44649893-44649929)
chr1 (9-45)||(49907019-49907055)
chr1 (10-45)||(39497697-39497732)
chr1 (9-43)||(1039384-1039418)
chr1 (9-43)||(1046290-1046324)
chr1 (9-43)||(4102717-4102751)
chr1 (9-43)||(11741397-11741431)
chr1 (9-43)||(23541979-23542013)
chr1 (9-43)||(36694854-36694888)
chr1 (9-43)||(36710955-36710989)
chr1 (10-48)||(37951684-37951722)
chr1 (9-43)||(37951952-37951986)
chr1 (9-43)||(38920239-38920273)
chr1 (9-43)||(39497433-39497467)
chr1 (9-43)||(45039412-45039446)
chr1 (9-43)||(46075870-46075904)
chr1 (9-43)||(52431177-52431211)
chr1 (10-43)||(1047992-1048025)
chr1 (10-43)||(9202245-9202278)
chr1 (9-46)||(14171539-14171576)
chr1 (10-43)||(23542243-23542276)
chr1 (9-42)||(30289865-30289898)
chr1 (10-43)||(39362934-39362967)
chr1 (10-43)||(39750121-39750154)
chr1 (9-45)||(21631110-21631146)
chr1 (9-45)||(36695118-36695154)
chr1 (9-45)||(36711219-36711255)
chr1 (9-45)||(42872337-42872373)
chr1 (9-45)||(44646269-44646305)
chr1 (11-43)||(52601991-52602023)
chr1 (9-40)||(13343776-13343807)
chr1 (13-44)||(16456635-16456666)
chr1 (8-43)||(16576094-16576129)
chr1 (8-43)||(25227304-25227339)
chr1 (9-44)||(27037533-27037568)
chr1 (9-44)||(38613739-38613774)
chr1 (10-45)||(45039676-45039711)
chr1 (9-44)||(45335884-45335919)
chr1 (9-43)||(4280129-4280163)
chr1 (9-47)||(5765726-5765764)
chr1 (9-43)||(7763752-7763786)
chr1 (9-43)||(7783991-7784025)
chr1 (9-43)||(8104291-8104325)
chr1 (9-43)||(9413328-9413362)
chr1 (9-43)||(14171793-14171827)
chr1 (9-43)||(17483733-17483767)
chr1 (9-43)||(25509209-25509243)
chr1 (9-43)||(27037269-27037303)
chr1 (9-43)||(28885842-28885876)
chr1 (9-43)||(39750384-39750418)
chr1 (9-43)||(41317593-41317627)
chr1 (9-43)||(41855476-41855510)
chr1 (9-43)||(42276164-42276198)
chr1 (9-43)||(43456624-43456658)
chr1 (10-43)||(5765994-5766027)
chr1 (10-43)||(7784258-7784291)
chr1 (9-50)||(12814790-12814831)
chr1 (10-43)||(15810972-15811005)
chr1 (10-43)||(30289602-30289635)
chr1 (10-43)||(35984402-35984435)
chr1 (9-46)||(38261337-38261374)
chr1 (10-43)||(47069052-47069085)
chr1 (9-46)||(48067898-48067935)
[»] scaffold0604 (2 HSPs)
scaffold0604 (9-43)||(3785-3819)
scaffold0604 (9-46)||(3522-3559)
[»] scaffold0122 (2 HSPs)
scaffold0122 (9-43)||(12065-12099)
scaffold0122 (10-43)||(12328-12361)
[»] scaffold0029 (1 HSPs)
scaffold0029 (9-43)||(51685-51719)
[»] scaffold0025 (2 HSPs)
scaffold0025 (10-44)||(65377-65411)
scaffold0025 (9-43)||(65640-65674)
[»] scaffold0012 (2 HSPs)
scaffold0012 (9-43)||(47640-47674)
scaffold0012 (10-43)||(47904-47937)
[»] scaffold0008 (1 HSPs)
scaffold0008 (9-43)||(259125-259159)
[»] scaffold0002 (1 HSPs)
scaffold0002 (9-43)||(355334-355368)
[»] scaffold0674 (1 HSPs)
scaffold0674 (9-45)||(5149-5185)
[»] scaffold0549 (1 HSPs)
scaffold0549 (9-45)||(10185-10221)
[»] scaffold0368 (1 HSPs)
scaffold0368 (9-45)||(8216-8252)
[»] scaffold0240 (2 HSPs)
scaffold0240 (9-45)||(18495-18531)
scaffold0240 (9-43)||(18759-18793)
[»] scaffold0161 (1 HSPs)
scaffold0161 (9-45)||(3436-3472)
[»] scaffold0339 (1 HSPs)
scaffold0339 (9-44)||(7143-7178)
[»] scaffold0308 (1 HSPs)
scaffold0308 (9-48)||(14351-14390)
[»] scaffold0107 (1 HSPs)
scaffold0107 (9-44)||(48653-48688)
[»] scaffold0163 (1 HSPs)
scaffold0163 (9-43)||(1449-1483)
[»] scaffold0020 (1 HSPs)
scaffold0020 (9-43)||(164214-164248)
[»] scaffold0237 (1 HSPs)
scaffold0237 (10-43)||(6613-6646)


Alignment Details
Target: chr2 (Bit Score: 168; Significance: 1e-89; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 568 - 743
Target Start/End: Complemental strand, 18487235 - 18487060
Alignment:
Q  568 atgtgcaaataaattgtctcaaagcatgaaagaattgaacagaacaaagcaatgtagagatgaattatttgtttaggactcacattaattgagaaccatt 667  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18487235 atgtgcaaataaattgtctcaaagcatgtaagaattgaacagaacaaagcaatgtagagatgaattatttgtttaggactcacattaattgagaaccatt 18487136  T
Q  668 tacttgtgaaaggataacactgaaaccttcttcttctgtaaccttgagcaaaccctgcaaaataatttatattgga 743  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18487135 tacttgtgaaaggataacactgaaaccttcttcttctgtaaccttgagcaaaccctgcaaaatattttatattgga 18487060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 18488178 - 18488080
Alignment:
Q  137 aaagcactgatcggtttttgtacgcatttcggaaaagatcaaatatcttgcatggtcagtgcctactctctggtcccacctgaagcaagactcttcaca 235  Q
    ||||||| |||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18488178 aaagcaccgatcggtttttgcatgcatttcggaaaagaccaaatatctttcatggtcagtgcctactctctggtcccaccttaagcaagactcttcaca 18488080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 627 - 731
Target Start/End: Complemental strand, 18513542 - 18513441
Alignment:
Q  627 atgaattatttgtttaggactcacattaattgagaaccatttacttgtgaaaggataacactgaaaccttcttcttctgtaaccttgagcaaaccctgca 726  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||   | ||||||||||||||||| ||||||||||    
T  18513542 atgaattatttgtttaaaactcacattaattgagaaccattcacttgtgaaaggataacactgaaac---catcttctgtaaccttgagtaaaccctgca 18513446  T
Q  727 aaata 731  Q
    |||||    
T  18513445 aaata 18513441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 627 - 731
Target Start/End: Complemental strand, 18507101 - 18507000
Alignment:
Q  627 atgaattatttgtttaggactcacattaattgagaaccatttacttgtgaaaggataacactgaaaccttcttcttctgtaaccttgagcaaaccctgca 726  Q
    ||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| || ||||||||||    
T  18507101 atgaattatttgtctaaaacttacattaattgagaaccatttacttgtgaaaggataacactgaaac---catcttctgtaacctttagtaaaccctgca 18507005  T
Q  727 aaata 731  Q
    |||||    
T  18507004 aaata 18507000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 2438259 - 2438223
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  2438259 tcaaaagggtcttataattagggacggagggagtaat 2438223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 34113789 - 34113825
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagtaat 34113825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 2438489 - 2438524
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagtaat 2438524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 7491878 - 7491843
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  7491878 tcaaaagggtcttataattagggacggagggagtaa 7491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 8716895 - 8716930
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  8716895 tcaaaagggtcttataattagggacggagggagtaa 8716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 11201717 - 11201678
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  11201717 tcaaaagggtcttataattagggacggagggagtatttaa 11201678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 22897655 - 22897690
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagtaat 22897690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 27560240 - 27560205
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  27560240 tcaaaagggtcttataattagggacggagggagtaa 27560205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 17408297 - 17408331
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  17408297 tcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 20252244 - 20252210
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  20252244 tcaaaagggtcttataattagggacggagggagta 20252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 34062668 - 34062702
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  34062668 tcaaaagggtcttataattagggacggagggagta 34062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 34883851 - 34883885
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  34883851 tcaaaagggtcttataattagggacggagggagta 34883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 36131031 - 36131065
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  36131031 tcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 40607736 - 40607702
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  40607736 tcaaaagggtcttataattagggacggagggagta 40607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 41450550 - 41450516
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  41450550 tcaaaagggtcttataattagggacggagggagta 41450516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 45474384 - 45474350
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagtaa 45474350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 7492108 - 7492141
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  7492108 caaaagggtcttataattagggacggagggagta 7492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 16108248 - 16108215
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  16108248 caaaagggtcttataattagggacggagggagta 16108215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 22182929 - 22182966
Alignment:
Q  11 aaaagggtcttataattagggacggagggagtaattaa 48  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22182929 aaaagggtcttataattagggacggagggagtatttaa 22182966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 24345681 - 24345718
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24345681 tcaaaagggtcttataattagggacggaggtagtaatt 24345718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 29239366 - 29239329
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||| |||||||||||||||||||||||||||||||    
T  29239366 caaaagagtcttataattagggacggagggagtaatta 29239329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 39833772 - 39833739
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  39833772 caaaagggtcttataattagggacggagggagta 39833739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 18374707 - 18374743
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  18374707 tcaaaagggtcttataattagggacggaggtagtaat 18374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 23789003 - 23788967
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23789003 tcaaaagggtcttataattaaggacggagggagtaat 23788967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggag 41  Q
    |||||||||||||||||||||||||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 8912877 - 8912912
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  8912877 tcaaaagggtcttataattagggacggaggtagtaa 8912912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 12890211 - 12890250
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  12890211 tcaaaagggtcttataattagggacggaggtagtatttaa 12890250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 17408067 - 17408032
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||| ||||||||    
T  17408067 caaaagggtcttataattagggacggatggagtaat 17408032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 316
Target Start/End: Complemental strand, 18487553 - 18487506
Alignment:
Q  269 tgaaacgtttgtcgacatgatttttatctttaaaagtgtgtatttttt 316  Q
    |||||||||||||| ||| ||||||||||| |||||||||||| ||||    
T  18487553 tgaaacgtttgtcggcatcatttttatcttcaaaagtgtgtatatttt 18487506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 22897425 - 22897386
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  22897425 tcaaaaggatcttataattagggacggagggagtatttaa 22897386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 2060350 - 2060316
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  2060350 tcaaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 2200243 - 2200277
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  2200243 tcaaaagggtcttataattagggacggaggtagta 2200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 3095333 - 3095299
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  3095333 tcaaaagggtcttataattagggacggaggtagta 3095299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 4711762 - 4711728
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||| |||||||||||||||||||||    
T  4711762 tcaaaagggtcttttaattagggacggagggagta 4711728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 5664672 - 5664638
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  5664672 tcaaaaaggtcttataattagggacggagggagta 5664638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 7116302 - 7116336
