View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16351_low_8 (Length: 224)
Name: NF16351_low_8
Description: NF16351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16351_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 48649573 - 48649770
Alignment:
| Q |
12 |
ataatactaactatattactctgtctcttattatatctcagagatactgataagtagtaacgtgcacccaaatatttttgttagtgagtgatcatcatca |
111 |
Q |
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| T |
48649573 |
ataatactaactatattactctgtctcttattatatctcagagatactaataagtagtaacgtgcacccaaatatttttgttagtgagtgatcatcatca |
48649672 |
T |
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| Q |
112 |
ttcatcaaattccttctttcttatagactgactagttagtattaattagtagcagccgggtgaaccaactgatatttagagagatcaatcaattagat |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
48649673 |
ttcatcaaattccttctttcttatagactgactagttagtattaattagtagcagccgggtgaaccaactgatatttagagagatcaatcaaatagat |
48649770 |
T |
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