View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16354_high_1 (Length: 335)
Name: NF16354_high_1
Description: NF16354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16354_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 2 - 322
Target Start/End: Original strand, 6029676 - 6029996
Alignment:
| Q |
2 |
atctttagttctcttatttattcatggcctaattaatctcttatcaacaccattggcagatggattatataaactttacgtgatctggtgactgtgatca |
101 |
Q |
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| T |
6029676 |
atctatagttttcttatttattcatggcctaattaatctcttatcaacaccattggcagatggattatataaactttacgtgatctggtgactgtgatca |
6029775 |
T |
|
| Q |
102 |
aataaagatgatgtagtttgacattggattgagaattgagatctataaaggacatcaatgaggatgccactcttaagctttcttctaagagctagagtgt |
201 |
Q |
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| T |
6029776 |
aataaagatgatgtagtttgacattggattgagaattgagatctataaacgacatcaatgaggatgccacccttaagctttcttctaagagctagagtgt |
6029875 |
T |
|
| Q |
202 |
tgagatcaaatggacatatttcctatcatatttttccttctatttggacttgtttgaaactcaagttctccattgtcaaggaacatgggcagtgacttta |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6029876 |
tgagatcaaatggacatatttcctatcatatttttccttctatttggacttgtttgaaactcaagttctccattgtcaaggaacatgggcagtgacttta |
6029975 |
T |
|
| Q |
302 |
ttgacaagaccgtttcttttc |
322 |
Q |
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||||||||||||||||||||| |
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| T |
6029976 |
ttgacaagaccgtttcttttc |
6029996 |
T |
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