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  7116302 tcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 8841660 - 8841694
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||| ||||||||||||||    
T  8841660 tcaaaagggtcttataattaaggacggagggagta 8841694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 15227924 - 15227890
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  15227924 tcaaaagggtcctataattagggacggagggagta 15227890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 15228152 - 15228186
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  15228152 tcaaaaggatcttataattagggacggagggagta 15228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 16805794 - 16805828
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  16805794 tcaaaaggatcttataattagggacggagggagta 16805828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 16845075 - 16845109
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  16845075 tcaaaaggatcttataattagggacggagggagta 16845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 25624767 - 25624733
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  25624767 tcaaaaaggtcttataattagggacggagggagta 25624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 26322296 - 26322330
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  26322296 tcaaaagggtcttataattagggacggaggtagta 26322330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 28566185 - 28566151
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  28566185 tcaaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 32120978 - 32120944
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  32120978 tcaaaaggatcttataattagggacggagggagta 32120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 34113565 - 34113531
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  34113565 tcaaaagggtcttataattagggacggatggagta 34113531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 40680761 - 40680727
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  40680761 tcaaaagggtcttataattagggacggatggagta 40680727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 41422546 - 41422512
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  41422546 tcaaaagggtcttataattagggacggaggtagta 41422512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 41494625 - 41494659
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  41494625 tcaaaagggtcttataattagggacggaggtagta 41494659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 1359822 - 1359789
Alignment:
Q  12 aaagggtcttataattagggacggagggagtaat 45  Q
    ||||| ||||||||||||||||||||||||||||    
T  1359822 aaaggatcttataattagggacggagggagtaat 1359789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 1360055 - 1360088
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||| |||||||||||||||||||||||||||    
T  1360055 caaaagagtcttataattagggacggagggagta 1360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 10399465 - 10399502
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  10399465 tcaaaagggtcttataattagggatggaggtagtaatt 10399502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 10757807 - 10757774
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||| |||||||    
T  10757807 caaaagggtcttataattagggacggggggagta 10757774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 10757988 - 10758017
Alignment:
Q  16 ggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||||    
T  10757988 ggtcttataattagggacggagggagtaat 10758017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 11201947 - 11201980
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||| |||||||||    
T  11201947 caaaagggtcttataattagggacagagggagta 11201980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 12873018 - 12872981
Alignment:
Q  11 aaaagggtcttataattagggacggagggagtaattaa 48  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  12873018 aaaagggtcttataattagagacggaggtagtaattaa 12872981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 13598556 - 13598515
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaa 50  Q
    |||||||||||||||| ||||||||||||| |||| ||||||    
T  13598556 tcaaaagggtcttatatttagggacggaggtagtagttaaaa 13598515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 40
Target Start/End: Complemental strand, 16456644 - 16456615
Alignment:
Q  11 aaaagggtcttataattagggacggaggga 40  Q
    ||||||||||||||||||||||||||||||    
T  16456644 aaaagggtcttataattagggacggaggga 16456615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 16805564 - 16805527
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  16805564 caaaagagtcttataattagggacggaggaagtaatta 16805527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 16844846 - 16844809
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  16844846 caaaagagtcttataattagggacggaggaagtaatta 16844809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 31751102 - 31751069
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||| ||||    
T  31751102 caaaagggtcttataattagggacggaggtagta 31751069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 694
Target Start/End: Complemental strand, 37046430 - 37046363
Alignment:
Q  627 atgaattatttgtttaggactcacattaattgagaaccatttacttgtgaaaggataacactgaaacc 694  Q
    |||||||||||||||   |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37046430 atgaattatttgtttgaaactcacattaattgagaaacatttacttgggaaaggataacactgaaacc 37046363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 1265983 - 1265947
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  1265983 tcaaaagggtcttataattagggacggagggagtaat 1265947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 10734526 - 10734562
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagtaat 10734562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 7951596 - 7951561
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  7951596 tcaaaagggtcttataattagggacggagggagtaa 7951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 9020728 - 9020689
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  9020728 tcaaaagggtcttataattagggacggagggagtatttaa 9020689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 6673231 - 6673265
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  6673231 tcaaaagggtcttataattagggacggagggagta 6673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 9828427 - 9828393
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  9828427 tcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 14913682 - 14913648
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  14913682 tcaaaagggtcttataattagggacggagggagta 14913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 16127293 - 16127259
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  16127293 tcaaaagggtcttataattagggacggagggagta 16127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 19571942 - 19571984
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaat 51  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  19571942 tcaaaagggtcttataattagggacggaggtagtaataaaaat 19571984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 22527726 - 22527692
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  22527726 tcaaaagggtcttataattagggacggagggagta 22527692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 26894876 - 26894910
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  26894876 tcaaaagggtcttataattagggacggagggagta 26894910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 34662238 - 34662204
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  34662238 tcaaaagggtcttataattagggacggagggagta 34662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 40004412 - 40004446
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  40004412 tcaaaagggtcttataattagggacggagggagta 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 186362 - 186395
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagta 186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 16440963 - 16440931
Alignment:
Q  11 aaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||    
T  16440963 aaaagggtcttataattagggacggagggagta 16440931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 23286477 - 23286513
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  23286477 tcaaaagggtcttataattagggacggaggtagtaat 23286513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 43060414 - 43060450
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  43060414 tcaaaagggtcttataattagggacggaggtagtaat 43060450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 3028047 - 3028013
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  3028047 tcaaaagggtcttataattagggacggaggtagta 3028013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 3497803 - 3497837
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  3497803 tcaaaagggtcttataattaggaacggagggagta 3497837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 4976293 - 4976327
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  4976293 tcaaaagggtcttataattagggacggaggtagta 4976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 7940486 - 7940452
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  7940486 tcaaaagggtcttataattagggacggaggtagta 7940452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 8949846 - 8949812
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  8949846 tcaaaagggtcttataattagggacggaggtagta 8949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 13862998 - 13863032
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  13862998 tcaaaagggtcatataattagggacggagggagta 13863032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 14435864 - 14435830
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  14435864 tcaaaagggtcttataattagggacggaggtagta 14435830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 15190818 - 15190852
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||| |||||||||||||||||||||||||||    
T  15190818 tcaaaagagtcttataattagggacggagggagta 15190852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 15521945 - 15521979
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||| ||||||||||||||||||||||||    
T  15521945 tcaaaagggttttataattagggacggagggagta 15521979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 16153258 - 16153292
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  16153258 tcaaaagggtcttataattagggacggatggagta 16153292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 23260141 - 23260175
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  23260141 tcaaaagggtcttataattagggacggaggtagta 23260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 25601063 - 25601097
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  25601063 tcaaaagggtcttataattaggaacggagggagta 25601097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 26889627 - 26889593
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  26889627 tcaaaagggtcctataattagggacggagggagta 26889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 32147328 - 32147294
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  32147328 tcaaaaaggtcttataattagggacggagggagta 32147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 41384175 - 41384209
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  41384175 tcaaaaggatcttataattagggacggagggagta 41384209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 3497573 - 3497540
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||| ||||||    
T  3497573 caaaagggtcttataattagggacggatggagta 3497540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 40
Target Start/End: Original strand, 4753223 - 4753252
Alignment:
Q  11 aaaagggtcttataattagggacggaggga 40  Q
    ||||||||||||||||||||||||||||||    
T  4753223 aaaagggtcttataattagggacggaggga 4753252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 14913911 - 14913952
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaa 50  Q
    ||||||||| | ||||||||||||||||||||||||| ||||    
