View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16355_low_14 (Length: 275)
Name: NF16355_low_14
Description: NF16355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16355_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 45 - 264
Target Start/End: Original strand, 33567008 - 33567224
Alignment:
| Q |
45 |
attaaagagtattccggaggccggacgannnnnnngttaatgtgcagacttgtaaataaacttattctaacaccaaacaaacctatgtatgcttgcgcgt |
144 |
Q |
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| T |
33567008 |
attaaagagtacttcggaggccggacgatttttttgttaatgtgcagacttgtaaataaacttattctaacaccaaacaaacctatgtatgcttgcgcgt |
33567107 |
T |
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| Q |
145 |
tgagcggtcctcctcctctcattttcatgctcctgttagctactgcttgctttcacaagtcacaactataagctccttcctccaatcttccctctctcca |
244 |
Q |
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| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33567108 |
tttgc---cctcctcctctcattttcatgctcctgttagctactgcttgctttcacaagtcacaactataagctccttcctccaatcttccctctctcca |
33567204 |
T |
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| Q |
245 |
actccactttcttctttcat |
264 |
Q |
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|||||||||||||||||||| |
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| T |
33567205 |
actccactttcttctttcat |
33567224 |
T |
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