View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1634_low_14 (Length: 380)
Name: NF1634_low_14
Description: NF1634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1634_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 2343246 - 2343598
Alignment:
| Q |
10 |
gcagagacctcaaaatatgttgtgatgtgaccacaattatggttatatactacaatttaaaaccatgagtccaataataaagttttaaaggactctgtga |
109 |
Q |
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| T |
2343246 |
gcagagacctcaaaatatgttgtgatgtgaccacaattatgtttacagactacaatttaaaaccatgactccaataataaagttttaaaggactctgtga |
2343345 |
T |
|
| Q |
110 |
tgacatcgcaatcacaattacagtcgcatggtttctaattgtaagtattttgtcacaataaagtttgtagcacgaccgcaactgcaatttaaaacacgaa |
209 |
Q |
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|||||| |||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2343346 |
tgacattgcaaccacaatcacagtcgcatgggttctaattgtgagtattttgtcacaataaagtttgtagcacgaccgcaactgcaatttaaaacacgaa |
2343445 |
T |
|
| Q |
210 |
taaaatcgattacctttttatgatataaagagataaaagagagtatgagagatttaccttgttgaaagtgttgaggtggaaaagaagggaaggtgttgag |
309 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2343446 |
taaaatcgattaactttttatgatataaagagataaaagagagtatgagagatttaccttgttgaaagtgttgaggtggaaaagaagggaaggtgttgag |
2343545 |
T |
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| Q |
310 |
agaagttgaagggagttgatcatgatcttcatgagggttaaacatgaaactat |
362 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2343546 |
agaagttgaagggagttgatcatgatcttcatgagggttaaacatgaaactat |
2343598 |
T |
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