T  14913911 tcaaaagggccctataattagggacggagggagtaataaaaa 14913952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 16127523 - 16127556
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||| ||||||    
T  16127523 caaaagggtcttataattagggacggatggagta 16127556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 20142263 - 20142296
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||| ||||    
T  20142263 caaaagggtcttataattagggacggaggtagta 20142296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 32147555 - 32147588
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||| |||||||||||||    
T  32147555 caaaagggtcttataattagagacggagggagta 32147588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 41383945 - 41383912
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||| ||||||||||||||||||||||||||    
T  41383945 caaaaggatcttataattagggacggagggagta 41383912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 14428644 - 14428602
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaat 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14428644 tcaaaagggtcttataattagggacggagggagtaattaaaat 14428602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 10220967 - 10220930
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10220967 tcaaaagggtcttataattagggacggagggagtaatt 10220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 21756520 - 21756483
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21756520 tcaaaagggtcttataattagggacggagggagtaatt 21756483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 46049989 - 46050025
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  46049989 tcaaaagggtcttataattagggacggagggagtaat 46050025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 4024086 - 4024051
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  4024086 tcaaaagggtcttataattagggacggagggagtaa 4024051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 9780012 - 9779977
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagtaat 9779977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 26593768 - 26593803
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  26593768 tcaaaagggtcttataattagggacggagggagtaa 26593803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 7181384 - 7181350
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  7181384 tcaaaagggtcttataattagggacggagggagta 7181350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 9499500 - 9499534
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  9499500 tcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 12050395 - 12050429
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  12050395 tcaaaagggtcttataattagggacggagggagta 12050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 22103932 - 22103966
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  22103932 tcaaaagggtcttataattagggacggagggagta 22103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 25149125 - 25149159
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  25149125 tcaaaagggtcttataattagggacggagggagta 25149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 35868086 - 35868120
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  35868086 tcaaaagggtcttataattagggacggagggagta 35868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 37728747 - 37728713
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  37728747 tcaaaagggtcttataattagggacggagggagta 37728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 43868137 - 43868103
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  43868137 tcaaaagggtcttataattagggacggagggagta 43868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 44543816 - 44543782
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  44543816 tcaaaagggtcttataattagggacggagggagta 44543782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 45252807 - 45252773
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  45252807 tcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 51284065 - 51284099
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  51284065 tcaaaagggtcttataattagggacggagggagta 51284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 52059018 - 52058984
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagtaa 52058984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 4024315 - 4024348
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  4024315 caaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 14428873 - 14428906
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagta 14428906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 20862461 - 20862494
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagta 20862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 26806148 - 26806115
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  26806148 caaaagggtcttataattagggacggagggagta 26806115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 33868712 - 33868745
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagta 33868745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 36005768 - 36005801
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  36005768 caaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 50647717 - 50647684
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  50647717 caaaagggtcttataattagggacggagggagta 50647684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 9795240 - 9795276
Alignment:
Q  11 aaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||||||||||||| ||||||||||||||||||||    
T  9795240 aaaagggtcttataataagggacggagggagtaatta 9795276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 36099000 - 36098964
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||| ||||||||    
T  36099000 tcaaaagggtcttataattagggacggatggagtaat 36098964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 9780244 - 9780279
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||| ||||||    
T  9780244 tcaaaagggtcttataattagggacggagagagtaa 9780279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 12675195 - 12675156
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaattaaa 49  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  12675195 caaaagggtcttatatatagggacggagggagtaattaaa 12675156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 24087338 - 24087377
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  24087338 tcaaaagggtcttataattagggacggaggtagtatttaa 24087377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 35165965 - 35166004
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  35165965 tcaaaagggtcttataattaaggacgaagggagtaattaa 35166004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 54604590 - 54604625
Alignment:
Q  8 atcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| ||||||||||||||    
T  54604590 atcaaaagggtcttataattaaggacggagggagta 54604625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 4759122 - 4759088
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  4759122 tcaaaagggtcttataattagggacggaggtagta 4759088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 4759354 - 4759388
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  4759354 tcaaaagggtcttataattagggacggaggtagta 4759388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 7051723 - 7051757
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  7051723 tcaaaaggatcttataattagggacggagggagta 7051757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 8321959 - 8321925
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  8321959 tcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 10015792 - 10015826
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  10015792 tcaaaagggtcttataattagggacggaggtagta 10015826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 10044876 - 10044842
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  10044876 tcaaaaggatcttataattagggacggagggagta 10044842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 12683185 - 12683219
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  12683185 tcaaaatggtcttataattagggacggagggagta 12683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 14758873 - 14758843
Alignment:
Q  8 atcaaaagggtcttataattagggacggagg 38  Q
    |||||||||||||||||||||||||||||||    
T  14758873 atcaaaagggtcttataattagggacggagg 14758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 15996776 - 15996810
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  15996776 tcaaaagggtcttataattagggacggaggtagta 15996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 19897839 - 19897873
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  19897839 tcaaaagggtcttataattagggacggaggtagta 19897873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 20862230 - 20862196
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  20862230 tcaaaagggtcttataattagggacggatggagta 20862196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 22832610 - 22832644
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  22832610 tcaaaagggtcttataattagggacggaaggagta 22832644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 23700788 - 23700822
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  23700788 tcaaaaaggtcttataattagggacggagggagta 23700822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 23719243 - 23719277
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  23719243 tcaaaaaggtcttataattagggacggagggagta 23719277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 23737699 - 23737733
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  23737699 tcaaaaaggtcttataattagggacggagggagta 23737733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 26058580 - 26058546
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  26058580 tcaaaagggtcttataattagggacggaggaagta 26058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 26221322 - 26221288
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||| |||||||||||||||||||||||||||    
T  26221322 tcaaaagagtcttataattagggacggagggagta 26221288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 26306610 - 26306644
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  26306610 tcaaaagggtcttataattaggaacggagggagta 26306644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 28875254 - 28875288
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  28875254 tcaaaagggtcttataattagggacggaggtagta 28875288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 32963108 - 32963142
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  32963108 tcaaaaggatcttataattagggacggagggagta 32963142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 32978515 - 32978481
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  32978515 tcaaaaggatcttataattagggacggagggagta 32978481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 32978743 - 32978777
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  32978743 tcaaaagggtcctataattagggacggagggagta 32978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 33868482 - 33868448
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  33868482 tcaaaaggatcttataattagggacggagggagta 33868448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 41392883 - 41392917
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  41392883 tcaaaagggtcttataattagggacggaggtagta 41392917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 42801555 - 42801521
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  42801555 tcaaaagggtcttataattagggacggaggtagta 42801521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 43701212 - 43701178
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||| |||||||||    
T  43701212 tcaaaagggtcttataattagggacagagggagta 43701178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 44542476 - 44542514
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  44542476 tcaaaagggtcttataattagggacggaggtactaatta 44542514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 45513640 - 45513674
