View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1634_high_29 (Length: 254)
Name: NF1634_high_29
Description: NF1634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1634_high_29 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 7 - 238
Target Start/End: Complemental strand, 31040521 - 31040290
Alignment:
| Q |
7 |
gagtgagatgaaactttataattttattttaataaaaatgagttagcctcaatattaaaataaaataaagaactaatatgctattacatgggccactcaa |
106 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31040521 |
gagtgaaatgaaactttataattttattttaataaaaatgagttagcctcaatattaaaataaaataaagaactaatatgctattacatgggccactcaa |
31040422 |
T |
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| Q |
107 |
caaaatattagagaatcaggcccagtaacaatcatcaccttatttttgtgagtcggtttgtaaaatgatttaagctcaatataaaacctatattttattt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31040421 |
caaaatattagagaatcaggcccagtaacaatcatcaccttatttttgtgagtcggtttgtaaaatgatttaagctcaatataaaacctatattttattt |
31040322 |
T |
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| Q |
207 |
taatttcccatttagccacaggaatgaatact |
238 |
Q |
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|||||||| ||||||||||||||||||||||| |
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| T |
31040321 |
taatttccaatttagccacaggaatgaatact |
31040290 |
T |
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