View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1634_high_22 (Length: 310)
Name: NF1634_high_22
Description: NF1634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1634_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 34 - 302
Target Start/End: Original strand, 22363435 - 22363702
Alignment:
| Q |
34 |
tgattaactaatataaacaaagagaggaaaagcatagttatgaaagatagtaatataaatacctctacggacaaatatgatcaaattggagtcgagatac |
133 |
Q |
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| T |
22363435 |
tgattaactaatataaacaaagagaggaaaagcttagttatgaaagatagtaatctaa-tacctctacggacaaatatgatcaaattggagtcaagatac |
22363533 |
T |
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| Q |
134 |
tgaggaatgaacaaggatcttggttccatattaagcaaaccaatgtgcatgtgcctatccaaaaacctatcatcattgtttttaaacaacctcaattctc |
233 |
Q |
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| T |
22363534 |
tgaggaatggaacaggatcttggttccatattaagcaaaccaatgtgcatgtgcctatccaaaaacctatcatcattgtttttaaacaacctcaattctc |
22363633 |
T |
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| Q |
234 |
ctgcatgagttttgacaacactctttgagttttgcatcaagaataagtttgatgatgacccttcttctc |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22363634 |
ctgcatgagttttgacaacactctttgagttttgcatcaagaataagtttgatgatgacccttcttctc |
22363702 |
T |
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