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  45513640 tcaaaagggtcttataattagggacggaggtagta 45513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 46845495 - 46845529
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  46845495 tcaaaagggtcttataattagggacggaggtagta 46845529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 46878442 - 46878476
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||| ||||||||||||||    
T  46878442 tcaaaagggtcttataattaaggacggagggagta 46878476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 47066968 - 47066934
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  47066968 tcaaaagggtcttataattagggacggaggaagta 47066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 50647947 - 50647981
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  50647947 tcaaaagggtcttataattagagacggagggagta 50647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 50726786 - 50726820
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||| ||||||||||||||||    
T  50726786 tcaaaagggtcttataatcagggacggagggagta 50726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 50786062 - 50786028
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||| ||||||||||||||||    
T  50786062 tcaaaagggtcttataatcagggacggagggagta 50786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 53361628 - 53361594
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  53361628 tcaaaagggtcttataattagggacggatggagta 53361594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 53361858 - 53361892
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  53361858 tcaaaatggtcttataattagggacggagggagta 53361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 54782920 - 54782954
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||| ||||||||    
T  54782920 tcaaaagggtcttataattagggacgaagggagta 54782954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 16435239 - 16435276
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16435239 tcaaaaggatcttataattagagacggagggagtaatt 16435276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 17591318 - 17591285
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||| ||||||||||    
T  17591318 caaaagggtcttataattagggatggagggagta 17591285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 20918253 - 20918224
Alignment:
Q  9 tcaaaagggtcttataattagggacggagg 38  Q
    ||||||||||||||||||||||||||||||    
T  20918253 tcaaaagggtcttataattagggacggagg 20918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 20927215 - 20927186
Alignment:
Q  9 tcaaaagggtcttataattagggacggagg 38  Q
    ||||||||||||||||||||||||||||||    
T  20927215 tcaaaagggtcttataattagggacggagg 20927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 36099228 - 36099261
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||| |||||||||    
T  36099228 caaaagggtcttataattagggacagagggagta 36099261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 46703061 - 46703032
Alignment:
Q  9 tcaaaagggtcttataattagggacggagg 38  Q
    ||||||||||||||||||||||||||||||    
T  46703061 tcaaaagggtcttataattagggacggagg 46703032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 51283835 - 51283802
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||| |||||||||    
T  51283835 caaaagggtcttataattagggacagagggagta 51283802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 35675923 - 35675963
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaa 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagtaattaaa 35675963  T

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Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 49373696 - 49373737
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaa 50  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  49373696 tcaaaagggtcttataattagggacggaggtagtaattaaaa 49373737  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 30771562 - 30771526
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  30771562 tcaaaagggtcttataattagggacggagggagtaat 30771526  T

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Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 47806894 - 47806858
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  47806894 tcaaaagggtcttataattagggacggagggagtaat 47806858  T

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Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 52978016 - 52977980
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  52978016 tcaaaagggtcttataattagggacggagggagtaat 52977980  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 4549662 - 4549627
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagtaat 4549627  T

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Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 5743662 - 5743697
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  5743662 tcaaaagggtcttataattagggacggagggagtaa 5743697  T

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Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 34273222 - 34273257
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  34273222 tcaaaagggtcttataattagggacggagggagtaa 34273257  T

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Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 4035859 - 4035825
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  4035859 tcaaaagggtcttataattagggacggagggagta 4035825  T

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Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 5375560 - 5375594
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  5375560 tcaaaagggtcttataattagggacggagggagta 5375594  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 9328243 - 9328277
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  9328243 tcaaaagggtcttataattagggacggagggagta 9328277  T

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Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 20391440 - 20391474
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  20391440 tcaaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 20747434 - 20747472
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  20747434 caaaagggtcttataattagggacggagggagtatttaa 20747472  T

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Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 26626005 - 26626039
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  26626005 tcaaaagggtcttataattagggacggagggagta 26626039  T

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Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 29014097 - 29014063
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagtaa 29014063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 32032996 - 32033030
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  32032996 tcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 33413552 - 33413518
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  33413552 tcaaaagggtcttataattagggacggagggagta 33413518  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 43387996 - 43388034
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  43387996 tcaaaagggtcttataattagggacggaggaagtaatta 43388034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 44294823 - 44294789
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  44294823 tcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 45742809 - 45742843
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  45742809 tcaaaagggtcttataattagggacggagggagta 45742843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 53277190 - 53277224
Alignment:
Q  11 aaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||    
T  53277190 aaaagggtcttataattagggacggagggagtaat 53277224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 7698472 - 7698509
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||||||||||| |||||||    
T  7698472 tcaaaagggtcttataattagggacggaggtagtaatt 7698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 25708681 - 25708717
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||| ||||||||||||||||||||||||||||||    
T  25708681 tcaaaaaggtcttataattagggacggagggagtaat 25708717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 53564359 - 53564395
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  53564359 tcaaaagggtcttataattagggacggaggtagtaat 53564395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 55563130 - 55563166
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  55563130 tcaaaagggtcttataattagggacggaggtagtaat 55563166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 15241514 - 15241479
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15241514 tcaaaagagtcttataattagggacggagggagtaa 15241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 43
Target Start/End: Complemental strand, 25708451 - 25708420
Alignment:
Q  12 aaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||    
T  25708451 aaagggtcttataattagggacggagggagta 25708420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 37842210 - 37842171
Alignment:
Q  8 atcaaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  37842210 atcaaaagagtcttataattagggacggagggaataatta 37842171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 47228731 - 47228766
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  47228731 tcaaaagggtcttataattagggacggaggaagtaa 47228766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 54878018 - 54878057
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  54878018 tcaaaacggtcttataattagggacggaggtagtaattaa 54878057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 1028552 - 1028518
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  1028552 tcaaaagggtcttataattaggaacggagggagta 1028518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 1859178 - 1859144
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  1859178 tcaaaaaggtcttataattagggacggagggagta 1859144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 2615948 - 2615982
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||| |||||||||||||||||||    
T  2615948 tcaaaagggtcttatgattagggacggagggagta 2615982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 4415999 - 4415965
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  4415999 tcaaaagggtcttataattagggacggaggtagta 4415965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 6753559 - 6753525
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  6753559 tcaaaaggatcttataattagggacggagggagta 6753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 6807463 - 6807429
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||| |||||||||    
T  6807463 tcaaaagggtcttataattagggacagagggagta 6807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 17610023 - 17610057
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  17610023 tcaaaaggatcttataattagggacggagggagta 17610057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 18872751 - 18872717
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  18872751 tcaaaagggtcttataattagggacggaggtagta 18872717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 20455184 - 20455218
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  20455184 tcaaaagggtcttataattagggacggaggtagta 20455218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 24754112 - 24754078
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  24754112 tcaaaaggatcttataattagggacggagggagta 24754078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 25124249 - 25124283
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  25124249 tcaaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 26625777 - 26625743
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  26625777 tcaaaagggtcctataattagggacggagggagta 26625743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 28501389 - 28501423
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  28501389 tcaaaagggtcttataattagggacggaggtagta 28501423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 29520167 - 29520201
