View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1634_low_37 (Length: 214)
Name: NF1634_low_37
Description: NF1634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1634_low_37 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 6887757 - 6887970
Alignment:
| Q |
1 |
tatggatttgagtgatagaataattacaaaggaaaagggaatcaatgttgggatgtatctgactttatgcggatgtgaaaagctcaatcagtgatttctt |
100 |
Q |
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| T |
6887757 |
tatggatttgagtgatagaataattacaaaggaaaagggaatcaatgttgggatgtatctgactttatgcggatgtgaaaagctcaatcagtgatttctt |
6887856 |
T |
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| Q |
101 |
gagttagtttattttctgtctgatagaatgtcagtgaagtagtggatagggaaatgagctatctcactttattccatgcaatcaacaatttctcgcattc |
200 |
Q |
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| T |
6887857 |
gagttagtttattttctgtctgatagaatgtcagtgaagtagtggatagggaaatgagctatctcactttattccatgcaatcaacaatttctcgcattc |
6887956 |
T |
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| Q |
201 |
acgcagtctagaca |
214 |
Q |
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||||||| |||||| |
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| T |
6887957 |
acgcagtttagaca |
6887970 |
T |
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