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  29520167 tcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 31937110 - 31937076
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  31937110 tcaaaagggtcttataattagggacggaggtagta 31937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 32899221 - 32899255
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  32899221 tcaaaagggtcttataattagggacggaggtagta 32899255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 36391888 - 36391854
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||| ||||||||||||||    
T  36391888 tcaaaagggtcttataattaaggacggagggagta 36391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 39670989 - 39671023
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  39670989 tcaaaagggtcttataattagggacggaggtagta 39671023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 45097168 - 45097202
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  45097168 tcaaaagggtcttataattagggacggatggagta 45097202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 46950026 - 46949992
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  46950026 tcaaaagggtcttataattagggacggaggtagta 46949992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 48030347 - 48030313
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||| ||||||||||    
T  48030347 tcaaaagggtcttataattagggatggagggagta 48030313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 49228721 - 49228755
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  49228721 tcaaaagggtcttataattagagacggagggagta 49228755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 49489914 - 49489872
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaat 51  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||    
T  49489914 tcaaaagtgtcctataattagggacggaggtagtaattaaaat 49489872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 49793125 - 49793091
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  49793125 tcaaaagggtcttataattagggacggaggtagta 49793091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 52870678 - 52870644
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  52870678 tcaaaagggtcttataattagagacggagggagta 52870644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 53629826 - 53629792
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||| ||||||||||    
T  53629826 tcaaaagggtcttataattagggatggagggagta 53629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 56432552 - 56432518
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  56432552 tcaaaagggtcttataattagggacggaggtagta 56432518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 2615716 - 2615683
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||| |||||||||||||||||||||||||    
T  2615716 caaaagggccttataattagggacggagggagta 2615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 5743432 - 5743399
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||| ||||||||||||||||||||||||||||    
T  5743432 caaaatggtcttataattagggacggagggagta 5743399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 29460478 - 29460441
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  29460478 tcaaaagggccttataattagggacggaggtagtaatt 29460441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 37173867 - 37173830
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  37173867 tcaaaagggtcttataattagggacgaaggtagtaatt 37173830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 37518038 - 37518001
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  37518038 tcaaaagggtcttataattaggaacggaggtagtaatt 37518001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 37522254 - 37522217
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  37522254 tcaaaagggtcttataattaggaacggaggtagtaatt 37522217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 41620548 - 41620519
Alignment:
Q  9 tcaaaagggtcttataattagggacggagg 38  Q
    ||||||||||||||||||||||||||||||    
T  41620548 tcaaaagggtcttataattagggacggagg 41620519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 55632262 - 55632299
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  55632262 tcaaaaggatcttataattagagacggagggagtaatt 55632299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 26255130 - 26255091
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26255130 tcaaaagggtcttataattagggacggagggagtaattaa 26255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 39197752 - 39197709
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaatg 52  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  39197752 tcaaaagggtcttataattagggacggagggagtaataaaaatg 39197709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 40300264 - 40300227
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40300264 tcaaaagggtcttataattagggacggagggagtaatt 40300227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 38428411 - 38428446
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  38428411 caaaagggtcttataattagggacggagggagtaat 38428446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 19920597 - 19920563
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  19920597 tcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 21295185 - 21295151
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  21295185 tcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 29286040 - 29286074
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  29286040 tcaaaagggtcttataattagggacggagggagta 29286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 32814467 - 32814433
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  32814467 tcaaaagggtcttataattagggacggagggagta 32814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 32872378 - 32872412
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  32872378 tcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 33858869 - 33858903
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  33858869 tcaaaagggtcttataattagggacggagggagta 33858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 36698134 - 36698168
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  36698134 tcaaaagggtcttataattagggacggagggagta 36698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 38858332 - 38858298
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  38858332 tcaaaagggtcttataattagggacggagggagta 38858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 39871616 - 39871650
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  39871616 tcaaaagggtcttataattagggacggagggagta 39871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 41026099 - 41026133
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  41026099 tcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 41252364 - 41252398
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  41252364 tcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 48521063 - 48521029
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  48521063 tcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 20075111 - 20075144
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagta 20075144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 28060981 - 28061014
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagta 28061014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 31458031 - 31457995
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31458031 tcaaaagggtcttataattagggacggaggaagtaat 31457995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 44510346 - 44510382
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||| ||||||||||||||||||||||||||||||    
T  44510346 tcaaaatggtcttataattagggacggagggagtaat 44510382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 1275735 - 1275770
Alignment:
Q  8 atcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||| ||||||||||    
T  1275735 atcaaaagggtcttataattagggatggagggagta 1275770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 32759590 - 32759551
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  32759590 tcaaaaaggtcttataattagggacggaggtagtaattaa 32759551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 41003157 - 41003192
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||| |||||||||||||||    
T  41003157 tcaaaagggtcttataattaaggacggagggagtaa 41003192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 2290019 - 2290053
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  2290019 tcaaaagggtcttataattagggacggaggtagta 2290053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 7449304 - 7449270
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  7449304 tcaaaatggtcttataattagggacggagggagta 7449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 18113169 - 18113203
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  18113169 tcaaaagggtcttataattagagacggagggagta 18113203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 25247693 - 25247727
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||| |||||||||||||||||||||||||||    
T  25247693 tcaaaagagtcttataattagggacggagggagta 25247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 27813530 - 27813496
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  27813530 tcaaaagggtcttataattagggacggaggtagta 27813496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 29177255 - 29177289
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  29177255 tcaaaaggatcttataattagggacggagggagta 29177289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 31581711 - 31581677
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  31581711 tcaaaagggtcttataattagggacggaggtagta 31581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 32118166 - 32118200
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  32118166 tcaaaagggtcttataattagggacggaggtagta 32118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 33381576 - 33381610
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  33381576 tcaaaagggtcttataattagggacggaggtagta 33381610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 34012520 - 34012554
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  34012520 tcaaaagggtcttataattagggacggaggtagta 34012554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 34979080 - 34979114
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||| |||||||||||||||||||||||||||    
T  34979080 tcaaaagagtcttataattagggacggagggagta 34979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 36646640 - 36646674
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||| |||||||||||||||||||||    
T  36646640 tcaaaagggtcttctaattagggacggagggagta 36646674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 36711301 - 36711335
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  36711301 tcaaaagggtcttataattaggaacggagggagta 36711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 44547460 - 44547426
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  44547460 tcaaaaaggtcttataattagggacggagggagta 44547426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 45907279 - 45907245
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||| ||||||||||||||||||||||||    
T  45907279 tcaaaagggtattataattagggacggagggagta 45907245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 9140536 - 9140577
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaa 50  Q
    |||||||||||||||||||||||||||||  |||| ||||||    
T  9140536 tcaaaagggtcttataattagggacggagatagtatttaaaa 9140577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 29177025 - 29176992
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||| |||||||||||||    
T  29177025 caaaagggtcttataattagagacggagggagta 29176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 31769335 - 31769364
Alignment:
Q  9 tcaaaagggtcttataattagggacggagg 38  Q
    ||||||||||||||||||||||||||||||    
T  31769335 tcaaaagggtcttataattagggacggagg 31769364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 32643760 - 32643797
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  32643760 tcaaaagggtcttataattaggaacggaggtagtaatt 32643797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000005; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 2944275 - 2944312
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2944275 tcaaaagggtcttataattagggacggagggagtaatt 2944312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 1774376 - 1774340
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  1774376 tcaaaagggtcttataattagggacggagggagtaat 1774340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 28192178 - 28192214
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  28192178 tcaaaagggtcttataattagggacggagggagtaat 28192214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 51098 - 51133
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  51098 tcaaaagggtcttataattagggacggagggagtaa 51133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 39029212 - 39029177
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  39029212 tcaaaagggtcttataattagggacggagggagtaa 39029177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 44251124 - 44251163
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  44251124 tcaaaatggtcttataattagggacggagggagtaattaa 44251163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 8251936 - 8251970
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  8251936 tcaaaagggtcttataattagggacggagggagta 8251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 8951431 - 8951465
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  8951431 tcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 13153962 - 13153928
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  13153962 tcaaaagggtcttataattagggacggagggagta 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 17856779 - 17856813
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagta 17856813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 18754178 - 18754144
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  18754178 tcaaaagggtcttataattagggacggagggagta 18754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 26016603 - 26016569
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  26016603 tcaaaagggtcttataattagggacggagggagta 26016569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 28572080 - 28572046
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  28572080 tcaaaagggtcttataattagggacggagggagta 28572046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 28579673 - 28579639
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  28579673 tcaaaagggtcttataattagggacggagggagta 28579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 32675760 - 32675794
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  32675760 tcaaaagggtcttataattagggacggagggagta 32675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 34568524 - 34568490
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  34568524 tcaaaagggtcttataattagggacggagggagta 34568490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 42885088 - 42885054
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 9035542 - 9035579
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9035542 tcaaaatggtcttataattagggacggagggagtaatt 9035579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 29279460 - 29279493
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagta 29279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 36177106 - 36177143
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  36177106 tcaaaagagtcttataattagggacggagggagtaatt 36177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 40530410 - 40530443
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagta 40530443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 44250892 - 44250859
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagta 44250859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 8948354 - 8948390
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8948354 tcaaaagggtcttataattagggacggatggagtaat 8948390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 16999030 - 16998994
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16999030 tcaaaagggtcttataattatggacggagggagtaat 16998994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 17336453 - 17336413
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaa 49  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  17336453 tcaaaagggtcttataattagggacggatgtagtaattaaa 17336413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 18455752 - 18455720
Alignment:
Q  11 aaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||    
T  18455752 aaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 44502654 - 44502618
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||| ||||||||||||||||||||||||||||    
T  44502654 tcaaaaggatcttataattagggacggagggagtaat 44502618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 6050558 - 6050593
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  6050558 tcaaaagggtcttataattagggacggaggtagtaa 6050593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 18641383 - 18641418
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  18641383 tcaaaagggtcttataattagggacggaggtagtaa 18641418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 44888714 - 44888675
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  44888714 tcaaaagggtcttataattagggacggaggtagtagttaa 44888675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 45283796 - 45283831
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45283796 caaaagggtcttataattagggacggaggtagtaat 45283831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 2152243 - 2152277
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  2152243 tcaaaagggtcttataattagggacggaggtagta 2152277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 5162338 - 5162304
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  5162338 tcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 5593455 - 5593421
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  5593455 tcaaaagggtcttataattagggacggaaggagta 5593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 7758912 - 7758946
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||| |||||||||||||||||||||||||||    
T  7758912 tcaaaagtgtcttataattagggacggagggagta 7758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 8251705 - 8251667
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  8251705 caaaagggtcttatatatagggacggagggagtaattaa 8251667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 11798639 - 11798605
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||| |||||||||    
T  11798639 tcaaaagggtcttataattagggacagagggagta 11798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 12802645 - 12802611
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  12802645 tcaaaagggtcttataattagggacggaggtagta 12802611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 17069847 - 17069881
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  17069847 tcaaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 17578426 - 17578392
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  17578426 tcaaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 23487098 - 23487064
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  23487098 tcaaaagggtcttataattagggacggaggtagta 23487064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 23688168 - 23688202
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  23688168 tcaaaagggtcttataattagggacggaggtagta 23688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 26016831 - 26016865
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  26016831 tcaaaagggtcctataattagggacggagggagta 26016865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 28965730 - 28965764
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||| |||||    
T  28965730 tcaaaagggtcttataattagggacggagagagta 28965764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 29598258 - 29598224
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  29598258 tcaaaagggtcttataattagagacggagggagta 29598224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 38878755 - 38878721
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  38878755 tcaaaagggtcttataattagagacggagggagta 38878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 39029439 - 39029473
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  39029439 tcaaaagggtcctataattagggacggagggagta 39029473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 40529341 - 40529307
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  40529341 tcaaaaggatcttataattagggacggagggagta 40529307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 40741299 - 40741265
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||| ||||||||||||||||||||||||    
T  40741299 tcaaaagggtattataattagggacggagggagta 40741265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 43654206 - 43654240
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||| |||||||||||||||||||||||||||    
T  43654206 tcaaaagagtcttataattagggacggagggagta 43654240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 12255127 - 12255094
Alignment:
Q  12 aaagggtcttataattagggacggagggagtaat 45  Q
    ||||| ||||||||||||||||||||||||||||    
T  12255127 aaaggatcttataattagggacggagggagtaat 12255094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 12260670 - 12260637
Alignment:
Q  12 aaagggtcttataattagggacggagggagtaat 45  Q
    ||||| ||||||||||||||||||||||||||||    
T  12260670 aaaggatcttataattagggacggagggagtaat 12260637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 17856550 - 17856517
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||| ||||||||||||||    
T  17856550 caaaagggtcttataattaaggacggagggagta 17856517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 18111979 - 18112012
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||| ||||    
T  18111979 caaaagggtcttataattagggacggaggtagta 18112012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 19176170 - 19176133
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  19176170 tcaaaagggtcttataattaaggacggaggtagtaatt 19176133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 28864280 - 28864247
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||| ||||||||||    
T  28864280 caaaagggtcttataattagggatggagggagta 28864247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 32475231 - 32475264
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||| |||||||||    
T  32475231 caaaagggtcttataattagggacagagggagta 32475264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 40741528 - 40741561
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||| ||||||||||||||||||||||||||||    
T  40741528 caaaatggtcttataattagggacggagggagta 40741561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 40785154 - 40785183
Alignment:
Q  9 tcaaaagggtcttataattagggacggagg 38  Q
    ||||||||||||||||||||||||||||||    
T  40785154 tcaaaagggtcttataattagggacggagg 40785183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 11847835 - 11847871
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagtaat 11847871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 231108 - 231143
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  231108 tcaaaagggtcttataattagggacggagggagtaa 231143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 34301835 - 34301870
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  34301835 tcaaaagggtcttataattagggacggagggagtaa 34301870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 4844434 - 4844400
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  4844434 tcaaaagggtcttataattagggacggagggagta 4844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 8743222 - 8743188
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  8743222 tcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 9038676 - 9038642
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  9038676 tcaaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 23398142 - 23398176
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  23398142 tcaaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 30248681 - 30248647
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  30248681 tcaaaagggtcttataattagggacggagggagta 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 925936 - 925973
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||| |||||||||||||||    
T  925936 tcaaaagggtcttataattaggaacggagggagtaatt 925973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 9388562 - 9388529
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  9388562 caaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 34741730 - 34741763
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagta 34741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 1147272 - 1147308
Alignment:
Q  11 aaaagggtcttataattagggacggagggagtaatta 47  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1147272 aaaagggtcttataattagggacggatggagtaatta 1147308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 12144043 - 12144075
Alignment:
Q  11 aaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||    
T  12144043 aaaagggtcttataattagggacggagggagta 12144075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 2090692 - 2090657
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  2090692 tcaaaagggtcttataattagggacggaggtagtaa 2090657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 16272971 - 16273010
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  16272971 tcaaaagggtcttataattagggacggaggaagtatttaa 16273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 287417 - 287451
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  287417 tcaaaaaggtcttataattagggacggagggagta 287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 402624 - 402658
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  402624 tcaaaagggtcttataattagggacggaggtagta 402658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 1730104 - 1730138
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  1730104 tcaaaaggatcttataattagggacggagggagta 1730138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 5457446 - 5457412
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  5457446 tcaaaaaggtcttataattagggacggagggagta 5457412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 6418135 - 6418169
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaa 44  Q
    ||||| |||||||||||||||||||||||||||||    
T  6418135 caaaaaggtcttataattagggacggagggagtaa 6418169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 9388794 - 9388828
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  9388794 tcaaaaaggtcttataattagggacggagggagta 9388828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 10195996 - 10196030
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  10195996 tcaaaagggtcttataattagagacggagggagta 10196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 13321329 - 13321363
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  13321329 tcaaaagggtcttataattagggacggaggtagta 13321363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 13647902 - 13647868
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||| ||||||||||||||||    
T  13647902 tcaaaagggtcttataataagggacggagggagta 13647868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 13648132 - 13648166
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||| ||||||||||||||    
T  13648132 tcaaaagggtcttataattaaggacggagggagta 13648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 13901675 - 13901641
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  13901675 tcaaaagggtcttataattagggacggaggtagta 13901641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 15498663 - 15498629
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  15498663 tcaaaagggtcttataattagggacggaggtagta 15498629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 16122517 - 16122551
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  16122517 tcaaaagggtcttataattagggacggaggtagta 16122551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 19097804 - 19097838
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||| |||||||||||||    
T  19097804 tcaaaagggtcttataattagagacggagggagta 19097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 23604494 - 23604460
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  23604494 tcaaaagggtcttataattagggacggaggtagta 23604460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 25045646 - 25045680
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  25045646 tcaaaagggtcttataattagggacggaggtagta 25045680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 25197186 - 25197152
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  25197186 tcaaaaggatcttataattagggacggagggagta 25197152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 31091479 - 31091445
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  31091479 tcaaaagggtcttataattagggacggaggtagta 31091445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 33487867 - 33487833
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  33487867 tcaaaaaggtcttataattagggacggagggagta 33487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 34915546 - 34915580
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  34915546 tcaaaagggtcttataattagggacggaggtagta 34915580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 1779817 - 1779784
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||| ||||||||||||||||||||||||||    
T  1779817 caaaaggatcttataattagggacggagggagta 1779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 13866626 - 13866593
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||| ||||    
T  13866626 caaaagggtcttataattagggacggaggtagta 13866593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 17227530 - 17227559
Alignment:
Q  9 tcaaaagggtcttataattagggacggagg 38  Q
    ||||||||||||||||||||||||||||||    
T  17227530 tcaaaagggtcttataattagggacggagg 17227559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 23282808 - 23282849
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaa 50  Q
    |||||||||||||||| ||||||||||||| ||||| |||||    
T  23282808 tcaaaagggtcttatatttagggacggaggtagtaaataaaa 23282849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 23397912 - 23397879
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||| ||||||||||||||||||||||||||||    
T  23397912 caaaatggtcttataattagggacggagggagta 23397879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 943640 - 943676
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  943640 tcaaaagggtcttataattagggacggagggagtaat 943676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 15811235 - 15811271
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  15811235 tcaaaagggtcttataattagggacggagggagtaat 15811271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 30290299 - 30290263
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  30290299 tcaaaagggtcttataattagggacggagggagtaat 30290263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 39363197 - 39363233
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  39363197 tcaaaagggtcttataattagggacggagggagtaat 39363233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 44646535 - 44646571
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagtaatt 44646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 44649663 - 44649627
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  44649663 tcaaaagggtcttataattagggacggagggagtaat 44649627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 44649893 - 44649929
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagtaatt 44649929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 49907055 - 49907019
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  49907055 tcaaaagggtcttataattagggacggagggagtaat 49907019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 39497697 - 39497732
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagtaat 39497732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 1039384 - 1039418
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  1039384 tcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 1046290 - 1046324
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  1046290 tcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 4102717 - 4102751
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  4102717 tcaaaagggtcttataattagggacggagggagta 4102751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 11741431 - 11741397
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  11741431 tcaaaagggtcttataattagggacggagggagta 11741397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 23542013 - 23541979
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  23542013 tcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 36694888 - 36694854
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  36694888 tcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 36710989 - 36710955
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  36710989 tcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 37951722 - 37951684
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  37951722 caaaagggtcatataattagggacggagggagtaattaa 37951684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 37951952 - 37951986
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  37951952 tcaaaagggtcttataattagggacggagggagta 37951986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 38920273 - 38920239
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  38920273 tcaaaagggtcttataattagggacggagggagta 38920239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 39497467 - 39497433
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  39497467 tcaaaagggtcttataattagggacggagggagta 39497433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 45039446 - 45039412
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  45039446 tcaaaagggtcttataattagggacggagggagta 45039412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 46075870 - 46075904
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  46075870 tcaaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 52431177 - 52431211
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  52431177 tcaaaagggtcttataattagggacggagggagta 52431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 1048025 - 1047992
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagta 1047992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 9202278 - 9202245
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagta 9202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 14171576 - 14171539
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  14171576 tcaaaagggtcttataattagagacggagggagtaatt 14171539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 30289865 - 30289898
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagt 42  Q
    ||||||||||||||||||||||||||||||||||    
T  30289865 tcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 39362967 - 39362934
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagta 39362934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 39750154 - 39750121
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||||||    
T  39750154 caaaagggtcttataattagggacggagggagta 39750121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 21631110 - 21631146
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  21631110 tcaaaagggtcttataattagggacggaggtagtaat 21631146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 36695118 - 36695154
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36695118 tcaaaagggtcttataattagggacagagggagtaat 36695154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 36711219 - 36711255
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36711219 tcaaaagggtcttataattagggacagagggagtaat 36711255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 42872337 - 42872373
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||| ||||||||||||||||||||||    
T  42872337 tcaaaagggtcttacaattagggacggagggagtaat 42872373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 44646305 - 44646269
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||| ||||||||    
T  44646305 tcaaaagggtcttataattagggacggaaggagtaat 44646269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 52602023 - 52601991
Alignment:
Q  11 aaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||    
T  52602023 aaaagggtcttataattagggacggagggagta 52601991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 13343807 - 13343776
Alignment:
Q  9 tcaaaagggtcttataattagggacggaggga 40  Q
    ||||||||||||||||||||||||||||||||    
T  13343807 tcaaaagggtcttataattagggacggaggga 13343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 16456666 - 16456635
Alignment:
Q  13 aagggtcttataattagggacggagggagtaa 44  Q
    ||||||||||||||||||||||||||||||||    
T  16456666 aagggtcttataattagggacggagggagtaa 16456635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 16576094 - 16576129
Alignment:
Q  8 atcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||| |||||||||||||||||||||||||||    
T  16576094 atcaaaagagtcttataattagggacggagggagta 16576129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 25227339 - 25227304
Alignment:
Q  8 atcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||||| ||||    
T  25227339 atcaaaagggtcttataattagggacggaggtagta 25227304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 27037533 - 27037568
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  27037533 tcaaaagggtcttataattagggacggaggtagtaa 27037568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 38613739 - 38613774
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  38613739 tcaaaagggtcttataattagggacggaggtagtaa 38613774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 45039676 - 45039711
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaat 45  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45039676 caaaagggtcttataattagggacggaggaagtaat 45039711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 45335919 - 45335884
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||| |||||||||||    
T  45335919 tcaaaagggtcttataattagggagggagggagtaa 45335884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 4280129 - 4280163
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  4280129 tcaaaagggtcttataattagggacggaggtagta 4280163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 5765764 - 5765726
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatta 47  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  5765764 tcaaaagggtcatataattagggacggaggtagtaatta 5765726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 7763752 - 7763786
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  7763752 tcaaaagggtcttataattagggacggaggtagta 7763786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 7784025 - 7783991
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||| ||||||||||||||||||||||||    
T  7784025 tcaaaagggtattataattagggacggagggagta 7783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 8104291 - 8104325
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||| |||||||||||||||||||||||||||||    
T  8104291 tcaaaggggtcttataattagggacggagggagta 8104325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 9413328 - 9413362
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  9413328 tcaaaagggtcttataattagggacggaggtagta 9413362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 14171793 - 14171827
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  14171793 tcaaaagggtcctataattagggacggagggagta 14171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 17483767 - 17483733
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  17483767 tcaaaagggtcttataattagggacggaggtagta 17483733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 25509243 - 25509209
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  25509243 tcaaaagggtcttataattagggacggaggtagta 25509209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 27037303 - 27037269
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  27037303 tcaaaagggtcttataattagggacggaggtagta 27037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 28885876 - 28885842
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  28885876 tcaaaagggtcttataattagggacggaggtagta 28885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 39750384 - 39750418
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||| |||||||||    
T  39750384 tcaaaagggtcttataattagggacagagggagta 39750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 41317627 - 41317593
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  41317627 tcaaaagggtcttataattagggacggaggtagta 41317593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 41855476 - 41855510
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||| ||||||    
T  41855476 tcaaaagggtcttataattagggacggatggagta 41855510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 42276164 - 42276198
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  42276164 tcaaaagggtcttataattagggacggaggtagta 42276198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 43456624 - 43456658
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  43456624 tcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 5765994 - 5766027
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||| ||||    
T  5765994 caaaagggtcttataattagggacggaggtagta 5766027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 7784258 - 7784291
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||| |||||||||||||||||||||||||||    
T  7784258 caaaagagtcttataattagggacggagggagta 7784291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 12814790 - 12814831
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaaaa 50  Q
    |||||| ||||||||||||| ||||||||| |||||||||||    
T  12814790 tcaaaatggtcttataattatggacggaggtagtaattaaaa 12814831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 15811005 - 15810972
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||| ||||||    
T  15811005 caaaagggtcttataattagggacggatggagta 15810972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 30289635 - 30289602
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    |||||| |||||||||||||||||||||||||||    
T  30289635 caaaagagtcttataattagggacggagggagta 30289602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 35984435 - 35984402
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||| ||||||    
T  35984435 caaaagggtcttataattagggacggaaggagta 35984402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 38261374 - 38261337
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  38261374 tcaaaagggtcttataattaaggacggaggtagtaatt 38261337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 47069052 - 47069085
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||| ||||||    
T  47069052 caaaagggtcttataattagggacggatggagta 47069085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 48067898 - 48067935
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  48067898 tcaaaagggtcttataattagagacggaggtagtaatt 48067935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 3785 - 3819
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  3785 tcaaaagggtcttataattagggacggagggagta 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 3559 - 3522
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaatt 46  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  3559 tcaaaagggtcctataattagggacggagggagtaatt 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 12099 - 12065
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  12099 tcaaaagggtcttataattagggacggagggagta 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 12328 - 12361
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||| ||||||||||||||||||||||||    
T  12328 caaaagggttttataattagggacggagggagta 12361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 51685 - 51719
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  51685 tcaaaagggtcttataattagggacggagggagta 51719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 65411 - 65377
Alignment:
Q  10 caaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagtaa 65377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 65640 - 65674
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||| ||||||||||||||||||||||||||||    
T  65640 tcaaaaaggtcttataattagggacggagggagta 65674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 47674 - 47640
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  47674 tcaaaagggtcttataattagggacggagggagta 47640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 47904 - 47937
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||| ||||||||||||||||||||||||||    
T  47904 caaaaggatcttataattagggacggagggagta 47937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 259125 - 259159
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  259125 tcaaaagggtcttataattagggacggagggagta 259159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 355334 - 355368
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||||||||    
T  355334 tcaaaagggtcttataattagggacggagggagta 355368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 5185 - 5149
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5185 tcaaaagggtcttataattagggacggaggtagtaat 5149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 10185 - 10221
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  10185 tcaaaagggtcttataattagggacggaggtagtaat 10221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 8252 - 8216
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8252 tcaaaagggtcttacaattagggacggagggagtaat 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 18531 - 18495
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  18531 tcaaaagggtcttataattagggacggaggtagtaat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 18759 - 18793
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  18759 tcaaaagggtcttataattagggacggaggtagta 18793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 3472 - 3436
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaat 45  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3472 tcaaaagggtcttataattagggacggaggtagtaat 3436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 7143 - 7178
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  7143 tcaaaagggtcttataattagggacggaggaagtaa 7178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 14351 - 14390
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaattaa 48  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  14351 tcaaaagggtcttataattaaggacggagggagtacttaa 14390  T

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Target: scaffold0107 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 48688 - 48653
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagtaa 44  Q
    |||||||||||||||||||||||||||||| |||||    
T  48688 tcaaaagggtcttataattagggacggaggtagtaa 48653  T

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Target: scaffold0163 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 1449 - 1483
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  1449 tcaaaagggtcttataattagggacggaggtagta 1483  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 164248 - 164214
Alignment:
Q  9 tcaaaagggtcttataattagggacggagggagta 43  Q
    |||||||||||||||||||||||||||||| ||||    
T  164248 tcaaaagggtcttataattagggacggaggtagta 164214  T

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Target: scaffold0237 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 6613 - 6646
Alignment:
Q  10 caaaagggtcttataattagggacggagggagta 43  Q
    ||||||||||||||||||||||||||||| ||||    
T  6613 caaaagggtcttataattagggacggaggtagta 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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